Gene_name Full_name Chromosome Start End Strand Length Gene_type Genecards Near_circRNA Detection_frequency Expression_rank Specific_exression_tissue Specificity_score Sample_group Diff_group Validation plot RP4-717I23.2 NA chr1 93278961 93279129 - 169 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-717I23.2 NA 0.047 20-30% Nerve 4.906892038 CRC,PAAD NA NA boxplot BEND3P2 BEN domain containing 3 pseudogene 2 chr9 92171241 92173494 + 2254 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=BEND3P2 NA 0.059 40-50% NA NA Breast_cancer,Normal,PAAD NA NA boxplot AC137723.5 NA chr17 81941869 81947601 + 5733 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC137723.5 NA 0.024 20-30% NA NA PAAD NA NA boxplot AC009404.2 NA chr2 117833937 117841658 + 7722 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC009404.2 NA 0.282 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot FLJ20021 uncharacterized LOC90024 chr4 101347780 101348883 + 1104 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FLJ20021 NA 0.741 20-30% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP4-737E23.7 NA chr20 23180176 23187544 + 7369 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-737E23.7 NA 0.012 70-80% NA NA Breast_cancer,CRC NA NA boxplot CTD-2369P2.5 NA chr19 10252268 10285108 - 32841 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2369P2.5 NA 0.188 60-70% Testis 1.363361233 CRC,HCC,Normal,PAAD NA NA boxplot RRS1-AS1 RRS1 antisense RNA 1 (head to head) chr8 66419589 66428977 - 9389 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RRS1-AS1 NA 0.129 10-20% NA NA Breast_cancer,CRC,Normal NA NA boxplot RP11-536K7.5 NA chr10 6025978 6036427 + 10450 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-536K7.5 NA 0.024 20-30% NA NA HCC,Normal NA NA boxplot RP11-248C1.4 NA chr10 89786610 89787107 + 498 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-248C1.4 NA 0.012 70-80% NA NA Breast_cancer NA NA boxplot RP11-384F7.1 NA chr3 118004819 118557668 - 552850 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-384F7.1 NA 0.047 40-50% Testis 4.70355993 Breast_cancer,CRC,HCC,PAAD NA NA boxplot RP11-196G11.6 NA chr16 31056460 31062803 + 6344 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-196G11.6 NA 0.047 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CPHL1P ceruloplasmin and hephaestin-like 1 pseudogene chr3 149229356 149291800 - 62445 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CPHL1P NA 0.153 30-40% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-152P23.2 NA chr16 8847650 8848724 - 1075 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-152P23.2 NA 0.2 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot WASH5P WAS protein family homolog 5 pseudogene chr19 60951 71626 - 10676 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=WASH5P NA 0.447 20-30% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD PAAD(up) NA boxplot CBX3P9 chromobox 3 pseudogene 9 chr6 116453014 116453565 - 552 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CBX3P9 NA 0.906 10-20% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot AC005042.2 NA chr2 158548425 158549224 + 800 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC005042.2 exo_circ_053554 0.094 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-797A18.6 NA chr15 77067654 77068325 - 672 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-797A18.6 NA 0.129 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-382D8.3 NA chr1 235336806 235337087 + 282 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-382D8.3 NA 0.012 80-90% NA NA Normal NA NA boxplot RP11-171I2.2 NA chr2 178578790 178580906 + 2117 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-171I2.2 NA 0.4 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CTB-176F20.3 NA chr19 23323968 23329101 + 5134 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTB-176F20.3 NA 0.024 20-30% NA NA Breast_cancer,HCC,Normal NA NA boxplot RP11-6B6.3 NA chr1 205625483 205626153 + 671 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-6B6.3 NA 0.012 80-90% NA NA Normal NA NA boxplot RP3-430A16.1 NA chr6 4774526 4775408 - 883 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-430A16.1 NA 0.012 60-70% Testis 4.906892038 Normal NA NA boxplot RP11-399E6.1 NA chr1 41242373 41284861 + 42489 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-399E6.1 NA 0.035 80-90% Testis 4.152200645 Breast_cancer,Normal NA NA boxplot RP11-478J18.2 NA chr1 213983793 213986419 - 2627 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-478J18.2 NA 0.012 90-100% NA NA Breast_cancer NA NA boxplot GTF2IP7 NA chr7 76090431 76108779 - 18349 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GTF2IP7 NA 0.282 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot DGKZP1 diacylglycerol kinase, zeta pseudogene 1 chr13 43968424 43971199 + 2776 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DGKZP1 NA 1 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down) NA boxplot PHF2P2 PHD finger protein 2 pseudogene 2 chr13 18946755 19062718 - 115964 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PHF2P2 NA 0.012 90-100% NA NA Breast_cancer,CRC,Normal NA NA boxplot AC011816.1 NA chr3 36880184 36880729 - 546 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC011816.1 NA 0.024 60-70% NA NA CRC,Normal NA NA boxplot MTCO3P23 MT-CO3 pseudogene 23 chr15 58150275 58150563 + 289 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MTCO3P23 NA 0.024 90-100% NA NA Normal NA NA boxplot UFL1-AS1 UFL1 antisense RNA 1 chr6 96358374 96521669 - 163296 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=UFL1-AS1 NA 0.212 50-60% Testis 3.878857433 CRC,HCC,Normal NA NA boxplot RPS7P4 ribosomal protein S7 pseudogene 4 chr1 68242474 68243055 - 582 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPS7P4 NA 0.059 90-100% NA NA Breast_cancer,CHD,HCC,Normal,PAAD NA NA boxplot AC013470.6 NA chr7 12471352 12472545 + 1194 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC013470.6 NA 0.047 90-100% Testis 4.906892038 CRC,HCC,PAAD NA NA boxplot RP11-169D4.3 NA chr11 72551049 72551919 - 871 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-169D4.3 NA 0.012 20-30% NA NA PAAD NA NA boxplot RP11-382A20.4 NA chr15 83179182 83439445 + 260264 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-382A20.4 NA 0.506 10-20% Muscle 1.848130217 Breast_cancer,CRC,HCC,Normal,PAAD CRC(up) NA boxplot RP1-102E24.1 NA chr12 6409637 6410013 - 377 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-102E24.1 NA 0.012 80-90% NA NA NA NA NA boxplot AC009120.11 NA chr16 74289593 74291052 - 1460 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC009120.11 NA 0.024 50-60% NA NA PAAD NA NA boxplot RP11-103B5.4 NA chr12 117002463 117003152 + 690 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-103B5.4 NA 0.118 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot AF064858.6 NA chr21 38863676 38956467 - 92792 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AF064858.6 NA 0.082 50-60% Liver 2.46765875 Breast_cancer,CRC,HCC,PAAD NA NA boxplot AP000936.5 NA chr11 117117794 117119181 - 1388 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AP000936.5 NA 0.012 90-100% NA NA CRC NA NA boxplot RP11-170K4.2 NA chr3 158869898 158871821 + 1924 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-170K4.2 NA 0.365 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-359P5.1 NA chr5 123036271 123054667 + 18397 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-359P5.1 NA 0.071 80-90% NA NA Breast_cancer,CRC,Normal,PAAD NA NA boxplot RP11-973N13.2 NA chr14 64600243 64601644 - 1402 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-973N13.2 NA 0.847 10-20% Testis 4.906892038 Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),PAAD(down) NA boxplot CTC-575N7.1 NA chr5 129500361 129905917 - 405557 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-575N7.1 NA 0.047 60-70% NA NA HCC NA NA boxplot PPIAP11 peptidylprolyl isomerase A (cyclophilin A) pseudogene 11 chr5 82009602 82010094 - 493 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PPIAP11 NA 0.906 40-50% NA NA CHD,CRC,HCC,Normal,PAAD CHD(up) NA boxplot RP11-518L10.5 NA chr1 244375100 244409592 - 34493 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-518L10.5 NA 0.024 70-80% Testis 4.906892038 CRC,Normal NA NA boxplot RPS21P1 ribosomal protein S21 pseudogene 1 chr1 235432985 235433231 + 247 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPS21P1 NA 0.059 80-90% NA NA CRC,HCC,Normal NA NA boxplot PYY2 peptide YY, 2 (pseudogene) chr17 28226563 28228065 + 1503 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PYY2 NA 0.024 70-80% Adrenal Gland 2.048290664 Breast_cancer,PAAD NA NA boxplot CTD-2357A8.3 NA chr17 78617389 78632057 - 14669 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2357A8.3 NA 0.224 30-40% Testis 1.919700619 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CTC-338M12.5 NA chr5 181191924 181194429 + 2506 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-338M12.5 NA 0.271 30-40% Testis 1.300073633 CRC,HCC,Normal,PAAD NA NA boxplot LINC00886 long intergenic non-protein coding RNA 886 chr3 156747346 156817062 - 69717 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00886 NA 0.624 20-30% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CRC(down),HCC(down) NA boxplot RP11-1348G14.8 NA chr16 28822431 28823969 - 1539 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1348G14.8 NA 0.447 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CTC-510F12.2 NA chr19 11203628 11216168 + 12541 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-510F12.2 NA 0.165 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot EIF2S2P3 eukaryotic translation initiation factor 2 subunit 2 beta pseudogene 3 chr10 92668745 92669743 - 999 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=EIF2S2P3 exo_circ_039629,exo_circ_046756 0.824 30-40% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-10J21.4 NA chr8 141252286 141253292 - 1007 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-10J21.4 NA 0.212 50-60% Testis 1.223257015 CRC,HCC,Normal,PAAD NA NA boxplot RP11-161H23.9 NA chr12 49292631 49324576 - 31946 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-161H23.9 NA 0.071 50-60% Testis 1.887425435 Breast_cancer,CRC,HCC,Normal NA NA boxplot RP11-577H5.1 NA chr7 102755146 102755939 + 794 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-577H5.1 NA 0.094 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP5-875O13.1 NA chr1 16533886 16536172 - 2287 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-875O13.1 NA 0.071 70-80% NA NA Breast_cancer,HCC,Normal NA NA boxplot RP11-333E13.2 NA chr4 39973128 39973442 - 315 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-333E13.2 NA 0.271 70-80% NA NA CRC,HCC,Normal,PAAD NA NA boxplot AC114730.11 NA chr2 241724615 241725693 - 1079 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC114730.11 NA 0.094 70-80% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot RP11-752L20.5 NA chr4 147567606 147594587 + 26982 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-752L20.5 NA 0.024 10-20% Testis 3.983916334 Breast_cancer,PAAD NA NA boxplot HNRNPA1P52 heterogeneous nuclear ribonucleoprotein A1 pseudogene 52 chr19 41829692 41830938 + 1247 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HNRNPA1P52 NA 0.012 40-50% Whole Blood 3.904300323 Breast_cancer,Normal NA NA boxplot RP11-32B5.1 NA chr15 21293653 21295201 - 1549 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-32B5.1 NA 0.529 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CTA-217C2.2 NA chr22 45155539 45156011 - 473 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTA-217C2.2 NA 0.094 30-40% NA NA CRC,Normal,PAAD NA NA boxplot CTD-2145A24.5 NA chr17 18809956 18810940 + 985 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2145A24.5 NA 0.153 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-182N22.9 NA chr9 35038625 35044326 - 5702 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-182N22.9 NA 0.165 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-321E2.6 NA chr5 17498231 17498825 + 595 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-321E2.6 NA 0.012 90-100% NA NA NA NA NA boxplot AC012531.25 NA chr12 54019910 54022589 + 2680 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC012531.25 NA 0.047 0-10% NA NA Breast_cancer,HCC,PAAD NA NA boxplot RP11-576E20.1 NA chr4 17171757 17186059 - 14303 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-576E20.1 NA 0.012 10-20% Testis 4.906892038 Breast_cancer,PAAD NA NA boxplot RP11-286N22.16 NA chr11 61525708 61526602 - 895 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-286N22.16 NA 0.012 30-40% NA NA Breast_cancer,HCC NA NA boxplot AC129778.2 NA chr9 40497850 40566779 + 68930 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC129778.2 NA 0.071 80-90% NA NA CRC,HCC,PAAD NA NA boxplot RP13-638C3.3 NA chr17 82587313 82588411 - 1099 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP13-638C3.3 NA 0.012 20-30% Testis 1.624755859 Breast_cancer,PAAD NA NA boxplot RP11-90M2.5 NA chr13 48041751 48042184 - 434 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-90M2.5 NA 0.035 80-90% NA NA CRC,Normal,PAAD NA NA boxplot CARD8-AS1 CARD8 antisense RNA 1 chr19 48255675 48258199 + 2525 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CARD8-AS1 NA 1 0-10% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot AC004063.1 NA chr4 104556960 104568877 + 11918 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC004063.1 NA 0.118 70-80% Testis 4.906892038 CRC,HCC,Normal NA NA boxplot CTD-2306A12.1 NA chr15 45702640 45703183 + 544 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2306A12.1 NA 0.012 70-80% NA NA Normal NA NA boxplot XX-C283C717.1 NA chr22 50314631 50316008 + 1378 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=XX-C283C717.1 NA 0.024 70-80% NA NA Breast_cancer,CRC,HCC NA NA boxplot CTD-2319I12.5 NA chr17 60135762 60140081 - 4320 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2319I12.5 NA 0.024 60-70% Lung 2.611880386 Normal NA NA boxplot RCN1P2 reticulocalbin 1 pseudogene 2 chr13 45390353 45391267 - 915 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RCN1P2 NA 0.718 20-30% NA NA CHD,CRC,HCC,Normal,PAAD PAAD(up) NA boxplot RP11-317J9.1 NA chr2 191154118 191156070 - 1953 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-317J9.1 NA 0.035 50-60% NA NA CRC,HCC,PAAD NA NA boxplot PRYP4 PTPN13-like, Y-linked pseudogene 4 chrY 25975549 25988069 + 12521 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PRYP4 NA 0.012 80-90% NA NA HCC NA NA boxplot GTF2IP22 general transcription factor IIi pseudogene 22 chr14 20173632 20173813 - 182 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GTF2IP22 NA 0.024 90-100% NA NA HCC,Normal NA NA boxplot OR10AC1 olfactory receptor family 10 subfamily AC member 1 (gene/pseudogene) chr7 143510933 143511911 - 979 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=OR10AC1 NA 0.012 90-100% NA NA Breast_cancer,Normal NA NA boxplot KRT18P29 keratin 18 pseudogene 29 chr2 181961212 181962478 - 1267 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KRT18P29 NA 0.094 80-90% NA NA Breast_cancer,HCC,Normal NA NA boxplot RP11-8L18.2 NA chr10 34675635 34676041 - 407 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-8L18.2 NA 0.035 10-20% Skin 4.906892038 Normal,PAAD NA NA boxplot RP11-763B22.3 NA chr1 144418678 144419190 + 513 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-763B22.3 NA 0.059 80-90% Brain 4.906892038 Breast_cancer,Normal,PAAD NA NA boxplot SNRPGP10 small nuclear ribonucleoprotein polypeptide G pseudogene 10 chr1 205351247 205351471 + 225 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SNRPGP10 NA 1 0-10% Ovary 2.138478906 CHD,CRC,HCC,Normal,PAAD CHD(down) NA boxplot CTD-2647E9.1 NA chr15 49794246 49796097 + 1852 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2647E9.1 NA 0.271 80-90% Testis 2.149115374 CRC,HCC,Normal,PAAD NA NA boxplot OR2T11 olfactory receptor family 2 subfamily T member 11 (gene/pseudogene) chr1 248626178 248627128 - 951 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=OR2T11 NA 0.024 50-60% Testis 4.906892038 Breast_cancer,CRC NA NA boxplot AC007256.5 NA chr2 201410544 201413308 - 2765 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC007256.5 NA 0.776 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down),HCC(down) NA boxplot RP11-38H17.1 NA chr8 77399072 77537290 + 138219 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-38H17.1 NA 0.012 20-30% NA NA HCC NA NA boxplot CTB-3M24.1 NA chr5 133574829 133575298 - 470 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTB-3M24.1 NA 0.035 20-30% NA NA PAAD NA NA boxplot RALY-AS1 RALY antisense RNA 1 chr20 33983052 33994357 - 11306 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RALY-AS1 NA 0.329 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC092651.1 NA chr2 87118534 87120980 - 2447 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC092651.1 NA 0.235 80-90% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CACNA1C-AS1 CACNA1C antisense RNA 1 chr12 2676001 2691200 - 15200 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CACNA1C-AS1 NA 0.2 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-59H7.3 NA chr15 59121034 59133250 + 12217 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-59H7.3 NA 0.012 50-60% NA NA Breast_cancer NA NA boxplot AC009303.2 NA chr2 118014174 118015673 + 1500 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC009303.2 NA 0.282 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CTD-2384B11.2 NA chr5 76691439 76716215 - 24777 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2384B11.2 NA 0.224 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-115C10.1 NA chr11 126652852 126682104 + 29253 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-115C10.1 NA 0.094 30-40% Liver 3.470434992 CRC,HCC NA NA boxplot RP11-197N18.7 NA chr12 123081384 123084744 + 3361 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-197N18.7 NA 0.059 30-40% Testis 3.751745173 Breast_cancer,CRC,HCC,Normal NA NA boxplot RP11-762H8.1 NA chr15 78293286 78296049 + 2764 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-762H8.1 NA 0.012 30-40% NA NA Normal NA NA boxplot ST13P2 suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein) pseudogene 2 chr2 187825341 187826449 + 1109 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ST13P2 NA 0.012 70-80% Lung 4.906892038 HCC NA NA boxplot EIF4EP2 eukaryotic translation initiation factor 4E pseudogene 2 chr17 49424269 49424922 - 654 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=EIF4EP2 NA 1 0-10% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-568N6.1 NA chr2 64522187 64524093 - 1907 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-568N6.1 NA 0.741 10-20% Testis 2.006695348 Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down) NA boxplot RP3-466I7.1 NA chr6 108387512 108388080 + 569 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-466I7.1 NA 0.035 50-60% Testis 4.906892038 Normal NA NA boxplot RP11-111F5.1 NA chr9 62357834 62358140 - 307 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-111F5.1 NA 0.012 90-100% NA NA PAAD NA NA boxplot LIMS1-AS1 LIMS1 antisense RNA 1 chr2 108676795 108678601 - 1807 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LIMS1-AS1 NA 0.012 0-10% NA NA Normal NA NA boxplot AC005351.1 NA chr5 145997218 145998003 + 786 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC005351.1 NA 0.012 30-40% NA NA Breast_cancer NA NA boxplot RP11-618M23.3 NA chr8 19277284 19277573 + 290 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-618M23.3 NA 0.012 20-30% NA NA Breast_cancer,Normal NA NA boxplot RP11-562A8.1 NA chr15 50466738 50467096 + 359 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-562A8.1 NA 0.118 40-50% NA NA Breast_cancer,CRC,Normal NA NA boxplot SRPK2P SRSF protein kinase 2 pseudogene chr8 62863082 62864181 - 1100 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SRPK2P NA 0.165 80-90% NA NA HCC,Normal,PAAD NA NA boxplot RP11-96A1.5 NA chr4 120035033 120040615 - 5583 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-96A1.5 NA 0.035 80-90% Testis 4.729927186 HCC NA NA boxplot RP4-669L17.10 NA chr1 365389 501617 - 136229 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-669L17.10 NA 0.788 10-20% NA NA CRC,HCC,Normal,PAAD CRC(up),HCC(up),PAAD(up) NA boxplot RP5-878I13.2 NA chrX 115454733 115455194 - 462 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-878I13.2 NA 0.047 60-70% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot RP1-40E16.11 NA chr6 3138394 3153062 - 14669 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-40E16.11 exo_circ_044465 0.129 70-80% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CIRBP-AS1 CIRBP antisense RNA 1 chr19 1267814 1270241 - 2428 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CIRBP-AS1 NA 0.082 50-60% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot HERC2P7 hect domain and RLD 2 pseudogene 7 chr15 23289303 23293667 - 4365 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HERC2P7 NA 0.165 30-40% NA NA CHD,CRC,HCC,PAAD NA NA boxplot RP11-1103G16.1 NA chr14 30437992 30573629 - 135638 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1103G16.1 NA 0.024 90-100% Testis 4.906892038 PAAD NA NA boxplot RP11-216N14.7 NA chr1 153852106 153853414 - 1309 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-216N14.7 NA 0.282 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC073283.4 NA chr2 47192405 47345074 - 152670 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC073283.4 exo_circ_048764 0.118 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-141M1.3 NA chr13 33355206 33676768 - 321563 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-141M1.3 exo_circ_034228 0.271 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot DUXAP2 double homeobox A pseudogene 2 chr8 101366417 101367005 - 589 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DUXAP2 NA 0.024 0-10% Testis 4.906892038 HCC,PAAD NA NA boxplot LINC00374 long intergenic non-protein coding RNA 374 chr13 58211697 58233117 - 21421 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00374 NA 0.012 0-10% Testis 4.906892038 PAAD NA NA boxplot AC007349.7 NA chr7 36838972 36841373 + 2402 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC007349.7 NA 0.035 40-50% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot HCG15 HLA complex group 15 (non-protein coding) chr6 28986203 28987484 + 1282 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HCG15 NA 0.047 10-20% NA NA Breast_cancer,Normal,PAAD NA NA boxplot LINC01478 long intergenic non-protein coding RNA 1478 chr18 44323436 44531697 - 208262 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01478 NA 0.2 40-50% NA NA Breast_cancer,CHD,CRC,HCC,Normal NA NA boxplot TPM3P7 tropomyosin 3 pseudogene 7 chr2 25809925 25810656 - 732 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TPM3P7 NA 0.188 20-30% Testis 4.025166543 CRC,HCC,Normal,PAAD NA NA boxplot RP11-531A24.5 NA chr8 73052178 73063061 + 10884 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-531A24.5 NA 0.282 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-1212A22.1 NA chr16 18334400 18352476 - 18077 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1212A22.1 NA 0.918 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(up),HCC(up),PAAD(up) NA boxplot LINC00536 long intergenic non-protein coding RNA 536 chr8 115950511 116325059 - 374549 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00536 NA 0.035 10-20% Testis 3.483927641 Breast_cancer,PAAD NA NA boxplot RP11-376N17.4 NA chr1 84344678 84349939 + 5262 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-376N17.4 NA 0.035 90-100% Testis 3.154595549 CRC,Normal NA NA boxplot RP11-439M15.1 NA chr15 22480439 22484840 - 4402 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-439M15.1 NA 0.294 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot WI2-87327B8.2 uncharacterized LOC105372712 chr20 62596732 62603115 - 6384 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=WI2-87327B8.2 NA 0.224 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot PBX2P1 pre-B-cell leukemia homeobox 2 pseudogene 1 chr3 143176327 143177617 + 1291 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PBX2P1 NA 0.929 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down),CRC(down) NA boxplot SEMA3F-AS1 SEMA3F antisense RNA 1 chr3 50116022 50156085 - 40064 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SEMA3F-AS1 NA 0.388 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot RP11-627G18.1 NA chr18 22200619 22205229 - 4611 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-627G18.1 NA 0.082 10-20% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot RP11-245J24.1 NA chr10 118241564 118267710 + 26147 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-245J24.1 NA 0.012 70-80% NA NA Breast_cancer,HCC NA NA boxplot RP4-803J11.2 NA chr1 229319403 229323087 + 3685 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-803J11.2 NA 0.118 30-40% NA NA Breast_cancer,CRC,Normal NA NA boxplot RP11-197M22.2 NA chr10 16721352 16748377 - 27026 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-197M22.2 exo_circ_018726 0.212 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-793H13.8 NA chr12 53441741 53467528 + 25788 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-793H13.8 NA 0.929 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot ARL2BPP10 ADP ribosylation factor like GTPase 2 binding protein pseudogene 10 chr22 18102457 18103649 - 1193 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ARL2BPP10 NA 0.012 80-90% NA NA HCC NA NA boxplot RP11-21C4.1 NA chr8 64574306 64581888 - 7583 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-21C4.1 NA 0.012 90-100% NA NA Breast_cancer,HCC NA NA boxplot RP11-83B20.7 NA chr12 124593181 124593691 - 511 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-83B20.7 NA 0.012 90-100% NA NA Breast_cancer,CRC NA NA boxplot RPS27P22 ribosomal protein S27 pseudogene 22 chr12 22722229 22722469 + 241 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPS27P22 NA 0.012 90-100% NA NA NA NA NA boxplot HMGB1P9 high mobility group box 1 pseudogene 9 chr2 218200434 218201388 + 955 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HMGB1P9 NA 0.035 40-50% NA NA CHD,HCC,Normal NA NA boxplot GYG2P1 glycogenin 2 pseudogene 1 chrY 12354416 12420456 - 66041 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GYG2P1 NA 0.118 10-20% NA NA CRC,HCC,Normal,PAAD NA NA boxplot LINC01218 long intergenic non-protein coding RNA 1218 chr4 100812255 100814280 - 2026 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01218 NA 0.612 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(up),PAAD(up) NA boxplot RP11-676J12.4 NA chr17 763565 765319 - 1755 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-676J12.4 NA 0.035 80-90% NA NA CRC,Normal NA NA boxplot HEXDC-IT1 HEXDC intronic transcript 1 chr17 82425498 82427310 + 1813 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HEXDC-IT1 NA 0.071 70-80% NA NA Breast_cancer,CRC,Normal NA NA boxplot RPS11P5 ribosomal protein S11 pseudogene 5 chr12 132825701 132826184 + 484 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPS11P5 NA 0.659 70-80% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-246K15.1 NA chr8 57492884 57591559 + 98676 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-246K15.1 NA 0.024 20-30% Prostate 3.726185654 Normal NA NA boxplot CTD-2049O17.1 NA chr5 63301523 63302056 + 534 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2049O17.1 exo_circ_004014 0.024 60-70% NA NA CRC,HCC NA NA boxplot RP11-909N17.2 NA chr8 143412749 143417054 + 4306 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-909N17.2 NA 0.035 40-50% NA NA Breast_cancer,Normal,PAAD NA NA boxplot LINC01080 long intergenic non-protein coding RNA 1080 chr13 80011077 80028283 + 17207 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01080 NA 0.012 80-90% NA NA Breast_cancer,PAAD NA NA boxplot ADAMTS7P1 ADAMTS7 pseudogene 1 chr15 82298553 82334609 + 36057 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ADAMTS7P1 NA 0.106 80-90% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-325O24.6 NA chr6 127664554 127681555 + 17002 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-325O24.6 NA 0.012 90-100% NA NA NA NA NA boxplot GUSBP5 glucuronidase, beta pseudogene 5 chr4 143559472 143649305 + 89834 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GUSBP5 exo_circ_024667 0.235 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-244N20.7 NA chr9 133338990 133339465 + 476 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-244N20.7 NA 0.024 40-50% NA NA Normal NA NA boxplot MATN1-AS1 MATN1 antisense RNA 1 chr1 30718504 30726827 + 8324 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MATN1-AS1 NA 0.494 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot KIAA0196-AS1 KIAA0196 antisense RNA 1 chr8 125040684 125044989 + 4306 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KIAA0196-AS1 NA 0.071 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP4-800G7.3 NA chr7 149275619 149277992 - 2374 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-800G7.3 NA 0.012 60-70% NA NA Breast_cancer NA NA boxplot FTH1P26 ferritin, heavy polypeptide 1 pseudogene 26 chr6 133676729 133677429 - 701 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FTH1P26 NA 0.012 90-100% NA NA NA NA NA boxplot RP11-386M24.4 NA chr15 92715710 92734195 - 18486 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-386M24.4 NA 0.741 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),PAAD(down) NA boxplot RP11-336N8.4 NA chr9 78219120 78219357 + 238 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-336N8.4 NA 0.059 70-80% NA NA CRC,PAAD NA NA boxplot CH17-262O2.2 NA chr1 145507444 145508607 + 1164 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CH17-262O2.2 NA 0.012 50-60% NA NA CRC NA NA boxplot CTC-276P9.4 NA chr5 135034521 135035894 + 1374 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-276P9.4 NA 0.024 80-90% NA NA Breast_cancer,PAAD NA NA boxplot CTD-2227I18.1 NA chr5 56059050 56067372 + 8323 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2227I18.1 NA 0.035 70-80% NA NA CRC,HCC,Normal NA NA boxplot CTC-303L1.2 NA chr5 94611906 94618122 - 6217 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-303L1.2 NA 0.082 30-40% NA NA HCC,Normal,PAAD NA NA boxplot CTD-3203P2.1 NA chr16 27213308 27214993 - 1686 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-3203P2.1 NA 0.318 20-30% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot RP11-472I20.6 NA chr11 43733761 43734564 + 804 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-472I20.6 NA 0.035 80-90% NA NA CRC,Normal,PAAD NA NA boxplot GAPDHP47 glyceraldehyde 3 phosphate dehydrogenase pseudogene 47 chr3 143503275 143504273 - 999 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GAPDHP47 NA 0.094 80-90% NA NA CRC,HCC,Normal NA NA boxplot RP11-440L14.1 NA chr4 762387 781849 - 19463 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-440L14.1 NA 0.682 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),HCC(down) NA boxplot DGUOK-AS1 DGUOK antisense RNA 1 chr2 73947642 73981441 - 33800 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DGUOK-AS1 NA 0.376 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CTD-2530H12.4 NA chr11 75583196 75594665 + 11470 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2530H12.4 NA 0.153 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC002064.7 NA chr7 90345873 90346218 - 346 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC002064.7 NA 0.012 10-20% NA NA HCC NA NA boxplot SEPT14P9 NA chr9 138286248 138286430 + 183 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SEPT14P9 NA 0.235 80-90% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CTC-360G5.9 NA chr19 38935297 38938632 - 3336 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-360G5.9 NA 0.047 10-20% NA NA HCC,PAAD NA NA boxplot RP11-196B3.1 NA chr18 79420836 79422780 + 1945 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-196B3.1 NA 0.118 70-80% NA NA Breast_cancer,CRC,Normal,PAAD NA NA boxplot RP11-295P9.12 NA chr10 13675646 13675990 + 345 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-295P9.12 NA 0.035 60-70% NA NA Normal NA NA boxplot AC105760.3 NA chr2 237048599 237056167 - 7569 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC105760.3 NA 0.047 30-40% Testis 3.204790782 Breast_cancer,Normal,PAAD NA NA boxplot RHOXF1-AS1 RHOXF1 antisense RNA 1 chrX 120036236 120146854 + 110619 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RHOXF1-AS1 NA 0.106 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP5-837I24.6 NA chr1 81505099 81506296 + 1198 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-837I24.6 NA 0.012 90-100% Testis 4.906892038 HCC,Normal NA NA boxplot RP11-401O9.3 NA chr17 10320392 10341458 + 21067 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-401O9.3 exo_circ_057462 0.094 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-86A5.1 NA chrX 25878339 25893544 + 15206 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-86A5.1 NA 0.012 90-100% NA NA Breast_cancer NA NA boxplot EEF1B2P7 eukaryotic translation elongation factor 1 beta 2 pseudogene 7 chr2 232729523 232730198 - 676 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=EEF1B2P7 NA 0.024 40-50% NA NA Normal,PAAD NA NA boxplot RP11-567L7.5 NA chr17 59400488 59403303 - 2816 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-567L7.5 NA 0.059 20-30% NA NA HCC,Normal NA NA boxplot USP30-AS1 USP30 antisense RNA 1 chr12 109052350 109053952 - 1603 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=USP30-AS1 NA 0.929 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up) NA boxplot RP11-29A19.2 NA chr10 1290018 1293002 - 2985 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-29A19.2 NA 0.012 10-20% NA NA Breast_cancer,PAAD NA NA boxplot CTD-2526M8.3 NA chr18 57136322 57146998 - 10677 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2526M8.3 NA 0.012 70-80% Testis 4.906892038 Breast_cancer,PAAD NA NA boxplot AC008060.5 NA chr7 155510283 155518623 + 8341 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC008060.5 exo_circ_055411 0.012 30-40% NA NA Breast_cancer,CRC NA NA boxplot SERBP1P6 SERPINE1 mRNA binding protein 1 pseudogene 6 chr5 42465400 42468868 - 3469 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SERBP1P6 NA 0.965 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot AGAP2-AS1 AGAP2 antisense RNA 1 chr12 57726271 57728356 + 2086 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AGAP2-AS1 NA 0.659 20-30% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-20G6.1 NA chr16 23061767 23062232 + 466 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-20G6.1 NA 0.012 80-90% NA NA Normal NA NA boxplot ABHD17AP1 abhydrolase domain containing 17A pseudogene 1 chr1 148146395 148149566 + 3172 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ABHD17AP1 NA 1 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up),HCC(up) NA boxplot RP11-563J2.2 NA chr10 6277687 6335982 + 58296 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-563J2.2 NA 0.282 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CTA-280A3.2 NA chr22 47916728 47926264 + 9537 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTA-280A3.2 NA 0.035 10-20% NA NA Breast_cancer,PAAD NA NA boxplot CTD-2349P21.5 NA chr17 30729469 30731202 + 1734 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2349P21.5 NA 0.024 80-90% NA NA Breast_cancer,CRC NA NA boxplot NPAP1P4 nuclear pore associated protein 1 pseudogene 4 chr9 80357029 80360338 - 3310 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NPAP1P4 NA 0.024 20-30% Testis 4.707935121 Breast_cancer,Normal NA NA boxplot ILF3-AS1 ILF3 antisense RNA 1 (head to head) chr19 10651862 10653844 - 1983 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ILF3-AS1 NA 0.953 0-10% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-681N23.1 NA chr18 13919603 13919923 - 321 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-681N23.1 NA 0.012 90-100% NA NA Normal,PAAD NA NA boxplot AC079305.11 NA chr2 176990508 177164516 - 174009 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC079305.11 NA 0.035 30-40% NA NA CRC,HCC,Normal NA NA boxplot LHFPL3-AS2 LHFPL3 antisense RNA 2 chr7 104894628 104926645 - 32018 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LHFPL3-AS2 NA 0.118 10-20% NA NA CHD,HCC,Normal,PAAD NA NA boxplot RP11-345K20.2 NA chr10 73422259 73422696 - 438 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-345K20.2 NA 0.259 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot STX18-IT1 STX18 intronic transcript 1 chr4 4476121 4481700 - 5580 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=STX18-IT1 NA 0.047 50-60% Testis 4.906892038 Breast_cancer,CRC,Normal,PAAD NA NA boxplot RP11-110I1.6 NA chr11 119044188 119045493 + 1306 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-110I1.6 NA 0.294 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot KB-1460A1.2 NA chr8 101128987 101133486 + 4500 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KB-1460A1.2 NA 0.471 20-30% Testis 4.322889334 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-462G12.1 NA chr16 3947609 3950444 - 2836 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-462G12.1 NA 0.082 30-40% NA NA Breast_cancer,CRC,Normal,PAAD NA NA boxplot RP11-1084A12.1 NA chr15 34085911 34086314 - 404 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1084A12.1 NA 0.035 60-70% NA NA CRC,Normal NA NA boxplot AC015933.2 NA chr18 27954519 27963687 + 9169 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC015933.2 NA 0.059 90-100% NA NA HCC,Normal NA NA boxplot TRIM60P14 tripartite motif containing 60 pseudogene 14 chr4 164915565 164916983 + 1419 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TRIM60P14 NA 0.106 90-100% Testis 4.906892038 CRC,HCC,Normal,PAAD NA NA boxplot PPP3CB-AS1 PPP3CB antisense RNA 1 (head to head) chr10 73495525 73520070 + 24546 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PPP3CB-AS1 exo_circ_050676 0.965 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-662I13.3 NA chr12 24902309 24904681 + 2373 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-662I13.3 NA 0.059 60-70% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot KRT8P51 keratin 8 pseudogene 51 chr7 136938280 136938553 - 274 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KRT8P51 NA 0.012 90-100% Testis 3.943036409 HCC NA NA boxplot RP11-351I21.11 NA chr8 12412827 12414373 + 1547 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-351I21.11 NA 0.247 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-61O1.1 NA chr14 98068240 98205143 - 136904 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-61O1.1 NA 0.082 30-40% Testis 4.906892038 Normal,PAAD NA NA boxplot AC010132.11 NA chr7 42918741 42920084 + 1344 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC010132.11 NA 0.024 70-80% NA NA CRC,Normal,PAAD NA NA boxplot BCAP31P2 B-cell receptor-associated protein 31 pseudogene 2 chr16 32869985 32873128 + 3144 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=BCAP31P2 NA 0.059 90-100% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-445N20.2 NA chr7 149881477 149882105 + 629 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-445N20.2 NA 0.035 80-90% NA NA Breast_cancer,CRC,Normal NA NA boxplot HMGB1P37 high mobility group box 1 pseudogene 37 chr9 121519816 121520424 - 609 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HMGB1P37 NA 0.059 90-100% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-443B20.1 NA chr2 24825610 24826717 + 1108 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-443B20.1 NA 0.424 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot AC012074.2 NA chr2 25369136 25375845 - 6710 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC012074.2 NA 0.188 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC007064.24 NA chr22 16869478 16871126 + 1649 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC007064.24 NA 0.024 40-50% NA NA Breast_cancer,PAAD NA NA boxplot RP3-522P13.3 NA chr6 25245356 25261411 - 16056 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-522P13.3 NA 0.553 10-20% Testis 4.906892038 Breast_cancer,CRC,HCC,Normal,PAAD CRC(up) NA boxplot RP11-394B2.1 NA chr16 70661667 70665836 + 4170 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-394B2.1 NA 0.447 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-348P10.2 NA chr3 44667412 44669364 + 1953 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-348P10.2 NA 0.435 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP3-389A20.2 NA chrX 17769005 17769398 - 394 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-389A20.2 NA 0.035 60-70% NA NA CRC,Normal NA NA boxplot RP11-109N23.1 NA chr14 72963645 72964008 - 364 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-109N23.1 NA 0.012 90-100% NA NA CRC NA NA boxplot C5orf60 chromosome 5 open reading frame 60 chr5 179641544 179645046 - 3503 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=C5orf60 NA 0.024 80-90% Testis 4.782096069 Breast_cancer,PAAD NA NA boxplot RP11-794P6.6 NA chr11 111514043 111526755 - 12713 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-794P6.6 NA 0.012 90-100% Testis 4.906892038 Breast_cancer,Normal NA NA boxplot CTD-2620I22.3 NA chr19 53007512 53013180 + 5669 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2620I22.3 NA 0.024 20-30% NA NA Breast_cancer,Normal NA NA boxplot SEPHS1P4 selenophosphate synthetase 1 pseudogene 4 chrX 73769248 73770423 + 1176 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SEPHS1P4 NA 0.141 80-90% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CTD-2410N18.4 NA chr5 134205614 134371044 - 165431 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2410N18.4 exo_circ_038813,exo_circ_049453 0.918 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down),PAAD(down) NA boxplot RPL23AP7 ribosomal protein L23a pseudogene 7 chr2 113610502 113627090 - 16589 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL23AP7 NA 1 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down),CRC(up),HCC(up),PAAD(up) NA boxplot LINC01531 long intergenic non-protein coding RNA 1531 chr19 35399511 35419385 + 19875 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01531 NA 0.024 60-70% NA NA Breast_cancer,CRC,Normal NA NA boxplot AC096574.4 NA chr2 238231684 238255633 + 23950 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC096574.4 NA 0.094 70-80% Testis 1.905926334 Breast_cancer,CRC,HCC,PAAD NA NA boxplot LINC00686 long intergenic non-protein coding RNA 686 chr20 62695024 62700480 - 5457 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00686 NA 0.012 80-90% NA NA Breast_cancer,CRC NA NA boxplot RP11-60A14.1 NA chr1 87805286 87808372 - 3087 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-60A14.1 NA 0.082 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CCND2-AS1 CCND2 antisense RNA 1 chr12 4248765 4276184 - 27420 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CCND2-AS1 NA 0.188 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot XXbac-BPG170G13.31 NA chr6 29763258 29763392 - 135 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=XXbac-BPG170G13.31 NA 0.035 40-50% NA NA Normal,PAAD NA NA boxplot HOTTIP HOXA distal transcript antisense RNA chr7 27198575 27207259 + 8685 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HOTTIP NA 0.024 10-20% NA NA Breast_cancer,HCC,PAAD NA NA boxplot AC096649.2 NA chr2 175167904 175168522 + 619 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC096649.2 NA 0.118 70-80% Testis 4.906892038 CRC,HCC,Normal,PAAD NA NA boxplot RP11-986G18.3 NA chr12 2726400 2727050 - 651 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-986G18.3 NA 0.012 70-80% NA NA HCC NA NA boxplot RP11-950C14.10 NA chr14 75011269 75012851 - 1583 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-950C14.10 NA 0.106 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot BOLA3P4 bolA family member 3 pseudogene 4 chr9 32926051 32926450 + 400 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=BOLA3P4 NA 0.012 70-80% NA NA Normal NA NA boxplot GS1-279B7.2 NA chr1 185317779 185318530 + 752 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GS1-279B7.2 exo_circ_053131 0.176 70-80% NA NA CRC,HCC,Normal,PAAD NA NA boxplot SNRPGP3 small nuclear ribonucleoprotein polypeptide G pseudogene 3 chr7 129477875 129478101 + 227 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SNRPGP3 NA 0.012 50-60% Testis 4.393799132 NA NA NA boxplot RP11-91J19.2 NA chr8 486117 488512 - 2396 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-91J19.2 exo_circ_001557 0.059 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CTC-209L16.1 NA chr5 154729231 154729694 + 464 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-209L16.1 NA 0.024 90-100% NA NA Breast_cancer,CRC NA NA boxplot RP11-343K8.3 NA chr17 57912333 57922581 + 10249 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-343K8.3 NA 0.012 80-90% Testis 4.906892038 NA NA NA boxplot ZBTB20-AS1 ZBTB20 antisense RNA 1 chr3 114351811 114388978 + 37168 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ZBTB20-AS1 NA 0.224 40-50% Testis 4.417206787 CRC,HCC,Normal,PAAD NA NA boxplot SLC6A10P solute carrier family 6 (neurotransmitter transporter), member 10, pseudogene chr16 32877469 32885501 - 8033 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SLC6A10P NA 0.129 80-90% Testis 4.799162824 Breast_cancer,CHD,CRC,Normal,PAAD NA NA boxplot TMCC1-AS1 TMCC1 antisense RNA 1 (head to head) chr3 129893871 129918575 + 24705 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TMCC1-AS1 NA 0.541 10-20% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-664I21.6 NA chr11 124891304 124892126 + 823 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-664I21.6 NA 0.024 30-40% NA NA Normal NA NA boxplot RP11-57H14.4 NA chr10 112823490 112827726 + 4237 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-57H14.4 exo_circ_056022 0.859 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down) NA boxplot RP3-340N1.2 NA chr1 20154338 20160568 + 6231 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-340N1.2 NA 0.059 60-70% Testis 1.922648286 Breast_cancer,CRC,HCC NA NA boxplot ZNF295-AS1 ZNF295 antisense RNA 1 chr21 42009194 42024924 + 15731 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ZNF295-AS1 NA 0.012 90-100% Testis 3.881659895 Breast_cancer,Normal NA NA boxplot RP11-383J24.2 NA chr8 124301315 124301804 + 490 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-383J24.2 NA 0.047 50-60% NA NA Breast_cancer,HCC,Normal NA NA boxplot CTD-2534I21.8 NA chr17 44947912 44948939 + 1028 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2534I21.8 NA 0.024 40-50% Testis 4.302409441 CRC,Normal NA NA boxplot ENPP7P4 ectonucleotide pyrophosphatase/phosphodiesterase 7 pseudogene 4 chr3 125848223 125909372 + 61150 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ENPP7P4 NA 0.059 50-60% NA NA Breast_cancer,CHD,HCC,Normal,PAAD NA NA boxplot FAM106DP family with sequence similarity 106, member D, pseudogene chr17 60173322 60173822 + 501 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FAM106DP NA 0.012 30-40% Brain 4.906892038 Breast_cancer,Normal NA NA boxplot USP9YP32 ubiquitin specific peptidase 9, Y-linked pseudogene 32 chrY 17995201 17997252 - 2052 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=USP9YP32 NA 0.012 40-50% NA NA HCC NA NA boxplot RGS17P1 regulator of G-protein signaling 17 pseudogene 1 chr13 40992779 40993331 - 553 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RGS17P1 exo_circ_005076 0.376 40-50% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot NPM1P50 nucleophosmin 1 (nucleolar phosphoprotein B23, numatrin) pseudogene 50 chr11 75079265 75080131 - 867 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NPM1P50 NA 0.059 80-90% NA NA CRC,HCC,Normal NA NA boxplot CTD-2299I21.1 NA chr5 79000112 79001124 - 1013 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2299I21.1 NA 0.012 80-90% Liver 2.948221719 Breast_cancer NA NA boxplot RP4-794H19.1 NA chr1 58882868 58903747 - 20880 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-794H19.1 NA 0.282 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-256I9.3 NA chr16 65233056 65432820 + 199765 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-256I9.3 NA 0.012 30-40% NA NA Breast_cancer,HCC NA NA boxplot GS1-24F4.2 uncharacterized LOC100652791 chr8 6835554 6885276 + 49723 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GS1-24F4.2 NA 0.047 40-50% Testis 4.14027311 Breast_cancer,CRC,Normal,PAAD NA NA boxplot LINC01612 long intergenic non-protein coding RNA 1612 chr4 170273919 170283079 + 9161 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01612 NA 0.012 80-90% NA NA Breast_cancer,HCC NA NA boxplot RPS3P6 ribosomal protein S3 pseudogene 6 chr12 62021570 62022174 - 605 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPS3P6 NA 0.035 50-60% NA NA Breast_cancer,CRC,Normal NA NA boxplot DLEU1-AS1 DLEU1 antisense RNA 1 chr13 50520933 50527449 - 6517 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DLEU1-AS1 NA 0.024 70-80% NA NA CRC NA NA boxplot NANOGP3 Nanog homeobox pseudogene 3 chr6 53418452 53418737 - 286 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NANOGP3 NA 0.012 50-60% NA NA HCC NA NA boxplot BMS1P13 BMS1, ribosome biogenesis factor pseudogene 13 chr9 65828120 65831696 + 3577 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=BMS1P13 NA 0.447 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot AC008753.6 NA chr19 53854581 53869107 - 14527 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC008753.6 NA 0.129 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-79P5.10 NA chr5 73508685 73509254 + 570 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-79P5.10 NA 0.6 70-80% NA NA CRC,HCC,Normal,PAAD NA NA boxplot NALT1 NOTCH1 associated lncRNA in T-cell acute lymphoblastic leukemia 1 chr9 136546212 136549893 + 3682 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NALT1 NA 0.094 60-70% NA NA Breast_cancer,CRC,HCC,PAAD NA NA boxplot RP11-402J7.2 NA chr3 111633672 111635089 + 1418 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-402J7.2 NA 0.118 20-30% NA NA CRC,HCC,Normal NA NA boxplot RP11-520D19.2 NA chr3 81246579 81297345 - 50767 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-520D19.2 NA 0.094 70-80% NA NA CRC,HCC,Normal,PAAD NA NA boxplot LINC01079 long intergenic non-protein coding RNA 1079 chr13 27373348 27374366 + 1019 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01079 NA 0.012 0-10% Pancreas 4.274479174 Breast_cancer,Normal NA NA boxplot MME-AS1 MME antisense RNA 1 chr3 155158370 155183285 - 24916 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MME-AS1 NA 0.024 60-70% NA NA HCC,Normal,PAAD NA NA boxplot CH17-478G19.2 NA chr1 148772640 148784594 - 11955 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CH17-478G19.2 NA 0.306 70-80% NA NA CRC,HCC,Normal,PAAD NA NA boxplot SPATA31C1 SPATA31 subfamily C, member 1 chr9 87914493 87923505 + 9013 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SPATA31C1 NA 0.035 50-60% Testis 4.781282464 Breast_cancer,CRC,Normal NA NA boxplot AC015971.2 NA chr2 86562070 86618766 + 56697 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC015971.2 NA 0.553 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot MED28P3 mediator complex subunit 28 pseudogene 3 chr2 186364598 186365128 + 531 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MED28P3 NA 0.071 10-20% NA NA Normal,PAAD NA NA boxplot RP11-282A11.4 NA chr13 106903150 106904099 - 950 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-282A11.4 NA 0.012 70-80% NA NA Normal NA NA boxplot AP000320.6 NA chr21 34370802 34375348 - 4547 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AP000320.6 NA 0.059 30-40% Testis 3.254327586 CRC,HCC,Normal NA NA boxplot LINC00398 long intergenic non-protein coding RNA 398 chr13 30803206 30810645 + 7440 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00398 NA 0.047 60-70% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot AC005355.1 NA chr5 134436711 134492519 + 55809 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC005355.1 NA 0.012 90-100% NA NA Breast_cancer,CRC NA NA boxplot MIR3976HG MIR3976 host gene chr18 5748819 5876328 + 127510 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MIR3976HG NA 0.012 80-90% NA NA Breast_cancer,CRC NA NA boxplot RP11-85I17.2 NA chr8 119838736 119840385 - 1650 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-85I17.2 NA 0.035 0-10% NA NA Breast_cancer,CRC,PAAD NA NA boxplot SIRPG-AS1 SIRPG antisense RNA 1 chr20 1633508 1648472 + 14965 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SIRPG-AS1 NA 0.024 70-80% NA NA Breast_cancer,HCC,PAAD NA NA boxplot RP11-700P18.2 NA chr7 56304678 56305526 - 849 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-700P18.2 NA 0.718 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot NHEG1 neuroblastoma highly expressed 1 chr6 136982165 136993234 - 11070 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NHEG1 NA 0.024 10-20% NA NA HCC,Normal NA NA boxplot RP11-1070N10.3 NA chr14 95516136 95517911 + 1776 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1070N10.3 NA 0.6 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot HLA-F-AS1 HLA-F antisense RNA 1 chr6 29726601 29749049 - 22449 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HLA-F-AS1 NA 0.894 0-10% NA NA CHD,CRC,HCC,Normal,PAAD PAAD(up) NA boxplot MGC2752 NA chr19 58582024 58582609 + 586 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MGC2752 exo_circ_023187 0.647 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP13-228J13.5 NA chrX 155348752 155349799 + 1048 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP13-228J13.5 NA 0.424 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot AC004053.1 NA chr4 104490965 104697592 + 206628 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC004053.1 NA 0.106 10-20% NA NA CRC,HCC,Normal NA NA boxplot RP11-132A1.4 NA chr7 101308346 101310985 + 2640 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-132A1.4 NA 0.141 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD PAAD(up) NA boxplot RP11-266K4.1 NA chr12 8199599 8218911 - 19313 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-266K4.1 NA 0.024 10-20% NA NA Normal NA NA boxplot RP11-759A24.2 NA chr15 96294935 96298023 - 3089 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-759A24.2 NA 0.024 40-50% NA NA PAAD NA NA boxplot RP11-253M7.4 NA chr15 69458522 69461806 - 3285 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-253M7.4 NA 0.024 20-30% Testis 1.53416433 Normal,PAAD NA NA boxplot RP11-481A20.8 NA chr8 12025244 12025598 - 355 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-481A20.8 NA 0.012 60-70% NA NA Breast_cancer,HCC NA NA boxplot ATP6V1E1P1 ATPase, H+ transporting, lysosomal 31kDa, V1 subunit E1 pseudogene 1 chr1 42903232 42903912 + 681 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ATP6V1E1P1 NA 0.212 80-90% Testis 3.854292677 HCC,Normal,PAAD NA NA boxplot RP4-781B1.5 NA chr20 44746642 44747201 + 560 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-781B1.5 NA 0.012 60-70% NA NA Breast_cancer NA NA boxplot RP11-340F16.2 NA chr2 65790039 65793533 + 3495 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-340F16.2 NA 0.024 80-90% NA NA Breast_cancer,Normal NA NA boxplot RP11-248M19.1 NA chr18 79900555 79900903 - 349 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-248M19.1 NA 0.024 20-30% NA NA HCC,Normal,PAAD NA NA boxplot RP11-11C20.1 NA chr8 51721670 51722164 - 495 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-11C20.1 NA 0.012 90-100% Heart 4.906892038 Breast_cancer,CRC NA NA boxplot RP11-250B2.3 NA chr6 80443344 80465927 + 22584 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-250B2.3 NA 0.129 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot AFAP1-AS1 AFAP1 antisense RNA 1 chr4 7754090 7778928 + 24839 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AFAP1-AS1 NA 0.741 10-20% Ovary 1.446653207 Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down) NA boxplot CSAG3 CSAG family, member 3 chrX 152753921 152760222 + 6302 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CSAG3 NA 0.106 20-30% Testis 4.196792362 Breast_cancer,CHD,CRC,HCC,Normal NA NA boxplot RP11-112J1.1 NA chr14 58794654 58795029 + 376 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-112J1.1 NA 0.576 80-90% NA NA CRC,HCC,Normal,PAAD NA NA boxplot INGX inhibitor of growth family, X-linked (pseudogene) chrX 71491682 71492928 - 1247 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=INGX NA 0.082 20-30% NA NA Breast_cancer,CHD,CRC,HCC,Normal NA NA boxplot NLRP9P1 NA chr12 129013336 129016663 + 3328 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NLRP9P1 NA 0.094 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot DSCAS DSC1/DSC2 antisense RNA chr18 31101588 31162789 + 61202 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DSCAS NA 0.176 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-320P11.1 NA chr3 66008770 66009200 - 431 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-320P11.1 exo_circ_003712 0.012 20-30% NA NA NA NA NA boxplot AC009302.2 NA chr2 221944223 221944612 + 390 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC009302.2 NA 0.918 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down),PAAD(down) NA boxplot AL928768.3 NA chr14 105703961 105704602 - 642 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AL928768.3 NA 0.659 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down) NA boxplot SAP18P3 SAP18 pseudogene 3 chr3 20007852 20008247 - 396 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SAP18P3 NA 0.012 10-20% NA NA HCC NA NA boxplot RP11-578F21.9 NA chr15 28763440 28764151 - 712 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-578F21.9 NA 0.153 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP6-1O2.1 NA chrX 10242339 10365323 + 122985 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP6-1O2.1 NA 0.188 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CTD-2524L6.3 NA chr15 71818396 71823384 + 4989 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2524L6.3 NA 0.035 70-80% NA NA CRC,HCC,Normal,PAAD NA NA boxplot AL590763.16 NA chrX 71869763 71873295 - 3533 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AL590763.16 NA 0.012 40-50% NA NA Breast_cancer,HCC NA NA boxplot RP11-157I4.4 NA chr8 81439436 81521818 + 82383 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-157I4.4 NA 0.118 90-100% Testis 4.906892038 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CTA-221G9.7 NA chr22 25212742 25213685 + 944 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTA-221G9.7 NA 0.118 20-30% Testis 1.582715968 Breast_cancer,CRC,Normal,PAAD NA NA boxplot RARSP1 arginyl-tRNA synthetase pseudogene 1 chr12 27496937 27498589 + 1653 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RARSP1 NA 0.012 80-90% NA NA NA NA NA boxplot RP11-1281K21.1 NA chr4 49238032 49245419 - 7388 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1281K21.1 NA 0.035 60-70% Testis 4.906892038 CRC,Normal NA NA boxplot BIRC6-AS2 BIRC6 antisense RNA 2 chr2 32557520 32574818 - 17299 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=BIRC6-AS2 NA 0.012 90-100% NA NA HCC,Normal NA NA boxplot CTD-2057J6.1 NA chr5 29881709 29882945 - 1237 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2057J6.1 NA 0.012 90-100% Testis 4.906892038 Normal NA NA boxplot RP11-298I3.3 NA chr14 23005499 23007123 - 1625 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-298I3.3 NA 0.153 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot LINC00589 long intergenic non-protein coding RNA 589 chr8 29673922 29748109 - 74188 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00589 NA 0.071 50-60% NA NA Breast_cancer,HCC,Normal NA NA boxplot RP11-48B3.4 NA chr8 80541300 80543104 + 1805 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-48B3.4 NA 0.129 50-60% NA NA CRC,HCC,Normal NA NA boxplot LINC00870 long intergenic non-protein coding RNA 870 chr3 72151257 72174332 + 23076 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00870 NA 0.012 80-90% Liver 1.803913345 Breast_cancer,PAAD NA NA boxplot RP5-1050D4.4 NA chr17 4986466 4987324 + 859 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-1050D4.4 NA 0.082 70-80% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot RP11-321P16.1 NA chr20 48073869 48074188 + 320 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-321P16.1 NA 0.035 80-90% NA NA HCC NA NA boxplot AC006116.17 NA chr19 56314703 56341287 + 26585 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC006116.17 NA 0.4 30-40% Testis 1.904941744 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-800A18.3 NA chr18 79352458 79354567 + 2110 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-800A18.3 NA 0.094 60-70% NA NA CRC,Normal,PAAD NA NA boxplot DUSP5P1 dual specificity phosphatase 5 pseudogene 1 chr1 228650241 228651379 + 1139 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DUSP5P1 NA 0.047 20-30% NA NA CRC,HCC,PAAD NA NA boxplot FGF12-AS3 FGF12 antisense RNA 3 chr3 192516831 192521398 + 4568 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FGF12-AS3 NA 0.012 60-70% Pituitary 2.47096647 HCC NA NA boxplot RP11-776H12.1 NA chr1 60515716 60640491 - 124776 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-776H12.1 exo_circ_036798,exo_circ_014369 0.435 10-20% Prostate 1.816972366 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AP001350.4 NA chr11 58627435 58628528 + 1094 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AP001350.4 NA 0.129 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-206L10.9 NA chr1 778770 810060 + 31291 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-206L10.9 NA 0.306 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AP000347.2 NA chr22 23658094 23717356 - 59263 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AP000347.2 exo_circ_027008,exo_circ_052323 0.765 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(up),HCC(down),PAAD(up) NA boxplot AC005262.3 NA chr19 3118665 3119304 - 640 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC005262.3 NA 0.106 80-90% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CTD-2033D15.2 NA chr15 39586561 39587293 + 733 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2033D15.2 NA 0.235 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot AC018647.3 NA chr7 35715034 35734887 + 19854 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC018647.3 NA 0.012 70-80% Brain 1.398412369 Breast_cancer,PAAD NA NA boxplot RPS3AP42 ribosomal protein S3a pseudogene 42 chr11 92498152 92498935 - 784 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPS3AP42 NA 0.012 90-100% NA NA HCC NA NA boxplot RP4-614O4.13 NA chr20 35262727 35264187 - 1461 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-614O4.13 NA 0.788 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),PAAD(down) NA boxplot KB-1568E2.1 NA chr8 130595299 130655712 - 60414 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KB-1568E2.1 NA 0.024 0-10% Testis 4.906892038 Breast_cancer,PAAD NA NA boxplot AC013268.3 NA chr2 110007675 110010783 + 3109 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC013268.3 NA 0.035 40-50% NA NA PAAD NA NA boxplot NAPA-AS1 NAPA antisense RNA 1 chr19 47484282 47501597 + 17316 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NAPA-AS1 NA 0.788 20-30% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-618I10.4 NA chr4 69306469 69307173 - 705 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-618I10.4 NA 0.012 90-100% Bladder 4.906892038 HCC,Normal NA NA boxplot OR10AA1P olfactory receptor family 10 subfamily AA member 1 pseudogene chr1 158808399 158809335 - 937 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=OR10AA1P NA 0.012 20-30% NA NA Breast_cancer,PAAD NA NA boxplot RP11-798K3.2 NA chr15 66984108 67065268 - 81161 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-798K3.2 NA 0.271 50-60% Liver 2.393724888 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-459E5.1 NA chr8 22690150 22798616 + 108467 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-459E5.1 NA 0.082 50-60% Skin 2.849354559 Breast_cancer,HCC,Normal,PAAD NA NA boxplot LINC00347 long intergenic non-protein coding RNA 347 chr13 74552503 74565445 + 12943 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00347 NA 0.012 50-60% Testis 4.906892038 Breast_cancer,PAAD NA NA boxplot RP11-692C23.1 NA chr5 2787451 2788549 - 1099 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-692C23.1 NA 0.012 50-60% NA NA Breast_cancer,PAAD NA NA boxplot RP11-981G7.6 NA chr8 10486807 10489666 + 2860 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-981G7.6 NA 0.047 10-20% NA NA Breast_cancer,CRC,Normal,PAAD NA NA boxplot RAB42P1 RAB42, member RAS oncogene family, pseudogene 1 chr14 89892128 89892443 + 316 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RAB42P1 NA 0.012 90-100% Testis 4.906892038 HCC NA NA boxplot UBXN7-AS1 UBXN7 antisense RNA 1 chr3 196431385 196432530 + 1146 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=UBXN7-AS1 NA 0.082 90-100% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP5-1041C10.3 NA chr20 49829125 49831085 + 1961 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-1041C10.3 NA 0.176 40-50% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot SAMMSON NA chr3 69999577 70015318 + 15742 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SAMMSON NA 0.047 80-90% NA NA CRC,Normal NA NA boxplot RP3-348I23.3 NA chr6 20722328 20723655 - 1328 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-348I23.3 NA 0.012 90-100% NA NA Breast_cancer NA NA boxplot SLC25A24P1 SLC25A24 pseudogene 1 chr1 108272943 108337853 + 64911 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SLC25A24P1 exo_circ_027042 0.247 0-10% Testis 3.709609022 CHD,CRC,HCC,Normal,PAAD NA NA boxplot AC012146.7 NA chr17 5111468 5115004 + 3537 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC012146.7 NA 0.8 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),HCC(up) NA boxplot LLNLF-173C4.1 NA chr19 197961 200775 + 2815 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LLNLF-173C4.1 NA 0.082 90-100% NA NA CRC,PAAD NA NA boxplot RPL30P13 ribosomal protein L30 pseudogene 13 chr12 40068243 40068590 - 348 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL30P13 exo_circ_051041 0.012 40-50% NA NA Breast_cancer,Normal NA NA boxplot RP11-674E16.4 NA chr3 155742142 155743726 - 1585 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-674E16.4 NA 0.012 60-70% NA NA NA NA NA boxplot RP11-466F5.10 NA chr1 165706556 165707284 - 729 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-466F5.10 NA 0.024 0-10% NA NA HCC,Normal NA NA boxplot CICP22 capicua transcriptional repressor pseudogene 22 chr7 39796593 39797911 - 1319 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CICP22 NA 0.024 80-90% NA NA Breast_cancer,Normal NA NA boxplot ACTN4P1 actinin, alpha 4 pseudogene 1 chr4 116598161 116599611 + 1451 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ACTN4P1 NA 0.165 80-90% NA NA Breast_cancer,HCC,Normal NA NA boxplot PPIAP14 peptidylprolyl isomerase A (cyclophilin A) pseudogene 14 chr18 5002759 5003254 - 496 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PPIAP14 NA 0.012 10-20% NA NA Normal NA NA boxplot RPS3AP32 ribosomal protein S3a pseudogene 32 chr8 74055882 74056647 + 766 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPS3AP32 NA 0.035 40-50% NA NA CRC,Normal,PAAD NA NA boxplot RP11-8L8.2 NA chr14 101120856 101123542 + 2687 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-8L8.2 NA 0.518 20-30% Spleen 1.171566613 Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot PRO1804 uncharacterized LOC100133319 chr17 69232963 69235012 - 2050 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PRO1804 NA 0.035 80-90% NA NA CRC NA NA boxplot HRAT17 heart tissue-associated transcript 17 chr7 112954646 112995634 - 40989 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HRAT17 NA 0.012 30-40% NA NA Normal,PAAD NA NA boxplot PTCHD3P1 patched domain containing 3 pseudogene 1 chr10 29421476 29422012 - 537 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PTCHD3P1 NA 0.365 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot ZNF528-AS1 ZNF528 antisense RNA 1 chr19 52388842 52397766 - 8925 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ZNF528-AS1 NA 0.8 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down) NA boxplot RP11-347C12.4 NA chr16 30206510 30206927 + 418 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-347C12.4 NA 0.035 90-100% NA NA CRC,Normal NA NA boxplot AC007136.1 NA chr19 2030853 2031051 - 199 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC007136.1 NA 0.012 90-100% NA NA NA NA NA boxplot RP5-968D22.3 NA chr1 168400829 168495685 - 94857 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-968D22.3 NA 0.012 80-90% Liver 4.906892038 Breast_cancer,HCC NA NA boxplot CTD-3216D2.5 NA chr20 34281632 34286466 - 4835 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-3216D2.5 NA 0.035 70-80% NA NA Breast_cancer,HCC NA NA boxplot RP11-89K10.2 NA chr8 126582631 126583006 - 376 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-89K10.2 NA 0.012 80-90% NA NA HCC NA NA boxplot RP11-65L3.4 NA chr2 178541125 178541799 + 675 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-65L3.4 NA 0.259 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-13N12.1 NA chr8 16676905 16915044 - 238140 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-13N12.1 NA 0.012 30-40% Testis 3.855979953 Breast_cancer,HCC NA NA boxplot LINC01237 long intergenic non-protein coding RNA 1237 chr2 241881363 242078722 + 197360 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01237 NA 0.294 40-50% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot NTAN1P2 N-terminal asparagine amidase pseudogene 2 chr8 86481754 86483002 - 1249 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NTAN1P2 NA 0.106 40-50% NA NA CHD,CRC,Normal,PAAD NA NA boxplot AL022341.3 NA chr16 648473 649200 - 728 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AL022341.3 NA 0.129 70-80% NA NA CRC,HCC,Normal,PAAD NA NA boxplot MT1L metallothionein 1L (gene/pseudogene) chr16 56617476 56618818 + 1343 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MT1L NA 0.459 20-30% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP5-951N9.2 NA chr12 1385833 1386987 + 1155 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-951N9.2 NA 0.024 90-100% NA NA HCC NA NA boxplot SF3A3P1 splicing factor 3a, subunit 3 pseudogene 1 chr20 3489529 3491005 - 1477 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SF3A3P1 NA 0.576 50-60% Testis 3.18763364 CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-370I10.2 NA chr12 48231098 48284210 - 53113 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-370I10.2 NA 0.012 70-80% NA NA Normal NA NA boxplot SMAD5-AS1 SMAD5 antisense RNA 1 chr5 136129507 136134890 - 5384 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SMAD5-AS1 NA 0.188 70-80% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-753N8.1 NA chr12 90280894 90300340 + 19447 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-753N8.1 NA 0.012 90-100% Testis 4.740931793 NA NA NA boxplot RP11-159H22.2 NA chr11 27471729 27482433 + 10705 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-159H22.2 NA 0.012 90-100% NA NA Breast_cancer,CRC,Normal NA NA boxplot POU5F1P4 POU class 5 homeobox 1 pseudogene 4 chr1 155433178 155434262 + 1085 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=POU5F1P4 NA 0.024 70-80% NA NA Breast_cancer,CRC,HCC NA NA boxplot RP11-252A24.2 NA chr16 74332402 74368240 - 35839 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-252A24.2 NA 0.824 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down) NA boxplot SETP11 SET pseudogene 11 chr3 151269440 151270129 + 690 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SETP11 exo_circ_048942,exo_circ_043759 0.106 50-60% Testis 4.018237873 CRC,HCC,Normal,PAAD NA NA boxplot RP11-493L12.7 NA chr12 47265665 47266108 + 444 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-493L12.7 NA 0.094 80-90% NA NA HCC,Normal,PAAD NA NA boxplot RP11-792A8.4 NA chr7 66739829 66740385 - 557 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-792A8.4 NA 0.882 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down) NA boxplot GS1-600G8.5 NA chrX 13266048 13303452 - 37405 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GS1-600G8.5 NA 0.024 30-40% Lung 4.528614731 PAAD NA NA boxplot RP11-44F14.8 NA chr16 53386944 53389085 + 2142 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-44F14.8 NA 0.565 10-20% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(down),PAAD(down) NA boxplot CTD-2587H24.5 NA chr19 55158939 55177540 + 18602 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2587H24.5 NA 0.129 80-90% NA NA Breast_cancer,Normal,PAAD NA NA boxplot RP11-512N21.1 NA chr12 101936216 101936674 + 459 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-512N21.1 NA 0.024 40-50% NA NA Normal NA NA boxplot BX322557.10 NA chr21 45288052 45291738 + 3687 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=BX322557.10 NA 0.694 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),HCC(down) NA boxplot CTD-2353F22.1 NA chr5 36666214 36725195 - 58982 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2353F22.1 NA 0.824 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down) NA boxplot BTF3L4P3 basic transcription factor 3-like 4 pseudogene 3 chr6 137543897 137544372 - 476 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=BTF3L4P3 NA 0.012 90-100% NA NA HCC,Normal NA NA boxplot RP11-81A1.4 NA chr15 79875920 79878179 - 2260 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-81A1.4 NA 0.012 30-40% NA NA CRC NA NA boxplot AC025016.1 NA chr11 5938751 5944984 + 6234 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC025016.1 NA 0.012 60-70% Testis 4.906892038 HCC NA NA boxplot RP11-80A15.1 NA chr14 24501594 24508688 + 7095 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-80A15.1 NA 0.118 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP5-935K16.2 NA chr2 127840606 127841763 - 1158 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-935K16.2 NA 0.047 30-40% NA NA Breast_cancer,CRC,Normal,PAAD NA NA boxplot RP11-557J10.4 NA chr4 145642336 145650624 - 8289 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-557J10.4 NA 0.012 20-30% NA NA CRC,HCC NA NA boxplot RP11-158I9.5 NA chr11 118885841 118887742 - 1902 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-158I9.5 NA 0.035 50-60% NA NA Breast_cancer,Normal,PAAD NA NA boxplot RP3-408N23.4 NA chr22 40788777 40789267 - 491 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-408N23.4 NA 0.024 50-60% NA NA CRC NA NA boxplot RP11-329B9.4 NA chr3 184734075 184738949 + 4875 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-329B9.4 NA 0.059 70-80% NA NA Breast_cancer,Normal,PAAD NA NA boxplot CTB-31O20.6 NA chr19 1852382 1853622 + 1241 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTB-31O20.6 NA 0.153 40-50% NA NA HCC,Normal,PAAD NA NA boxplot AC011290.4 NA chr7 39545646 39566239 - 20594 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC011290.4 NA 0.012 80-90% Testis 4.842125877 NA NA NA boxplot AC019186.1 NA chr2 157725708 157736005 - 10298 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC019186.1 NA 0.094 60-70% NA NA HCC,Normal,PAAD NA NA boxplot LINC00662 long intergenic non-protein coding RNA 662 chr19 27684580 27793940 - 109361 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00662 NA 0.871 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down),PAAD(up) NA boxplot SFR1P2 SFR1 pseudogene 2 chrX 85849410 85850139 - 730 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SFR1P2 NA 0.012 0-10% NA NA PAAD NA NA boxplot RP11-119H12.4 NA chr4 112826307 112827607 + 1301 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-119H12.4 NA 0.118 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP13-93L13.1 NA chr9 89472237 89472692 + 456 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP13-93L13.1 NA 0.012 80-90% NA NA Breast_cancer,Normal NA NA boxplot RP11-87F15.2 NA chr4 176308268 176320458 - 12191 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-87F15.2 NA 0.447 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-480G7.2 NA chr16 46789898 46792040 + 2143 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-480G7.2 NA 0.047 70-80% Testis 3.333435312 Breast_cancer,CRC,HCC,Normal NA NA boxplot MRPS31P2 mitochondrial ribosomal protein S31 pseudogene 2 chr13 19552571 19570288 - 17718 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MRPS31P2 NA 0.259 20-30% Testis 4.239862307 CRC,HCC,Normal,PAAD NA NA boxplot RP11-231C14.6 NA chr16 29312350 29331277 + 18928 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-231C14.6 NA 0.553 40-50% Ovary 3.49655068 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot E2F6P2 E2F transcription factor 6 pseudogene 2 chr22 21141624 21142371 - 748 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=E2F6P2 NA 0.235 70-80% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP3-512E2.2 NA chr6 89950116 89953186 + 3071 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-512E2.2 NA 0.294 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AP000356.2 NA chr22 24598054 24599398 + 1345 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AP000356.2 NA 0.012 80-90% NA NA Breast_cancer NA NA boxplot RPL29P23 ribosomal protein L29 pseudogene 23 chr11 33190062 33190503 - 442 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL29P23 NA 0.024 70-80% NA NA Normal NA NA boxplot AMD1P1 adenosylmethionine decarboxylase 1 pseudogene 1 chr10 20350049 20351100 + 1052 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AMD1P1 exo_circ_028195,exo_circ_047636,exo_circ_056092,exo_circ_025012,exo_circ_022447 0.082 50-60% NA NA CRC,Normal,PAAD NA NA boxplot NPM1P39 nucleophosmin 1 (nucleolar phosphoprotein B23, numatrin) pseudogene 39 chr1 27206930 27207796 + 867 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NPM1P39 NA 1 0-10% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-144F15.1 NA chr12 106495958 106774918 - 278961 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-144F15.1 NA 0.012 90-100% NA NA Breast_cancer,CRC NA NA boxplot CDC27P1 cell division cycle 27 pseudogene 1 chr2 132262328 132263042 + 715 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CDC27P1 NA 0.6 50-60% Testis 4.906892038 Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot SNHG16 small nucleolar RNA host gene 16 chr17 76557766 76565348 + 7583 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SNHG16 exo_circ_023792 1 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot AP001046.5 NA chr21 43358147 43362349 - 4203 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AP001046.5 NA 0.506 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CHL1-AS2 CHL1 antisense RNA 2 chr3 195758 197341 - 1584 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CHL1-AS2 NA 0.047 20-30% Nerve 1.583652434 Breast_cancer,HCC,Normal,PAAD NA NA boxplot AC064850.4 NA chr2 135510546 135511943 - 1398 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC064850.4 exo_circ_048481 0.071 50-60% NA NA Breast_cancer,CRC,Normal NA NA boxplot TEX21P testis expressed 21, pseudogene chr14 64346171 64374666 - 28496 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TEX21P NA 0.435 10-20% Testis 1.011958378 CRC,HCC,Normal,PAAD CHD(down),HCC(down),PAAD(down) NA boxplot AC005355.3 NA chr5 134522613 134523096 - 484 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC005355.3 NA 0.012 90-100% NA NA CRC,Normal NA NA boxplot AP000223.42 NA chr21 25582770 25583326 - 557 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AP000223.42 NA 0.024 40-50% NA NA HCC,Normal NA NA boxplot RP11-506K19.2 NA chr14 38973399 38974085 - 687 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-506K19.2 NA 0.012 70-80% Testis 4.906892038 Breast_cancer NA NA boxplot RP11-474D1.3 NA chr12 130033454 130045057 - 11604 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-474D1.3 NA 0.012 70-80% NA NA Breast_cancer,HCC NA NA boxplot CTB-33G10.11 NA chr19 49625994 49626439 - 446 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTB-33G10.11 NA 0.059 70-80% NA NA Normal,PAAD NA NA boxplot TCEA1P2 transcription elongation factor A (SII), 1 pseudogene 2 chr3 37275693 37276598 + 906 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TCEA1P2 NA 1 0-10% NA NA CHD,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-361H10.5 NA chr14 76279173 76283103 + 3931 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-361H10.5 NA 0.012 60-70% NA NA Breast_cancer NA NA boxplot RP11-211A18.1 NA chr1 227264776 227265207 - 432 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-211A18.1 NA 0.024 10-20% Testis 4.906892038 PAAD NA NA boxplot RP11-11C20.3 NA chr8 51810110 51810681 - 572 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-11C20.3 NA 0.294 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot WASH3P WAS protein family homolog 3 pseudogene chr15 101961603 101976543 + 14941 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=WASH3P NA 1 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up),CRC(up),HCC(up),PAAD(up) NA boxplot DDX11L1 DEAD/H-box helicase 11 like 1 chr1 11869 14409 + 2541 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DDX11L1 NA 0.929 0-10% Testis 4.384792898 Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up),CRC(up),HCC(up),PAAD(up) NA boxplot AC074183.3 NA chr7 84939335 84940256 - 922 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC074183.3 NA 0.047 90-100% NA NA Breast_cancer,HCC,Normal NA NA boxplot LINC00475 long intergenic non-protein coding RNA 475 chr9 92141298 92160114 + 18817 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00475 NA 0.024 30-40% NA NA Breast_cancer,Normal NA NA boxplot HNRNPA3P12 heterogeneous nuclear ribonucleoprotein A3 pseudogene 12 chr1 53974969 53976031 - 1063 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HNRNPA3P12 NA 0.447 70-80% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot AC005606.15 NA chr16 1997654 1998374 + 721 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC005606.15 NA 0.153 50-60% NA NA Breast_cancer,Normal,PAAD NA NA boxplot AC005255.3 NA chr19 14792318 14792533 + 216 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC005255.3 NA 0.718 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot LINC01146 long intergenic non-protein coding RNA 1146 chr14 88024550 88097619 + 73070 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01146 NA 0.671 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(up),PAAD(up) NA boxplot OR9R1P olfactory receptor family 9 subfamily R member 1 pseudogene chr12 55158847 55159723 + 877 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=OR9R1P NA 0.012 90-100% NA NA Normal NA NA boxplot CTD-2270N23.1 NA chr15 47730144 47730935 - 792 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2270N23.1 NA 0.918 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-347H15.5 NA chr11 50279828 50298452 - 18625 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-347H15.5 NA 0.035 90-100% Testis 4.885550175 Normal,PAAD NA NA boxplot XX-C2158C12.2 NA chr6 170725197 170728488 + 3292 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=XX-C2158C12.2 NA 0.082 70-80% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-713P17.4 NA chr11 134035832 134037107 - 1276 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-713P17.4 NA 0.024 20-30% NA NA Normal,PAAD NA NA boxplot RP11-361L15.3 NA chr16 66944660 66945096 - 437 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-361L15.3 NA 0.2 0-10% NA NA Breast_cancer,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot AC009970.1 NA chr2 60495686 60499964 + 4279 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC009970.1 NA 0.012 60-70% NA NA Breast_cancer,Normal NA NA boxplot RP11-258F1.2 NA chr17 18107334 18110463 - 3130 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-258F1.2 NA 0.176 10-20% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot RP11-1094M14.10 NA chr17 35540039 35540797 - 759 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1094M14.10 NA 0.035 80-90% NA NA CRC,Normal NA NA boxplot RP11-463O9.9 NA chr16 86520383 86523897 - 3515 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-463O9.9 NA 0.153 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP5-845O24.8 NA chr1 12822686 12823159 - 474 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-845O24.8 NA 0.012 50-60% Testis 4.906892038 PAAD NA NA boxplot RP11-196G11.4 NA chr16 31118078 31118747 + 670 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-196G11.4 NA 0.224 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot DAZAP2P1 DAZ associated protein 2 pseudogene 1 chr2 202201384 202201886 - 503 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DAZAP2P1 NA 0.071 80-90% NA NA Breast_cancer,CHD,HCC,Normal NA NA boxplot RP11-274A11.5 NA chr16 81617038 81617543 - 506 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-274A11.5 NA 0.012 80-90% NA NA Breast_cancer,HCC NA NA boxplot RP13-467H17.1 NA chr8 142403652 142407028 + 3377 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP13-467H17.1 NA 0.024 90-100% Testis 1.350947038 Breast_cancer,CRC,Normal NA NA boxplot RP11-203F10.6 NA chr1 204346776 204347258 - 483 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-203F10.6 NA 0.741 70-80% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CTD-2396E7.10 NA chr19 6494320 6495025 + 706 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2396E7.10 NA 0.224 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP5-1195D24.1 NA chr20 16857962 16864148 - 6187 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-1195D24.1 NA 0.059 30-40% Spleen 4.906892038 Breast_cancer,CRC,HCC,Normal NA NA boxplot RPSAP76 ribosomal protein SA pseudogene 76 chr9 125194649 125195821 - 1173 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPSAP76 NA 0.024 80-90% NA NA HCC,Normal NA NA boxplot RP11-136K14.1 NA chr6 150600834 150605850 + 5017 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-136K14.1 NA 0.082 50-60% NA NA CRC,HCC,Normal NA NA boxplot RP11-443B7.3 NA chr1 234979647 234980804 - 1158 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-443B7.3 NA 0.188 30-40% Whole Blood 1.300673739 CRC,HCC,Normal,PAAD NA NA boxplot CES1P2 carboxylesterase 1 pseudogene 2 chr16 55728115 55750111 + 21997 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CES1P2 NA 0.024 50-60% Liver 1.491427473 Breast_cancer,HCC NA NA boxplot RP5-1024N4.5 NA chr1 48262230 48263179 - 950 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-1024N4.5 NA 0.012 60-70% NA NA CRC,Normal NA NA boxplot EIF5AP3 eukaryotic translation initiation factor 5A pseudogene 3 chr19 45128569 45129030 + 462 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=EIF5AP3 NA 0.035 60-70% NA NA PAAD NA NA boxplot RP4-801G22.3 NA chr1 157636300 157640301 - 4002 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-801G22.3 NA 0.012 80-90% Testis 4.906892038 Breast_cancer,CRC,Normal NA NA boxplot RP11-430G17.3 NA chr1 61741998 61742424 - 427 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-430G17.3 NA 0.035 60-70% NA NA CRC,HCC,Normal NA NA boxplot ATP6V0E1P3 ATPase, H+ transporting, lysosomal 9kDa, V0 subunit e1 pseudogene 3 chr2 33602041 33602286 + 246 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ATP6V0E1P3 NA 0.012 90-100% Testis 4.906892038 Breast_cancer,Normal NA NA boxplot XIAP-AS1 XIAP antisense RNA 1 chrX 123872626 123873932 - 1307 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=XIAP-AS1 NA 0.024 70-80% Spleen 4.906892038 Normal NA NA boxplot IFNWP2 interferon, omega 1 pseudogene 2 chr9 21420234 21420813 + 580 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=IFNWP2 NA 0.012 20-30% Testis 3.356594765 Normal NA NA boxplot ZFYVE9P1 zinc finger, FYVE domain containing 9 pseudogene 1 chrX 137660519 137662242 + 1724 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ZFYVE9P1 NA 0.035 50-60% Brain 4.906892038 Breast_cancer,HCC,Normal NA NA boxplot RP11-111K18.2 NA chr7 42901272 42902639 - 1368 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-111K18.2 NA 0.024 70-80% NA NA CRC NA NA boxplot SAPCD1-AS1 SAPCD1 antisense RNA 1 chr6 31764310 31765588 - 1279 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SAPCD1-AS1 NA 0.118 40-50% Pituitary 1.006664417 CRC,HCC,Normal,PAAD NA NA boxplot AC106801.1 NA chr5 157565964 157569098 + 3135 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC106801.1 NA 0.059 70-80% NA NA CRC,HCC,Normal NA NA boxplot AC012360.6 NA chr2 105363038 105378839 + 15802 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC012360.6 NA 0.118 30-40% Ovary 1.488000067 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot EP300-AS1 EP300 antisense RNA 1 chr22 41174591 41197456 - 22866 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=EP300-AS1 NA 0.035 10-20% NA NA HCC,Normal,PAAD NA NA boxplot RP11-117L5.4 NA chr12 130419535 130421019 - 1485 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-117L5.4 NA 0.012 90-100% NA NA CRC NA NA boxplot RP11-6E9.4 NA chr4 169981747 169993806 + 12060 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-6E9.4 NA 0.341 20-30% Brain 3.213979082 CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot DDX10P1 DEAD-box helicase 10 pseudogene 1 chr10 30919012 30921235 - 2224 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DDX10P1 NA 0.365 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot KCND3-AS1 KCND3 antisense RNA 1 chr1 111909336 111910931 + 1596 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KCND3-AS1 NA 0.012 50-60% Testis 4.849504494 Breast_cancer,HCC,Normal NA NA boxplot URB1-AS1 URB1 antisense RNA 1 (head to head) chr21 32393130 32393960 + 831 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=URB1-AS1 NA 0.576 30-40% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RPL7AP31 ribosomal protein L7a pseudogene 31 chr4 56356135 56356932 + 798 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL7AP31 exo_circ_031716,exo_circ_054628,exo_circ_008353 0.035 80-90% NA NA Normal NA NA boxplot GSTA12P glutathione S-transferase alpha 12, pseudogene chr6 52765280 52778347 - 13068 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GSTA12P NA 0.153 80-90% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-209M4.1 NA chr17 43718314 43720436 - 2123 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-209M4.1 NA 0.129 40-50% Testis 4.523802228 CRC,Normal,PAAD NA NA boxplot AC009501.4 NA chr2 63043922 63048640 - 4719 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC009501.4 NA 0.129 90-100% NA NA CRC,HCC,Normal NA NA boxplot SCAND3P1 SCAN domain containing 3 pseudogene 1 chr13 35185294 35186679 + 1386 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SCAND3P1 NA 0.035 10-20% NA NA CRC,Normal NA NA boxplot RP1-27K12.2 NA chr6 53561289 53617171 - 55883 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-27K12.2 NA 0.059 10-20% Liver 3.810021955 Breast_cancer,HCC,PAAD NA NA boxplot ANXA2P2 annexin A2 pseudogene 2 chr9 33624274 33625293 + 1020 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ANXA2P2 NA 1 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-50I19.1 NA chr12 32007127 32007435 + 309 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-50I19.1 NA 0.153 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot MIR130B microRNA 130b chr22 21652270 21670237 + 17968 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MIR130B NA 0.153 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP5-1021I20.1 NA chr14 73787360 73803270 + 15911 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-1021I20.1 NA 0.376 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot GNL3LP1 guanine nucleotide binding protein-like 3 (nucleolar)-like pseudogene 1 chr5 60891935 60893577 - 1643 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GNL3LP1 NA 0.235 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-257I8.2 NA chr5 125036831 125042239 + 5409 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-257I8.2 NA 0.012 60-70% Testis 4.138460468 Normal NA NA boxplot RP11-326G21.1 NA chr1 149264252 149264816 + 565 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-326G21.1 NA 0.459 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RGPD4-AS1 RGPD4 antisense RNA 1 (head to head) chr2 107823063 107826891 - 3829 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RGPD4-AS1 NA 0.012 90-100% NA NA Breast_cancer,Normal NA NA boxplot AC068499.10 NA chr19 18204730 18220480 + 15751 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC068499.10 NA 0.129 80-90% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot PRKAG2-AS1 PRKAG2 antisense RNA 1 chr7 151877042 151879223 + 2182 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PRKAG2-AS1 NA 0.694 20-30% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot CTD-3105H18.4 NA chr19 12379746 12383687 - 3942 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-3105H18.4 NA 0.447 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-455F5.6 NA chr16 30110895 30111955 + 1061 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-455F5.6 NA 0.012 50-60% NA NA PAAD NA NA boxplot MRPL37P1 mitochondrial ribosomal protein L37 pseudogene 1 chr18 58690356 58692153 + 1798 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MRPL37P1 NA 0.106 50-60% Prostate 1.496160608 Breast_cancer,CRC,Normal,PAAD NA NA boxplot JTBP1 jumping translocation breakpoint pseudogene 1 chr22 40798039 40798285 + 247 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=JTBP1 NA 0.012 10-20% Ovary 3.325275293 Normal NA NA boxplot CTD-2027I19.2 NA chr19 24162370 24163425 - 1056 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2027I19.2 NA 0.024 60-70% NA NA Normal NA NA boxplot RPL23AP30 ribosomal protein L23a pseudogene 30 chr2 201066691 201067191 + 501 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL23AP30 NA 0.012 90-100% NA NA Normal NA NA boxplot C15orf56 chromosome 15 open reading frame 56 chr15 40250664 40252969 - 2306 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=C15orf56 NA 0.047 30-40% NA NA Breast_cancer,CRC,HCC NA NA boxplot RP11-109A6.3 NA chr10 129768844 129769435 + 592 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-109A6.3 exo_circ_042537 0.071 40-50% NA NA Breast_cancer,CRC,Normal,PAAD NA NA boxplot RP11-363J20.1 NA chr14 69183020 69214092 - 31073 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-363J20.1 NA 0.035 80-90% Testis 3.088565079 Normal NA NA boxplot RP3-488M23.3 NA chr12 3752518 3757842 + 5325 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-488M23.3 NA 0.082 40-50% NA NA HCC,Normal,PAAD NA NA boxplot FAM138A family with sequence similarity 138 member A chr1 34554 36081 - 1528 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FAM138A NA 0.035 40-50% NA NA CHD,PAAD NA NA boxplot RP4-799D16.1 NA chr1 25043707 25113120 - 69414 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-799D16.1 NA 0.165 60-70% Testis 4.32394268 CRC,HCC,Normal,PAAD NA NA boxplot ENPP7P1 ectonucleotide pyrophosphatase/phosphodiesterase 7 pseudogene 1 chr8 8154308 8216916 + 62609 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ENPP7P1 NA 0.788 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CRC(down),HCC(up),PAAD(down) NA boxplot AC006011.4 NA chr2 127846736 127847084 - 349 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC006011.4 NA 0.871 20-30% NA NA CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-43F13.1 NA chr5 1598920 1634005 - 35086 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-43F13.1 NA 0.906 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),PAAD(up) NA boxplot RP11-317P15.4 NA chr1 182615254 182616629 + 1376 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-317P15.4 NA 0.471 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot KB-1471A8.1 NA chr8 119867419 119874488 - 7070 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KB-1471A8.1 NA 0.035 20-30% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot HIPK1-AS1 HIPK1 antisense RNA 1 chr1 113924000 113929492 - 5493 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HIPK1-AS1 NA 0.318 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot NPIPB1P nuclear pore complex interacting protein family member B1, pseudogene chr18 11619509 11639699 - 20191 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NPIPB1P NA 0.012 90-100% Testis 4.560630287 NA NA NA boxplot SUCLA2P1 succinate-CoA ligase, ADP-forming, beta subunit pseudogene 1 chr6 30468882 30470251 + 1370 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SUCLA2P1 NA 0.012 50-60% Testis 3.007040686 HCC,Normal NA NA boxplot RP11-384F7.2 NA chr3 117672154 117997592 - 325439 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-384F7.2 NA 0.024 40-50% NA NA Breast_cancer,CRC NA NA boxplot RP11-489D6.2 NA chr15 33303657 33310659 - 7003 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-489D6.2 NA 0.165 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot NUS1P1 NUS1 dehydrodolichyl diphosphate synthase subunit pseudogene 1 chrX 47512602 47513483 - 882 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NUS1P1 NA 0.976 0-10% NA NA CHD,CRC,HCC,Normal,PAAD CRC(down),PAAD(down) NA boxplot RP11-22B23.1 NA chr12 9277235 9313241 + 36007 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-22B23.1 NA 0.788 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),PAAD(up) NA boxplot RP11-545I5.3 NA chr6 145799409 145886585 + 87177 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-545I5.3 NA 0.635 10-20% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot RPL23AP82 ribosomal protein L23a pseudogene 82 chr22 50756948 50801309 + 44362 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL23AP82 NA 0.988 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-350J20.12 NA chr6 149852462 149853192 + 731 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-350J20.12 NA 0.094 70-80% Vagina 2.744977547 CRC,HCC,Normal,PAAD NA NA boxplot INTS6-AS1 INTS6 antisense RNA 1 chr13 51452367 51552364 + 99998 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=INTS6-AS1 NA 0.706 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD HCC(down),PAAD(down) NA boxplot RP11-894J14.2 NA chr3 52848085 52848553 - 469 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-894J14.2 NA 0.035 60-70% NA NA Breast_cancer,CRC,PAAD NA NA boxplot TPT1P12 tumor protein, translationally-controlled 1 pseudogene 12 chr12 9155881 9156372 - 492 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TPT1P12 NA 0.024 80-90% NA NA CRC NA NA boxplot HMGN1P3 high mobility group nucleosome binding domain 1 pseudogene 3 chr14 68887785 68888084 - 300 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HMGN1P3 NA 0.365 70-80% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-421L21.3 NA chr1 101025878 101087268 + 61391 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-421L21.3 NA 0.706 10-20% NA NA CRC,HCC,Normal,PAAD PAAD(up) NA boxplot MAGI1-IT1 MAGI1 intronic transcript 1 chr3 65872815 65954558 - 81744 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MAGI1-IT1 NA 0.024 10-20% NA NA Normal,PAAD NA NA boxplot RP11-403P17.2 NA chr16 66579983 66580716 - 734 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-403P17.2 NA 0.141 60-70% Testis 3.161173391 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-561C5.7 NA chr15 85272527 85272974 + 448 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-561C5.7 NA 0.024 80-90% NA NA PAAD NA NA boxplot HIGD1AP16 HIG1 hypoxia inducible domain family member 1A pseudogene 16 chr20 35878476 35878733 + 258 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HIGD1AP16 NA 0.094 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-151A10.3 NA chr10 125162379 125162971 + 593 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-151A10.3 NA 0.012 80-90% NA NA Breast_cancer,CRC NA NA boxplot RPS4XP11 ribosomal protein S4X pseudogene 11 chr10 32102522 32103293 - 772 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPS4XP11 NA 0.506 80-90% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-131L12.3 NA chr12 118428281 118428870 + 590 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-131L12.3 NA 0.106 30-40% NA NA CRC,HCC,Normal NA NA boxplot TUSC8 tumor suppressor candidate 8 (non-protein coding) chr13 44400250 44405984 - 5735 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TUSC8 NA 0.012 60-70% NA NA Breast_cancer,HCC NA NA boxplot HSPE1P4 heat shock protein family E (Hsp10) member 1 pseudogene 4 chr12 101873316 101873623 - 308 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HSPE1P4 NA 0.012 90-100% NA NA CHD,HCC,Normal NA NA boxplot CTC-480C2.1 NA chr5 85663232 85664684 + 1453 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-480C2.1 NA 0.035 20-30% NA NA HCC,PAAD NA NA boxplot RP3-425C14.6 NA chr6 122454358 122454612 + 255 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-425C14.6 NA 0.035 30-40% NA NA CRC,Normal NA NA boxplot RP11-13A1.1 NA chr12 89010681 89019679 - 8999 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-13A1.1 NA 0.071 60-70% NA NA CRC,Normal NA NA boxplot STK4-AS1 STK4 antisense RNA 1 (head to head) chr20 44963794 44966402 - 2609 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=STK4-AS1 NA 0.176 40-50% Testis 2.388155694 CRC,HCC,Normal,PAAD NA NA boxplot RP11-252I13.1 NA chr5 107724961 107727117 + 2157 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-252I13.1 NA 0.012 10-20% NA NA HCC NA NA boxplot AC008592.3 NA chr5 95834424 95835046 - 623 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC008592.3 NA 0.353 10-20% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CTD-2589M5.4 NA chr11 46256355 46274547 - 18193 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2589M5.4 NA 0.282 30-40% Pituitary 3.798458453 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot LINC01087 long intergenic non-protein coding RNA 1087 chr2 131637025 131649615 + 12591 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01087 NA 0.012 80-90% Testis 4.409028265 Breast_cancer,PAAD NA NA boxplot RNF6P1 ring finger protein (C3H2C3 type) 6 pseudogene 1 chr21 39373763 39377066 - 3304 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RNF6P1 NA 0.012 10-20% Testis 4.906892038 Breast_cancer,Normal NA NA boxplot LINC01460 long intergenic non-protein coding RNA 1460 chr2 27705786 27715732 - 9947 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01460 NA 0.024 60-70% NA NA Breast_cancer,PAAD NA NA boxplot LINC00115 long intergenic non-protein coding RNA 115 chr1 826206 827522 - 1317 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00115 NA 0.329 60-70% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RPPH1 ribonuclease P RNA component H1 chr14 20343075 20343407 - 333 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPPH1 NA 1 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up),CRC(up) NA boxplot CH17-472G23.2 NA chr1 120267334 120341871 - 74538 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CH17-472G23.2 NA 0.906 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-139H15.5 NA chr15 55288849 55289346 - 498 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-139H15.5 NA 0.047 70-80% NA NA CRC,HCC,Normal NA NA boxplot RP11-477J21.2 NA chr9 121238117 121240089 - 1973 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-477J21.2 NA 0.024 40-50% Testis 4.420935288 Normal NA NA boxplot EIF4BP5 eukaryotic translation initiation factor 4B pseudogene 5 chr16 47565090 47566884 - 1795 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=EIF4BP5 NA 0.082 90-100% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-494O16.3 NA chr22 49845929 49846090 + 162 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-494O16.3 NA 0.012 80-90% Testis 3.251888815 Normal NA NA boxplot CTC-550B14.6 NA chr19 55027593 55053928 - 26336 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-550B14.6 NA 0.847 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-101E5.6 NA chr9 61194211 61203446 - 9236 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-101E5.6 NA 0.012 60-70% NA NA CRC NA NA boxplot FAM157A family with sequence similarity 157 member A chr3 198153287 198222513 + 69227 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FAM157A NA 0.929 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CRC(up),HCC(up),PAAD(up) NA boxplot CTD-3247F14.2 NA chr8 22679013 22684009 - 4997 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-3247F14.2 NA 0.118 40-50% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot RP11-12L8.1 NA chr1 115919350 115931561 + 12212 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-12L8.1 NA 0.118 60-70% Testis 3.758180367 CRC,HCC,Normal,PAAD NA NA boxplot OR7E155P olfactory receptor family 7 subfamily E member 155 pseudogene chr13 41439834 41440847 - 1014 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=OR7E155P NA 0.012 90-100% Testis 3.676327594 HCC NA NA boxplot SCGB1B2P secretoglobin family 1B member 2, pseudogene chr19 34576733 34577701 - 969 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SCGB1B2P NA 0.153 70-80% Skin 2.172039604 CRC,HCC,Normal,PAAD NA NA boxplot LINC00881 long intergenic non-protein coding RNA 881 chr3 157089881 157101135 + 11255 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00881 NA 0.024 70-80% Heart 3.608952671 HCC,Normal NA NA boxplot RP5-882C2.2 NA chr17 44221401 44223710 + 2310 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-882C2.2 NA 0.388 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RPSAP21 ribosomal protein SA pseudogene 21 chr1 236819634 236820518 + 885 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPSAP21 NA 0.047 30-40% NA NA CRC,PAAD NA NA boxplot RP4-604G5.3 NA chr7 99992397 99993050 + 654 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-604G5.3 NA 0.012 60-70% NA NA Breast_cancer,HCC NA NA boxplot RP11-454K7.3 NA chr14 45369215 45370839 + 1625 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-454K7.3 NA 0.035 90-100% NA NA Normal,PAAD NA NA boxplot RP11-342M21.2 NA chr15 67142734 67146939 - 4206 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-342M21.2 exo_circ_057251 0.012 0-10% Testis 4.906892038 Breast_cancer,PAAD NA NA boxplot RP11-244H3.1 NA chr1 34974356 34985313 - 10958 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-244H3.1 NA 0.471 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot ASNSP1 asparagine synthetase pseudogene 1 chr8 46579213 46614523 - 35311 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ASNSP1 NA 0.047 10-20% Testis 4.844975915 PAAD NA NA boxplot RP11-66N24.7 NA chr14 23530682 23532367 + 1686 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-66N24.7 NA 0.012 90-100% NA NA NA NA NA boxplot RP11-398G24.2 NA chr8 121954640 122127184 - 172545 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-398G24.2 NA 0.118 60-70% Brain 4.906892038 Breast_cancer,CRC,Normal,PAAD NA NA boxplot AC009505.2 NA chr2 105846534 105857177 - 10644 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC009505.2 NA 0.682 10-20% Testis 3.425423339 Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot AF011889.2 NA chrX 149511509 149526264 - 14756 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AF011889.2 NA 0.212 70-80% NA NA Breast_cancer,CRC,Normal,PAAD NA NA boxplot HPVC1 human papillomavirus (type 18) E5 central sequence-like 1 chr7 54201224 54202421 + 1198 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HPVC1 NA 0.012 80-90% NA NA CRC NA NA boxplot WEE2-AS1 WEE2 antisense RNA 1 chr7 141704338 141738346 - 34009 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=WEE2-AS1 NA 0.694 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down),PAAD(up) NA boxplot CTD-2521M24.8 NA chr19 17419305 17419774 - 470 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2521M24.8 NA 0.035 80-90% NA NA HCC,PAAD NA NA boxplot OR8R1P olfactory receptor family 8 subfamily R member 1 pseudogene chr11 73248779 73249867 + 1089 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=OR8R1P NA 0.024 40-50% NA NA CRC,Normal NA NA boxplot MTND4P9 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 pseudogene 9 chr4 25718082 25719745 - 1664 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MTND4P9 NA 0.024 90-100% NA NA Normal NA NA boxplot RPL7P19 ribosomal protein L7 pseudogene 19 chr5 138473744 138474361 + 618 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL7P19 NA 0.118 90-100% NA NA CHD,CRC,Normal,PAAD NA NA boxplot RP11-676J12.9 NA chr17 795306 795794 + 489 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-676J12.9 NA 0.106 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot A2M-AS1 A2M antisense RNA 1 (head to head) chr12 9065177 9068060 + 2884 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=A2M-AS1 NA 0.353 10-20% NA NA CHD,CRC,HCC,Normal,PAAD CRC(up) NA boxplot AC073109.2 NA chr7 11820317 11821294 - 978 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC073109.2 NA 0.106 50-60% NA NA CRC,HCC,PAAD NA NA boxplot BX842568.2 NA chrX 36962196 36963425 - 1230 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=BX842568.2 NA 0.306 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-424I19.1 NA chr15 101116603 101117546 + 944 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-424I19.1 NA 0.012 90-100% Testis 4.906892038 HCC NA NA boxplot OSTCP1 oligosaccharyltransferase complex subunit pseudogene 1 chr6 158841117 158857632 - 16516 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=OSTCP1 NA 0.024 80-90% Testis 4.906892038 Breast_cancer,Normal,PAAD NA NA boxplot AC073218.1 NA chr2 34383788 34635340 + 251553 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC073218.1 NA 0.012 80-90% Testis 4.906892038 HCC NA NA boxplot VDAC1P2 voltage-dependent anion channel 1 pseudogene 2 chrX 49632500 49633349 - 850 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=VDAC1P2 NA 0.988 0-10% Muscle 1.302175221 CHD,CRC,HCC,Normal,PAAD CRC(down) NA boxplot AC025171.1 NA chr5 43041575 43045390 + 3816 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC025171.1 NA 0.788 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(up) NA boxplot RP3-402G11.28 NA chr22 50208461 50209542 - 1082 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-402G11.28 NA 0.176 70-80% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC016739.2 NA chr2 176200908 176201252 - 345 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC016739.2 NA 0.929 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot AC009506.1 NA chr2 159615296 159617082 + 1787 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC009506.1 NA 0.894 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),PAAD(down) NA boxplot MTCO1P9 MT-CO1 pseudogene 9 chr4 155459704 155461237 - 1534 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MTCO1P9 NA 0.012 0-10% NA NA HCC NA NA boxplot RP11-59C5.3 NA chr10 124996064 125001491 + 5428 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-59C5.3 NA 0.271 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC027119.1 NA chr3 5962842 6124120 + 161279 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC027119.1 NA 0.106 70-80% NA NA HCC,Normal,PAAD NA NA boxplot HYI-AS1 HYI antisense RNA 1 chr1 43453927 43456995 + 3069 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HYI-AS1 NA 0.129 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot XXbac-BPG248L24.10 NA chr6 31307815 31308549 - 735 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=XXbac-BPG248L24.10 NA 0.024 30-40% Testis 2.277007025 Breast_cancer,CRC,HCC NA NA boxplot RP1-120G22.11 NA chr1 6204840 6205780 - 941 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-120G22.11 NA 0.024 50-60% NA NA HCC,PAAD NA NA boxplot TOB2P1 transducer of ERBB2, 2 pseudogene 1 chr6 28217643 28218634 - 992 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TOB2P1 NA 0.2 70-80% Testis 1.014367538 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-296E7.1 NA chr6 80064286 80070199 - 5914 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-296E7.1 NA 0.929 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot DYNLL1P1 dynein, light chain, LC8-type 1 pseudogene 1 chr14 81246295 81246563 - 269 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DYNLL1P1 NA 0.082 90-100% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-286N22.14 NA chr11 61352244 61354477 + 2234 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-286N22.14 NA 0.4 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC060834.3 NA chr7 9737322 9769513 + 32192 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC060834.3 NA 0.024 70-80% Testis 4.906892038 Breast_cancer,HCC,Normal NA NA boxplot TH2LCRR T helper type 2 locus control region associated RNA chr5 132630589 132664272 - 33684 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TH2LCRR NA 0.094 20-30% NA NA CRC,HCC,Normal NA NA boxplot RP11-44F21.2 NA chr4 74993877 75034824 - 40948 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-44F21.2 NA 0.035 60-70% Heart 4.906892038 CRC,Normal,PAAD NA NA boxplot CTC-498J12.1 NA chr5 69038518 69043821 - 5304 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-498J12.1 NA 0.024 60-70% NA NA CRC NA NA boxplot UBOX5-AS1 UBOX5 antisense RNA 1 chr20 3106913 3150867 + 43955 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=UBOX5-AS1 NA 0.071 70-80% Testis 1.275593028 Breast_cancer,CRC,HCC,PAAD NA NA boxplot RP11-218M22.1 NA chr12 630891 663706 + 32816 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-218M22.1 NA 0.929 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot CTD-2547L16.1 NA chr8 18084868 18096394 + 11527 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2547L16.1 NA 0.471 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot FTH1P25 ferritin, heavy polypeptide 1 pseudogene 25 chr1 185071567 185072035 - 469 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FTH1P25 NA 0.012 90-100% Testis 4.906892038 Breast_cancer,HCC NA NA boxplot RP11-545M17.1 NA chr14 39103140 39103812 + 673 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-545M17.1 NA 0.118 80-90% Testis 4.906892038 HCC,Normal,PAAD NA NA boxplot AC000067.1 NA chr22 19667023 19667555 + 533 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC000067.1 NA 0.012 50-60% Brain 4.906892038 Breast_cancer,PAAD NA NA boxplot GMDS-AS1 GMDS antisense RNA 1 (head to head) chr6 2245748 2482022 + 236275 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GMDS-AS1 NA 0.976 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down) NA boxplot AC064853.3 NA chr2 227632969 227648606 - 15638 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC064853.3 NA 0.012 60-70% Testis 4.092488344 NA NA NA boxplot CTB-33G10.1 NA chr19 49719498 49720081 - 584 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTB-33G10.1 NA 0.588 70-80% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-312J18.6 NA chr1 160931739 160934380 - 2642 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-312J18.6 NA 0.035 40-50% Lung 3.117774221 HCC,Normal NA NA boxplot VN1R34P vomeronasal 1 receptor 34 pseudogene chr7 63934449 63935331 - 883 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=VN1R34P NA 0.024 0-10% Testis 4.906892038 Breast_cancer,Normal NA NA boxplot RP11-112L6.3 NA chr20 50162765 50166102 - 3338 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-112L6.3 NA 0.259 50-60% Testis 1.468319239 CRC,HCC,Normal,PAAD NA NA boxplot RP11-301L8.2 NA chr4 185587909 185594003 + 6095 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-301L8.2 NA 0.035 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-324E6.10 NA chr12 122634130 122634673 + 544 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-324E6.10 NA 0.024 60-70% NA NA CRC NA NA boxplot RP11-620J15.1 NA chr12 57837092 57842745 + 5654 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-620J15.1 NA 0.482 30-40% Testis 1.176551955 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot GTF2H2B general transcription factor IIH subunit 2B (pseudogene) chr5 70415352 70448015 + 32664 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GTF2H2B NA 0.976 0-10% NA NA CHD,CRC,HCC,Normal,PAAD CHD(up),CRC(up),HCC(up),PAAD(up) NA boxplot RP11-986G18.2 NA chr12 2740093 2742855 + 2763 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-986G18.2 NA 0.012 20-30% NA NA Breast_cancer,HCC NA NA boxplot RP11-338K17.6 NA chr12 123655528 123656128 + 601 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-338K17.6 NA 0.082 30-40% NA NA Breast_cancer,Normal,PAAD NA NA boxplot SPDYE12P speedy/RINGO cell cycle regulator family member E12, pseudogene chr7 74906673 74913256 - 6584 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SPDYE12P NA 0.071 20-30% NA NA Breast_cancer,Normal NA NA boxplot RP11-223P11.2 NA chr10 127013501 127026475 - 12975 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-223P11.2 NA 0.094 90-100% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot LINC01039 long intergenic non-protein coding RNA 1039 chr13 99577112 99580368 + 3257 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01039 NA 0.012 10-20% Testis 4.906892038 Breast_cancer NA NA boxplot RP11-271K11.5 NA chr17 31038575 31059121 - 20547 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-271K11.5 NA 0.082 50-60% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot CTD-2139B15.2 NA chr5 17353910 17354899 + 990 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2139B15.2 NA 0.824 0-10% Testis 4.906892038 CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot AC011330.13 NA chr15 43642389 43643023 - 635 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC011330.13 NA 0.059 70-80% NA NA CRC NA NA boxplot CROCCP4 ciliary rootlet coiled-coil, rootletin pseudogene 4 chr1 16740280 16750968 + 10689 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CROCCP4 NA 0.141 50-60% NA NA Breast_cancer,CHD,CRC,HCC,Normal NA NA boxplot CYP51A1P1 cytochrome P450 family 51 subfamily A member 1 pseudogene 1 chr3 82806515 82808021 - 1507 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CYP51A1P1 NA 0.353 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-553L6.2 NA chr3 114214313 114236204 + 21892 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-553L6.2 NA 0.259 40-50% Spleen 2.078480401 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-65M17.3 NA chr11 112393118 112621729 + 228612 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-65M17.3 NA 0.082 80-90% Testis 2.030454129 Breast_cancer,HCC,Normal NA NA boxplot LINC01089 long intergenic non-protein coding RNA 1089 chr12 121795267 121803906 - 8640 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01089 exo_circ_034092,exo_circ_037454,exo_circ_028395 0.976 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down) NA boxplot CAP2P1 CAP, adenylate cyclase-associated protein, 2 (yeast) pseudogene 1 chr14 89290205 89291594 - 1390 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CAP2P1 NA 0.165 40-50% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-1082L8.3 NA chr8 124811226 124857516 - 46291 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1082L8.3 NA 0.165 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC129492.6 NA chr17 8079482 8081565 + 2084 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC129492.6 NA 0.435 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot DPPA3P2 developmental pluripotency associated 3 pseudogene 2 chr14 36371165 36372383 + 1219 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DPPA3P2 NA 0.012 90-100% Testis 4.102976285 NA NA NA boxplot CDC42P6 cell division cycle 42 pseudogene 6 chr4 22727375 22727950 - 576 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CDC42P6 NA 1 0-10% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot AC073321.4 NA chr2 216604771 216611202 + 6432 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC073321.4 NA 0.012 0-10% Testis 4.17319241 Breast_cancer,Normal,PAAD NA NA boxplot ST3GAL4-AS1 ST3GAL4 antisense RNA 1 (head to head) chr11 126340889 126355587 - 14699 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ST3GAL4-AS1 NA 0.776 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot SUMO1P1 SUMO1 pseudogene 1 chr20 53875252 53875557 - 306 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SUMO1P1 NA 0.141 50-60% Testis 3.96928059 CRC,HCC,Normal NA NA boxplot CTC-255N20.1 NA chr5 147180204 147234859 - 54656 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-255N20.1 NA 0.012 60-70% Nerve 1.346661461 HCC NA NA boxplot CTD-2547E10.5 NA chr16 21401089 21401198 + 110 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2547E10.5 NA 0.129 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot UBE2SP2 ubiquitin conjugating enzyme E2S pseudogene 2 chr17 18677261 18677757 + 497 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=UBE2SP2 NA 0.576 30-40% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot AC226118.1 NA chr7 379359 382712 + 3354 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC226118.1 NA 0.341 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CTA-292E10.6 NA chr22 28800683 28848559 + 47877 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTA-292E10.6 NA 0.659 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot BMS1P11 BMS1, ribosome biogenesis factor pseudogene 11 chr9 64705734 64709311 - 3578 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=BMS1P11 NA 0.224 70-80% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-274B21.14 NA chr7 128574751 128622694 + 47944 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-274B21.14 exo_circ_022196 0.929 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),PAAD(up) NA boxplot RP11-395M19.1 NA chr4 104886118 104886955 - 838 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-395M19.1 exo_circ_054406 0.188 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot KHSRPP1 KH-type splicing regulatory protein pseudogene 1 chr9 21695176 21696943 + 1768 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KHSRPP1 NA 0.035 90-100% Testis 4.906892038 Breast_cancer,HCC,Normal NA NA boxplot ACTBP12 actin, beta pseudogene 12 chr1 92229018 92229435 - 418 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ACTBP12 NA 0.012 60-70% Testis 4.906892038 Breast_cancer NA NA boxplot CTD-2595P9.4 NA chr16 49847018 49847632 - 615 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2595P9.4 NA 0.024 80-90% NA NA Breast_cancer,HCC NA NA boxplot ZIM2-AS1 ZIM2 antisense RNA 1 chr19 56690686 56799646 + 108961 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ZIM2-AS1 NA 0.059 30-40% NA NA Breast_cancer,CHD,HCC,PAAD NA NA boxplot RP11-298I3.1 NA chr14 22929609 22955562 + 25954 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-298I3.1 NA 0.294 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot GTF2IP9 general transcription factor IIi pseudogene 9 chr7 66407288 66409239 - 1952 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GTF2IP9 NA 0.282 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-587P21.2 NA chr12 91877391 91880655 + 3265 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-587P21.2 NA 0.024 40-50% Testis 4.194335606 Normal,PAAD NA NA boxplot LLNLR-284B4.1 NA chr19 1010221 1010907 + 687 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LLNLR-284B4.1 NA 0.141 60-70% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot PKD1L2 polycystic kidney disease 1-like 2 (gene/pseudogene) chr16 81100875 81220370 - 119496 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PKD1L2 NA 0.094 30-40% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot KB-1107E3.1 NA chr8 101686547 101689093 + 2547 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KB-1107E3.1 NA 0.047 70-80% NA NA Normal NA NA boxplot CTD-2616J11.16 NA chr19 51340695 51344117 + 3423 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2616J11.16 NA 0.024 50-60% NA NA PAAD NA NA boxplot RP11-92A5.2 NA chr4 155206529 155209027 - 2499 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-92A5.2 NA 0.012 50-60% Breast 1.829437162 CRC NA NA boxplot RP11-117N2.2 NA chr12 96386818 96387194 - 377 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-117N2.2 NA 0.118 30-40% NA NA CRC,Normal NA NA boxplot RP11-403P17.3 NA chr16 66509437 66510048 + 612 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-403P17.3 NA 0.129 50-60% NA NA HCC,Normal NA NA boxplot RP11-305O4.3 NA chr3 136087475 136087913 - 439 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-305O4.3 NA 0.024 90-100% NA NA HCC,Normal,PAAD NA NA boxplot CTD-2591A1.1 NA chr5 54643557 54645987 + 2431 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2591A1.1 NA 0.059 40-50% NA NA Breast_cancer,CRC,Normal NA NA boxplot RPS7P3 ribosomal protein S7 pseudogene 3 chr1 233288868 233289447 - 580 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPS7P3 NA 0.953 40-50% NA NA CHD,CRC,HCC,Normal,PAAD CHD(down),CRC(down),PAAD(down) NA boxplot PKP4P1 plakophilin 4 pseudogene 1 chr2 209178966 209181123 + 2158 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PKP4P1 NA 0.082 90-100% Testis 4.11462709 Breast_cancer,HCC,Normal NA NA boxplot RP11-50D9.1 NA chr4 127812720 127813200 - 481 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-50D9.1 exo_circ_003749 0.906 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(up),HCC(up),PAAD(up) NA boxplot RP4-597N16.1 NA chr1 235097187 235097412 - 226 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-597N16.1 NA 0.012 80-90% Brain 4.906892038 Normal NA NA boxplot NUDT4P2 nudix hydrolase 4 pseudogene 2 chr1 146298170 146298715 + 546 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NUDT4P2 NA 0.635 0-10% NA NA CHD,CRC,HCC,Normal,PAAD CHD(up),CRC(up),HCC(up),PAAD(up) NA boxplot RP11-19P22.8 NA chr17 27625484 27626438 - 955 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-19P22.8 NA 0.212 10-20% NA NA Breast_cancer,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot BMS1P10 BMS1, ribosome biogenesis factor pseudogene 10 chr9 63372803 63380011 - 7209 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=BMS1P10 NA 0.565 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down),HCC(down) NA boxplot NUTF2P2 nuclear transport factor 2 pseudogene 2 chr14 35819837 35820220 + 384 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NUTF2P2 NA 0.012 80-90% NA NA CRC NA NA boxplot RP11-622C24.2 NA chr15 66860303 66867023 + 6721 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-622C24.2 NA 0.141 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot LINC00910 long intergenic non-protein coding RNA 910 chr17 43369845 43389199 - 19355 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00910 exo_circ_023448 0.859 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down),CRC(down) NA boxplot DLGAP1-AS2 DLGAP1 antisense RNA 2 chr18 3603000 3608336 + 5337 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DLGAP1-AS2 NA 0.318 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-340C20.3 NA chr13 100198187 100198469 - 283 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-340C20.3 NA 0.012 70-80% NA NA Normal NA NA boxplot LINC01137 long intergenic non-protein coding RNA 1137 chr1 37454879 37474411 - 19533 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01137 NA 0.871 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down) NA boxplot RPL3P7 ribosomal protein L3 pseudogene 7 chr6 108004357 108005568 - 1212 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL3P7 NA 0.247 80-90% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot AC016907.3 NA chr2 30051066 30143804 - 92739 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC016907.3 NA 0.094 70-80% Testis 2.560174077 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-680G24.6 NA chr16 15015828 15016390 - 563 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-680G24.6 NA 0.588 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-438F14.3 NA chr1 248548756 248563839 + 15084 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-438F14.3 NA 0.059 50-60% Testis 2.929835618 CRC,Normal,PAAD NA NA boxplot FEZF1-AS1 FEZF1 antisense RNA 1 chr7 122303658 122310077 + 6420 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FEZF1-AS1 NA 0.024 0-10% Brain 2.015166918 Breast_cancer,HCC NA NA boxplot RP11-266L9.3 NA chr16 25093387 25095255 + 1869 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-266L9.3 NA 0.012 50-60% Testis 2.557468271 Normal NA NA boxplot RP11-815J4.6 NA chr18 12073232 12076654 - 3423 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-815J4.6 NA 0.035 70-80% NA NA Breast_cancer,PAAD NA NA boxplot RP5-961K14.1 NA chrX 95973328 95974315 - 988 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-961K14.1 NA 0.082 60-70% NA NA HCC,Normal NA NA boxplot AC010086.1 NA chrY 21311268 21318895 + 7628 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC010086.1 NA 0.024 60-70% Spleen 4.149374396 HCC NA NA boxplot LINC00152 long intergenic non-protein coding RNA 152 chr2 87455368 87606805 + 151438 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00152 NA 1 0-10% NA NA CHD,CRC,HCC,Normal,PAAD CHD(down) Yes boxplot RN7SL832P RNA, 7SL, cytoplasmic 832, pseudogene chr2 10690344 10692099 + 1756 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RN7SL832P NA 0.059 60-70% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot RP1-34M23.5 NA chr1 34761426 34788097 - 26672 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-34M23.5 NA 0.141 40-50% Testis 4.906892038 CRC,HCC,Normal,PAAD NA NA boxplot RP11-388K12.3 NA chr8 93229659 93229916 + 258 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-388K12.3 NA 0.012 90-100% NA NA HCC NA NA boxplot RP13-1016M1.2 NA chr4 1550284 1550572 + 289 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP13-1016M1.2 NA 0.035 50-60% NA NA Breast_cancer,HCC,Normal NA NA boxplot JAZF1-AS1 JAZF1 antisense RNA 1 chr7 28180322 28243917 + 63596 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=JAZF1-AS1 NA 0.494 20-30% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot RP11-1080G15.1 NA chr8 19084992 19259469 - 174478 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1080G15.1 NA 0.129 30-40% Testis 4.33808869 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot GCNT6 glucosaminyl (N-acetyl) transferase 6 chr6 10633762 10634695 + 934 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GCNT6 NA 0.082 40-50% NA NA CRC,HCC,Normal NA NA boxplot AC022210.2 NA chr2 84915868 84916660 + 793 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC022210.2 exo_circ_014978 0.412 90-100% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC037445.1 NA chr17 63193930 63339053 - 145124 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC037445.1 NA 0.071 70-80% Testis 4.3879358 HCC,Normal NA NA boxplot RP1-111D6.3 NA chr6 149217926 149245554 + 27629 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-111D6.3 NA 0.047 60-70% Brain 4.37830883 HCC,Normal NA NA boxplot OR9P1P olfactory receptor family 9 subfamily P member 1 pseudogene chr7 143047213 143047580 - 368 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=OR9P1P NA 0.012 80-90% NA NA CRC NA NA boxplot LLNLR-268E12.1 NA chr19 39812972 39813555 - 584 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LLNLR-268E12.1 NA 0.035 40-50% NA NA CRC NA NA boxplot KRT16P6 keratin 16 pseudogene 6 chr17 16817983 16822579 - 4597 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KRT16P6 NA 0.012 80-90% NA NA Breast_cancer,Normal NA NA boxplot AC016682.1 NA chr2 150171423 150301080 + 129658 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC016682.1 exo_circ_053532 0.012 50-60% Testis 4.906892038 PAAD NA NA boxplot RP11-467J12.3 NA chr16 53010395 53011286 - 892 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-467J12.3 NA 0.024 60-70% NA NA Normal NA NA boxplot AF178030.2 NA chr8 115509602 115511325 + 1724 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AF178030.2 NA 0.012 90-100% Testis 3.591645202 HCC,Normal NA NA boxplot GSTA7P glutathione S-transferase alpha 7, pseudogene chr6 52739590 52744656 - 5067 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GSTA7P NA 0.106 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP3-441A12.1 NA chr6 37815777 37819218 - 3442 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-441A12.1 NA 0.129 50-60% Testis 3.004556083 CRC,HCC,Normal,PAAD NA NA boxplot RP11-178C3.8 NA chr17 60025859 60030746 + 4888 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-178C3.8 NA 0.012 40-50% NA NA NA NA NA boxplot RP11-25L3.1 NA chr18 73921939 73922631 - 693 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-25L3.1 NA 0.012 80-90% NA NA Normal NA NA boxplot AC016738.4 NA chr2 100993676 101002244 - 8569 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC016738.4 NA 0.106 40-50% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot RPL13AP6 ribosomal protein L13a pseudogene 6 chr10 110936622 110937233 - 612 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL13AP6 NA 0.071 90-100% NA NA Breast_cancer,CHD,CRC,Normal,PAAD NA NA boxplot RP11-567O18.1 NA chr11 130285023 130285833 - 811 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-567O18.1 NA 0.106 40-50% Testis 3.395986536 CRC,HCC,Normal,PAAD NA NA boxplot RP11-283I3.6 NA chr12 273954 277123 - 3170 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-283I3.6 NA 0.894 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down),HCC(down),PAAD(down) NA boxplot AC090616.2 NA chr17 32141226 32143135 - 1910 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC090616.2 NA 0.212 70-80% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-175B9.3 NA chr1 202471864 202472117 - 254 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-175B9.3 NA 0.929 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-44F21.5 NA chr4 75081702 75084717 - 3016 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-44F21.5 NA 0.118 10-20% NA NA CRC,HCC,Normal,PAAD NA NA boxplot BIRC6-AS1 BIRC6 antisense RNA 1 chr2 32377631 32379599 - 1969 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=BIRC6-AS1 NA 0.035 50-60% NA NA CRC,HCC,PAAD NA NA boxplot RP11-556H2.3 NA chr16 79090050 79101754 + 11705 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-556H2.3 NA 0.635 10-20% NA NA CRC,HCC,Normal,PAAD CHD(down),PAAD(up) NA boxplot HMGB3P24 high mobility group box 3 pseudogene 24 chr9 36303499 36304924 - 1426 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HMGB3P24 NA 0.024 50-60% NA NA CRC,HCC NA NA boxplot HNRNPA1P21 heterogeneous nuclear ribonucleoprotein A1 pseudogene 21 chr3 39334979 39335939 + 961 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HNRNPA1P21 NA 0.141 10-20% Spleen 2.471420514 CHD,CRC,HCC,Normal,PAAD NA NA boxplot RPL13AP5 ribosomal protein L13a pseudogene 5 chr10 96750288 96750899 + 612 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL13AP5 exo_circ_019064,exo_circ_050716 1 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CRC(down) NA boxplot AC007795.1 NA chr19 28869796 28879170 + 9375 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC007795.1 NA 0.012 0-10% Testis 4.906892038 PAAD NA NA boxplot RP11-1348G14.7 NA chr16 28773824 28777534 - 3711 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1348G14.7 NA 0.035 30-40% NA NA CRC,HCC NA NA boxplot RP11-23J9.5 NA chr9 97238449 97297314 + 58866 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-23J9.5 NA 0.329 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP5-906A24.1 NA chr17 39165073 39167849 + 2777 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-906A24.1 NA 0.094 20-30% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot CTD-2540B15.9 NA chr19 33305036 33309387 + 4352 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2540B15.9 NA 0.047 80-90% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot RP11-431D12.1 NA chr8 136489448 136529876 + 40429 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-431D12.1 NA 0.035 40-50% NA NA Breast_cancer,CRC,PAAD NA NA boxplot RP11-175I6.1 NA chr9 42667506 42668887 - 1382 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-175I6.1 NA 0.082 50-60% NA NA HCC,Normal NA NA boxplot HTR7P1 5-hydroxytryptamine (serotonin) receptor 7 pseudogene 1 chr12 13000420 13004830 + 4411 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HTR7P1 NA 0.8 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-127B20.3 NA chr4 82374301 82384027 + 9727 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-127B20.3 NA 0.153 40-50% NA NA Breast_cancer,CRC,Normal,PAAD NA NA boxplot EIF5A2P1 eukaryotic translation initiation factor 5A2 pseudogene 1 chr15 72041194 72041653 - 460 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=EIF5A2P1 NA 0.024 50-60% NA NA HCC,Normal,PAAD NA NA boxplot RP11-645C24.6 NA chr16 21833516 21833621 + 106 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-645C24.6 NA 0.071 90-100% NA NA CRC,HCC,Normal NA NA boxplot RP11-545P7.9 NA chr12 113249466 113250042 + 577 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-545P7.9 NA 0.012 20-30% NA NA CRC,PAAD NA NA boxplot PCBP2-OT1 PCBP2 overlapping transcript 1 chr12 53464468 53465057 + 590 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PCBP2-OT1 NA 0.153 40-50% NA NA CHD,CRC,HCC,Normal,PAAD NA Yes boxplot RP11-403P17.4 NA chr16 66549280 66551189 + 1910 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-403P17.4 NA 0.153 70-80% NA NA CRC,HCC,Normal NA NA boxplot MID1IP1-AS1 MID1IP1 antisense RNA 1 chrX 38801568 38803883 - 2316 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MID1IP1-AS1 NA 0.059 70-80% NA NA CRC,HCC,Normal NA NA boxplot AC010504.2 NA chr19 34348356 34359412 - 11057 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC010504.2 NA 0.082 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-791M20.1 NA chrX 13093660 13094573 + 914 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-791M20.1 NA 0.012 90-100% Spleen 3.236558487 Normal NA NA boxplot DNM3-IT1 DNM3 intronic transcript 1 chr1 171864187 171864687 + 501 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DNM3-IT1 exo_circ_015633,exo_circ_035477,exo_circ_053073,exo_circ_036735,exo_circ_035710,exo_circ_053074,exo_circ_030846,exo_circ_043092 0.271 40-50% Testis 4.52414176 CRC,HCC,Normal,PAAD NA NA boxplot RP11-374M1.11 NA chr9 61858710 61858908 + 199 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-374M1.11 NA 0.012 10-20% NA NA NA NA NA boxplot CTB-39G8.3 NA chr17 45396932 45397477 + 546 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTB-39G8.3 NA 0.447 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CTD-2330K9.3 NA chr3 49903845 49916937 + 13093 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2330K9.3 NA 0.035 30-40% Testis 2.488288996 Breast_cancer,CRC,HCC,PAAD NA NA boxplot FAM66A family with sequence similarity 66 member A chr8 12362019 12388296 + 26278 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FAM66A NA 0.141 30-40% NA NA Breast_cancer,CHD,CRC,HCC,Normal NA NA boxplot RP11-486O13.2 NA chr14 70187123 70230187 + 43065 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-486O13.2 NA 0.588 10-20% Testis 4.466448867 CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down) NA boxplot USP9YP21 ubiquitin specific peptidase 9, Y-linked pseudogene 21 chrY 25933833 25935881 - 2049 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=USP9YP21 NA 0.012 80-90% NA NA HCC NA NA boxplot RP11-844P9.4 NA chr5 176203314 176203710 - 397 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-844P9.4 NA 0.012 70-80% Testis 4.906892038 NA NA NA boxplot LINC00994 long intergenic non-protein coding RNA 994 chr3 64078361 64087363 - 9003 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00994 NA 0.012 90-100% NA NA Breast_cancer,Normal NA NA boxplot MIR7-3HG MIR7-3 host gene chr19 4769140 4772533 + 3394 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MIR7-3HG NA 0.012 90-100% Pituitary 4.771316461 Breast_cancer,CRC NA NA boxplot RPL34P21 ribosomal protein L34 pseudogene 21 chr11 130082495 130082781 - 287 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL34P21 NA 0.024 70-80% Brain 4.906892038 CRC,Normal NA NA boxplot RP1-206D15.5 NA chr1 169474060 169474159 - 100 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-206D15.5 NA 0.012 40-50% NA NA NA NA NA boxplot HAS2-AS1 HAS2 antisense RNA 1 chr8 121639293 121644693 + 5401 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HAS2-AS1 exo_circ_010452 0.024 60-70% Testis 1.644882626 Breast_cancer,Normal,PAAD NA NA boxplot CTA-363E6.6 NA chr16 19476916 19487899 - 10984 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTA-363E6.6 exo_circ_008568 0.929 0-10% Whole Blood 3.357389013 Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot AC006159.4 NA chr7 116563594 116571234 - 7641 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC006159.4 NA 0.024 10-20% Kidney 4.097255841 PAAD NA NA boxplot RP11-63E9.1 NA chr6 141447011 141451006 + 3996 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-63E9.1 NA 0.012 70-80% NA NA Normal NA NA boxplot MTCYBP3 MT-CYB pseudogene 3 chr13 95694569 95695705 + 1137 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MTCYBP3 NA 0.106 30-40% Fallopian Tube 4.906892038 CRC,HCC,Normal NA NA boxplot RP5-1142A6.5 NA chr16 88696501 88698610 + 2110 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-1142A6.5 NA 0.388 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-349G13.1 NA chr15 65475318 65475614 - 297 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-349G13.1 NA 0.082 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RPS23P6 ribosomal protein S23 pseudogene 6 chr16 12081237 12081902 + 666 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPS23P6 NA 0.059 70-80% NA NA CRC,HCC,Normal NA NA boxplot RP1-228H13.1 NA chr1 40333078 40333557 - 480 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-228H13.1 NA 0.282 90-100% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC005789.9 NA chr19 38385522 38386759 + 1238 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC005789.9 NA 0.012 90-100% NA NA PAAD NA NA boxplot RPLP1P6 ribosomal protein, large, P1 pseudogene 6 chr5 151765859 151766378 - 520 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPLP1P6 NA 0.329 20-30% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-945C19.4 NA chr18 5887487 5909122 + 21636 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-945C19.4 NA 0.012 20-30% Testis 3.553678748 HCC NA NA boxplot PGBD4P8 piggyBac transposable element derived 4 pseudogene 8 chr1 60097415 60097976 + 562 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PGBD4P8 NA 0.024 10-20% Testis 4.906892038 Normal NA NA boxplot SEPT4-AS1 SEPT4 antisense RNA 1 chr17 58519837 58556977 + 37141 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SEPT4-AS1 NA 0.494 20-30% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-996F15.6 NA chr12 29332733 29333383 - 651 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-996F15.6 NA 0.2 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-299J3.6 NA chr3 122416882 122417012 - 131 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-299J3.6 NA 0.012 90-100% NA NA NA NA NA boxplot AC073115.6 NA chr7 45969657 45980191 + 10535 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC073115.6 NA 0.294 20-30% Testis 4.034856261 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot LINC01588 long intergenic non-protein coding RNA 1588 chr14 49927571 50092643 - 165073 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01588 exo_circ_030326,exo_circ_056969 0.929 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down),PAAD(down) NA boxplot RP11-596D21.1 NA chr14 31248628 31302739 + 54112 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-596D21.1 NA 0.059 90-100% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot RP11-47A8.5 NA chr10 102642792 102644140 - 1349 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-47A8.5 NA 0.506 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-266L9.5 NA chr16 25066937 25068943 + 2007 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-266L9.5 NA 0.4 20-30% Testis 1.060782307 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-499F3.1 NA chr15 81633887 81642190 - 8304 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-499F3.1 NA 0.024 0-10% NA NA Normal NA NA boxplot RP1-65P5.3 NA chr11 32097143 32105091 - 7949 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-65P5.3 NA 0.082 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot LINC01252 long intergenic non-protein coding RNA 1252 chr12 11548030 11590369 + 42340 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01252 NA 0.176 70-80% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP13-104F24.1 NA chr17 64749918 64758603 - 8686 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP13-104F24.1 exo_circ_051933 0.859 20-30% NA NA CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-575L7.8 NA chr9 83972233 83975777 + 3545 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-575L7.8 NA 0.776 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down) NA boxplot CD46P1 CD46 molecule pseudogene 1 chr1 207645234 207657410 + 12177 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CD46P1 NA 0.718 10-20% Spleen 4.113883484 CHD,CRC,HCC,Normal,PAAD CHD(down),CRC(down) NA boxplot RP4-537K23.4 NA chrX 129869064 129957528 - 88465 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-537K23.4 NA 0.047 80-90% NA NA Breast_cancer,Normal NA NA boxplot RP11-923I11.6 NA chr12 51817899 51820150 + 2252 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-923I11.6 NA 0.024 0-10% NA NA Breast_cancer,Normal NA NA boxplot RP1-229K20.5 NA chr6 41269875 41270239 - 365 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-229K20.5 NA 0.047 70-80% Whole Blood 3.485040047 CRC,Normal NA NA boxplot LA16c-431H6.7 NA chr16 1688355 1690536 + 2182 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LA16c-431H6.7 NA 0.071 20-30% NA NA CRC,HCC,Normal NA NA boxplot EIF2B5-IT1 EIF2B5 intronic transcript 1 chr3 184505113 184508399 + 3287 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=EIF2B5-IT1 NA 0.012 70-80% NA NA Breast_cancer,HCC NA NA boxplot RP11-696L21.2 NA chr15 68833830 68834749 + 920 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-696L21.2 NA 0.024 60-70% NA NA Breast_cancer,Normal NA NA boxplot CTC-510F12.7 NA chr19 11221083 11221573 + 491 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-510F12.7 NA 0.094 50-60% NA NA HCC,Normal,PAAD NA NA boxplot RP1-168L15.5 NA chr6 166383189 166384824 + 1636 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-168L15.5 NA 0.035 10-20% NA NA Breast_cancer,HCC,PAAD NA NA boxplot RP11-175K6.2 NA chr5 159106380 159108617 + 2238 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-175K6.2 NA 0.341 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RPL39P5 ribosomal protein L39 pseudogene 5 chr3 134351852 134356561 - 4710 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL39P5 NA 0.012 50-60% NA NA NA NA NA boxplot SH3PXD2A-AS1 SH3PXD2A antisense RNA 1 chr10 103745966 103755423 + 9458 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SH3PXD2A-AS1 NA 0.106 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CEBPA-AS1 CEBPA antisense RNA 1 (head to head) chr19 33302857 33305054 + 2198 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CEBPA-AS1 NA 0.612 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-12M9.3 NA chr22 41064052 41064633 + 582 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-12M9.3 NA 0.859 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-116D2.1 NA chr2 20999313 21000917 - 1605 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-116D2.1 NA 0.012 10-20% Liver 4.637269915 HCC NA NA boxplot RP11-1078H9.2 NA chr14 90567495 90569976 + 2482 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1078H9.2 NA 0.012 70-80% NA NA Breast_cancer,HCC NA NA boxplot RP11-680A11.5 NA chr12 53298655 53300314 - 1660 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-680A11.5 NA 0.341 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot HNRNPA1P27 heterogeneous nuclear ribonucleoprotein A1 pseudogene 27 chrX 100887636 100888590 - 955 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HNRNPA1P27 NA 0.165 10-20% Skin 1.186756774 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot MTRNR2L2 MT-RNR2-like 2 chr5 80650000 80650086 - 87 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MTRNR2L2 NA 0.082 60-70% NA NA CHD,HCC,Normal,PAAD NA NA boxplot RP11-106M7.1 NA chr10 114764788 114779903 + 15116 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-106M7.1 NA 0.047 50-60% Brain 1.344736322 Breast_cancer,Normal,PAAD NA NA boxplot CTC-550B14.7 NA chr19 55006193 55048086 + 41894 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-550B14.7 NA 0.294 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-98L12.2 NA chr14 76013679 76014143 + 465 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-98L12.2 NA 0.012 10-20% NA NA NA NA NA boxplot RP11-490O6.2 NA chr16 11741910 11744506 + 2597 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-490O6.2 NA 0.153 60-70% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot RP1-29C18.9 NA chr22 49572264 49575426 - 3163 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-29C18.9 exo_circ_011592,exo_circ_058193,exo_circ_052371 0.329 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-231C14.8 NA chr16 29380242 29380345 + 104 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-231C14.8 NA 0.024 50-60% NA NA HCC,Normal,PAAD NA NA boxplot AC022201.5 NA chr2 70301451 70302072 + 622 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC022201.5 NA 0.071 70-80% NA NA HCC,Normal NA NA boxplot AC018799.1 NA chr2 194344269 194419645 + 75377 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC018799.1 NA 0.024 10-20% Brain 4.368096532 HCC,Normal NA NA boxplot FAM138C family with sequence similarity 138 member C chr9 34394 35871 - 1478 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FAM138C NA 0.035 40-50% Testis 3.579831288 CHD,PAAD NA NA boxplot RP11-85G18.6 NA chr10 27243130 27250804 + 7675 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-85G18.6 NA 0.012 80-90% NA NA Breast_cancer NA NA boxplot RP11-417L19.5 NA chr12 131896500 131898239 + 1740 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-417L19.5 NA 0.153 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot PWAR6 Prader Willi/Angelman region RNA 6 chr15 25031873 25036490 + 4618 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PWAR6 NA 0.647 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(up) NA boxplot CTD-3065J16.9 NA chr8 144078002 144079265 - 1264 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-3065J16.9 NA 0.494 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CTD-2162K18.4 NA chr19 36773153 36777078 + 3926 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2162K18.4 NA 0.2 50-60% Testis 2.246133653 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-413E6.11 NA chr3 75624899 75625188 + 290 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-413E6.11 NA 0.059 40-50% NA NA Normal,PAAD NA NA boxplot RP11-361H10.3 NA chr14 76235817 76263474 + 27658 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-361H10.3 NA 0.106 80-90% NA NA CRC,HCC,Normal NA NA boxplot LINC00469 long intergenic non-protein coding RNA 469 chr17 73750330 73828520 - 78191 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00469 NA 0.071 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC074141.3 NA chr19 51860242 51863236 - 2995 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC074141.3 NA 0.4 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot ZNF969P zinc finger protein 969, pseudogene chr4 110415898 110418504 + 2607 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ZNF969P NA 0.035 80-90% NA NA Breast_cancer,HCC,PAAD NA NA boxplot AC002398.13 NA chr19 35769144 35771028 - 1885 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC002398.13 NA 0.106 80-90% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-218M22.2 NA chr12 674801 684127 - 9327 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-218M22.2 NA 0.176 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-666O2.5 NA chr16 28602340 28604519 + 2180 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-666O2.5 NA 0.059 80-90% NA NA Breast_cancer,CRC,HCC,PAAD NA NA boxplot LINC01277 long intergenic non-protein coding RNA 1277 chr6 142966421 143038077 - 71657 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01277 NA 0.153 50-60% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-211N8.2 NA chr9 62532337 62534724 + 2388 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-211N8.2 NA 0.129 70-80% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-738E22.3 NA chr4 56960927 56961373 - 447 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-738E22.3 NA 0.035 60-70% NA NA HCC,PAAD NA NA boxplot RP11-809N8.2 NA chr11 73395559 73396436 - 878 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-809N8.2 NA 0.224 50-60% NA NA CRC,HCC,Normal NA NA boxplot CES1P1 carboxylesterase 1 pseudogene 1 chr16 55760548 55794158 + 33611 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CES1P1 NA 0.553 30-40% Liver 1.525029996 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC078883.4 NA chr2 172427774 172428603 - 830 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC078883.4 NA 0.212 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot SMG1P5 SMG1 pseudogene 5 chr16 30267553 30335374 - 67822 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SMG1P5 NA 0.988 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CRC(up),HCC(up),PAAD(up) NA boxplot CTD-2649C14.1 NA chr16 21998310 21999656 + 1347 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2649C14.1 NA 0.012 90-100% Testis 4.313546029 Normal NA NA boxplot RP11-15B17.1 NA chr4 99950006 100195099 + 245094 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-15B17.1 exo_circ_013851 0.541 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-359J6.1 NA chr9 86414282 86414570 + 289 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-359J6.1 NA 0.059 80-90% Testis 4.906892038 CRC,HCC,Normal,PAAD NA NA boxplot CTA-963H5.5 NA chr22 30653877 30654814 - 938 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTA-963H5.5 NA 0.4 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RPL7P4 ribosomal protein L7 pseudogene 4 chr6 30696806 30697535 - 730 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL7P4 NA 0.012 70-80% Testis 4.509468902 NA NA NA boxplot LINC01091 long intergenic non-protein coding RNA 1091 chr4 123650267 123930406 + 280140 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01091 NA 0.165 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-606M12.1 NA chr2 112439312 112469687 - 30376 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-606M12.1 NA 0.035 80-90% NA NA CRC,PAAD NA NA boxplot RP5-965F6.2 NA chr1 112177234 112360528 - 183295 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-965F6.2 NA 0.082 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot TRIM60P18 tripartite motif containing 60 pseudogene 18 chr7 64355078 64356199 + 1122 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TRIM60P18 NA 0.6 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down) NA boxplot AC005625.1 NA chr19 38361795 38362484 - 690 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC005625.1 NA 0.035 80-90% Testis 4.623561906 CRC,PAAD NA NA boxplot RP11-341N2.1 NA chr2 242087351 242088457 - 1107 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-341N2.1 NA 0.071 30-40% NA NA CRC,Normal,PAAD NA NA boxplot ALOX12P1 arachidonate 12-lipoxygenase pseudogene 1 chr17 30529688 30542416 + 12729 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ALOX12P1 NA 0.035 80-90% Testis 2.053962111 Breast_cancer,CRC,HCC NA NA boxplot RP13-565O16.2 NA chrX 135180255 135194679 - 14425 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP13-565O16.2 NA 0.035 10-20% Testis 2.456564143 Breast_cancer,Normal NA NA boxplot UBE2V1P2 ubiquitin conjugating enzyme E2 variant 1 pseudogene 2 chr3 175718231 175718670 - 440 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=UBE2V1P2 NA 0.976 10-20% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot CTD-2308L22.1 NA chr2 221572506 221574454 + 1949 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2308L22.1 NA 0.118 70-80% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot RP4-753D10.5 NA chr20 23010209 23030785 - 20577 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-753D10.5 NA 0.012 50-60% Testis 4.410235051 Breast_cancer,CRC NA NA boxplot RP11-537H15.3 NA chr9 34084332 34096225 + 11894 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-537H15.3 NA 0.012 90-100% NA NA HCC NA NA boxplot LINC00301 long intergenic non-protein coding RNA 301 chr11 60615736 60687149 + 71414 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00301 NA 0.071 70-80% Testis 4.906892038 Breast_cancer,HCC,Normal,PAAD NA NA boxplot RSU1P2 Ras suppressor protein 1 pseudogene 2 chr10 45099487 45154596 - 55110 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RSU1P2 NA 0.024 70-80% Testis 4.724399816 Breast_cancer,Normal,PAAD NA NA boxplot FLJ35934 FLJ35934 chr17 18411159 18414380 + 3222 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FLJ35934 NA 0.376 40-50% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-162A12.3 NA chr18 76884935 76888724 - 3790 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-162A12.3 NA 0.012 90-100% NA NA Breast_cancer NA NA boxplot RP11-108M9.2 NA chr1 16855407 16859284 + 3878 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-108M9.2 NA 0.012 0-10% Testis 4.906892038 Normal NA NA boxplot RP11-452L6.6 NA chr16 31470204 31472108 - 1905 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-452L6.6 NA 0.318 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot LINC01165 long intergenic non-protein coding RNA 1165 chr10 132520827 132522449 - 1623 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01165 NA 0.024 90-100% NA NA Breast_cancer,CRC NA NA boxplot STAG3L4 stromal antigen 3-like 4 (pseudogene) chr7 67302621 67321526 + 18906 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=STAG3L4 NA 0.965 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot AP000432.1 NA chr21 17611744 17633199 + 21456 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AP000432.1 NA 0.329 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-61L23.2 NA chr7 143761790 143836933 - 75144 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-61L23.2 NA 0.835 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CRC(up),HCC(up),PAAD(up) NA boxplot AC006262.6 NA chr19 46203426 46214837 + 11412 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC006262.6 NA 0.059 10-20% NA NA Breast_cancer,HCC,PAAD NA NA boxplot C20orf197 chromosome 20 open reading frame 197 chr20 60055925 60072953 + 17029 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=C20orf197 exo_circ_040680,exo_circ_052272 0.694 10-20% NA NA CRC,HCC,Normal,PAAD CHD(down),PAAD(up) NA boxplot LINC00689 long intergenic non-protein coding RNA 689 chr7 159006522 159030195 + 23674 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00689 NA 0.035 30-40% NA NA Breast_cancer,CRC,Normal NA NA boxplot HNRNPH1P1 heterogeneous nuclear ribonucleoprotein H1 pseudogene 1 chr6 159712801 159713985 - 1185 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HNRNPH1P1 NA 0.141 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-637N19.1 NA chr18 6394847 6398020 - 3174 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-637N19.1 NA 0.082 40-50% NA NA Breast_cancer,CRC,Normal,PAAD NA NA boxplot CH17-353B19.1 NA chr1 146235806 146237807 + 2002 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CH17-353B19.1 NA 0.365 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RPSAP12 ribosomal protein SA pseudogene 12 chr12 68552995 68553882 - 888 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPSAP12 NA 1 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up),CRC(down) NA boxplot RP11-579O24.1 NA chr17 58897776 58899692 + 1917 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-579O24.1 NA 0.012 60-70% Testis 4.203718585 NA NA NA boxplot CTB-193M12.3 NA chr16 15683290 15684570 + 1281 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTB-193M12.3 NA 0.165 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP1-151F17.2 NA chr6 16764346 16766883 + 2538 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-151F17.2 NA 0.4 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot P2RX6P purinergic receptor P2X, ligand gated ion channel, 6 pseudogene chr22 21035243 21045017 - 9775 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=P2RX6P NA 0.071 80-90% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RPL21P1 ribosomal protein L21 pseudogene 1 chr12 122364780 122365629 + 850 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL21P1 NA 0.012 90-100% Skin 4.906892038 CHD NA NA boxplot RP11-67K19.3 NA chr9 116568449 116586328 + 17880 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-67K19.3 NA 0.035 60-70% Testis 4.444694712 PAAD NA NA boxplot CTD-2537I9.12 NA chr19 55661901 55674715 - 12815 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2537I9.12 NA 0.082 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot LINC01592 long intergenic non-protein coding RNA 1592 chr8 68911803 69104190 - 192388 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01592 NA 0.047 10-20% NA NA HCC,Normal NA NA boxplot EIF3LP3 eukaryotic translation initiation factor 3 subunit L pseudogene 3 chr10 38080056 38080877 - 822 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=EIF3LP3 NA 0.035 90-100% NA NA CHD,CRC,Normal,PAAD NA NA boxplot RAD21-AS1 RAD21 antisense RNA 1 chr8 116874424 116876868 + 2445 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RAD21-AS1 NA 0.965 30-40% Testis 1.417904988 CHD,CRC,HCC,Normal,PAAD CHD(up) NA boxplot AC022153.1 NA chr19 27902595 27984743 + 82149 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC022153.1 NA 0.012 80-90% Testis 1.485191316 Breast_cancer,PAAD NA NA boxplot OSTM1-AS1 OSTM1 antisense RNA 1 chr6 108123515 108159392 + 35878 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=OSTM1-AS1 NA 0.012 90-100% Brain 4.040281248 Breast_cancer,HCC NA NA boxplot AC011997.1 NA chr2 197693106 197774823 + 81718 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC011997.1 NA 0.024 80-90% NA NA Breast_cancer,CRC NA NA boxplot KLHL7-AS1 KLHL7 antisense RNA 1 (head to head) chr7 23101228 23105703 - 4476 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KLHL7-AS1 NA 0.106 50-60% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot LINC01217 long intergenic non-protein coding RNA 1217 chr4 100778582 100791235 - 12654 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01217 NA 0.153 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-77G23.2 NA chr10 75003055 75025174 - 22120 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-77G23.2 NA 0.176 70-80% Testis 4.906892038 CRC,Normal,PAAD NA NA boxplot RP5-1182A14.7 NA chr1 16739938 16750589 - 10652 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-1182A14.7 NA 0.235 80-90% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP13-507P19.2 NA chr12 131347470 131367555 + 20086 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP13-507P19.2 NA 0.012 90-100% Testis 2.757368974 Breast_cancer,PAAD NA NA boxplot LINC00957 long intergenic non-protein coding RNA 957 chr7 44039171 44042306 + 3136 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00957 NA 0.894 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down),CRC(down),PAAD(down) NA boxplot RP11-661A12.9 NA chr8 143573490 143577397 + 3908 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-661A12.9 NA 0.235 70-80% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC004067.5 NA chr4 109692004 109692703 + 700 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC004067.5 NA 0.318 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot HMGB1P20 high mobility group box 1 pseudogene 20 chr6 53235621 53236297 - 677 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HMGB1P20 NA 0.129 10-20% Testis 4.157063412 CRC,HCC,Normal,PAAD NA NA boxplot EIF1P3 eukaryotic translation initiation factor 1 pseudogene 3 chr1 182336001 182336334 + 334 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=EIF1P3 NA 0.153 80-90% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP5-1086K13.1 NA chr1 116493016 116499212 - 6197 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-1086K13.1 NA 0.153 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot STAG3L2 stromal antigen 3-like 2 (pseudogene) chr7 74882163 74890610 - 8448 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=STAG3L2 NA 0.906 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down),CRC(up),PAAD(up) NA boxplot RP11-290F5.2 NA chr4 184340756 184353977 - 13222 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-290F5.2 NA 0.365 30-40% Adrenal Gland 2.338130475 CRC,HCC,Normal,PAAD NA NA boxplot CTC-260E6.4 NA chr19 20220597 20222186 - 1590 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-260E6.4 exo_circ_046344 0.212 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot SMC2-AS1 SMC2 antisense RNA 1 (head to head) chr9 104080024 104093073 - 13050 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SMC2-AS1 NA 0.082 30-40% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot RP11-353N14.7 NA chr17 79952663 79952992 + 330 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-353N14.7 NA 0.035 80-90% NA NA Breast_cancer,HCC,PAAD NA NA boxplot DKFZp779M0652 uncharacterized DKFZp779M0652 chr11 45771432 45772358 + 927 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DKFZp779M0652 NA 0.176 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot SOCS5P4 suppressor of cytokine signaling 5 pseudogene 4 chrX 71043214 71045470 - 2257 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SOCS5P4 NA 0.165 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-49I11.2 NA chr18 36273574 36274599 + 1026 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-49I11.2 NA 0.012 20-30% NA NA Breast_cancer NA NA boxplot GUSBP9 glucuronidase, beta pseudogene 9 chr5 71197646 71208130 - 10485 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GUSBP9 NA 0.965 0-10% NA NA CHD,CRC,HCC,Normal,PAAD CRC(up),PAAD(up) NA boxplot CH17-340M24.3 uncharacterized protein BC009467 chrX 154424380 154428479 - 4100 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CH17-340M24.3 NA 0.753 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP1-267L14.6 NA chr12 112018804 112019430 - 627 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-267L14.6 NA 0.071 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-384C4.6 NA chr1 212297448 212299579 + 2132 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-384C4.6 NA 0.082 30-40% NA NA Breast_cancer,CRC,Normal,PAAD NA NA boxplot AC159540.3 NA chr2 97301729 97304151 + 2423 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC159540.3 NA 0.012 20-30% Testis 4.906892038 PAAD NA NA boxplot RP11-4K16.2 NA chr8 119215111 119246848 - 31738 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-4K16.2 NA 0.059 50-60% Testis 2.23229312 HCC,Normal,PAAD NA NA boxplot RP11-433J20.1 NA chr10 4051726 4089013 + 37288 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-433J20.1 NA 0.141 60-70% Testis 1.649820021 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-622C24.1 NA chr15 66808404 66810560 + 2157 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-622C24.1 NA 0.012 0-10% NA NA Breast_cancer,HCC NA NA boxplot AL109761.5 NA chr21 17793488 17810845 + 17358 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AL109761.5 NA 0.059 80-90% NA NA HCC,Normal,PAAD NA NA boxplot WAC-AS1 WAC antisense RNA 1 (head to head) chr10 28522652 28532743 - 10092 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=WAC-AS1 NA 1 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-426D19.1 NA chr17 57277920 57280017 + 2098 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-426D19.1 NA 0.118 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot C3P1 complement component 3 precursor pseudogene chr19 10037803 10074135 + 36333 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=C3P1 exo_circ_046316 0.353 10-20% Liver 4.883277343 Breast_cancer,CHD,CRC,HCC,Normal,PAAD HCC(up) NA boxplot RP11-481K16.2 NA chr4 143555082 143555583 - 502 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-481K16.2 NA 0.024 10-20% NA NA Normal NA NA boxplot RP11-347C12.9 NA chr16 30214409 30214699 + 291 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-347C12.9 NA 0.047 60-70% NA NA CRC,HCC,PAAD NA NA boxplot RP11-713P17.3 NA chr11 134032272 134046849 + 14578 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-713P17.3 NA 0.153 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot LINC01426 long intergenic non-protein coding RNA 1426 chr21 34745757 34784886 + 39130 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01426 NA 0.035 50-60% NA NA Breast_cancer,HCC,PAAD NA NA boxplot OR52K3P olfactory receptor family 52 subfamily K member 3 pseudogene chr11 4474813 4475755 + 943 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=OR52K3P NA 0.365 20-30% Whole Blood 2.222041867 Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-162G10.5 NA chr10 37857740 37859110 + 1371 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-162G10.5 NA 0.153 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot PSMA3-AS1 PSMA3 antisense RNA 1 chr14 58265365 58298134 - 32770 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PSMA3-AS1 exo_circ_035636 1 0-10% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot CTB-102L5.7 NA chr19 38184376 38186265 + 1890 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTB-102L5.7 NA 0.082 40-50% NA NA Breast_cancer,CRC,Normal,PAAD NA NA boxplot FGF10-AS1 FGF10 antisense RNA 1 chr5 44388732 44413989 + 25258 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FGF10-AS1 NA 0.012 20-30% NA NA CRC NA NA boxplot RP11-22B10.3 NA chrX 51856968 51858066 + 1099 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-22B10.3 NA 0.059 70-80% NA NA CRC,Normal,PAAD NA NA boxplot RP11-755E23.2 NA chr11 93286629 93288903 - 2275 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-755E23.2 NA 0.047 10-20% NA NA CRC,Normal NA NA boxplot HOXB-AS2 HOXB cluster antisense RNA 2 chr17 48557262 48560333 + 3072 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HOXB-AS2 NA 0.035 70-80% NA NA Breast_cancer,CRC,HCC,PAAD NA NA boxplot TSPOAP1-AS1 NA chr17 58325450 58415766 + 90317 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TSPOAP1-AS1 NA 0.929 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot HERC2P5 hect domain and RLD 2 pseudogene 5 chr16 32741314 32776196 + 34883 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HERC2P5 NA 0.294 60-70% Testis 1.164139697 Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot SC22CB-1E7.1 NA chr22 32039490 32039896 + 407 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SC22CB-1E7.1 NA 0.918 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(down),PAAD(down) NA boxplot AC009784.3 NA chr7 136092925 136437426 + 344502 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC009784.3 NA 0.341 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot HLCS-IT1 HLCS intronic transcript 1 chr21 36803984 36806284 - 2301 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HLCS-IT1 NA 0.047 30-40% Testis 1.316971842 Breast_cancer,CRC,Normal,PAAD NA NA boxplot RP3-510H16.3 NA chr22 35298838 35299541 - 704 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-510H16.3 NA 0.012 90-100% NA NA Breast_cancer,Normal NA NA boxplot RP4-781K5.2 NA chr1 234607008 234609483 + 2476 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-781K5.2 NA 0.329 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot RP11-864G5.1 NA chr11 102295060 102295806 + 747 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-864G5.1 NA 0.012 40-50% NA NA Normal NA NA boxplot TERC telomerase RNA component chr3 169764520 169765060 - 541 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TERC NA 0.988 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up),PAAD(up) NA boxplot RP13-270P17.3 NA chr18 3246401 3247086 - 686 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP13-270P17.3 NA 0.706 10-20% NA NA CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-1H8.1 NA chr15 34409625 34410594 + 970 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1H8.1 NA 0.012 80-90% NA NA HCC NA NA boxplot AC006372.6 NA chr7 157513294 157516841 + 3548 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC006372.6 NA 0.024 80-90% Testis 3.78612797 Breast_cancer,Normal NA NA boxplot C1orf132 chromosome 1 open reading frame 132 chr1 207801518 207879096 - 77579 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=C1orf132 exo_circ_018392,exo_circ_020073 0.835 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down),CRC(up),HCC(down) NA boxplot RP11-561O4.1 NA chr3 107104911 107107000 - 2090 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-561O4.1 NA 0.024 80-90% NA NA Breast_cancer,PAAD NA NA boxplot RP11-65F13.3 NA chr5 93600357 93603598 + 3242 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-65F13.3 NA 0.024 20-30% NA NA PAAD NA NA boxplot RP11-325K4.2 NA chr16 56941028 56941726 + 699 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-325K4.2 NA 0.059 90-100% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-153F1.1 NA chr1 103418079 103525483 - 107405 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-153F1.1 NA 0.024 70-80% Testis 4.065201602 CRC NA NA boxplot RP11-57C13.6 NA chr10 87607985 87659279 + 51295 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-57C13.6 NA 0.012 70-80% Testis 2.23890146 Breast_cancer NA NA boxplot CSTP1 cystatin pseudogene 1 chr20 23918771 23922169 - 3399 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CSTP1 NA 0.012 20-30% Testis 4.406495699 Normal NA NA boxplot GNG5P2 guanine nucleotide binding protein (G protein), gamma 5 pseudogene 2 chrX 110346703 110346909 - 207 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GNG5P2 NA 0.012 90-100% Pituitary 3.491739028 CRC,HCC,Normal,PAAD NA NA boxplot RP11-454E5.4 NA chr12 51201684 51202581 - 898 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-454E5.4 NA 0.353 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot LLPH-AS1 LLPH antisense RNA 1 (head to head) chr12 66130751 66134449 + 3699 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LLPH-AS1 NA 0.129 20-30% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot HIF1A-AS2 HIF1A antisense RNA 2 chr14 61715558 61751097 - 35540 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HIF1A-AS2 NA 0.082 70-80% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot GUSBP1 glucuronidase, beta pseudogene 1 chr6 57919912 57961382 - 41471 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GUSBP1 NA 1 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot LCN1P1 lipocalin 1 pseudogene 1 chr9 133224905 133228591 - 3687 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LCN1P1 NA 0.059 70-80% Ovary 1.039382453 Breast_cancer,HCC,PAAD NA NA boxplot RPL32P1 ribosomal protein L32 pseudogene 1 chr6 33079451 33079860 + 410 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL32P1 NA 0.294 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot HCG21 HLA complex group 21 (non-protein coding) chr6 30945979 30954862 - 8884 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HCG21 NA 0.035 90-100% Testis 2.49979477 Breast_cancer,CRC,HCC,PAAD NA NA boxplot RP11-483L5.1 NA chr11 11570084 11573782 + 3699 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-483L5.1 NA 0.259 20-30% Kidney 1.088238487 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RPL7AP15 ribosomal protein L7a pseudogene 15 chr1 147223554 147224348 + 795 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL7AP15 NA 0.035 90-100% NA NA Normal NA NA boxplot PEBP1P2 phosphatidylethanolamine binding protein 1 pseudogene 2 chr2 85341281 85341838 - 558 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PEBP1P2 exo_circ_015909 0.082 80-90% NA NA Breast_cancer,HCC,Normal NA NA boxplot RP11-625L16.3 NA chr12 24830421 24836558 + 6138 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-625L16.3 NA 0.012 10-20% NA NA CRC,HCC,PAAD NA NA boxplot RP11-267N12.1 NA chr1 163161675 163213023 + 51349 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-267N12.1 NA 0.012 10-20% NA NA Normal NA NA boxplot RP11-1081L13.4 NA chr11 18706537 18740568 + 34032 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1081L13.4 NA 0.106 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC026471.6 NA chr16 31487370 31488492 - 1123 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC026471.6 NA 0.012 30-40% Testis 3.762638366 Normal NA NA boxplot RP5-872K7.7 NA chr20 21148741 21162890 - 14150 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-872K7.7 NA 0.012 50-60% Testis 1.980494944 Breast_cancer,CRC,HCC NA NA boxplot RP4-798A17.5 NA chr1 171345089 171345320 + 232 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-798A17.5 NA 0.082 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-9H20.2 NA chr18 44732575 44733315 + 741 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-9H20.2 exo_circ_052039 0.106 60-70% NA NA Breast_cancer,CRC,Normal NA NA boxplot RP11-203L2.4 NA chr9 68822403 68843275 - 20873 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-203L2.4 NA 0.024 40-50% Testis 4.906892038 CRC,HCC NA NA boxplot RP11-700J17.1 NA chr4 44693946 44694386 - 441 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-700J17.1 NA 0.059 50-60% NA NA CRC,HCC,Normal NA NA boxplot AC007036.4 NA chr7 30140870 30141417 + 548 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC007036.4 NA 0.047 70-80% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot RP11-446N19.1 NA chr12 46537502 46652550 + 115049 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-446N19.1 exo_circ_028437,exo_circ_051060,exo_circ_022685 0.788 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down),HCC(down) NA boxplot RPS3AP47 ribosomal protein S3a pseudogene 47 chr15 43115702 43116493 - 792 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPS3AP47 NA 1 0-10% NA NA CHD,CRC,HCC,Normal,PAAD CRC(down),HCC(down),PAAD(down) NA boxplot CTD-2012K14.3 NA chr16 67542123 67542963 - 841 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2012K14.3 NA 0.753 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CTD-3092A11.3 NA chr15 30507377 30513698 + 6322 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-3092A11.3 NA 0.929 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(up),HCC(up),PAAD(up) NA boxplot RP11-98D18.1 NA chr1 151701026 151708386 + 7361 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-98D18.1 NA 0.071 30-40% NA NA CRC,HCC,Normal NA NA boxplot AC139100.4 NA chr18 80161752 80162413 + 662 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC139100.4 NA 0.047 30-40% NA NA Normal,PAAD NA NA boxplot D21S2088E D21S2088E chr21 23361104 23384861 - 23758 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=D21S2088E NA 0.024 30-40% NA NA CHD,Normal NA NA boxplot RP11-6N17.2 NA chr17 47879472 47882398 - 2927 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-6N17.2 NA 0.024 20-30% NA NA Breast_cancer,CRC,HCC NA NA boxplot RP11-483H20.4 NA chr9 129640476 129641282 + 807 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-483H20.4 NA 0.035 50-60% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot CTD-2619J13.23 NA chr19 58475355 58475763 - 409 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2619J13.23 NA 0.024 40-50% NA NA Breast_cancer,PAAD NA NA boxplot RP11-243M5.2 NA chr12 130976786 130978812 + 2027 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-243M5.2 NA 0.024 90-100% NA NA CRC NA NA boxplot RP11-359I18.5 NA chr3 58490830 58491291 - 462 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-359I18.5 NA 0.294 40-50% Testis 2.032264413 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot HMGB1P14 high mobility group box 1 pseudogene 14 chr14 58284773 58285363 + 591 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HMGB1P14 NA 0.082 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-216N14.9 NA chr1 153750983 153752176 - 1194 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-216N14.9 NA 0.035 60-70% Testis 3.741112667 CRC,HCC,Normal NA NA boxplot RP11-229P13.19 NA chr9 136975094 136976981 + 1888 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-229P13.19 NA 0.318 30-40% Spleen 1.442805829 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-106D4.2 NA chr16 87470370 87474370 - 4001 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-106D4.2 NA 0.071 30-40% NA NA Breast_cancer,CRC,PAAD NA NA boxplot RP11-320G24.1 NA chrX 40262917 40287720 + 24804 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-320G24.1 NA 0.035 20-30% Adrenal Gland 3.256739575 HCC,Normal,PAAD NA NA boxplot RP3-414A15.12 NA chr14 73580694 73582918 + 2225 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-414A15.12 NA 0.129 60-70% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot CADM3-AS1 CADM3 antisense RNA 1 chr1 159194325 159207973 - 13649 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CADM3-AS1 NA 0.482 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down) NA boxplot RP11-805J14.5 NA chr11 70206291 70207390 - 1100 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-805J14.5 NA 0.482 10-20% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot FAM99A family with sequence similarity 99 member A (non-protein coding) chr11 1665597 1667856 + 2260 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FAM99A NA 0.047 10-20% Liver 4.819254693 Breast_cancer,CRC,Normal,PAAD NA NA boxplot RP11-431M7.3 NA chr4 36244116 36274220 + 30105 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-431M7.3 NA 0.247 60-70% Testis 3.288510933 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-395G23.3 NA chr8 106270144 106272899 + 2756 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-395G23.3 exo_circ_044694,exo_circ_033635 0.576 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot ZBTB45P1 zinc finger and BTB domain containing 45 pseudogene 1 chr2 109986939 109988394 - 1456 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ZBTB45P1 NA 0.024 90-100% NA NA CRC,HCC NA NA boxplot FGF13-AS1 FGF13 antisense RNA 1 chrX 138711452 138716617 + 5166 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FGF13-AS1 NA 0.012 0-10% NA NA Breast_cancer,CHD NA NA boxplot GLYATL1P1 glycine-N-acyltransferase like 1 pseudogene 1 chr11 58978787 58994120 + 15334 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GLYATL1P1 NA 0.247 10-20% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot CTA-253N17.1 NA chr1 185171335 185171710 - 376 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTA-253N17.1 NA 0.024 10-20% NA NA Normal NA NA boxplot RP11-278C7.5 NA chr12 32736930 32737660 - 731 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-278C7.5 NA 0.047 60-70% NA NA CRC,HCC,Normal NA NA boxplot PFN1P6 profilin 1 pseudogene 6 chr1 144442606 144443004 + 399 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PFN1P6 NA 0.035 30-40% NA NA CRC,HCC NA NA boxplot RP11-88G17.6 NA chr9 130140610 130144219 - 3610 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-88G17.6 NA 0.035 90-100% NA NA Breast_cancer,CRC,Normal NA NA boxplot ISCA1P4 iron-sulfur cluster assembly 1 pseudogene 4 chr15 40948736 40948869 - 134 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ISCA1P4 NA 0.047 60-70% Testis 3.650251337 CRC,PAAD NA NA boxplot RP11-126K1.2 NA chr1 151280024 151281929 - 1906 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-126K1.2 NA 0.306 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-66H6.4 NA chr16 11056556 11057034 + 479 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-66H6.4 NA 0.082 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-535A19.1 NA chr11 75800877 75803415 - 2539 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-535A19.1 NA 0.059 30-40% Testis 3.637563583 Breast_cancer,HCC,Normal NA NA boxplot ZDHHC4P1 zinc finger, DHHC-type containing 4 pseudogene 1 chr13 42933858 42934892 + 1035 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ZDHHC4P1 NA 0.024 80-90% NA NA CRC,Normal NA NA boxplot RP11-79L9.2 NA chr3 138643874 138644694 - 821 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-79L9.2 NA 0.035 70-80% NA NA CRC,Normal NA NA boxplot RP11-296I10.3 NA chr16 70156340 70173448 - 17109 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-296I10.3 NA 0.329 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot NIFK-AS1 NIFK antisense RNA 1 chr2 121649650 121728481 + 78832 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NIFK-AS1 NA 0.988 0-10% NA NA CHD,CRC,HCC,Normal,PAAD CHD(down) NA boxplot WHAMMP2 WAS protein homolog associated with actin, golgi membranes and microtubules pseudogene 2 chr15 28737583 28759204 + 21622 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=WHAMMP2 NA 0.988 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down),HCC(down),PAAD(down) NA boxplot GS1-204I12.4 uncharacterized LOC105371653 chr1 185655002 185657168 + 2167 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GS1-204I12.4 NA 0.012 80-90% NA NA CRC,Normal NA NA boxplot RP1-68D18.4 NA chr11 35210343 35214985 - 4643 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-68D18.4 NA 0.329 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot LINC00839 long intergenic non-protein coding RNA 839 chr10 42475543 42495336 + 19794 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00839 NA 0.447 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot TMX2P1 thioredoxin-related transmembrane protein 2 pseudogene 1 chr9 37885683 37886390 + 708 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TMX2P1 NA 0.682 20-30% NA NA CHD,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot CTD-2325M2.1 NA chr19 8008729 8016025 + 7297 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2325M2.1 NA 0.247 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot GS1-251I9.3 uncharacterized LOC105375636 chr8 91016588 91018655 + 2068 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GS1-251I9.3 NA 0.271 50-60% Testis 4.906892038 CRC,HCC,Normal,PAAD NA NA boxplot RP11-632K20.2 NA chr15 32494003 32500346 - 6344 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-632K20.2 NA 0.929 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(up),HCC(up),PAAD(up) NA boxplot TVP23CP1 TVP23C pseudogene 1 chr7 90631906 90632568 + 663 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TVP23CP1 exo_circ_031860,exo_circ_046915,exo_circ_033616 0.106 70-80% NA NA CRC,HCC,Normal,PAAD NA NA boxplot GRK5-IT1 GRK5 intronic transcript 1 chr10 119208531 119211760 + 3230 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GRK5-IT1 NA 0.106 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot AC074289.1 NA chr2 64143239 64252859 + 109621 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC074289.1 NA 0.812 10-20% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(up),HCC(up) NA boxplot PMS2P7 PMS1 homolog 2, mismatch repair system component pseudogene 7 chr7 73005541 73021103 + 15563 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PMS2P7 NA 0.812 30-40% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot FCGR2C Fc fragment of IgG, low affinity IIc, receptor for (CD32) (gene/pseudogene) chr1 161581339 161605662 + 24324 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FCGR2C NA 0.953 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down),CRC(up) NA boxplot RP11-1250I15.1 NA chr5 34124162 34124385 - 224 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1250I15.1 NA 0.035 60-70% NA NA Normal NA NA boxplot RPS20P22 ribosomal protein S20 pseudogene 22 chr8 38434347 38435664 - 1318 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPS20P22 NA 0.047 10-20% NA NA CRC,Normal,PAAD NA NA boxplot RPL23AP88 ribosomal protein L23a pseudogene 88 chr2 242175181 242175634 + 454 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL23AP88 NA 0.341 70-80% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-254I22.2 NA chr5 96247776 96278751 + 30976 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-254I22.2 exo_circ_049665 0.012 80-90% Esophagus 4.906892038 Normal NA NA boxplot RP3-508I15.21 NA chr22 38742625 38743115 + 491 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-508I15.21 NA 0.247 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-254F7.4 NA chr2 10120734 10121065 + 332 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-254F7.4 NA 0.082 70-80% NA NA CRC,Normal NA NA boxplot CTD-2026K11.1 NA chr15 75676227 75677162 + 936 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2026K11.1 NA 0.059 70-80% NA NA Breast_cancer,HCC,PAAD NA NA boxplot RP11-94A24.1 NA chr8 122414332 122428551 - 14220 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-94A24.1 NA 0.765 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down) NA boxplot SMARCE1P3 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 pseudogene 3 chr14 21162513 21163743 + 1231 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SMARCE1P3 NA 0.024 20-30% NA NA Breast_cancer,HCC,PAAD NA NA boxplot RP11-429O2.1 NA chr8 25141394 25141968 - 575 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-429O2.1 NA 0.012 90-100% NA NA PAAD NA NA boxplot CTD-2318O12.1 NA chr12 9415641 9416718 + 1078 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2318O12.1 NA 0.012 80-90% NA NA Breast_cancer,CRC NA NA boxplot RP1-127D3.4 NA chr1 171199244 171227788 - 28545 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-127D3.4 NA 0.035 70-80% Testis 3.533922163 CRC,Normal,PAAD NA NA boxplot AP005530.2 NA chr18 14195 16898 - 2704 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AP005530.2 NA 0.176 60-70% NA NA CRC,HCC,PAAD NA NA boxplot RP11-332M2.1 NA chr3 129847048 129847957 - 910 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-332M2.1 NA 0.918 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down) NA boxplot ST13P3 suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein) pseudogene 3 chr12 106015897 106017006 + 1110 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ST13P3 NA 0.965 20-30% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down),CRC(down),PAAD(down) NA boxplot BMPR1APS2 bone morphogenetic protein receptor type IA pseudogene 2 chr11 121361854 121362865 - 1012 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=BMPR1APS2 NA 0.106 70-80% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot RP11-21B23.1 NA chr16 50368580 50371480 + 2901 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-21B23.1 NA 0.235 70-80% Testis 2.750684545 CRC,HCC,Normal,PAAD NA NA boxplot RP11-946L16.2 NA chr12 29156448 29156991 - 544 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-946L16.2 NA 0.035 80-90% NA NA CRC,HCC,Normal NA NA boxplot RP11-46D1.2 NA chr18 48755693 48756318 + 626 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-46D1.2 NA 0.035 20-30% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot ZNF723P zinc finger protein 723, pseudogene chr19 22832201 22859422 + 27222 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ZNF723P NA 0.035 10-20% NA NA Breast_cancer,HCC NA NA boxplot NPM1P42 nucleophosmin 1 (nucleolar phosphoprotein B23, numatrin) pseudogene 42 chr15 72899399 72900260 - 862 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NPM1P42 NA 0.012 70-80% NA NA PAAD NA NA boxplot RP11-98J9.1 NA chr11 13785390 13848002 + 62613 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-98J9.1 NA 0.012 80-90% Testis 4.906892038 CRC NA NA boxplot ZFAND6P1 zinc finger, AN1-type domain 6 pseudogene 1 chr9 35449748 35450352 + 605 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ZFAND6P1 NA 0.024 90-100% NA NA CHD,Normal NA NA boxplot RP11-122F24.1 NA chr5 6933670 7190812 + 257143 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-122F24.1 NA 0.012 20-30% Pituitary 3.853435047 Breast_cancer,Normal NA NA boxplot RP11-764I5.1 NA chr3 141258418 141258779 + 362 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-764I5.1 NA 0.012 90-100% Testis 4.906892038 NA NA NA boxplot RP11-34F13.3 NA chr15 67832725 67873866 + 41142 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-34F13.3 NA 0.047 70-80% Testis 4.906892038 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-295D4.1 NA chr16 4335870 4337818 - 1949 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-295D4.1 NA 0.153 80-90% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-95G6.1 NA chr13 28495633 28497267 + 1635 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-95G6.1 NA 0.282 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-505K9.3 NA chr16 84119293 84121153 + 1861 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-505K9.3 NA 0.012 70-80% NA NA Breast_cancer,HCC NA NA boxplot CUBNP3 cubilin (intrinsic factor-cobalamin receptor) pseudogene 3 chr10 45127318 45148914 + 21597 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CUBNP3 NA 0.012 90-100% Testis 4.479043996 Breast_cancer,CHD NA NA boxplot RP11-348H3.8 NA chr1 212916787 212917577 + 791 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-348H3.8 NA 0.012 90-100% NA NA NA NA NA boxplot RP11-1079H9.1 NA chr14 86014686 86062960 - 48275 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1079H9.1 NA 0.012 30-40% Testis 4.906892038 HCC,PAAD NA NA boxplot MIR940 microRNA 940 chr16 2268155 2273418 + 5264 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MIR940 NA 0.094 70-80% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot RPL7P44 ribosomal protein L7 pseudogene 44 chr13 76981175 76981916 - 742 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL7P44 NA 0.012 70-80% NA NA NA NA NA boxplot ADAD1P2 adenosine deaminase domain containing 1 pseudogene 2 chr18 50063795 50064440 + 646 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ADAD1P2 NA 0.012 40-50% NA NA PAAD NA NA boxplot PRKXP1 protein kinase, X-linked, pseudogene 1 chr15 100553529 100558954 - 5426 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PRKXP1 NA 0.294 20-30% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-368I7.4 NA chr16 89682620 89686569 - 3950 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-368I7.4 NA 0.165 40-50% Testis 1.514248517 CRC,HCC,Normal,PAAD NA NA boxplot CTA-390C10.10 NA chr22 25476218 25479971 + 3754 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTA-390C10.10 NA 0.282 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CTB-14A14.2 NA chr5 181114106 181115674 + 1569 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTB-14A14.2 NA 0.012 90-100% Thyroid 4.906892038 Breast_cancer NA NA boxplot RP11-354M20.3 NA chr10 118017487 118045810 + 28324 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-354M20.3 NA 0.047 90-100% NA NA CRC,HCC,Normal NA NA boxplot MTND4P14 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 pseudogene 14 chr9 5107937 5109290 + 1354 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MTND4P14 NA 0.141 60-70% Testis 1.100912828 CRC,HCC,Normal,PAAD NA NA boxplot ALG1L13P asparagine-linked glycosylation 1-like 13, pseudogene chr8 8236003 8244667 - 8665 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ALG1L13P NA 0.471 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD PAAD(up) NA boxplot CTD-2203K17.1 NA chr5 33424025 33440619 - 16595 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2203K17.1 NA 0.212 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot LINC00184 long intergenic non-protein coding RNA 184 chr1 234629311 234634780 + 5470 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00184 NA 0.024 70-80% NA NA Breast_cancer,CRC,HCC NA NA boxplot ERICH3-AS1 ERICH3 antisense RNA 1 chr1 74577430 74626098 + 48669 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ERICH3-AS1 NA 0.012 70-80% NA NA Breast_cancer,HCC NA NA boxplot CTC-265F19.1 NA chr19 2641838 2643853 - 2016 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-265F19.1 NA 0.071 80-90% NA NA Breast_cancer,CRC,Normal NA NA boxplot RP11-433J22.3 NA chr1 147777590 147788953 + 11364 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-433J22.3 NA 0.035 60-70% Kidney 4.200570346 HCC,PAAD NA NA boxplot RP11-116A1.1 NA chr5 89581209 89677701 + 96493 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-116A1.1 NA 0.188 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot NEBL-AS1 NEBL antisense RNA 1 chr10 21174014 21175048 + 1035 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NEBL-AS1 NA 0.035 80-90% NA NA Breast_cancer,CRC,Normal,PAAD NA NA boxplot ZNF271P zinc finger protein 271, pseudogene chr18 35290282 35310766 + 20485 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ZNF271P NA 1 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-290D2.6 NA chr13 45340039 45341183 + 1145 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-290D2.6 NA 0.929 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),PAAD(down) NA boxplot FLJ42969 uncharacterized LOC441374 chr8 101052054 101076251 + 24198 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FLJ42969 NA 0.106 70-80% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot RP13-36G14.4 NA chrX 74009389 74011468 - 2080 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP13-36G14.4 NA 0.094 10-20% NA NA HCC,Normal NA NA boxplot RP11-113C12.4 NA chr12 8320381 8369555 + 49175 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-113C12.4 NA 0.047 90-100% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot RP11-2L8.2 NA chr3 177954066 177959798 - 5733 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-2L8.2 NA 0.035 30-40% Brain 4.906892038 HCC,Normal NA NA boxplot LINC01341 long intergenic non-protein coding RNA 1341 chr1 246776013 246792385 + 16373 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01341 NA 0.412 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot LDHAP2 lactate dehydrogenase A pseudogene 2 chr1 235738005 235738989 + 985 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LDHAP2 NA 0.106 50-60% NA NA Normal,PAAD NA NA boxplot RP11-958N24.2 NA chr16 16356224 16377507 + 21284 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-958N24.2 NA 0.835 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD PAAD(up) NA boxplot CTD-2527I21.7 NA chr19 34998233 35000170 - 1938 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2527I21.7 NA 0.059 70-80% NA NA Breast_cancer,HCC,Normal NA NA boxplot CTD-3214H19.6 NA chr19 7633766 7636990 - 3225 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-3214H19.6 NA 0.835 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-352M15.2 NA chr12 45718046 45727775 - 9730 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-352M15.2 NA 0.929 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP1-212G6.4 NA chrX 47718002 47719099 - 1098 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-212G6.4 NA 0.012 40-50% NA NA HCC NA NA boxplot E2F3P1 E2F transcription factor 3 pseudogene 1 chr17 35490009 35491238 + 1230 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=E2F3P1 NA 0.047 60-70% NA NA Breast_cancer,CHD,CRC,Normal,PAAD NA NA boxplot RP11-556I13.2 NA chr7 143220468 143222267 - 1800 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-556I13.2 NA 0.035 0-10% NA NA HCC,Normal NA NA boxplot RP3-453P22.2 NA chr1 7382487 7389754 - 7268 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-453P22.2 NA 0.012 80-90% Testis 4.906892038 CRC NA NA boxplot RP11-439M11.1 NA chr2 6905724 6906301 - 578 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-439M11.1 NA 0.059 50-60% Spleen 1.865071728 CRC,HCC,Normal,PAAD NA NA boxplot RP11-135A1.2 NA chr3 194130616 194131201 - 586 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-135A1.2 NA 0.012 90-100% NA NA CRC NA NA boxplot AC093323.3 NA chr4 6673451 6676047 + 2597 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC093323.3 NA 0.929 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-690C23.5 NA chr1 246527030 246528155 + 1126 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-690C23.5 NA 0.2 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-1018N14.1 NA chr17 51312609 51335165 - 22557 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1018N14.1 NA 0.024 20-30% Testis 4.906892038 Breast_cancer,PAAD NA NA boxplot AC009133.15 NA chr16 29806496 29807732 - 1237 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC009133.15 NA 0.576 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot CTD-2192J16.11 NA chr19 12552597 12553644 + 1048 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2192J16.11 NA 0.071 30-40% NA NA Normal,PAAD NA NA boxplot AC005796.2 NA chr19 17871273 17871705 - 433 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC005796.2 NA 0.012 10-20% NA NA PAAD NA NA boxplot TAAR3 trace amine associated receptor 3 (gene/pseudogene) chr6 132608225 132609302 - 1078 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TAAR3 NA 0.024 50-60% NA NA Normal,PAAD NA NA boxplot RP11-631M6.3 NA chr5 61347126 61347716 + 591 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-631M6.3 exo_circ_049569 0.212 20-30% NA NA CRC,Normal,PAAD NA NA boxplot GCSHP3 glycine cleavage system protein H (aminomethyl carrier) pseudogene 3 chr2 206116110 206116500 - 391 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GCSHP3 NA 0.447 40-50% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot CTD-2373J6.2 NA chr5 90410000 90410669 + 670 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2373J6.2 NA 0.082 10-20% NA NA CRC,HCC,Normal NA NA boxplot RP11-606P2.1 NA chr4 163932526 163933182 + 657 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-606P2.1 NA 0.012 20-30% NA NA PAAD NA NA boxplot MIR193BHG MIR193B host gene chr16 14301389 14326744 + 25356 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MIR193BHG NA 0.059 20-30% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot LINC00624 long intergenic non-protein coding RNA 624 chr1 147258885 147517875 - 258991 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00624 NA 0.082 60-70% Testis 4.506258561 CRC,HCC,Normal,PAAD NA NA boxplot AC010983.1 NA chr2 195003711 195026370 - 22660 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC010983.1 NA 0.024 60-70% Testis 4.906892038 PAAD NA NA boxplot RP11-320L11.2 NA chr11 86283927 86284668 + 742 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-320L11.2 NA 0.471 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot AC105760.2 NA chr2 237059434 237085817 - 26384 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC105760.2 NA 0.247 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-413N10.3 NA chr11 6821942 6926877 - 104936 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-413N10.3 NA 0.059 50-60% NA NA Breast_cancer,HCC,PAAD NA NA boxplot DUSP8P4 dual specificity phosphatase 8 pseudogene 4 chr10 47564256 47566016 + 1761 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DUSP8P4 NA 0.059 60-70% Cervix 4.906892038 CRC,Normal,PAAD NA NA boxplot AC112229.1 NA chr2 110360608 110363737 - 3130 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC112229.1 NA 0.118 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RPS27P25 ribosomal protein S27 pseudogene 25 chr12 120369440 120371688 + 2249 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPS27P25 NA 0.012 50-60% Pituitary 2.621457056 Breast_cancer NA NA boxplot XXbac-BPG55C20.7 NA chr6 57965630 57972218 + 6589 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=XXbac-BPG55C20.7 NA 0.059 50-60% NA NA Breast_cancer,CRC,Normal NA NA boxplot GIMAP3P GTPase, IMAP family member 3 pseudogene chr7 150746893 150747728 - 836 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GIMAP3P NA 0.071 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP1-95L4.4 NA chr6 143342246 143343383 + 1138 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-95L4.4 NA 0.294 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot SH3GL1P2 SH3-domain GRB2-like 1 pseudogene 2 chr17 30624413 30625494 + 1082 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SH3GL1P2 NA 0.059 50-60% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot AC006369.2 NA chr2 37600136 37646698 + 46563 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC006369.2 NA 0.624 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-367J7.3 NA chr1 157691762 157696459 + 4698 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-367J7.3 NA 0.153 60-70% Testis 4.122845421 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-384M15.3 NA chr16 72084857 72087443 + 2587 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-384M15.3 NA 0.153 50-60% NA NA Normal,PAAD NA NA boxplot CTD-2509G16.3 NA chr14 65234515 65235101 - 587 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2509G16.3 NA 0.047 60-70% NA NA Breast_cancer,CRC,HCC,PAAD NA NA boxplot EIF1P6 eukaryotic translation initiation factor 1 pseudogene 6 chr19 4347780 4349061 - 1282 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=EIF1P6 NA 0.035 80-90% NA NA Breast_cancer,CRC,PAAD NA NA boxplot BSN-AS2 BSN antisense RNA 2 (head to head) chr3 49549306 49554366 - 5061 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=BSN-AS2 NA 0.035 70-80% Testis 3.08711239 Breast_cancer,Normal,PAAD NA NA boxplot RP11-288E14.2 NA chr11 93535468 93535816 + 349 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-288E14.2 NA 0.176 80-90% NA NA CRC,HCC,Normal,PAAD NA NA boxplot HMGN2P35 high mobility group nucleosomal binding domain 2 pseudogene 35 chr10 96915633 96915902 - 270 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HMGN2P35 NA 0.012 80-90% NA NA Normal NA NA boxplot RP4-616B8.4 NA chr20 38961925 38962111 - 187 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-616B8.4 NA 0.082 70-80% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AGAP12P ArfGAP with GTPase domain, ankyrin repeat and PH domain 12, pseudogene chr10 48009873 48031640 - 21768 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AGAP12P NA 0.529 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-839D17.3 NA chr11 113278437 113314437 - 36001 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-839D17.3 NA 0.035 60-70% NA NA Breast_cancer,CRC,HCC NA NA boxplot CTD-2012I17.1 NA chr4 134759399 134817289 + 57891 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2012I17.1 NA 0.012 0-10% Fallopian Tube 4.906892038 PAAD NA NA boxplot CTD-2201I18.1 uncharacterized LOC101929215 chr5 80052374 80083654 - 31281 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2201I18.1 NA 0.153 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot MRPL35P1 mitochondrial ribosomal protein L35 pseudogene 1 chr6 13949095 13949666 + 572 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MRPL35P1 NA 0.012 10-20% NA NA NA NA NA boxplot CH17-189H20.1 NA chr1 149176022 149251013 + 74992 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CH17-189H20.1 NA 0.882 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-648O15.1 NA chr11 87094734 87096585 - 1852 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-648O15.1 NA 0.012 90-100% Testis 2.457542374 NA NA NA boxplot CTC-281F24.1 NA chr17 6653464 6655009 - 1546 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-281F24.1 NA 0.059 50-60% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot DSCR9 Down syndrome critical region 9 (non-protein coding) chr21 37208503 37221736 + 13234 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DSCR9 NA 0.082 30-40% Testis 3.287577472 Breast_cancer,CRC,Normal,PAAD NA NA boxplot RP11-55L4.2 NA chr17 9638768 9645325 - 6558 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-55L4.2 NA 0.012 40-50% NA NA Breast_cancer,HCC NA NA boxplot RP11-96H17.1 NA chr16 63056786 63129654 - 72869 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-96H17.1 NA 0.012 10-20% NA NA HCC NA NA boxplot bP-2189O9.2 NA chr21 8857260 8880976 + 23717 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=bP-2189O9.2 NA 0.918 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down) NA boxplot CTD-3184A7.4 NA chr20 63627227 63628824 + 1598 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-3184A7.4 NA 0.812 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot PPIAP3 peptidylprolyl isomerase A (cyclophilin A) pseudogene 3 chr20 37530039 37530543 + 505 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PPIAP3 NA 0.035 20-30% Testis 2.909785317 HCC,Normal NA NA boxplot RP4-660H19.1 NA chr1 72748921 72899140 - 150220 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-660H19.1 NA 0.012 90-100% Testis 3.202514356 NA NA NA boxplot VWA8-AS1 VWA8 antisense RNA 1 (head to head) chr13 41955808 41981565 + 25758 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=VWA8-AS1 NA 0.012 50-60% NA NA Breast_cancer NA NA boxplot RTN3P1 reticulon 3 pseudogene 1 chr4 145375543 145376253 + 711 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RTN3P1 NA 0.965 0-10% NA NA CHD,CRC,HCC,Normal,PAAD CHD(down) NA boxplot AC195454.1 NA chr4 40316485 40330419 + 13935 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC195454.1 NA 0.035 80-90% NA NA Breast_cancer,CRC NA NA boxplot HSPA8P11 heat shock protein family A (Hsp70) member 8 pseudogene 11 chr8 30237382 30240997 + 3616 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HSPA8P11 NA 0.012 50-60% NA NA Normal NA NA boxplot ISCA1P1 iron-sulfur cluster assembly 1 pseudogene 1 chr5 62776877 62777263 - 387 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ISCA1P1 NA 0.988 0-10% NA NA CHD,CRC,HCC,Normal,PAAD CHD(down) NA boxplot CTD-2600H12.2 NA chr16 48343755 48346058 - 2304 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2600H12.2 NA 0.047 60-70% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot CTD-2574D22.7 NA chr16 29862760 29863417 + 658 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2574D22.7 NA 0.212 70-80% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot AC093110.3 NA chr2 54661011 54680045 - 19035 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC093110.3 NA 0.647 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-1007O24.2 NA chr15 72465128 72466262 - 1135 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1007O24.2 NA 0.094 80-90% NA NA CRC,HCC,Normal NA NA boxplot TRMT2B-AS1 TRMT2B antisense RNA 1 chrX 101043564 101094476 - 50913 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TRMT2B-AS1 NA 0.047 90-100% NA NA CRC,PAAD NA NA boxplot AE000661.37 NA chr14 22380680 22482959 - 102280 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AE000661.37 NA 0.812 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot RP11-19D2.1 NA chr20 7256580 7258214 - 1635 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-19D2.1 NA 0.012 0-10% NA NA HCC NA NA boxplot RP11-339B21.10 NA chr9 128431598 128432006 + 409 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-339B21.10 NA 0.035 40-50% NA NA Breast_cancer,CRC,Normal NA NA boxplot RP11-138I1.2 NA chr17 16414524 16416689 - 2166 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-138I1.2 NA 0.082 80-90% NA NA Breast_cancer,CRC,Normal,PAAD NA NA boxplot RP11-330C7.3 NA chr1 92732000 92733257 + 1258 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-330C7.3 NA 0.035 30-40% Testis 4.906892038 HCC,Normal NA NA boxplot LINC01387 long intergenic non-protein coding RNA 1387 chr18 6511416 6590653 + 79238 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01387 NA 0.024 70-80% NA NA Normal,PAAD NA NA boxplot CRIP1P2 cysteine-rich protein 1 (intestinal) pseudogene 2 chr3 25686896 25687123 + 228 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CRIP1P2 NA 0.024 80-90% NA NA Normal NA NA boxplot AP000487.4 NA chr11 70358198 70358677 - 480 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AP000487.4 NA 0.035 40-50% NA NA CRC,PAAD NA NA boxplot CTD-2545G14.6 NA chr17 7242200 7243814 + 1615 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2545G14.6 NA 0.412 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RPL21P134 ribosomal protein L21 pseudogene 134 chrX 75384346 75384828 + 483 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL21P134 NA 0.565 80-90% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot AC063976.7 NA chr5 132199456 132203487 + 4032 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC063976.7 NA 0.024 80-90% NA NA Breast_cancer,HCC NA NA boxplot CCT6P3 chaperonin containing TCP1 subunit 6 pseudogene 3 chr7 65038354 65074713 + 36360 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CCT6P3 NA 0.918 0-10% NA NA CHD,CRC,HCC,Normal,PAAD CHD(down),CRC(up),PAAD(up) NA boxplot LINC01214 long intergenic non-protein coding RNA 1214 chr3 150265412 150287373 - 21962 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01214 exo_circ_003585,exo_circ_003586 0.012 40-50% NA NA Breast_cancer,HCC NA NA boxplot RP11-102F4.2 NA chr8 69713390 69719722 + 6333 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-102F4.2 NA 0.012 20-30% Testis 4.906892038 Normal NA NA boxplot RPS27P29 ribosomal protein S27 pseudogene 29 chr19 23597341 23597592 + 252 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPS27P29 NA 0.306 90-100% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP4-725G10.4 NA chr7 56175634 56176412 + 779 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-725G10.4 NA 0.024 20-30% NA NA HCC,Normal NA NA boxplot AF186192.1 NA chr8 144698614 144699185 - 572 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AF186192.1 NA 0.012 0-10% NA NA Breast_cancer,HCC NA NA boxplot AC079630.2 NA chr12 40156239 40167707 + 11469 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC079630.2 NA 0.035 10-20% NA NA Normal,PAAD NA NA boxplot RP13-514E23.2 NA chr4 86000327 86000766 - 440 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP13-514E23.2 NA 0.106 20-30% NA NA CRC,HCC,Normal NA NA boxplot VDAC2P1 voltage-dependent anion channel 2 pseudogene 1 chr21 16094415 16095372 - 958 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=VDAC2P1 NA 0.012 50-60% Testis 4.38941992 Normal NA NA boxplot RP4-612C19.2 NA chr1 93199755 93199939 - 185 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-612C19.2 NA 0.012 80-90% NA NA CRC NA NA boxplot KRT89P keratin 89 pseudogene chr12 52341197 52354036 + 12840 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KRT89P NA 0.012 60-70% NA NA Breast_cancer,PAAD NA NA boxplot DNM1P33 dynamin 1 pseudogene 33 chr15 74062780 74063785 + 1006 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DNM1P33 NA 0.024 80-90% NA NA Breast_cancer,CRC,HCC NA NA boxplot AC007326.10 NA chr22 18951934 18959512 - 7579 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC007326.10 NA 0.012 90-100% NA NA Breast_cancer NA NA boxplot RP11-445H22.3 NA chr20 44656451 44663498 - 7048 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-445H22.3 NA 0.376 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-108F13.2 NA chr1 229688999 229689904 - 906 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-108F13.2 NA 0.012 40-50% NA NA Breast_cancer,Normal NA NA boxplot RP11-220I1.2 NA chr9 37112548 37115490 - 2943 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-220I1.2 NA 0.024 70-80% Testis 3.730650769 Breast_cancer,HCC,PAAD NA NA boxplot LA16c-312E8.4 NA chr16 1437154 1439315 + 2162 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LA16c-312E8.4 NA 0.012 80-90% NA NA Breast_cancer,Normal NA NA boxplot AF131216.5 NA chr8 11345748 11347502 - 1755 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AF131216.5 NA 0.012 80-90% Pancreas 2.337455019 Breast_cancer NA NA boxplot RP4-742C19.13 NA chr22 39133090 39136760 + 3671 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-742C19.13 NA 0.435 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot RP11-424I19.2 NA chr15 101168530 101170821 + 2292 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-424I19.2 NA 0.059 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot SNAP47-AS1 SNAP47 antisense RNA 1 chr1 227743831 227747191 - 3361 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SNAP47-AS1 NA 0.012 90-100% Testis 2.002614982 Breast_cancer NA NA boxplot LINC00706 long intergenic non-protein coding RNA 706 chr10 6774307 6779180 - 4874 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00706 NA 0.012 0-10% NA NA Breast_cancer,PAAD NA NA boxplot DPRXP2 divergent-paired related homeobox pseudogene 2 chr6 35989515 35990436 - 922 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DPRXP2 NA 0.012 90-100% NA NA CRC NA NA boxplot CAPN10-AS1 CAPN10 antisense RNA 1 (head to head) chr2 240582700 240586699 - 4000 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CAPN10-AS1 NA 0.129 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-643G16.3 NA chr14 67610986 67613864 + 2879 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-643G16.3 NA 0.024 40-50% Testis 1.322166755 HCC,Normal NA NA boxplot RP11-226L15.5 NA chr1 160024953 160026794 - 1842 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-226L15.5 exo_circ_009461 0.188 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-1070N10.5 NA chr14 95620914 95643285 + 22372 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1070N10.5 NA 0.176 40-50% Testis 4.800694024 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot POU5F1P6 POU class 5 homeobox 1 pseudogene 6 chr3 128674735 128677005 - 2271 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=POU5F1P6 NA 0.024 80-90% NA NA Breast_cancer,CRC,HCC NA NA boxplot RP11-157J13.1 NA chr10 78176928 78178186 + 1259 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-157J13.1 NA 0.012 80-90% NA NA Breast_cancer NA NA boxplot RP11-1E1.2 NA chr4 77112495 77113458 - 964 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1E1.2 NA 0.035 90-100% Testis 3.408806289 Breast_cancer,CRC,HCC,Normal NA NA boxplot LINC00523 long intergenic non-protein coding RNA 523 chr14 100657250 100676069 + 18820 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00523 NA 0.012 0-10% Testis 3.729171865 Breast_cancer,Normal NA NA boxplot PINK1-AS PINK1 antisense RNA chr1 20642657 20652193 - 9537 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PINK1-AS NA 0.882 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot CTD-2509G16.2 NA chr14 65212893 65222347 - 9455 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2509G16.2 NA 0.412 10-20% NA NA CRC,HCC,Normal,PAAD CRC(up),PAAD(up) NA boxplot AC019349.5 NA chr17 41500983 41502409 + 1427 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC019349.5 NA 0.012 10-20% NA NA Breast_cancer,Normal,PAAD NA NA boxplot AP000275.64 NA chr21 32624416 32625096 - 681 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AP000275.64 NA 0.024 60-70% Testis 4.906892038 CRC,PAAD NA NA boxplot RPL24P4 ribosomal protein L24 pseudogene 4 chr6 42956345 42956765 - 421 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL24P4 NA 1 0-10% NA NA CHD,CRC,HCC,Normal,PAAD CRC(down) NA boxplot PHACTR2P1 phosphatase and actin regulator 2 pseudogene 1 chr10 119793589 119816642 - 23054 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PHACTR2P1 NA 0.012 10-20% NA NA NA NA NA boxplot PAX8-AS1 PAX8 antisense RNA 1 chr2 113211522 113276581 + 65060 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PAX8-AS1 NA 0.859 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down) NA boxplot KRT8P3 keratin 8 pseudogene 3 chr8 61578220 61579668 + 1449 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KRT8P3 NA 0.553 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD HCC(up),PAAD(up) NA boxplot RPL12P28 ribosomal protein L12 pseudogene 28 chr10 5861805 5862594 - 790 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL12P28 NA 0.282 50-60% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot KTN1-AS1 KTN1 antisense RNA 1 chr14 55499278 55580110 - 80833 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KTN1-AS1 NA 0.553 20-30% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot MAST4-AS1 MAST4 antisense RNA 1 chr5 67001383 67003953 - 2571 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MAST4-AS1 NA 0.812 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),HCC(down) NA boxplot CFAP58-AS1 CFAP58 antisense RNA 1 (head to head) chr10 104351591 104353575 - 1985 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CFAP58-AS1 NA 0.353 30-40% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-439K3.3 NA chr9 83276376 83279499 + 3124 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-439K3.3 NA 0.306 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-121A14.3 NA chr9 124262876 124265809 + 2934 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-121A14.3 NA 0.059 60-70% Testis 4.184908429 Breast_cancer,CRC,Normal NA NA boxplot SPTLC1P1 serine palmitoyltransferase, long chain base subunit 1 pseudogene 1 chr10 31360955 31361215 + 261 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SPTLC1P1 NA 0.212 70-80% NA NA CHD,HCC,Normal,PAAD NA NA boxplot LA16c-329F2.2 NA chr16 1707252 1707973 + 722 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LA16c-329F2.2 NA 0.165 50-60% NA NA CRC,HCC,Normal NA NA boxplot TNXA tenascin XA (pseudogene) chr6 32008614 32012472 - 3859 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TNXA NA 0.788 20-30% Adrenal Gland 2.388289844 Breast_cancer,CHD,CRC,HCC,Normal,PAAD CRC(up),HCC(up) NA boxplot DLGAP1-AS5 DLGAP1 antisense RNA 5 chr18 4264602 4295405 + 30804 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DLGAP1-AS5 NA 0.059 10-20% Salivary Gland 3.110267139 Breast_cancer,CRC,HCC,Normal NA NA boxplot RPSAP8 ribosomal protein SA pseudogene 8 chrX 100155885 100156773 - 889 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPSAP8 NA 0.459 80-90% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-457I16.4 NA chr16 18533418 18533817 + 400 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-457I16.4 NA 0.047 80-90% Testis 4.906892038 Breast_cancer,Normal NA NA boxplot UBE2NP1 ubiquitin conjugating enzyme E2N pseudogene 1 chr14 21611924 21612381 - 458 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=UBE2NP1 NA 0.012 90-100% NA NA Normal NA NA boxplot SLC26A4-AS1 SLC26A4 antisense RNA 1 chr7 107653968 107662151 - 8184 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SLC26A4-AS1 NA 0.082 50-60% Thyroid 4.296237367 Breast_cancer,CRC,HCC,Normal NA NA boxplot RP11-83C7.1 NA chr4 38366914 38385759 + 18846 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-83C7.1 NA 0.094 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot XXbac-BPG170G13.32 NA chr6 29751965 29752207 - 243 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=XXbac-BPG170G13.32 NA 0.012 0-10% NA NA Breast_cancer,Normal NA NA boxplot RP11-387H17.4 NA chr17 39927742 39939601 + 11860 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-387H17.4 NA 0.6 10-20% Testis 1.135082411 CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot LINC01250 long intergenic non-protein coding RNA 1250 chr2 2895048 3126026 - 230979 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01250 NA 0.012 80-90% NA NA Breast_cancer,HCC NA NA boxplot AC016723.4 NA chr2 167814774 167941144 - 126371 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC016723.4 exo_circ_038224,exo_circ_048539 0.035 70-80% Testis 2.899383807 HCC,PAAD NA NA boxplot AC006538.8 NA chr19 2700689 2701266 - 578 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC006538.8 NA 0.035 60-70% NA NA CRC NA NA boxplot HMGB3P27 high mobility group box 3 pseudogene 27 chr17 42648178 42648738 + 561 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HMGB3P27 NA 0.012 80-90% NA NA CRC NA NA boxplot RP11-783K16.13 NA chr11 64246939 64249494 - 2556 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-783K16.13 NA 0.329 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot GS1-115G20.1 NA chr1 184408337 184412360 + 4024 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GS1-115G20.1 NA 0.035 70-80% NA NA Breast_cancer,CRC,Normal NA NA boxplot AC068580.6 NA chr11 1760348 1762486 + 2139 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC068580.6 NA 0.459 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-485G7.6 NA chr16 11348143 11349321 - 1179 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-485G7.6 NA 0.012 30-40% NA NA Breast_cancer,HCC,PAAD NA NA boxplot AKR7A2P1 aldo-keto reductase family 7, member A2 pseudogene 1 chr1 112923423 112924337 + 915 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AKR7A2P1 NA 0.012 10-20% NA NA Breast_cancer,Normal NA NA boxplot RP11-513O13.1 NA chr8 48428143 48431041 - 2899 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-513O13.1 NA 0.012 40-50% NA NA Breast_cancer,CRC NA NA boxplot OTUD6B-AS1 OTUD6B antisense RNA 1 (head to head) chr8 91059909 91070189 - 10281 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=OTUD6B-AS1 NA 1 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-217B7.2 NA chr9 104927553 104928892 + 1340 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-217B7.2 NA 0.024 80-90% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot LINC01272 long intergenic non-protein coding RNA 1272 chr20 50267486 50279795 + 12310 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01272 NA 1 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot LA16c-380H5.5 NA chr16 3006120 3007388 + 1269 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LA16c-380H5.5 NA 0.082 60-70% NA NA CRC,Normal,PAAD NA NA boxplot RP11-348J24.2 NA chr5 92082597 92479426 + 396830 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-348J24.2 NA 0.024 60-70% NA NA PAAD NA NA boxplot RP3-391O22.3 NA chr6 34576258 34576656 - 399 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-391O22.3 exo_circ_016351 0.047 50-60% NA NA CRC,Normal NA NA boxplot AC104634.3 NA chr2 231559903 231560364 + 462 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC104634.3 NA 0.106 60-70% NA NA CRC,HCC,Normal NA NA boxplot RP4-730K3.3 NA chr1 113698884 113699631 - 748 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-730K3.3 NA 0.282 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot ACTG1P21 actin gamma 1 pseudogene 21 chr1 77773865 77774864 - 1000 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ACTG1P21 NA 0.012 20-30% NA NA Breast_cancer,Normal NA NA boxplot TBCAP1 tubulin folding cofactor A pseudogene 1 chrX 33041395 33041721 + 327 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TBCAP1 NA 0.353 90-100% Testis 3.879726643 CHD,HCC,Normal,PAAD NA NA boxplot RP11-350G24.2 NA chr12 101066734 101069232 + 2499 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-350G24.2 NA 0.024 70-80% NA NA HCC NA NA boxplot CTC-548K16.6 NA chr19 14458401 14459366 + 966 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-548K16.6 NA 0.176 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot BMS1P21 BMS1, ribosome biogenesis factor pseudogene 21 chr10 79906605 79907856 + 1252 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=BMS1P21 NA 0.047 80-90% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-61L19.3 NA chr18 9519449 9520199 + 751 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-61L19.3 NA 0.365 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot BTG1P1 B-cell translocation gene 1 pseudogene 1 chr12 9135084 9135591 + 508 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=BTG1P1 NA 0.259 20-30% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot LINC00891 long intergenic non-protein coding RNA 891 chrX 71697196 71706455 + 9260 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00891 NA 0.412 30-40% NA NA CHD,CRC,HCC,Normal,PAAD CHD(up) NA boxplot CTD-2036P10.6 NA chr15 42726583 42727211 + 629 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2036P10.6 NA 0.047 60-70% NA NA Breast_cancer,Normal,PAAD NA NA boxplot U47924.32 NA chr12 6899752 6900212 + 461 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=U47924.32 NA 0.071 80-90% NA NA CRC,Normal,PAAD NA NA boxplot RP11-575L7.4 NA chr9 83831586 83868532 + 36947 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-575L7.4 NA 0.047 50-60% Testis 1.655102441 Breast_cancer,HCC,Normal NA NA boxplot CTC-1337H24.3 NA chr11 67353629 67354348 + 720 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-1337H24.3 NA 0.071 60-70% NA NA Breast_cancer,CRC,PAAD NA NA boxplot CTC-529I10.2 NA chr17 16040472 16041273 + 802 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-529I10.2 NA 0.129 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-214O14.1 NA chr4 128069014 128069612 - 599 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-214O14.1 NA 0.012 90-100% Testis 4.906892038 Normal NA NA boxplot AC097721.1 NA chr2 138412066 138413318 - 1253 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC097721.1 NA 0.094 30-40% NA NA CRC,Normal,PAAD NA NA boxplot RP11-63G10.2 NA chr1 58838448 58851254 - 12807 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-63G10.2 NA 0.012 0-10% NA NA PAAD NA NA boxplot TBC1D27 TBC1 domain family member 27 chr17 16922915 16934839 - 11925 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TBC1D27 NA 0.224 20-30% Spleen 3.4201559 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CCND2-AS2 CCND2 antisense RNA 2 chr12 4252735 4275065 - 22331 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CCND2-AS2 NA 0.024 60-70% NA NA Breast_cancer,HCC,Normal NA NA boxplot MRPL3P1 mitochondrial ribosomal protein L3 pseudogene 1 chr13 19304593 19305625 - 1033 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MRPL3P1 NA 0.635 20-30% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot CTB-31N19.5 NA chr16 21526824 21531141 - 4318 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTB-31N19.5 NA 0.024 70-80% NA NA Breast_cancer,Normal,PAAD NA NA boxplot AP000568.2 NA chr21 19739709 19740150 + 442 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AP000568.2 NA 0.388 80-90% Testis 4.906892038 CRC,HCC,Normal,PAAD NA NA boxplot UBFD1P1 ubiquitin family domain containing 1 pseudogene 1 chr3 98434034 98434847 + 814 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=UBFD1P1 NA 0.012 10-20% NA NA PAAD NA NA boxplot CTA-398F10.2 NA chr8 8456909 8461337 - 4429 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTA-398F10.2 NA 0.012 70-80% NA NA HCC NA NA boxplot AC006195.2 NA chr7 33379964 33380886 + 923 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC006195.2 NA 0.118 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-81H3.2 NA chr12 74133166 74402535 - 269370 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-81H3.2 exo_circ_045527 0.212 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-390M11.1 NA chr15 54048588 54050876 - 2289 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-390M11.1 NA 0.012 30-40% Brain 4.906892038 Breast_cancer,Normal NA NA boxplot MUC20P1 mucin 20, cell surface associated pseudogene 1 chr3 195614947 195620233 + 5287 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MUC20P1 NA 0.329 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-432M8.4 NA chr5 17593798 17594394 - 597 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-432M8.4 NA 0.012 90-100% NA NA PAAD NA NA boxplot RP6-218J18.2 NA chrX 44029332 44030921 + 1590 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP6-218J18.2 NA 0.388 80-90% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot SLC25A38P1 solute carrier family 25, member 38 pseudogene 1 chr1 172748560 172749502 + 943 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SLC25A38P1 NA 0.282 70-80% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot RP11-174G6.5 NA chr12 14762504 14767931 - 5428 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-174G6.5 NA 0.306 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-135F9.3 NA chr12 100032325 100034074 - 1750 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-135F9.3 NA 0.741 10-20% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(up),HCC(up),PAAD(up) NA boxplot RP11-288I21.1 NA chr1 15720312 15736896 - 16585 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-288I21.1 NA 0.329 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot EEF1A1P6 eukaryotic translation elongation factor 1 alpha 1 pseudogene 6 chr7 22510616 22511999 - 1384 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=EEF1A1P6 NA 1 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up) NA boxplot GCNT1P3 glucosaminyl (N-acetyl) transferase 1, core 2 pseudogene 3 chr3 190624595 190625169 + 575 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GCNT1P3 NA 0.035 80-90% Liver 1.549418104 CRC,HCC NA NA boxplot RP11-467L19.8 NA chr15 20516252 20520627 + 4376 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-467L19.8 NA 0.141 40-50% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot RP11-192H23.8 NA chr17 28601827 28602284 - 458 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-192H23.8 NA 0.094 60-70% NA NA CRC,Normal NA NA boxplot AC116366.5 NA chr5 132419416 132426714 - 7299 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC116366.5 NA 0.706 0-10% Whole Blood 2.424425811 Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(up),HCC(up),PAAD(up) NA boxplot RP11-630I5.1 NA chr1 45781277 45781957 + 681 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-630I5.1 NA 0.012 80-90% NA NA Breast_cancer,HCC NA NA boxplot RP11-616M17.1 NA chr15 99337857 99338481 + 625 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-616M17.1 NA 0.141 20-30% NA NA CRC,HCC,PAAD NA NA boxplot RP11-121L10.2 NA chr11 90223153 90226538 + 3386 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-121L10.2 NA 0.141 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-834C11.7 NA chr12 54076838 54081903 - 5066 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-834C11.7 NA 0.365 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC000068.9 NA chr22 19454179 19454605 + 427 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC000068.9 NA 0.035 60-70% NA NA HCC,Normal NA NA boxplot CTC-308K20.1 NA chr5 172954786 172959392 - 4607 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-308K20.1 NA 0.035 10-20% NA NA CRC,Normal,PAAD NA NA boxplot OR13C1P olfactory receptor family 13 subfamily C member 1 pseudogene chr9 104656754 104657716 - 963 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=OR13C1P NA 0.024 10-20% Pituitary 4.906892038 Normal,PAAD NA NA boxplot RP11-613M5.1 NA chr12 76599671 76600470 + 800 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-613M5.1 NA 0.012 70-80% Testis 2.083992318 Breast_cancer NA NA boxplot CTB-152G17.6 NA chr7 105102838 105105483 - 2646 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTB-152G17.6 NA 0.271 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RPL39P38 ribosomal protein L39 pseudogene 38 chr19 18285343 18285495 - 153 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL39P38 NA 0.012 80-90% NA NA CHD,HCC,Normal,PAAD NA NA boxplot RP11-204L24.2 NA chr2 121530422 121532705 + 2284 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-204L24.2 NA 0.059 20-30% NA NA CRC,HCC,PAAD NA NA boxplot RPL5P1 ribosomal protein L5 pseudogene 1 chr15 24908932 24909825 - 894 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL5P1 NA 1 0-10% NA NA CHD,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down) NA boxplot RP11-392E22.10 NA chr9 38542389 38543215 - 827 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-392E22.10 NA 0.012 90-100% NA NA PAAD NA NA boxplot H3F3AP6 H3 histone, family 3A, pseudogene 6 chr4 139698144 139698554 - 411 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=H3F3AP6 exo_circ_054469,exo_circ_049227,exo_circ_054471 1 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up),CRC(up),HCC(up),PAAD(up) NA boxplot RP11-277B15.3 NA chr1 167219831 167220512 - 682 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-277B15.3 NA 0.024 60-70% NA NA Breast_cancer,CRC,Normal NA NA boxplot RP5-1065J22.8 NA chr1 109087971 109090858 - 2888 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-1065J22.8 NA 0.388 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC007228.9 NA chr19 56672574 56673901 - 1328 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC007228.9 NA 0.224 80-90% Ovary 1.389521932 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-727A23.4 NA chr11 83180144 83184520 + 4377 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-727A23.4 exo_circ_028348,exo_circ_050878 0.094 70-80% NA NA CRC,HCC,PAAD NA NA boxplot TNRC18P1 trinucleotide repeat containing 18 pseudogene 1 chr4 140641840 140645489 - 3650 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TNRC18P1 NA 0.376 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC008269.2 NA chr2 206866795 206868289 + 1495 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC008269.2 exo_circ_012569,exo_circ_001979 0.529 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-417N10.5 NA chr16 71777603 71777834 - 232 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-417N10.5 NA 0.047 60-70% NA NA Breast_cancer,CRC,Normal,PAAD NA NA boxplot RP11-234G16.4 NA chr10 129837505 129837794 + 290 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-234G16.4 NA 0.012 70-80% NA NA Normal NA NA boxplot RP11-982M15.7 NA chr14 104653548 104655787 - 2240 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-982M15.7 NA 0.094 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RPL12P12 ribosomal protein L12 pseudogene 12 chr20 19823443 19823943 - 501 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL12P12 NA 0.824 60-70% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-439A17.5 NA chr1 121142051 121142438 - 388 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-439A17.5 NA 0.047 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot SH3GL1P3 SH3-domain GRB2-like 1 pseudogene 3 chr17 68134675 68135604 - 930 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SH3GL1P3 NA 0.071 70-80% NA NA CRC,HCC,Normal NA NA boxplot RP11-211N8.3 NA chr9 62532397 62532853 - 457 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-211N8.3 NA 0.059 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CTC-523E23.4 NA chr19 34788582 34832869 - 44288 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-523E23.4 NA 0.635 10-20% Testis 1.807600012 Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot RP5-1070A16.1 NA chr1 98210747 98272658 + 61912 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-1070A16.1 NA 0.012 80-90% NA NA NA NA NA boxplot AC008694.2 NA chr5 157604707 157605637 - 931 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC008694.2 NA 0.012 20-30% NA NA HCC NA NA boxplot LL0XNC01-116E7.4 NA chrX 103928099 103929017 + 919 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LL0XNC01-116E7.4 NA 0.035 50-60% NA NA Breast_cancer,CRC,Normal NA NA boxplot RP11-1094M14.12 NA chr17 35553205 35554767 + 1563 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1094M14.12 NA 0.259 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot XXYLT1-AS1 XXYLT1 antisense RNA 1 chr3 195094588 195096057 + 1470 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=XXYLT1-AS1 NA 0.012 10-20% NA NA Breast_cancer,CHD NA NA boxplot FTLP3 ferritin, light polypeptide pseudogene 3 chr20 4023917 4024444 + 528 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FTLP3 NA 1 0-10% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-252K23.2 NA chr16 75379818 75381260 - 1443 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-252K23.2 NA 0.106 60-70% NA NA CRC,Normal,PAAD NA NA boxplot RP11-12A20.8 NA chr9 67797221 67797500 + 280 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-12A20.8 NA 0.012 90-100% NA NA Breast_cancer,PAAD NA NA boxplot RBMY2DP RNA binding motif protein, Y-linked, family 2, member D pseudogene chrY 26123674 26133308 + 9635 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RBMY2DP NA 0.012 90-100% NA NA NA NA NA boxplot LINC01480 long intergenic non-protein coding RNA 1480 chr19 41535183 41536904 + 1722 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01480 NA 0.729 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD HCC(up) NA boxplot KRT17P1 keratin 17 pseudogene 1 chr17 16840743 16845883 - 5141 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KRT17P1 NA 0.035 40-50% NA NA Breast_cancer,CRC,HCC NA NA boxplot RP13-942N8.1 NA chr12 123363868 123366113 + 2246 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP13-942N8.1 NA 0.553 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-99E15.2 NA chr14 76710658 76761388 - 50731 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-99E15.2 NA 0.106 80-90% Testis 1.000251497 CRC,HCC,Normal,PAAD NA NA boxplot MEG8 maternally expressed 8 (non-protein coding) chr14 100836269 100947194 + 110926 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MEG8 exo_circ_051280 0.271 20-30% Pituitary 1.794173962 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-64C12.6 NA chr18 12230411 12231573 - 1163 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-64C12.6 NA 0.012 90-100% Testis 4.034776935 Breast_cancer NA NA boxplot CNTNAP3P1 contactin associated protein-like 3 pseudogene 1 chr9 62924911 62934964 + 10054 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CNTNAP3P1 NA 0.012 90-100% NA NA CRC,HCC NA NA boxplot RP11-2C24.7 NA chr16 30821338 30821884 + 547 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-2C24.7 NA 0.035 20-30% NA NA HCC,Normal NA NA boxplot RP3-416J7.4 NA chr6 181466 205484 - 24019 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-416J7.4 NA 0.012 0-10% Testis 4.619665738 Normal NA NA boxplot RP11-739P1.2 NA chr4 183987678 183988750 + 1073 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-739P1.2 NA 0.024 60-70% NA NA CRC,Normal NA NA boxplot RP3-355L5.5 NA chr6 105273220 105273760 - 541 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-355L5.5 NA 0.059 50-60% NA NA CRC,HCC,Normal NA NA boxplot RP11-730G20.2 NA chr8 74603244 74604244 - 1001 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-730G20.2 NA 0.894 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-31L22.3 NA chr11 72643237 72659407 + 16171 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-31L22.3 NA 0.024 40-50% Testis 4.906892038 Breast_cancer,CRC,HCC NA NA boxplot RP1-93L7.4 NA chrX 85851575 85851682 - 108 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-93L7.4 NA 0.012 80-90% NA NA NA NA NA boxplot RP11-124D2.7 NA chr14 23293852 23295798 + 1947 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-124D2.7 NA 0.012 60-70% NA NA Normal NA NA boxplot RP11-407B7.1 NA chr3 194005259 194070970 - 65712 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-407B7.1 NA 0.035 20-30% Testis 2.255656318 Breast_cancer,CRC,HCC,Normal NA NA boxplot RP11-119B16.2 NA chr20 3888239 3888868 - 630 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-119B16.2 NA 0.153 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CTD-2267D19.1 NA chr17 40348049 40350539 - 2491 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2267D19.1 NA 0.235 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-5P18.1 NA chr1 15969632 15970194 + 563 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-5P18.1 NA 0.012 50-60% Small Intestine 4.506496422 NA NA NA boxplot CTD-3199J23.6 NA chr17 43144956 43145255 + 300 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-3199J23.6 NA 0.259 70-80% NA NA CRC,HCC,Normal,PAAD NA NA boxplot LINC01572 long intergenic non-protein coding RNA 1572 chr16 72283301 72665009 - 381709 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01572 exo_circ_028784,exo_circ_041775,exo_circ_011261,exo_circ_041313,exo_circ_040320,exo_circ_047877,exo_circ_057425 0.847 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-1275H24.1 NA chr7 5426277 5428927 - 2651 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1275H24.1 NA 0.329 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot GPR1-AS GPR1 antisense RNA chr2 206203376 206266243 + 62868 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GPR1-AS NA 0.365 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot PGAM1P5 phosphoglycerate mutase 1 pseudogene 5 chr12 95551582 95673999 + 122418 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PGAM1P5 NA 0.024 90-100% NA NA Breast_cancer,Normal NA NA boxplot TOLLIP-AS1 TOLLIP antisense RNA 1 (head to head) chr11 1309769 1310707 + 939 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TOLLIP-AS1 NA 0.576 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot MTND2P31 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 2 pseudogene 31 chr4 14505865 14506480 - 616 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MTND2P31 exo_circ_054488 0.024 30-40% NA NA HCC,PAAD NA NA boxplot AC007879.3 NA chr2 207235299 207237875 - 2577 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC007879.3 NA 0.294 50-60% Testis 3.439804664 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-339B21.8 NA chr9 128444587 128446628 + 2042 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-339B21.8 NA 0.024 40-50% NA NA Breast_cancer,PAAD NA NA boxplot RP11-393N21.2 NA chr1 67522347 67532612 + 10266 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-393N21.2 NA 0.035 90-100% NA NA Breast_cancer,HCC NA NA boxplot RP11-390P24.1 NA chr17 39566915 39567559 + 645 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-390P24.1 NA 0.553 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP5-971N18.3 NA chr20 8019223 8043512 + 24290 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-971N18.3 NA 0.047 70-80% Testis 4.223875905 CRC,Normal,PAAD NA NA boxplot RP11-1094H24.4 NA chr17 50050349 50055739 - 5391 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1094H24.4 NA 0.176 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-150O12.6 NA chr8 37516410 37517021 - 612 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-150O12.6 NA 0.176 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot KDELC1P1 KDEL motif containing 1 pseudogene 1 chr5 128109486 128110994 + 1509 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KDELC1P1 NA 0.024 10-20% NA NA CRC NA NA boxplot RPL37P23 ribosomal protein L37 pseudogene 23 chr19 52143043 52143336 + 294 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL37P23 NA 0.035 90-100% NA NA CRC,Normal NA NA boxplot RP11-481J2.1 NA chr16 58382989 58383798 - 810 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-481J2.1 NA 0.012 30-40% Testis 4.046590681 Breast_cancer,PAAD NA NA boxplot RP1-7G5.5 NA chr12 109859767 109860420 - 654 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-7G5.5 NA 0.035 50-60% NA NA CRC,PAAD NA NA boxplot AQP7P5 aquaporin 7 pseudogene 5 chr9 40481558 40497592 - 16035 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AQP7P5 NA 0.071 90-100% NA NA CRC,HCC,Normal,PAAD NA NA boxplot AC083900.1 NA chr2 207868582 207869915 - 1334 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC083900.1 NA 0.082 50-60% NA NA CRC,Normal NA NA boxplot RP11-286E11.1 NA chr4 107863479 107978799 - 115321 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-286E11.1 NA 0.141 60-70% Testis 2.522001845 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-434C1.4 NA chr12 11500499 11501022 + 524 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-434C1.4 NA 0.141 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP5-1065J22.2 NA chr1 108986963 108987245 - 283 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-1065J22.2 NA 0.024 90-100% NA NA CRC NA NA boxplot RP11-423H2.3 NA chr5 177950335 177963960 + 13626 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-423H2.3 NA 0.588 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP3-511B24.5 NA chr20 41196647 41196938 - 292 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-511B24.5 NA 0.024 10-20% NA NA Normal NA NA boxplot RP11-754N21.1 NA chr12 78352519 78483019 + 130501 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-754N21.1 NA 0.012 10-20% Testis 4.700267551 HCC NA NA boxplot CTD-3064M3.4 NA chr8 141389939 141392574 - 2636 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-3064M3.4 NA 0.024 50-60% NA NA Breast_cancer,PAAD NA NA boxplot RP13-516M14.8 NA chr17 82249067 82251844 + 2778 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP13-516M14.8 NA 0.447 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-671J11.5 NA chr14 34541044 34541714 + 671 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-671J11.5 NA 0.706 10-20% NA NA CRC,HCC,Normal,PAAD CRC(up),HCC(up),PAAD(up) NA boxplot RP11-486M3.2 NA chr6 154549517 154550242 + 726 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-486M3.2 NA 0.012 20-30% NA NA PAAD NA NA boxplot RP11-319G9.1 NA chr16 78890231 78892302 + 2072 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-319G9.1 NA 0.047 60-70% NA NA CRC,Normal NA NA boxplot RP11-66N11.8 NA chrX 153599340 153604353 + 5014 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-66N11.8 NA 0.294 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot LINC00444 long intergenic non-protein coding RNA 444 chr13 47905329 47907357 - 2029 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00444 exo_circ_022766 0.2 40-50% Testis 4.040823159 CRC,HCC,Normal,PAAD NA NA boxplot RP11-100N21.1 NA chr4 47706372 47706987 + 616 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-100N21.1 NA 0.412 90-100% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-807E13.2 NA chr18 13151637 13152689 - 1053 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-807E13.2 NA 0.012 60-70% Testis 4.310696149 NA NA NA boxplot CDC42-IT1 CDC42 intronic transcript 1 chr1 22059197 22064199 + 5003 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CDC42-IT1 NA 0.118 70-80% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP13-514E23.1 NA chr4 86012296 86013874 - 1579 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP13-514E23.1 NA 0.047 20-30% Brain 1.234835519 Breast_cancer,Normal,PAAD NA NA boxplot RHEBP1 Ras-homolog enriched in brain pseudogene 1 chr10 46634911 46635466 - 556 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RHEBP1 NA 0.953 0-10% NA NA CHD,CRC,HCC,Normal,PAAD CHD(up),CRC(up),HCC(up),PAAD(up) NA boxplot DDX43P1 DEAD-box helicase 43 pseudogene 1 chr5 115974513 115976275 - 1763 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DDX43P1 NA 0.012 0-10% NA NA PAAD NA NA boxplot RP11-925D8.3 NA chr15 58151033 58152513 + 1481 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-925D8.3 NA 0.059 50-60% Whole Blood 3.293894289 CRC,Normal,PAAD NA NA boxplot RP4-616B8.5 NA chr20 38955910 38956547 + 638 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-616B8.5 NA 0.024 50-60% NA NA CRC,HCC NA NA boxplot AC003075.4 NA chr7 17279834 17299357 - 19524 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC003075.4 NA 0.671 10-20% Testis 1.629874756 CRC,HCC,Normal,PAAD HCC(up) NA boxplot RP11-175P13.3 NA chr12 100173196 100199783 - 26588 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-175P13.3 exo_circ_050905 0.612 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-1023L17.1 NA chr5 34164698 34244796 - 80099 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1023L17.1 NA 0.882 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),HCC(down),PAAD(up) NA boxplot RP11-420L9.4 NA chr6 3831933 3855737 + 23805 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-420L9.4 NA 0.012 10-20% Testis 4.906892038 Breast_cancer,PAAD NA NA boxplot AC114730.7 NA chr2 241754793 241755740 - 948 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC114730.7 NA 0.047 70-80% NA NA HCC,PAAD NA NA boxplot KB-1615E4.3 NA chr8 100492528 100493713 + 1186 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KB-1615E4.3 NA 0.024 20-30% Kidney 4.236338039 CRC,HCC NA NA boxplot CTD-2575K13.6 NA chr19 41908519 41910097 - 1579 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2575K13.6 NA 0.2 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot TMEM198B transmembrane protein 198B (pseudogene) chr12 55829608 55836246 + 6639 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TMEM198B NA 0.929 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP5-1139I1.1 NA chrX 119291529 119335610 + 44082 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-1139I1.1 NA 0.012 90-100% Testis 4.625856558 Breast_cancer NA NA boxplot AC010969.1 NA chr2 10003158 10006030 - 2873 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC010969.1 NA 0.059 30-40% Testis 2.66091733 Breast_cancer,CRC,HCC,Normal NA NA boxplot RP5-1142A6.2 NA chr16 88731180 88741425 + 10246 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-1142A6.2 NA 0.153 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot BCLAF1P1 BCL2-associated transcription factor 1 pseudogene 1 chr5 110948029 110950780 - 2752 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=BCLAF1P1 NA 0.071 90-100% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot RP11-227G15.11 NA chr17 32410159 32410746 + 588 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-227G15.11 NA 0.082 40-50% NA NA CRC,HCC,Normal NA NA boxplot RP11-328P23.4 NA chr7 65269374 65306238 + 36865 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-328P23.4 NA 0.024 10-20% NA NA PAAD NA NA boxplot MSL3P1 male-specific lethal 3 homolog (Drosophila) pseudogene 1 chr2 233865437 233868444 - 3008 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MSL3P1 NA 0.753 10-20% Testis 1.798297765 Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up),PAAD(up) NA boxplot RP4-633O19__A.1 NA chr22 36388626 36396517 + 7892 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-633O19__A.1 NA 0.165 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP4-607I7.1 NA chr11 35132655 35138032 - 5378 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-607I7.1 NA 0.071 50-60% NA NA HCC,Normal NA NA boxplot LINC00635 long intergenic non-protein coding RNA 635 chr3 107840228 107882000 - 41773 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00635 exo_circ_015926 0.165 40-50% Testis 4.863925011 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP6-91H8.3 NA chr14 71141125 71143253 - 2129 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP6-91H8.3 NA 0.035 60-70% NA NA Breast_cancer,CRC,Normal NA NA boxplot AC002331.1 NA chr16 26584755 26594813 - 10059 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC002331.1 NA 0.071 30-40% NA NA CRC,HCC,Normal NA NA boxplot RP11-160A9.3 NA chr6 70693839 70694619 + 781 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-160A9.3 NA 0.059 60-70% NA NA CRC,PAAD NA NA boxplot RP11-768B22.2 NA chr4 152666368 152670107 + 3740 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-768B22.2 NA 0.071 60-70% NA NA CRC,HCC,Normal NA NA boxplot AP000697.6 NA chr21 36698773 36701564 - 2792 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AP000697.6 NA 0.024 80-90% NA NA Breast_cancer,HCC,PAAD NA NA boxplot RP11-163E9.2 NA chr7 102364162 102380633 + 16472 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-163E9.2 NA 0.835 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot AC003986.6 NA chr7 19112474 19114271 + 1798 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC003986.6 NA 0.012 50-60% Breast 1.293319038 CRC NA NA boxplot RP11-345J4.6 NA chr16 29449191 29449625 + 435 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-345J4.6 NA 0.918 0-10% Whole Blood 4.906892038 CRC,HCC,Normal,PAAD CRC(up),HCC(up),PAAD(up) NA boxplot RP5-854E16.2 NA chr20 31285317 31286835 - 1519 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-854E16.2 NA 0.082 80-90% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot RP13-444H2.1 NA chr13 52334295 52341896 + 7602 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP13-444H2.1 NA 0.012 10-20% Testis 4.906892038 Breast_cancer,HCC NA NA boxplot CLCP2 Charcot-Leyden crystal protein pseudogene 2 chr13 114306646 114307066 + 421 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CLCP2 NA 0.035 80-90% NA NA HCC,Normal NA NA boxplot RP11-1096G20.5 NA chr17 11953889 11977594 - 23706 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1096G20.5 NA 0.2 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-843B15.2 NA chr12 32104117 32107528 - 3412 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-843B15.2 NA 0.071 60-70% Nerve 4.906892038 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot EEF1DP1 eukaryotic translation elongation factor 1 delta pseudogene 1 chr19 14070342 14071237 + 896 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=EEF1DP1 NA 0.694 70-80% Skin 1.069565513 Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot CTD-2240J17.4 NA chr15 81403026 81403570 + 545 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2240J17.4 NA 0.012 90-100% NA NA HCC NA NA boxplot CFL1P1 cofilin 1 (non-muscle) pseudogene 1 chr10 87817928 87845612 + 27685 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CFL1P1 NA 0.259 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot PTOV1-AS1 PTOV1 antisense RNA 1 chr19 49838639 49851676 - 13038 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PTOV1-AS1 NA 0.447 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot RAMP2-AS1 RAMP2 antisense RNA 1 chr17 42753914 42761257 - 7344 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RAMP2-AS1 NA 0.635 20-30% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-328J14.1 NA chr16 72224565 72225144 - 580 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-328J14.1 exo_circ_047876 0.141 50-60% Testis 4.906892038 CRC,HCC,Normal,PAAD NA NA boxplot CTD-2008N3.1 NA chr5 4135682 4143648 + 7967 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2008N3.1 NA 0.012 30-40% Testis 4.906892038 Breast_cancer,PAAD NA NA boxplot RP11-316M1.3 NA chr1 150973123 150975534 + 2412 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-316M1.3 NA 0.294 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC015849.19 NA chr17 35816717 35830293 - 13577 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC015849.19 NA 0.035 50-60% NA NA HCC,Normal NA NA boxplot RPL29P14 ribosomal protein L29 pseudogene 14 chr5 149545383 149545810 - 428 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL29P14 NA 0.082 60-70% NA NA CRC,HCC,Normal NA NA boxplot OR52P1P olfactory receptor family 52 subfamily P member 1 pseudogene chr11 5726502 5727464 + 963 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=OR52P1P NA 0.059 20-30% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot RP5-842K16.1 NA chr7 141414383 141416390 - 2008 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-842K16.1 NA 0.012 90-100% Testis 4.135170551 NA NA NA boxplot ARHGAP26-AS1 ARHGAP26 antisense RNA 1 chr5 142859604 142868922 - 9319 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ARHGAP26-AS1 NA 0.024 70-80% Testis 4.757891427 Breast_cancer,PAAD NA NA boxplot RP11-1186N24.5 NA chr16 15104723 15131601 - 26879 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1186N24.5 NA 0.894 20-30% NA NA CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-1299A16.3 NA chr4 98658904 98664550 + 5647 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1299A16.3 NA 0.671 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),PAAD(down) NA boxplot RP11-371F15.3 NA chr4 138819954 139012646 - 192693 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-371F15.3 NA 0.059 70-80% NA NA Breast_cancer,CRC,Normal NA NA boxplot USP27X-AS1 USP27X antisense RNA 1 (head to head) chrX 49876724 49879241 - 2518 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=USP27X-AS1 NA 0.588 30-40% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot STEAP2-AS1 STEAP2 antisense RNA 1 chr7 89882353 90211635 - 329283 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=STEAP2-AS1 NA 0.024 70-80% Prostate 1.143160084 PAAD NA NA boxplot RPL31P53 ribosomal protein L31 pseudogene 53 chr13 57391171 57391518 - 348 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL31P53 NA 0.012 60-70% Testis 4.906892038 HCC NA NA boxplot RP11-362K14.7 NA chr3 169793495 169793966 + 472 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-362K14.7 NA 0.094 70-80% NA NA CRC,HCC,Normal,PAAD NA NA boxplot METTL8P1 methyltransferase like 8 pseudogene 1 chr12 15255213 15255823 - 611 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=METTL8P1 NA 0.059 50-60% NA NA HCC,Normal,PAAD NA NA boxplot RP11-351M16.4 NA chr10 28303300 28307658 + 4359 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-351M16.4 NA 0.082 10-20% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot RP11-398C13.6 NA chr10 14877688 14878686 - 999 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-398C13.6 NA 0.153 70-80% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CTD-2021A8.2 NA chr7 51386363 51387101 - 739 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2021A8.2 NA 0.012 90-100% Testis 4.459459984 Breast_cancer,HCC NA NA boxplot RP11-388N2.1 NA chr9 117462294 117466260 - 3967 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-388N2.1 NA 0.012 20-30% Prostate 4.606366966 HCC NA NA boxplot RP11-676J12.6 NA chr17 877902 880093 + 2192 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-676J12.6 NA 0.141 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot HMGN1P24 high mobility group nucleosome binding domain 1 pseudogene 24 chr13 95809310 95809607 - 298 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HMGN1P24 NA 0.047 30-40% NA NA Breast_cancer,CRC,PAAD NA NA boxplot RP1-317E23.7 NA chr1 25831913 25832134 - 222 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-317E23.7 NA 0.435 70-80% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-456O19.5 NA chr18 56061109 56063078 - 1970 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-456O19.5 NA 0.106 70-80% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-389G6.3 NA chr3 97759523 97761532 + 2010 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-389G6.3 NA 0.012 90-100% Brain 2.00367025 NA NA NA boxplot RP11-58O9.2 NA chr17 40473554 40475289 - 1736 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-58O9.2 NA 0.094 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC007743.1 NA chr2 56173534 56185770 - 12237 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC007743.1 NA 0.659 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot YWHAEP5 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon pseudogene 5 chr2 138288029 138288793 - 765 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=YWHAEP5 exo_circ_053510,exo_circ_043379,exo_circ_038191,exo_circ_038192,exo_circ_038193 0.012 30-40% NA NA Breast_cancer,Normal NA NA boxplot AC006262.5 NA chr19 46189166 46203083 - 13918 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC006262.5 NA 0.047 0-10% Skin 2.174204108 Breast_cancer,HCC,PAAD PAAD(up) NA boxplot RP3-470B24.5 NA chr6 167975924 167979776 - 3853 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-470B24.5 NA 0.106 40-50% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot RP11-332E4.1 NA chrX 137324972 137325049 - 78 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-332E4.1 NA 0.012 90-100% NA NA HCC,PAAD NA NA boxplot GAPDHP76 glyceraldehyde-3-phosphate dehydrogenase pseudogene 76 chr19 11585246 11587135 + 1890 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GAPDHP76 NA 0.047 80-90% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot RP11-80H8.4 NA chr3 143123362 143131893 + 8532 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-80H8.4 NA 0.224 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CTD-3220F14.3 NA chr19 37314868 37315620 - 753 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-3220F14.3 NA 0.012 30-40% NA NA HCC NA NA boxplot AC092839.4 NA chr2 54545368 54546677 - 1310 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC092839.4 NA 0.012 60-70% NA NA NA NA NA boxplot AC005329.7 NA chr19 1392170 1396467 - 4298 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC005329.7 NA 0.388 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP5-1092A11.5 NA chr1 3658938 3668772 - 9835 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-1092A11.5 NA 0.047 80-90% Pituitary 3.748050717 CRC,HCC,Normal,PAAD NA NA boxplot RP11-526F3.1 NA chr5 112228283 112257309 + 29027 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-526F3.1 NA 0.012 70-80% NA NA PAAD NA NA boxplot LINC00863 long intergenic non-protein coding RNA 863 chr10 87342736 87357882 + 15147 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00863 NA 0.871 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-344B5.4 NA chr9 129258354 129259846 + 1493 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-344B5.4 NA 0.012 90-100% NA NA Breast_cancer,Normal NA NA boxplot RP11-259K5.1 NA chr3 37216779 37217988 + 1210 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-259K5.1 NA 0.012 10-20% NA NA Breast_cancer,CRC NA NA boxplot POU5F1P3 POU class 5 homeobox 1 pseudogene 3 chr12 8133772 8134849 - 1078 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=POU5F1P3 NA 0.012 90-100% NA NA Breast_cancer,HCC NA NA boxplot RP4-758J24.6 NA chr1 54033126 54034880 - 1755 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-758J24.6 NA 0.082 60-70% NA NA Breast_cancer,CRC,Normal,PAAD NA NA boxplot FRG2FP FSHD region gene 2 family member F, pseudogene chr3 198110112 198111878 + 1767 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FRG2FP NA 0.035 90-100% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot ZRANB2-AS2 ZRANB2 antisense RNA 2 (head to head) chr1 71081324 71489976 + 408653 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ZRANB2-AS2 NA 0.224 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-549L6.3 NA chr10 110207850 110208591 - 742 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-549L6.3 NA 0.224 20-30% Testis 4.012316573 CRC,HCC,Normal,PAAD NA NA boxplot P4HA2-AS1 P4HA2 antisense RNA 1 chr5 132184876 132192808 + 7933 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=P4HA2-AS1 NA 0.024 90-100% Testis 4.833662599 HCC,PAAD NA NA boxplot RP11-69M1.8 NA chr12 8014093 8019007 - 4915 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-69M1.8 NA 0.059 80-90% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot RP11-52A20.2 NA chr1 167379108 167381000 + 1893 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-52A20.2 NA 0.118 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot AC016995.3 NA chr2 38406719 38515740 - 109022 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC016995.3 NA 0.059 40-50% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot NAV2-AS1 NAV2 antisense RNA 1 chr11 20119684 20120632 - 949 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NAV2-AS1 NA 0.024 90-100% NA NA HCC,Normal NA NA boxplot RASAL2-AS1 RASAL2 antisense RNA 1 chr1 178091508 178093984 - 2477 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RASAL2-AS1 NA 0.2 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot ANP32BP1 acidic nuclear phosphoprotein 32 family member B pseudogene 1 chr15 75321397 75322693 - 1297 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ANP32BP1 NA 0.624 80-90% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP4-669P10.16 NA chr22 42136433 42139927 - 3495 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-669P10.16 NA 0.059 80-90% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot RP11-333E1.1 NA chr17 5192084 5248069 + 55986 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-333E1.1 exo_circ_017233 0.682 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),HCC(down) NA boxplot RP11-312J18.5 NA chr1 160894980 160896076 + 1097 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-312J18.5 NA 0.929 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down),PAAD(up) NA boxplot RP11-656D10.5 NA chr1 40514461 40515057 - 597 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-656D10.5 NA 0.176 70-80% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RBAKDN RBAK downstream neighbor (non-protein coding) chr7 5072125 5073223 + 1099 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RBAKDN NA 0.035 90-100% Testis 4.581317593 CRC,Normal NA NA boxplot RP11-647K16.1 NA chr2 190454092 190454521 - 430 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-647K16.1 NA 0.529 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RAET1E-AS1 RAET1E antisense RNA 1 chr6 149884431 149919508 + 35078 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RAET1E-AS1 NA 0.165 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-47I22.2 NA chr14 61556313 61570653 - 14341 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-47I22.2 NA 0.129 30-40% Testis 1.090106774 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot GNRHR2P1 GNRHR2 pseudogene 1 chr14 60398934 60400013 - 1080 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GNRHR2P1 NA 0.082 90-100% Testis 4.383055441 Breast_cancer,Normal,PAAD NA NA boxplot RP11-222K16.2 NA chr3 27712910 27714005 + 1096 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-222K16.2 NA 0.882 0-10% Spleen 1.217916552 Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot ZNF587P1 zinc finger protein 587 pseudogene 1 chr3 31794470 31796175 + 1706 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ZNF587P1 NA 0.012 0-10% Testis 4.026052943 Breast_cancer,HCC NA NA boxplot AC091492.2 NA chr3 12328003 12328274 + 272 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC091492.2 NA 0.059 20-30% NA NA Breast_cancer,HCC,PAAD NA NA boxplot RP1-303A1.1 NA chr6 7938430 7939322 - 893 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-303A1.1 NA 0.012 80-90% NA NA Breast_cancer NA NA boxplot RP11-211G23.1 NA chr11 69414307 69416832 + 2526 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-211G23.1 NA 0.012 50-60% NA NA Breast_cancer NA NA boxplot RP6-24A23.8 NA chrX 108725886 108726948 - 1063 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP6-24A23.8 NA 0.047 0-10% NA NA CRC,HCC,PAAD NA NA boxplot RP11-876N24.3 NA chr16 10933903 10936280 + 2378 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-876N24.3 NA 0.812 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(up),PAAD(down) NA boxplot RPS15AP1 ribosomal protein S15a pseudogene 1 chr20 21166206 21166596 - 391 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPS15AP1 NA 1 0-10% NA NA CHD,CRC,HCC,Normal,PAAD CRC(down),HCC(down),PAAD(down) NA boxplot NRAV negative regulator of antiviral response (non-protein coding) chr12 120490328 120495940 - 5613 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NRAV NA 0.929 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up) Yes boxplot RP11-474G23.3 NA chr2 68252870 68253848 + 979 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-474G23.3 NA 0.094 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-40B20.1 NA chr2 238454908 238457520 + 2613 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-40B20.1 NA 0.012 90-100% NA NA CRC NA NA boxplot AC005776.1 NA chr19 15338948 15339237 + 290 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC005776.1 NA 0.012 90-100% NA NA NA NA NA boxplot AC079630.4 NA chr12 40186009 40224915 - 38907 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC079630.4 NA 0.6 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-408H1.3 NA chr3 172560888 172595607 - 34720 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-408H1.3 NA 0.2 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-116D17.3 NA chr12 115299588 115300708 - 1121 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-116D17.3 NA 0.012 0-10% Adrenal Gland 3.012153551 HCC,Normal NA NA boxplot CTBP2P4 C-terminal binding protein 2 pseudogene 4 chr5 98576341 98577260 + 920 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTBP2P4 NA 0.847 20-30% NA NA CHD,CRC,HCC,Normal,PAAD CRC(down),PAAD(down) NA boxplot RP11-471N19.1 NA chr12 61231159 61232937 - 1779 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-471N19.1 NA 0.012 0-10% Testis 4.906892038 PAAD NA NA boxplot RP11-362A9.3 NA chr3 152457759 152496813 - 39055 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-362A9.3 NA 0.188 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-136K14.2 NA chr6 150624677 150626086 + 1410 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-136K14.2 NA 0.024 60-70% NA NA Normal,PAAD NA NA boxplot RP11-181C21.4 NA chr1 77810861 77811781 - 921 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-181C21.4 NA 0.929 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-642D21.2 NA chr8 105662352 105685765 - 23414 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-642D21.2 NA 0.012 70-80% Ovary 2.112771906 NA NA NA boxplot MEG3 maternally expressed 3 (non-protein coding) chr14 100779410 100861031 + 81622 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MEG3 exo_circ_056896 0.376 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA Yes boxplot RP4-800M22.2 NA chr1 52162186 52163026 - 841 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-800M22.2 NA 0.012 40-50% Brain 4.906892038 NA NA NA boxplot GS1-466O4.5 NA chrX 26223903 26224658 + 756 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GS1-466O4.5 NA 0.012 80-90% NA NA Normal NA NA boxplot AC096574.5 NA chr2 237612977 237626525 + 13549 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC096574.5 NA 0.012 90-100% NA NA Breast_cancer,Normal NA NA boxplot FAHD2CP fumarylacetoacetate hydrolase domain containing 2C, pseudogene chr2 96010551 96023380 + 12830 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FAHD2CP NA 0.753 20-30% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-397E7.4 NA chr4 86913266 86914817 - 1552 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-397E7.4 NA 0.141 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-395N3.2 NA chr2 226800146 226811029 + 10884 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-395N3.2 NA 0.082 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot U51244.2 NA chr2 45674701 45675476 - 776 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=U51244.2 NA 0.012 30-40% Testis 4.846120064 Breast_cancer,Normal NA NA boxplot ABBA01000934.1 NA chr3 91374236 91513775 - 139540 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ABBA01000934.1 NA 0.259 80-90% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CTC-296K1.4 NA chr17 44794747 44797783 - 3037 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-296K1.4 NA 0.024 50-60% NA NA CRC,Normal NA NA boxplot TACC1P1 transforming, acidic coiled-coil containing protein 1 pseudogene 1 chr10 37523011 37544701 + 21691 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TACC1P1 exo_circ_028216 0.012 70-80% Testis 4.564682871 Breast_cancer,CRC NA NA boxplot AC092566.1 NA chr19 8676844 8677584 + 741 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC092566.1 NA 0.2 20-30% Testis 4.906892038 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot GHc-857G6.7 NA chrX 103596608 103598904 + 2297 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GHc-857G6.7 NA 0.035 60-70% NA NA Breast_cancer,CRC NA NA boxplot RPL5P35 ribosomal protein L5 pseudogene 35 chr22 49757627 49758980 - 1354 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL5P35 NA 0.012 90-100% NA NA Breast_cancer NA NA boxplot SDCBPP3 syndecan binding protein (syntenin) pseudogene 3 chrX 40890647 40891537 - 891 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SDCBPP3 NA 0.035 90-100% Whole Blood 4.906892038 CRC,HCC,Normal NA NA boxplot AF131215.3 NA chr8 11123381 11126064 - 2684 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AF131215.3 NA 0.212 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot GBP1P1 guanylate binding protein 1, interferon-inducible pseudogene 1 chr1 89407679 89426243 + 18565 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GBP1P1 NA 0.965 0-10% NA NA CHD,CRC,HCC,Normal,PAAD CHD(down),PAAD(up) NA boxplot RPSAP31 ribosomal protein SA pseudogene 31 chr3 183884924 183888449 + 3526 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPSAP31 NA 0.012 60-70% NA NA Breast_cancer,HCC NA NA boxplot RP11-227D13.1 NA chr15 48645951 48652016 + 6066 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-227D13.1 NA 0.047 50-60% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot MTCO1P11 MT-CO1 pseudogene 11 chr9 5096666 5098193 + 1528 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MTCO1P11 NA 0.153 20-30% NA NA CRC,Normal,PAAD NA NA boxplot OSBPL9P4 oxysterol binding protein like 9 pseudogene 4 chr12 66563967 66569194 - 5228 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=OSBPL9P4 NA 0.012 50-60% Testis 4.906892038 NA NA NA boxplot RP11-34F20.7 NA chr13 50125816 50128463 + 2648 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-34F20.7 NA 0.447 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot AF001548.5 NA chr16 15726674 15732993 + 6320 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AF001548.5 NA 0.871 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),PAAD(down) NA boxplot RP11-333E13.4 NA chr4 40042917 40057199 - 14283 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-333E13.4 NA 0.024 90-100% NA NA Breast_cancer,HCC,Normal NA NA boxplot NANOGP5 Nanog homeobox pseudogene 5 chr9 100175178 100176054 + 877 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NANOGP5 exo_circ_016555 0.129 10-20% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-78J21.7 NA chr13 52600042 52642542 + 42501 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-78J21.7 exo_circ_045617,exo_circ_019958 0.929 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot FAM212B-AS1 FAM212B antisense RNA 1 chr1 111739841 111747798 + 7958 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FAM212B-AS1 NA 0.941 0-10% NA NA CHD,CRC,HCC,Normal,PAAD CHD(down),PAAD(up) NA boxplot RP11-714L20.1 NA chr4 137545731 137603430 + 57700 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-714L20.1 NA 0.012 70-80% NA NA HCC NA NA boxplot AC005808.3 NA chr20 53608354 53634590 + 26237 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC005808.3 NA 0.035 90-100% Testis 4.906892038 HCC,Normal NA NA boxplot RP11-57K17.1 NA chr6 118452469 118454992 - 2524 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-57K17.1 exo_circ_004078 0.2 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RAC1P9 ras-related C3 botulinum toxin substrate 1 pseudogene 9 chr7 53779783 53780263 + 481 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RAC1P9 NA 0.012 60-70% NA NA Normal NA NA boxplot RALGAPA1P1 NA chr9 105520128 105526359 + 6232 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RALGAPA1P1 NA 0.929 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-227B21.2 NA chr12 117453012 117456986 + 3975 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-227B21.2 NA 0.012 50-60% Pituitary 3.253478309 Normal NA NA boxplot RP11-555K12.1 NA chr4 152551277 152552364 - 1088 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-555K12.1 exo_circ_033145,exo_circ_007594 0.035 80-90% NA NA HCC,Normal NA NA boxplot RP3-496C20.1 NA chr22 40043068 40044530 - 1463 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-496C20.1 NA 0.047 50-60% Testis 4.052020022 Breast_cancer,CRC,HCC NA NA boxplot RP4-775C13.1 NA chr20 6213699 6215381 + 1683 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-775C13.1 NA 0.835 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot PEBP1P3 phosphatidylethanolamine binding protein 1 pseudogene 3 chr1 198679139 198680033 - 895 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PEBP1P3 NA 0.024 80-90% NA NA CRC NA NA boxplot CTD-2553C6.1 NA chr19 9995997 9997163 + 1167 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2553C6.1 NA 0.012 50-60% NA NA Breast_cancer,HCC NA NA boxplot CTC-329D1.2 NA chr5 140370891 140401367 - 30477 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-329D1.2 NA 0.365 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP5-1063M23.3 NA chr12 3296202 3366122 - 69921 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-1063M23.3 NA 0.012 60-70% NA NA Breast_cancer NA NA boxplot RP11-48F14.1 NA chr3 186454982 186493661 - 38680 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-48F14.1 NA 0.012 60-70% Testis 4.840316772 Breast_cancer,Normal NA NA boxplot RP11-140K17.3 NA chr6 34696317 34697470 + 1154 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-140K17.3 NA 0.824 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP5-890E16.5 NA chr17 48066704 48067293 - 590 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-890E16.5 NA 0.235 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot DNM1P28 dynamin 1 pseudogene 28 chr15 30098826 30102093 - 3268 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DNM1P28 NA 0.024 90-100% Testis 4.906892038 Breast_cancer,HCC NA NA boxplot RP11-90H3.1 NA chr1 105891739 105893517 + 1779 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-90H3.1 NA 0.765 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RPL21P44 ribosomal protein L21 pseudogene 44 chr4 53986587 53987058 - 472 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL21P44 NA 0.082 50-60% NA NA CRC,Normal NA NA boxplot SNRPCP3 small nuclear ribonucleoprotein polypeptide C pseudogene 3 chr3 150719997 150720836 - 840 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SNRPCP3 NA 0.035 60-70% NA NA Normal NA NA boxplot LINC00649 long intergenic non-protein coding RNA 649 chr21 33915534 33977691 + 62158 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00649 NA 0.976 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-549B18.1 NA chr18 31685655 31686823 + 1169 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-549B18.1 NA 0.329 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CTD-2562J17.9 NA chr11 75264289 75265170 + 882 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2562J17.9 NA 0.635 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP4-539M6.21 NA chr22 30421206 30421536 - 331 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-539M6.21 NA 0.071 80-90% NA NA HCC,Normal,PAAD NA NA boxplot CTD-3193O13.12 NA chr19 7898804 7903542 - 4739 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-3193O13.12 NA 0.035 40-50% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot RP11-304L19.1 NA chr16 2091436 2095433 + 3998 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-304L19.1 NA 0.059 80-90% NA NA Breast_cancer,HCC,PAAD NA NA boxplot AC006026.13 NA chr7 23680195 23680786 - 592 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC006026.13 NA 0.118 40-50% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot RP11-461F11.3 NA chr15 97540597 97560702 - 20106 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-461F11.3 NA 0.024 70-80% Testis 1.906546897 CRC NA NA boxplot AKR1C8P aldo-keto reductase family 1, member C8, pseudogene chr10 5154143 5185187 - 31045 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AKR1C8P exo_circ_014592,exo_circ_050631 0.424 30-40% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot ZNF890P zinc finger protein 890, pseudogene chr7 5121239 5144546 - 23308 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ZNF890P NA 0.424 20-30% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-323F24.3 NA chr15 56887107 56888219 + 1113 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-323F24.3 exo_circ_011171 0.012 90-100% NA NA PAAD NA NA boxplot KIR3DP1 killer cell immunoglobulin-like receptor, three domains, pseudogene 1 chr19 54786355 54790318 + 3964 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KIR3DP1 NA 0.012 90-100% Whole Blood 4.906892038 Breast_cancer,CRC NA NA boxplot CTD-3234P18.6 NA chr19 36668102 36669404 + 1303 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-3234P18.6 exo_circ_023171 0.071 70-80% NA NA CRC,Normal,PAAD NA NA boxplot RP11-705C15.3 NA chr12 9658567 9662085 + 3519 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-705C15.3 NA 0.871 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),PAAD(down) NA boxplot RP13-20L14.6 NA chr17 82454273 82458521 - 4249 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP13-20L14.6 NA 0.247 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot SEPT7P9 septin 7 pseudogene 9 chr10 38383069 38402916 - 19848 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SEPT7P9 NA 0.106 80-90% Testis 3.216500231 HCC,Normal,PAAD NA NA boxplot RP11-396M11.1 NA chr4 66094142 66094526 + 385 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-396M11.1 NA 0.024 60-70% Testis 4.115158433 PAAD NA NA boxplot AC024162.2 NA chr3 6692319 6693088 + 770 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC024162.2 NA 0.024 40-50% Testis 4.906892038 PAAD NA NA boxplot RP11-643G16.4 NA chr14 67614929 67616626 + 1698 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-643G16.4 NA 0.012 70-80% Testis 2.776703367 Normal NA NA boxplot CBX1P2 chromobox 1 pseudogene 2 chrX 17099782 17100239 - 458 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CBX1P2 NA 0.012 90-100% NA NA HCC,Normal NA NA boxplot CTD-2210P15.3 NA chr5 43586367 43587543 - 1177 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2210P15.3 NA 0.271 70-80% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-420L9.5 NA chr6 3751111 3753871 + 2761 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-420L9.5 NA 0.788 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot GGNBP1 gametogenetin binding protein 1 (pseudogene) chr6 33540046 33589026 + 48981 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GGNBP1 NA 0.106 60-70% Testis 4.347365343 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP1-228H13.5 NA chr1 40464319 40466767 + 2449 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-228H13.5 NA 0.576 10-20% NA NA CRC,HCC,Normal,PAAD PAAD(up) NA boxplot RP11-49I11.1 NA chr18 36179996 36187448 - 7453 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-49I11.1 NA 0.071 40-50% NA NA CRC,HCC,Normal NA NA boxplot RP1-122K4.3 NA chrX 13980066 13988820 - 8755 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-122K4.3 NA 0.024 10-20% NA NA Normal NA NA boxplot RP11-130L8.2 NA chr2 20586248 20586686 - 439 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-130L8.2 NA 0.024 80-90% NA NA CRC,Normal NA NA boxplot RIMKLBP1 ribosomal modification protein rimK-like family member B pseudogene 1 chr21 36050214 36051377 + 1164 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RIMKLBP1 NA 0.035 70-80% NA NA HCC,PAAD NA NA boxplot RP5-884M6.1 NA chr7 106775011 106795564 + 20554 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-884M6.1 NA 0.141 10-20% Testis 3.95702225 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP13-444K19.1 NA chrX 53825887 53826309 + 423 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP13-444K19.1 NA 0.553 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CTB-133P21.1 NA chr7 106824883 106838476 + 13594 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTB-133P21.1 exo_circ_039109 0.271 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-160E2.11 NA chr17 19160789 19162274 + 1486 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-160E2.11 NA 0.141 60-70% Spleen 1.647884956 CRC,HCC,Normal,PAAD NA NA boxplot RP11-48B3.5 NA chr8 80484561 80485619 - 1059 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-48B3.5 NA 0.282 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot AC008850.3 NA chr5 96942299 96943184 + 886 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC008850.3 NA 0.047 70-80% NA NA Breast_cancer,CRC NA NA boxplot RP11-196H14.2 NA chr12 64038562 64097618 - 59057 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-196H14.2 NA 0.012 60-70% Testis 2.362548523 HCC,Normal NA NA boxplot RP11-18F14.4 NA chr16 80627551 80628379 - 829 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-18F14.4 NA 0.082 30-40% Prostate 3.028603326 CRC,HCC,PAAD NA NA boxplot RP11-432J24.3 NA chr10 132433733 132441484 - 7752 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-432J24.3 NA 0.082 70-80% Testis 1.611932598 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-239H6.2 NA chr6 20212087 20317739 + 105653 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-239H6.2 exo_circ_044447 0.153 50-60% Testis 4.251685469 CRC,HCC,Normal,PAAD NA NA boxplot RP11-165M1.2 NA chr16 12372812 12373899 + 1088 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-165M1.2 NA 0.047 70-80% Testis 4.805168635 CRC,Normal NA NA boxplot RP11-961A15.3 NA chr17 1684726 1685151 + 426 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-961A15.3 NA 0.341 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-496I2.2 NA chr14 19244962 19247673 + 2712 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-496I2.2 NA 0.012 50-60% NA NA PAAD NA NA boxplot CHCHD2P6 coiled-coil-helix-coiled-coil-helix domain containing 2 pseudogene 6 chr1 15604597 15605043 + 447 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CHCHD2P6 NA 0.165 90-100% NA NA CRC,HCC,Normal,PAAD NA NA boxplot AC067945.4 NA chr2 191021526 191032314 + 10789 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC067945.4 NA 0.071 80-90% Testis 3.280253784 CRC,HCC,Normal NA NA boxplot AP000580.1 NA chr11 77813319 77813676 - 358 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AP000580.1 NA 0.553 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot WBP1LP2 WW domain binding protein 1-like pseudogene 2 chr7 107628553 107629550 + 998 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=WBP1LP2 NA 0.412 50-60% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot CTD-2027G2.1 NA chr15 96551381 96551517 + 137 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2027G2.1 NA 0.012 0-10% NA NA Normal NA NA boxplot RP1-225E12.3 NA chr6 139159157 139277181 - 118025 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-225E12.3 NA 0.788 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down) NA boxplot RPL9P5 ribosomal protein L9 pseudogene 5 chr14 58564146 58564616 + 471 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL9P5 NA 0.047 10-20% Pituitary 2.902120189 HCC,Normal NA NA boxplot RP11-455O6.2 NA chr17 81197393 81200288 + 2896 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-455O6.2 NA 0.118 60-70% NA NA CRC,HCC,Normal NA NA boxplot RP11-624J12.1 NA chr14 56514331 56551309 + 36979 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-624J12.1 NA 0.176 70-80% Testis 4.197175402 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-566K11.4 NA chr16 89919827 89922662 - 2836 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-566K11.4 NA 0.094 20-30% Testis 4.906892038 Breast_cancer,CRC,Normal,PAAD NA NA boxplot WASH4P WAS protein family homolog 4 pseudogene chr16 14381 18068 - 3688 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=WASH4P NA 0.824 20-30% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up) NA boxplot RP11-767C1.2 NA chr3 12832219 12832728 - 510 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-767C1.2 NA 0.082 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CTD-2154B17.4 NA chr5 10761065 10770294 + 9230 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2154B17.4 NA 0.435 30-40% Testis 3.158321996 CRC,HCC,Normal,PAAD NA NA boxplot BCRP3 breakpoint cluster region pseudogene 3 chr22 24632915 24653356 + 20442 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=BCRP3 NA 0.306 80-90% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-439C15.4 NA chr8 1972570 1974637 - 2068 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-439C15.4 NA 0.012 50-60% NA NA Breast_cancer,CRC NA NA boxplot BTNL10 butyrophilin like 10 chr1 228508655 228512305 - 3651 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=BTNL10 NA 0.859 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up),PAAD(down) NA boxplot EIF4BP2 eukaryotic translation initiation factor 4B pseudogene 2 chr10 21028999 21030792 + 1794 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=EIF4BP2 NA 0.894 70-80% Testis 3.024234948 Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot AC007563.5 NA chr2 216694464 216994079 + 299616 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC007563.5 exo_circ_038269 0.435 0-10% Testis 2.083998625 Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot RP11-552M6.1 NA chr13 73800074 73802203 + 2130 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-552M6.1 NA 0.024 40-50% NA NA CRC,PAAD NA NA boxplot RP11-142A23.1 NA chr8 72196334 72202269 + 5936 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-142A23.1 NA 0.012 90-100% NA NA Breast_cancer,Normal NA NA boxplot FAM27B family with sequence similarity 27 member B chr9 67725690 67725902 - 213 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FAM27B NA 0.224 50-60% NA NA CRC,HCC,Normal,PAAD NA Yes boxplot RP13-463N16.6 NA chr10 5594991 5596118 - 1128 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP13-463N16.6 NA 0.024 90-100% NA NA PAAD NA NA boxplot RP11-336A10.5 NA chr10 5608475 5610793 - 2319 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-336A10.5 NA 0.024 50-60% Small Intestine 1.994687993 Breast_cancer,PAAD NA NA boxplot RP11-476D10.1 NA chr12 40140926 40142876 - 1951 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-476D10.1 NA 0.2 40-50% Lung 3.265063837 CRC,HCC,Normal,PAAD NA NA boxplot LINC01427 long intergenic non-protein coding RNA 1427 chr20 22263065 22284029 - 20965 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01427 NA 0.012 30-40% NA NA Breast_cancer,PAAD NA NA boxplot KRT8P26 keratin 8 pseudogene 26 chr11 65726939 65728214 + 1276 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KRT8P26 NA 0.012 40-50% NA NA Breast_cancer NA NA boxplot RP11-571M6.7 NA chr12 57694132 57721510 - 27379 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-571M6.7 NA 0.447 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP3-323N1.2 NA chr10 11168922 11171376 - 2455 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-323N1.2 NA 0.318 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-423H2.5 NA chr5 177857945 177871194 - 13250 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-423H2.5 NA 0.012 90-100% Testis 4.906892038 CRC NA NA boxplot RP11-953B20.2 NA chr8 141968091 141968841 - 751 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-953B20.2 NA 0.012 0-10% Testis 4.906892038 Normal NA NA boxplot RP11-480I12.9 NA chr1 202861754 202875241 + 13488 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-480I12.9 NA 0.153 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP13-631K18.2 NA chr11 12030875 12061785 + 30911 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP13-631K18.2 NA 0.012 10-20% NA NA Breast_cancer,HCC NA NA boxplot AIMP1P1 aminoacyl tRNA synthetase complex-interacting multifunctional protein 1 pseudogene 1 chr20 14127400 14128336 + 937 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AIMP1P1 NA 0.024 80-90% Testis 4.005713072 Normal NA NA boxplot GGTA1P glycoprotein, alpha-galactosyltransferase 1 pseudogene chr9 121444991 121500027 - 55037 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GGTA1P exo_circ_055811,exo_circ_022349 1 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-293D9.2 NA chr8 30983459 30984321 - 863 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-293D9.2 NA 0.012 90-100% NA NA NA NA NA boxplot LL22NC03-24A12.9 NA chr22 22785643 22787268 - 1626 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LL22NC03-24A12.9 NA 0.035 20-30% NA NA Normal,PAAD NA NA boxplot YBX1P1 Y-box binding protein 1 pseudogene 1 chr14 66012830 66013789 - 960 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=YBX1P1 NA 1 0-10% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot ZMYM4-AS1 ZMYM4 antisense RNA 1 chr1 35358822 35366077 - 7256 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ZMYM4-AS1 NA 0.271 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot DEFT1P2 defensin, theta 1 pseudogene 2 chr8 7006293 7007389 - 1097 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DEFT1P2 NA 0.047 60-70% NA NA CHD,CRC,HCC NA NA boxplot FXNP2 frataxin pseuodgene 2 chr9 124968294 124968840 - 547 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FXNP2 NA 0.024 40-50% NA NA Breast_cancer,CRC NA NA boxplot ACTG1P4 actin gamma 1 pseudogene 4 chr1 103569553 103570674 + 1122 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ACTG1P4 NA 0.082 70-80% NA NA CRC,Normal NA NA boxplot RP11-24J19.1 NA chr15 92162798 92172436 - 9639 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-24J19.1 NA 0.071 80-90% NA NA CRC,Normal,PAAD NA NA boxplot RP3-399L15.3 NA chr6 113969701 114471705 + 502005 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-399L15.3 exo_circ_049687 0.435 30-40% Testis 1.47374763 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-1379J22.2 NA chr5 179595904 179603741 - 7838 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1379J22.2 NA 0.435 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CTD-3193K9.4 NA chr17 42679963 42682020 + 2058 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-3193K9.4 NA 0.071 70-80% NA NA Breast_cancer,CRC,Normal,PAAD NA NA boxplot RP11-982M15.2 NA chr14 104769349 104770271 + 923 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-982M15.2 NA 0.718 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot NBEAP1 neurobeachin pseudogene 1 chr15 20657638 20688408 - 30771 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NBEAP1 NA 0.435 20-30% Testis 1.885365718 Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot U73166.2 NA chr3 50260303 50263358 + 3056 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=U73166.2 NA 0.153 60-70% Testis 1.290809009 CRC,Normal,PAAD NA NA boxplot AC097467.2 NA chr4 155173716 155381694 + 207979 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC097467.2 NA 0.012 80-90% Testis 4.321611539 Breast_cancer,HCC NA NA boxplot RPL21P11 ribosomal protein L21 pseudogene 11 chr14 90366697 90367179 - 483 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL21P11 NA 0.376 80-90% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot RPL5P30 ribosomal protein L5 pseudogene 30 chr11 118560690 118561580 + 891 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL5P30 NA 0.012 30-40% NA NA Breast_cancer NA NA boxplot AP000345.1 NA chr22 23462086 23486980 - 24895 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AP000345.1 NA 0.035 70-80% Testis 4.110665919 Breast_cancer,Normal NA NA boxplot CTD-2515O10.5 NA chr16 30064306 30064825 - 520 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2515O10.5 NA 0.2 70-80% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot Z97634.3 NA chr16 382097 392960 + 10864 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=Z97634.3 NA 0.318 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-38J22.1 NA chr1 206175060 206177246 - 2187 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-38J22.1 NA 0.012 60-70% NA NA PAAD NA NA boxplot RP11-209D20.2 NA chr4 128944628 128944956 + 329 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-209D20.2 NA 0.024 30-40% NA NA HCC,Normal NA NA boxplot AC004901.1 NA chr7 46890625 47049678 - 159054 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC004901.1 NA 0.012 80-90% Kidney 4.906892038 Normal NA NA boxplot RP11-77K12.5 NA chr16 75499788 75516280 - 16493 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-77K12.5 NA 0.106 70-80% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot RP4-669L17.2 NA chr1 358857 366052 + 7196 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-669L17.2 NA 0.012 60-70% NA NA CRC NA NA boxplot CD99P1 CD99 molecule pseudogene 1 chrY 2609348 2657229 + 47882 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CD99P1 NA 0.929 0-10% NA NA CHD,CRC,HCC,Normal,PAAD CHD(up),CRC(up),HCC(up),PAAD(up) NA boxplot AC073063.10 NA chr7 99442890 99443496 - 607 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC073063.10 NA 0.765 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-163M18.1 NA chr14 44507407 44538513 + 31107 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-163M18.1 NA 0.012 10-20% Testis 4.906892038 CRC NA NA boxplot LINC00351 long intergenic non-protein coding RNA 351 chr13 85363601 85544570 + 180970 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00351 NA 0.024 80-90% Testis 4.906892038 PAAD NA NA boxplot RP11-346C20.3 NA chr16 73060470 73062316 + 1847 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-346C20.3 NA 0.035 40-50% NA NA HCC,Normal,PAAD NA NA boxplot PRYP3 PTPN13-like, Y-linked pseudogene 3 chrY 23681440 23694579 - 13140 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PRYP3 NA 0.012 90-100% NA NA CRC NA NA boxplot RP11-195L15.2 NA chr13 49792886 49793307 + 422 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-195L15.2 NA 0.024 80-90% NA NA Normal NA NA boxplot RP11-262A12.1 NA chr11 109751442 109823847 - 72406 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-262A12.1 exo_circ_045221 0.471 30-40% Testis 4.906892038 CRC,HCC,Normal,PAAD NA NA boxplot RP11-511H9.3 NA chr12 101773114 101773755 - 642 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-511H9.3 NA 0.094 60-70% NA NA Breast_cancer,CRC,Normal NA NA boxplot RP11-863P13.1 NA chr16 88177289 88178646 + 1358 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-863P13.1 NA 0.012 90-100% NA NA Breast_cancer,Normal NA NA boxplot LINC00324 long intergenic non-protein coding RNA 324 chr17 8220642 8224043 - 3402 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00324 NA 0.965 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down) NA boxplot ASH1L-AS1 ASH1L antisense RNA 1 chr1 155562042 155563944 + 1903 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ASH1L-AS1 NA 0.541 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-213G21.2 NA chr4 38564003 38570671 + 6669 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-213G21.2 NA 0.024 70-80% Testis 4.031671694 CRC,HCC,Normal,PAAD NA NA boxplot CTB-139P11.2 NA chr7 75625089 75626970 - 1882 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTB-139P11.2 NA 0.047 60-70% NA NA Breast_cancer,CRC NA NA boxplot CTA-373H7.7 NA chr22 26667693 26672654 - 4962 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTA-373H7.7 NA 0.082 40-50% Pituitary 2.247425408 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot PCBP2P1 poly(rC) binding protein 2 pseudogene 1 chr21 39171130 39172106 - 977 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PCBP2P1 NA 0.035 60-70% NA NA CRC,Normal NA NA boxplot AP001469.5 NA chr21 46220269 46225364 + 5096 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AP001469.5 NA 0.047 80-90% NA NA Breast_cancer,CRC,HCC,PAAD NA NA boxplot RP11-326K13.4 NA chr18 31942575 31944156 + 1582 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-326K13.4 NA 0.647 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot RP11-1042B17.2 NA chr14 60602146 60602533 - 388 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1042B17.2 NA 0.012 90-100% Pituitary 3.638669965 NA NA NA boxplot RP1-46F2.3 NA chr12 110951683 110957812 - 6130 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-46F2.3 NA 0.012 90-100% Testis 3.6119539 NA NA NA boxplot RP11-179K3.2 NA chr10 64901136 64924518 - 23383 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-179K3.2 NA 0.012 80-90% Testis 3.14792624 PAAD NA NA boxplot AC055876.1 NA chr15 28789199 28789486 + 288 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC055876.1 NA 0.012 90-100% NA NA HCC NA NA boxplot MIR3142HG MIR3142 host gene chr5 160468268 160487426 + 19159 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MIR3142HG NA 0.741 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),HCC(down),PAAD(down) NA boxplot RP11-10O17.1 NA chr15 74478070 74490286 - 12217 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-10O17.1 NA 0.247 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot NFYAP1 nuclear transcription factor Y subunit alpha pseudogene 1 chr13 63975451 63976422 - 972 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NFYAP1 NA 0.047 20-30% Testis 4.906892038 Breast_cancer,CRC,Normal,PAAD NA NA boxplot CH17-335B8.4 NA chr10 46370759 46382626 + 11868 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CH17-335B8.4 NA 0.094 60-70% NA NA HCC,Normal,PAAD NA NA boxplot RP11-372E1.4 NA chr3 142926675 142942534 + 15860 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-372E1.4 NA 0.035 40-50% Liver 4.845614983 Breast_cancer,HCC NA NA boxplot TCF4-AS2 TCF4 antisense RNA 2 chr18 55492175 55496392 + 4218 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TCF4-AS2 NA 0.024 60-70% NA NA HCC NA NA boxplot GAPDHP33 glyceraldehyde 3 phosphate dehydrogenase pseudogene 33 chr1 119596167 119597179 - 1013 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GAPDHP33 NA 0.035 40-50% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot RP11-820I16.3 NA chr18 11993988 11994938 - 951 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-820I16.3 NA 0.012 70-80% NA NA NA NA NA boxplot TMEM9B-AS1 TMEM9B antisense RNA 1 chr11 8964675 8977527 + 12853 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TMEM9B-AS1 exo_circ_002826 0.365 30-40% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot CTC-276P9.2 NA chr5 135120526 135139681 + 19156 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-276P9.2 NA 0.012 10-20% Testis 4.906892038 Breast_cancer,PAAD NA NA boxplot RP11-16C1.1 NA chr17 75394123 75394963 + 841 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-16C1.1 NA 0.012 30-40% NA NA HCC NA NA boxplot RP11-412B14.1 NA chr8 42705583 42721946 - 16364 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-412B14.1 NA 0.035 20-30% Testis 4.832299004 Breast_cancer,HCC,Normal NA NA boxplot RP11-49O14.3 NA chr9 94824272 94824773 + 502 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-49O14.3 NA 0.047 60-70% Testis 4.906892038 CRC,HCC,PAAD NA NA boxplot RP11-785H5.2 NA chr12 11166090 11171353 - 5264 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-785H5.2 NA 0.2 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot DNM1P46 dynamin 1 pseudogene 46 chr15 99790156 99806927 - 16772 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DNM1P46 NA 0.506 30-40% Testis 2.581953435 Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-446H18.1 NA chr3 107327830 107329197 - 1368 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-446H18.1 NA 0.024 0-10% NA NA Breast_cancer,Normal NA NA boxplot RP11-7O11.3 NA chr1 43944370 43946551 - 2182 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-7O11.3 NA 0.035 90-100% NA NA Breast_cancer,Normal NA NA boxplot RP11-54F2.1 NA chr5 10652211 10655925 - 3715 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-54F2.1 NA 0.235 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot GS1-259H13.2 transmembrane protein 225-like chr7 99598066 99610813 + 12748 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GS1-259H13.2 exo_circ_044689,exo_circ_015192 0.459 20-30% Testis 3.119879653 Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot DOC2GP double C2-like domains, gamma, pseudogene chr11 67612653 67616257 - 3605 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DOC2GP NA 0.224 40-50% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot RP11-416N4.4 NA chr20 10173520 10196990 + 23471 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-416N4.4 NA 0.035 50-60% Pituitary 3.805111748 Breast_cancer,CRC,HCC,PAAD NA NA boxplot RP11-16D22.2 NA chr13 34348043 34614170 + 266128 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-16D22.2 NA 0.012 80-90% NA NA PAAD NA NA boxplot RP11-854K16.4 NA chr15 21148334 21152970 + 4637 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-854K16.4 NA 0.012 70-80% NA NA Breast_cancer,CRC NA NA boxplot RP11-489E7.4 NA chr8 30082758 30083467 + 710 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-489E7.4 NA 0.341 30-40% NA NA CRC,HCC,Normal NA NA boxplot RP11-390F4.3 NA chr9 6716495 6727438 + 10944 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-390F4.3 NA 0.059 30-40% Testis 2.813828785 Breast_cancer,CRC,Normal,PAAD NA NA boxplot RP11-447D11.3 NA chr3 47346950 47349073 + 2124 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-447D11.3 NA 0.729 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-176D17.3 NA chr1 214344172 214357615 - 13444 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-176D17.3 NA 0.129 50-60% NA NA HCC,Normal,PAAD NA NA boxplot RP11-72L22.1 NA chr5 86967321 87137712 + 170392 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-72L22.1 NA 0.035 50-60% Testis 4.579348265 Breast_cancer,CRC,Normal,PAAD NA NA boxplot RP6-74O6.6 NA chr1 148358245 148358686 - 442 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP6-74O6.6 NA 0.024 50-60% NA NA HCC,Normal NA NA boxplot FAM215B family with sequence similarity 215 member B (non-protein coding) chr17 46558830 46562795 - 3966 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FAM215B NA 0.106 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CTC-260E6.9 NA chr19 20131894 20151908 - 20015 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-260E6.9 NA 0.012 90-100% NA NA Breast_cancer,CRC NA NA boxplot RP11-649G15.2 NA chr8 106520474 106657548 - 137075 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-649G15.2 NA 0.247 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RBMXP2 RNA binding motif protein, X-linked pseudogene 2 chr9 30689105 30690272 + 1168 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RBMXP2 NA 0.906 50-60% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-527F13.1 NA chr6 126177193 126202239 + 25047 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-527F13.1 exo_circ_038967,exo_circ_027803,exo_circ_010249,exo_circ_044386 0.153 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot AC005592.3 NA chr5 142703782 142705421 + 1640 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC005592.3 NA 0.024 40-50% NA NA HCC NA NA boxplot HNRNPUP1 heterogeneous nuclear ribonucleoprotein U pseudogene 1 chr14 43300263 43300595 + 333 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HNRNPUP1 NA 0.259 90-100% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot AC007365.3 NA chr2 64644612 64646698 + 2087 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC007365.3 NA 0.706 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down) NA boxplot AC010492.2 NA chr19 54229036 54230213 + 1178 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC010492.2 NA 0.129 30-40% NA NA CRC,Normal,PAAD NA NA boxplot FAM96AP2 family with sequence similarity 96, member A pseudogene 2 chr1 228114997 228115473 - 477 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FAM96AP2 NA 0.024 80-90% NA NA CRC,HCC NA NA boxplot RP11-195B21.3 NA chr9 67901099 67920634 + 19536 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-195B21.3 NA 0.212 60-70% NA NA HCC,Normal,PAAD NA NA boxplot AC009245.3 NA chr7 137721985 137722846 + 862 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC009245.3 NA 0.929 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down) NA boxplot CTC-296K1.3 NA chr17 44793199 44794474 + 1276 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-296K1.3 NA 0.012 20-30% NA NA HCC,Normal NA NA boxplot RP11-739B23.1 NA chr11 77473371 77477030 + 3660 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-739B23.1 NA 0.035 30-40% NA NA Breast_cancer,Normal NA NA boxplot AC104389.16 NA chr11 5205041 5207308 + 2268 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC104389.16 NA 0.659 10-20% NA NA CRC,HCC,Normal,PAAD HCC(up) NA boxplot GS1-54N10.1 NA chrX 142372276 142373990 + 1715 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GS1-54N10.1 NA 0.012 90-100% NA NA NA NA NA boxplot RP11-298J23.9 NA chr6 41791410 41791477 + 68 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-298J23.9 NA 0.094 70-80% NA NA CRC,HCC,Normal NA NA boxplot RP11-473M20.9 NA chr16 3076911 3087100 - 10190 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-473M20.9 NA 0.706 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),HCC(down),PAAD(down) NA boxplot ULK4P1 ULK4 pseudogene 1 chr15 32406597 32434992 - 28396 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ULK4P1 NA 0.224 50-60% Testis 2.46956736 CHD,CRC,HCC,Normal,PAAD NA NA boxplot AC104654.1 NA chr2 41877074 41894046 + 16973 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC104654.1 NA 0.012 10-20% Testis 4.522117181 Breast_cancer,HCC NA NA boxplot CASP12 caspase 12 (gene/pseudogene) chr11 104885718 104898670 - 12953 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CASP12 NA 0.082 50-60% NA NA CHD,CRC,HCC NA NA boxplot RP3-395M20.9 NA chr1 2581560 2584533 + 2974 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-395M20.9 NA 0.471 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CYP4F30P cytochrome P450 family 4 subfamily F member 30, pseudogene chr2 130680050 130685863 + 5814 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CYP4F30P NA 0.012 70-80% Testis 3.622965244 Breast_cancer,PAAD NA NA boxplot RPL5P7 ribosomal protein L5 pseudogene 7 chr2 173871653 173872465 - 813 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL5P7 NA 0.024 60-70% NA NA Normal NA NA boxplot DAPK1-IT1 DAPK1 intronic transcript 1 chr9 87553454 87554459 + 1006 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DAPK1-IT1 NA 0.059 60-70% NA NA CRC,Normal NA NA boxplot RP11-403F21.4 NA chr9 38433696 38543880 + 110185 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-403F21.4 NA 0.024 10-20% NA NA Breast_cancer,PAAD NA NA boxplot LINC01132 long intergenic non-protein coding RNA 1132 chr1 234724042 234731643 + 7602 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01132 NA 0.2 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CTB-46B19.2 NA chr5 139012647 139051203 + 38557 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTB-46B19.2 NA 0.012 30-40% NA NA HCC NA NA boxplot RP11-705C15.5 NA chr12 9642872 9657070 + 14199 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-705C15.5 NA 0.824 10-20% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(down) NA boxplot RP11-323P17.2 NA chr10 120819307 120825311 + 6005 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-323P17.2 NA 0.012 20-30% NA NA Breast_cancer,Normal,PAAD NA NA boxplot FCGR1CP NA chr1 143874793 143883575 + 8783 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FCGR1CP NA 0.8 10-20% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(up) NA boxplot MIR133A1HG MIR133A1 host gene (non-protein coding) chr18 21825487 21831410 - 5924 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MIR133A1HG NA 0.024 50-60% NA NA Breast_cancer,HCC,PAAD NA NA boxplot RP11-96D1.10 NA chr16 68224713 68227734 + 3022 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-96D1.10 NA 0.929 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot TMLHE-AS1 TMLHE antisense RNA 1 chrX 155466540 155611616 + 145077 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TMLHE-AS1 NA 0.494 50-60% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP1-170O19.23 NA chr7 27147366 27152598 - 5233 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-170O19.23 NA 0.035 70-80% NA NA HCC,PAAD NA NA boxplot PTGES3P2 prostaglandin E synthase 3 (cytosolic) pseudogene 2 chr2 25822469 25822950 + 482 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PTGES3P2 NA 0.224 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-347C12.11 NA chr16 30359825 30360336 + 512 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-347C12.11 NA 0.2 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot PSMC1P4 proteasome (prosome, macropain) 26S subunit, ATPase, 1 pseudogene 4 chr5 56275304 56276630 - 1327 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PSMC1P4 NA 0.012 90-100% NA NA Breast_cancer,CHD NA NA boxplot RPL7AP64 ribosomal protein L7a pseudogene 64 chr17 7140930 7141592 + 663 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL7AP64 NA 0.635 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down),PAAD(down) NA boxplot RP11-697E22.2 NA chr17 37642947 37684252 + 41306 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-697E22.2 NA 0.012 90-100% NA NA Breast_cancer,CRC,HCC NA NA boxplot RP5-858B6.3 NA chr1 230874846 230879015 + 4170 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-858B6.3 NA 0.106 70-80% Testis 1.574170982 Breast_cancer,CRC,HCC,Normal NA NA boxplot RP11-514P8.8 NA chr7 102483344 102543764 - 60421 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-514P8.8 NA 0.929 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(up),HCC(up),PAAD(up) NA boxplot AC015849.16 NA chr17 35893707 35911023 - 17317 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC015849.16 NA 0.294 20-30% Testis 4.619376685 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot KCTD9P6 potassium channel tetramerization domain containing 9 pseudogene 6 chr8 31219894 31220984 - 1091 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KCTD9P6 NA 0.553 20-30% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-613D13.5 NA chr11 43829709 43880726 - 51018 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-613D13.5 NA 0.141 80-90% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot PSME2P2 proteasome activator subunit 2 pseudogene 2 chr13 48771128 48771827 + 700 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PSME2P2 NA 0.906 30-40% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot CTC-563A5.2 NA chr5 179963615 179964419 + 805 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-563A5.2 NA 0.047 30-40% NA NA Breast_cancer,CRC,HCC NA NA boxplot CLIC4P1 chloride intracellular channel 4 pseudogene 1 chr9 22747700 22748234 + 535 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CLIC4P1 NA 0.918 0-10% NA NA CHD,CRC,HCC,Normal,PAAD CHD(down),CRC(up) NA boxplot AC005786.5 NA chr19 3558015 3558486 + 472 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC005786.5 NA 0.035 90-100% Testis 4.518795409 Breast_cancer,CRC,Normal NA NA boxplot RP11-342M3.5 NA chr10 79382328 79409274 + 26947 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-342M3.5 NA 0.165 50-60% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot SPDYE13P speedy/RINGO cell cycle regulator family member E13, pseudogene chr7 75281267 75287118 + 5852 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SPDYE13P NA 0.012 80-90% NA NA HCC,PAAD NA NA boxplot RP1-290I10.3 NA chr6 10423140 10426176 - 3037 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-290I10.3 NA 0.012 80-90% Testis 4.906892038 Breast_cancer NA NA boxplot SNRPCP16 small nuclear ribonucleoprotein polypeptide C pseudogene 16 chr4 9051842 9052051 - 210 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SNRPCP16 NA 0.012 0-10% NA NA Normal,PAAD NA NA boxplot RP11-271F18.3 NA chr10 10394670 10395737 + 1068 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-271F18.3 exo_circ_045036 0.024 50-60% NA NA CRC,Normal NA NA boxplot SUPT4H1P2 SPT4 homolog, DSIF elongation factor subunit pseudogene 2 chr12 8512374 8512726 - 353 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SUPT4H1P2 NA 0.012 50-60% NA NA Normal NA NA boxplot RP11-806O11.1 NA chr8 17808941 17820868 + 11928 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-806O11.1 NA 0.024 20-30% NA NA PAAD NA NA boxplot AC011551.3 NA chr19 46547056 46600861 - 53806 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC011551.3 NA 0.247 40-50% Testis 1.064657713 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot FAM21EP family with sequence similarity 21, member A pseudogene chr10 50021182 50067803 - 46622 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FAM21EP NA 0.388 30-40% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-478C19.2 NA chr12 110387463 110445548 - 58086 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-478C19.2 NA 0.812 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-342K6.2 NA chr2 75669989 75670454 + 466 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-342K6.2 NA 0.306 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RPL23AP72 ribosomal protein L23a pseudogene 72 chr16 47150132 47150566 - 435 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL23AP72 NA 0.035 50-60% Testis 4.906892038 CRC,HCC NA NA boxplot PDZK1P1 PDZ domain containing 1 pseudogene 1 chr1 147994301 148009592 - 15292 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PDZK1P1 NA 0.129 70-80% Kidney 2.488134642 CRC,HCC,Normal,PAAD NA NA boxplot RP1-71H24.1 NA chr12 112907628 113017751 - 110124 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-71H24.1 NA 0.212 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot WDR11-AS1 WDR11 antisense RNA 1 chr10 120761812 120851345 - 89534 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=WDR11-AS1 exo_circ_039519,exo_circ_045060,exo_circ_039518 0.941 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down),HCC(down) NA boxplot RP11-796E10.1 NA chr2 173811076 173811392 + 317 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-796E10.1 NA 0.012 80-90% NA NA NA NA NA boxplot RP1-169K13.3 NA chrX 118116179 118116800 - 622 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-169K13.3 NA 0.341 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot ANKRD20A5P ankyrin repeat domain 20 family member A5, pseudogene chr18 14179097 14252140 + 73044 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ANKRD20A5P NA 0.447 20-30% Testis 1.557762336 Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-214K3.22 NA chr12 123962555 123962817 - 263 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-214K3.22 NA 0.059 60-70% NA NA CRC,Normal,PAAD NA NA boxplot RP11-150O12.4 NA chr8 37600537 37625873 - 25337 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-150O12.4 NA 0.012 80-90% Testis 4.906892038 Breast_cancer NA NA boxplot AC073869.2 NA chr2 131352214 131353239 - 1026 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC073869.2 NA 0.059 80-90% NA NA Breast_cancer,HCC NA NA boxplot XXyac-YX155B6.5 NA chr1 148162360 148186630 + 24271 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=XXyac-YX155B6.5 NA 0.071 80-90% Testis 4.906892038 Breast_cancer,CRC,Normal,PAAD NA NA boxplot RHOT1P3 ras homolog family member T1 pseudogene 3 chr13 18837768 18838098 - 331 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RHOT1P3 NA 0.976 0-10% Testis 2.328422363 CHD,CRC,HCC,Normal,PAAD NA NA boxplot AC004987.9 NA chr7 39833571 39834718 + 1148 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC004987.9 NA 0.929 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot AC069282.6 NA chr7 47956793 47957318 + 526 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC069282.6 NA 0.035 20-30% NA NA Normal NA NA boxplot RP11-676B18.2 NA chr13 37139176 37139585 - 410 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-676B18.2 NA 0.012 60-70% NA NA NA NA NA boxplot EGLN1P1 NA chr15 84633874 84634635 + 762 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=EGLN1P1 NA 0.235 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-134O21.1 NA chr8 2666079 2728451 - 62373 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-134O21.1 exo_circ_028032 0.176 40-50% Testis 1.003060465 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-428G5.7 NA chr12 31953889 31955268 + 1380 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-428G5.7 NA 0.012 90-100% NA NA PAAD NA NA boxplot OR14L1P olfactory receptor family 14 subfamily L member 1 pseudogene chr1 247619643 247620570 + 928 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=OR14L1P NA 0.106 80-90% Testis 3.49864928 CRC,HCC,Normal,PAAD NA NA boxplot CH507-152C13.6 NA chr21 6550749 6553955 - 3207 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CH507-152C13.6 NA 0.012 90-100% NA NA NA NA NA boxplot MRPS36P1 mitochondrial ribosomal protein S36 pseudogene 1 chr3 6773037 6773343 - 307 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MRPS36P1 NA 0.129 60-70% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-572M11.3 NA chr3 113142350 113167819 - 25470 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-572M11.3 NA 0.035 0-10% NA NA Breast_cancer,Normal NA NA boxplot RP11-734J24.1 NA chr8 34874159 34874633 + 475 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-734J24.1 NA 0.706 70-80% NA NA CRC,HCC,Normal,PAAD NA NA boxplot NBPF7 neuroblastoma breakpoint family member 7 chr1 119834870 119844514 - 9645 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NBPF7 NA 0.024 60-70% Small Intestine 3.704162235 Breast_cancer,CRC,Normal NA NA boxplot AL022476.2 NA chr22 43038585 43052366 + 13782 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AL022476.2 NA 0.094 60-70% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot CTD-2207O23.11 NA chr19 7519916 7520460 - 545 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2207O23.11 NA 0.106 70-80% NA NA HCC,Normal NA NA boxplot CTD-2207L17.1 NA chr5 52903908 52904478 + 571 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2207L17.1 NA 0.024 50-60% NA NA CRC NA NA boxplot RP4-593M8.1 NA chr1 92580476 92580821 - 346 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-593M8.1 NA 0.094 60-70% NA NA CRC,Normal,PAAD NA NA boxplot WASF3-AS1 WASF3 antisense RNA 1 chr13 26606544 26641364 - 34821 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=WASF3-AS1 NA 0.141 30-40% Testis 4.846871358 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-71G12.1 NA chr1 157185388 157187405 + 2018 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-71G12.1 NA 0.706 10-20% Testis 4.906892038 Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot RP11-525K10.3 NA chr16 80155053 80563135 - 408083 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-525K10.3 NA 0.094 30-40% Testis 1.48503061 CRC,HCC,PAAD NA NA boxplot GS1-166A23.1 NA chr7 16471184 16471373 + 190 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GS1-166A23.1 NA 0.024 20-30% NA NA HCC,Normal NA NA boxplot CTD-2562J17.6 NA chr11 75260129 75262466 - 2338 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2562J17.6 NA 0.929 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot U47924.29 NA chr12 6964949 6965382 + 434 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=U47924.29 NA 0.094 70-80% NA NA HCC,Normal,PAAD NA NA boxplot LINC01227 long intergenic non-protein coding RNA 1227 chr16 80566794 80572808 - 6015 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01227 NA 0.035 70-80% NA NA Breast_cancer,CRC,PAAD NA NA boxplot SLC2A3P1 solute carrier family 2 (facilitated glucose transporter), member 3 pseudogene 1 chr5 168552277 168553727 - 1451 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SLC2A3P1 NA 1 0-10% NA NA CHD,CRC,HCC,Normal,PAAD CHD(up) NA boxplot AC064834.3 NA chr2 195569628 195572970 - 3343 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC064834.3 NA 0.047 30-40% Testis 4.45987629 HCC,Normal,PAAD NA NA boxplot RPS7P14 ribosomal protein S7 pseudogene 14 chrX 74409518 74410100 + 583 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPS7P14 NA 0.012 90-100% NA NA CHD NA NA boxplot RPL7P51 ribosomal protein L7 pseudogene 51 chr19 51648862 51649610 + 749 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL7P51 NA 0.094 60-70% Testis 4.275842144 Breast_cancer,CRC,HCC,Normal NA NA boxplot CTD-2532N20.1 NA chr8 65842752 65843331 + 580 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2532N20.1 NA 0.094 60-70% Testis 1.252472367 CRC,HCC,Normal NA NA boxplot CTD-2313J17.5 NA chr15 92779757 92781492 - 1736 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2313J17.5 NA 0.129 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-30P6.1 NA chr6 85286076 85290849 + 4774 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-30P6.1 NA 0.047 90-100% NA NA HCC,Normal NA NA boxplot CTC-490E21.14 NA chr19 40779780 40796943 - 17164 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-490E21.14 NA 0.353 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot CTD-2636A23.2 NA chr5 43287601 43290839 + 3239 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2636A23.2 NA 0.329 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot DEFA9P defensin alpha 9, pseudogene chr8 6959289 6960161 - 873 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DEFA9P NA 0.012 50-60% NA NA Breast_cancer,CRC NA NA boxplot RP11-76H14.2 NA chr6 86897118 86897421 + 304 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-76H14.2 NA 0.906 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CTB-12A17.3 NA chr19 46609277 46610779 - 1503 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTB-12A17.3 exo_circ_028996 0.929 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot AC005229.5 NA chr7 148580401 148580799 + 399 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC005229.5 NA 0.012 90-100% Testis 4.906892038 Breast_cancer,CRC NA NA boxplot RP11-351A11.1 NA chr6 118934785 119031541 + 96757 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-351A11.1 NA 0.141 40-50% NA NA Breast_cancer,CRC,Normal NA NA boxplot RP11-566H8.3 NA chr8 31275596 31384279 + 108684 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-566H8.3 NA 0.012 0-10% Testis 4.736260525 Normal NA NA boxplot CTD-3064C13.1 NA chr11 22261209 22262256 - 1048 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-3064C13.1 NA 0.024 80-90% Pituitary 3.91992222 PAAD NA NA boxplot RP11-733D4.2 NA chr10 44488335 44488445 - 111 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-733D4.2 NA 0.047 90-100% NA NA HCC,Normal NA NA boxplot PMS2P5 PMS1 homolog 2, mismatch repair system component pseudogene 5 chr7 74894116 74897835 + 3720 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PMS2P5 NA 0.306 10-20% NA NA CHD,CRC,PAAD CHD(up) NA boxplot AC107982.4 NA chr17 18835707 18842364 + 6658 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC107982.4 NA 0.471 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot C18orf15 chromosome 18 open reading frame 15 chr18 13239543 13242076 + 2534 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=C18orf15 exo_circ_028912 0.012 60-70% NA NA Breast_cancer,CRC,Normal NA NA boxplot RP11-399O19.9 NA chr10 89015836 89017059 + 1224 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-399O19.9 NA 0.141 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-730K11.1 NA chr11 121447331 121453013 - 5683 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-730K11.1 NA 0.341 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-254F7.2 NA chr2 10039092 10040663 - 1572 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-254F7.2 NA 0.835 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),HCC(down) NA boxplot RP11-242G20.1 NA chr10 69684899 69692452 + 7554 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-242G20.1 NA 0.012 90-100% Liver 4.906892038 Breast_cancer NA NA boxplot RP11-1070N10.6 NA chr14 95663256 95692630 + 29375 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1070N10.6 NA 0.694 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down) NA boxplot RP4-622L5.2 NA chr1 32170733 32176568 + 5836 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-622L5.2 NA 0.882 20-30% NA NA CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP13-221M14.2 NA chr1 13146981 13147460 - 480 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP13-221M14.2 NA 0.012 50-60% NA NA PAAD NA NA boxplot RP11-155D18.12 NA chr3 51961212 51974031 - 12820 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-155D18.12 NA 0.094 80-90% NA NA CRC,HCC,Normal NA NA boxplot RP11-1079K10.3 NA chr17 49361165 49369998 + 8834 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1079K10.3 NA 0.176 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CTC-248O19.1 NA chr5 157260122 157266625 - 6504 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-248O19.1 NA 0.082 40-50% Pituitary 2.94419306 CRC,HCC,Normal,PAAD NA NA boxplot RP11-379H8.1 NA chr15 82540870 82562374 + 21505 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-379H8.1 NA 0.035 70-80% NA NA Breast_cancer,CRC,Normal NA NA boxplot LL21NC02-21A1.1 uncharacterized LOC101928745 chr21 45403809 45404369 - 561 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LL21NC02-21A1.1 NA 0.106 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RPS27P16 ribosomal protein S27 pseudogene 16 chr7 30167804 30168004 + 201 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPS27P16 NA 0.071 60-70% NA NA CRC,Normal,PAAD NA NA boxplot RP3-340B19.2 NA chr6 35555873 35556264 + 392 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-340B19.2 NA 0.918 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(down) NA boxplot SUCLG2-AS1 SUCLG2 antisense RNA 1 (head to head) chr3 67654697 67947713 + 293017 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SUCLG2-AS1 exo_circ_017717 0.765 10-20% NA NA CHD,CRC,HCC,Normal,PAAD CHD(down),CRC(down),PAAD(down) NA boxplot RP1-206D15.6 NA chr1 169486076 169486986 + 911 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-206D15.6 NA 0.059 70-80% NA NA CRC,Normal,PAAD NA NA boxplot RP11-486G15.1 NA chr1 84085741 84086233 + 493 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-486G15.1 NA 0.035 50-60% NA NA CRC NA NA boxplot CTA-246H3.8 NA chr22 25327252 25339975 + 12724 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTA-246H3.8 NA 0.047 70-80% Testis 3.660268208 Breast_cancer,CRC,Normal NA NA boxplot HNRNPKP2 heterogeneous nuclear ribonucleoprotein K pseudogene 2 chr2 136199114 136200503 - 1390 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HNRNPKP2 NA 0.388 90-100% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-715J22.6 NA chr16 2476558 2482173 + 5616 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-715J22.6 NA 0.094 50-60% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot AC009495.2 NA chr2 165794851 165810010 + 15160 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC009495.2 NA 0.553 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-153M7.5 NA chr4 153720327 153727722 + 7396 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-153M7.5 exo_circ_033147,exo_circ_049258,exo_circ_010028 0.106 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot MEF2C-AS1 MEF2C antisense RNA 1 chr5 88883328 89466398 + 583071 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MEF2C-AS1 exo_circ_041546,exo_circ_049649,exo_circ_038923,exo_circ_038924,exo_circ_014129,exo_circ_049650,exo_circ_055010,exo_circ_038925,exo_circ_016275 0.965 0-10% NA NA CHD,CRC,HCC,Normal,PAAD CHD(down),HCC(down) NA boxplot AC083864.3 NA chr7 36029611 36055431 + 25821 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC083864.3 NA 0.012 80-90% Testis 4.53578282 Breast_cancer NA NA boxplot RP11-319G6.1 NA chr3 139389815 139583319 + 193505 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-319G6.1 NA 0.447 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-469A15.2 NA chr1 200333193 200478293 + 145101 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-469A15.2 NA 0.082 20-30% Liver 3.325515023 Breast_cancer,CRC,HCC,Normal NA NA boxplot GTF2IP14 general transcription factor IIi pseudogene 14 chr7 65084103 65100232 + 16130 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GTF2IP14 NA 0.518 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot ZNF767P zinc finger family member 767, pseudogene chr7 149547154 149624752 - 77599 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ZNF767P exo_circ_036353,exo_circ_039146,exo_circ_026519 0.965 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP4-580N22.2 NA chr1 235957879 235971825 - 13947 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-580N22.2 NA 0.035 90-100% NA NA CRC,HCC,Normal NA NA boxplot RP11-520H14.7 NA chr1 228121523 228123771 + 2249 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-520H14.7 NA 0.024 80-90% NA NA Breast_cancer,CRC,Normal,PAAD NA NA boxplot RP11-271K21.12 NA chr3 141936707 141938547 - 1841 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-271K21.12 NA 0.035 70-80% NA NA Breast_cancer,CRC,Normal NA NA boxplot UBTFL10 upstream binding transcription factor, RNA polymerase I-like 10 (pseudogene) chr11 89700764 89701325 + 562 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=UBTFL10 NA 0.012 30-40% NA NA Breast_cancer,Normal NA NA boxplot CTAGE13P CTAGE family member 13, pseudogene chr6 168286905 168289350 - 2446 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTAGE13P NA 0.024 80-90% Testis 4.889692415 Breast_cancer,HCC,Normal NA NA boxplot RP11-241J12.3 NA chr5 80746339 80746819 - 481 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-241J12.3 NA 0.024 30-40% NA NA CRC,Normal NA NA boxplot AC100848.1 NA chr18 64147209 64159299 + 12091 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC100848.1 NA 0.012 0-10% Testis 4.906892038 Normal NA NA boxplot ANO7P1 anoctamin 7 pseudogene 1 chr1 16215909 16228027 - 12119 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ANO7P1 NA 0.4 40-50% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot PROS2P protein S (beta) pseudogene chr3 90202316 90257415 - 55100 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PROS2P NA 0.012 90-100% NA NA Breast_cancer,HCC,Normal NA NA boxplot NFE4 nuclear factor, erythroid 4 chr7 102973522 102988856 + 15335 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NFE4 NA 0.776 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CRC(up),HCC(up),PAAD(up) NA boxplot AC016700.5 NA chr2 70124036 70125317 - 1282 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC016700.5 NA 0.447 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-100L22.1 NA chr8 92668836 92679594 + 10759 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-100L22.1 NA 0.282 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-213G2.2 NA chr9 85785722 85793480 - 7759 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-213G2.2 NA 0.035 60-70% Testis 4.13967414 HCC,Normal NA NA boxplot CH507-236L23.1 NA chr21 7020599 7025166 + 4568 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CH507-236L23.1 NA 0.012 20-30% NA NA HCC NA NA boxplot AP000569.9 NA chr21 33967101 33968573 - 1473 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AP000569.9 NA 0.271 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot ELOVL2-AS1 ELOVL2 antisense RNA 1 chr6 11043524 11078226 + 34703 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ELOVL2-AS1 NA 0.012 0-10% Testis 4.157681195 Breast_cancer,HCC NA NA boxplot RP11-1114A5.4 NA chrX 136840931 136847797 - 6867 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1114A5.4 NA 0.212 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-887P2.5 NA chr12 93707791 93737823 - 30033 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-887P2.5 NA 0.082 30-40% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot KCTD9P3 potassium channel tetramerization domain containing 9 pseudogene 3 chr9 37477149 37478317 + 1169 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KCTD9P3 NA 0.329 70-80% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-334C17.5 NA chr17 80200673 80205949 - 5277 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-334C17.5 NA 0.376 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-342M1.3 NA chr1 42834681 42846422 - 11742 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-342M1.3 NA 0.576 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AP001434.2 NA chr21 38237217 38238201 - 985 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AP001434.2 NA 0.012 10-20% Whole Blood 3.123841844 HCC NA NA boxplot RTEL1P1 regulator of telomere elongation helicase 1 pseudogene 1 chr4 112356135 112359819 + 3685 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RTEL1P1 NA 0.235 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-474P2.5 NA chr12 46239106 46239473 - 368 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-474P2.5 NA 0.047 10-20% NA NA CRC,PAAD NA NA boxplot AC092301.3 NA chr19 45830164 45831108 + 945 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC092301.3 NA 0.141 80-90% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-962G15.1 NA chr8 36537391 36779164 - 241774 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-962G15.1 NA 0.012 80-90% Testis 4.906892038 NA NA NA boxplot RP11-669M16.1 NA chr4 14164455 14242813 + 78359 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-669M16.1 NA 0.294 30-40% Spleen 4.395370671 CRC,HCC,Normal,PAAD NA NA boxplot RP11-65J3.6 NA chr9 129380136 129380470 - 335 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-65J3.6 NA 0.024 10-20% NA NA CRC,Normal NA NA boxplot RPS29P22 ribosomal protein S29 pseudogene 22 chr17 28116239 28116406 - 168 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPS29P22 NA 0.035 10-20% NA NA Normal NA NA boxplot MTND1P5 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 1 pseudogene 5 chr8 103085651 103086590 + 940 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MTND1P5 NA 0.012 90-100% NA NA NA NA NA boxplot DUXAP9 double homeobox A pseudogene 9 chr14 19062316 19115270 + 52955 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DUXAP9 NA 0.376 0-10% NA NA CRC,HCC,Normal,PAAD PAAD(up) NA boxplot CTD-2553L13.10 NA chr19 34733298 34733837 - 540 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2553L13.10 NA 0.118 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP13-870H17.3 NA chr11 1049880 1055749 + 5870 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP13-870H17.3 NA 0.129 60-70% Spleen 1.071739095 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-452I5.2 NA chr17 74747319 74748912 - 1594 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-452I5.2 NA 0.541 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CTA-392C11.1 NA chr8 40298741 40343402 - 44662 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTA-392C11.1 NA 0.024 10-20% Testis 4.167909494 PAAD NA NA boxplot RP5-974N19.1 NA chr20 14933843 14935363 - 1521 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-974N19.1 NA 0.012 10-20% NA NA HCC NA NA boxplot RP11-50B3.1 NA chr11 126179497 126179698 - 202 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-50B3.1 NA 0.035 50-60% NA NA CRC,PAAD NA NA boxplot XXyac-YX65C7_A.2 NA chr6 169213254 169239565 + 26312 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=XXyac-YX65C7_A.2 NA 0.188 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-34P13.16 NA chr1 137682 137965 - 284 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-34P13.16 NA 0.247 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot AC136289.1 NA chr3 63741827 63827445 - 85619 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC136289.1 NA 0.212 40-50% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot RP11-281P23.1 NA chr4 11469250 11478196 + 8947 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-281P23.1 NA 0.118 20-30% Bladder 1.435816599 Breast_cancer,CRC,HCC,Normal NA NA boxplot RPL3P4 ribosomal protein L3 pseudogene 4 chr14 98972879 98973301 - 423 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL3P4 NA 1 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CRC(down),HCC(down) NA boxplot RP5-875O13.6 NA chr1 16548651 16552531 - 3881 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-875O13.6 NA 0.024 60-70% Muscle 2.511800332 CRC,HCC,Normal NA NA boxplot DSTNP2 destrin (actin depolymerizing factor) pseudogene 2 chr12 6884682 6885786 + 1105 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DSTNP2 NA 0.965 0-10% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-144A16.8 NA chr9 60943311 60964185 - 20875 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-144A16.8 NA 0.047 60-70% NA NA CRC,HCC NA NA boxplot LINC00327 long intergenic non-protein coding RNA 327 chr13 23466571 23487464 + 20894 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00327 NA 0.141 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up) NA boxplot RP11-361L15.4 NA chr16 66942712 66963256 + 20545 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-361L15.4 NA 0.765 10-20% NA NA CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-42O4.2 NA chr20 35174355 35174919 - 565 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-42O4.2 NA 0.259 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-441O15.3 NA chr10 99431191 99438117 + 6927 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-441O15.3 NA 0.129 30-40% NA NA Breast_cancer,CRC,Normal,PAAD NA NA boxplot RP11-210K20.2 NA chr18 31844388 31845178 + 791 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-210K20.2 NA 0.129 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot ST3GAL5-AS1 ST3GAL5 antisense RNA 1 (head to head) chr2 85889280 85890980 + 1701 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ST3GAL5-AS1 NA 0.235 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot INHBA-AS1 INHBA antisense RNA 1 chr7 41693916 41779388 + 85473 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=INHBA-AS1 NA 0.529 10-20% Brain 2.065514728 CHD,CRC,HCC,Normal,PAAD CHD(down),HCC(down),PAAD(down) NA boxplot RP11-723O4.2 NA chr3 128861313 128871540 - 10228 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-723O4.2 NA 0.059 20-30% Testis 1.140516992 Breast_cancer,Normal,PAAD NA NA boxplot RP11-212D19.5 NA chr11 114453064 114454123 + 1060 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-212D19.5 NA 0.012 90-100% NA NA CRC NA NA boxplot AC006369.3 NA chr2 37744333 37747046 + 2714 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC006369.3 NA 0.012 70-80% NA NA Normal NA NA boxplot RP11-770J1.3 NA chr11 118511911 118531094 - 19184 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-770J1.3 NA 0.612 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot KB-1043D8.6 NA chr8 96235427 96238034 + 2608 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KB-1043D8.6 NA 0.165 60-70% Testis 2.842511753 CRC,HCC,Normal,PAAD NA NA boxplot RP11-355F16.1 NA chr2 75154366 75189949 + 35584 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-355F16.1 NA 0.459 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD PAAD(up) NA boxplot RP11-61D1.2 NA chr18 54525434 54525563 + 130 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-61D1.2 NA 0.012 80-90% Esophagus 4.906892038 HCC NA NA boxplot RP11-651P23.4 NA chr3 149982181 149983308 - 1128 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-651P23.4 NA 0.929 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),PAAD(down) NA boxplot RP11-804A23.2 NA chr11 60835996 60842965 - 6970 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-804A23.2 NA 0.141 70-80% Testis 4.906892038 CRC,HCC,Normal,PAAD NA NA boxplot RP11-161M6.2 NA chr16 975761 981596 - 5836 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-161M6.2 NA 0.506 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot MTCO3P11 MT-CO3 pseudogene 11 chr9 5100236 5101009 + 774 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MTCO3P11 NA 0.106 70-80% NA NA CRC,HCC,Normal NA NA boxplot RPL35P3 ribosomal protein L35 pseudogene 3 chr6 105302453 105302823 - 371 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL35P3 NA 0.082 60-70% NA NA Breast_cancer,CRC,HCC,PAAD NA NA boxplot RP11-756P10.3 NA chr4 188738373 188739494 + 1122 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-756P10.3 NA 0.929 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-719K4.3 NA chr16 14727282 14733347 - 6066 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-719K4.3 NA 0.012 90-100% NA NA HCC NA NA boxplot RP11-779O18.3 NA chr5 172762980 172777774 + 14795 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-779O18.3 NA 0.188 40-50% Testis 3.190712664 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CTD-2265O21.7 NA chr19 12880969 12884088 + 3120 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2265O21.7 NA 0.047 70-80% Testis 4.906892038 Normal NA NA boxplot SMPD5 sphingomyelin phosphodiesterase 5 chr8 144049129 144051522 + 2394 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SMPD5 NA 0.129 80-90% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot RP11-268G13.1 NA chr20 11685144 11687323 - 2180 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-268G13.1 NA 0.012 0-10% Testis 4.057935674 Breast_cancer,Normal NA NA boxplot RP11-288A5.2 NA chr10 127734562 127736996 - 2435 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-288A5.2 NA 0.059 50-60% NA NA Breast_cancer,CRC,Normal,PAAD NA NA boxplot RP11-124N2.1 NA chr3 126084220 126095349 + 11130 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-124N2.1 NA 0.106 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CH17-437K3.1 NA chr1 121396754 121463129 + 66376 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CH17-437K3.1 NA 0.106 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot IDI2-AS1 IDI2 antisense RNA 1 chr10 1022666 1044201 + 21536 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=IDI2-AS1 NA 0.106 50-60% Heart 2.41284963 HCC,Normal,PAAD NA NA boxplot CTD-2547E10.3 NA chr16 21347139 21352138 + 5000 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2547E10.3 NA 0.835 10-20% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot RP11-794P6.1 NA chr11 111414242 111418186 - 3945 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-794P6.1 NA 0.024 80-90% Testis 3.963670903 Breast_cancer,HCC NA NA boxplot RP11-629B11.4 NA chr4 74085995 74086672 - 678 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-629B11.4 NA 0.012 30-40% NA NA CRC,Normal,PAAD NA NA boxplot RP11-454F8.2 NA chr16 53298224 53299792 + 1569 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-454F8.2 NA 0.2 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot ATP6V1G1P6 ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G1 pseudogene 6 chr5 78222184 78222517 + 334 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ATP6V1G1P6 NA 0.012 80-90% NA NA CRC NA NA boxplot RP5-1031J8.1 NA chr20 39785721 39813229 + 27509 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-1031J8.1 NA 0.012 30-40% NA NA Breast_cancer,HCC,Normal NA NA boxplot CTD-3032J10.3 NA chr19 17207138 17208010 - 873 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-3032J10.3 NA 0.047 50-60% NA NA CRC,Normal NA NA boxplot RP11-334E6.12 NA chr11 119417951 119419114 + 1164 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-334E6.12 NA 0.082 70-80% NA NA CRC,HCC,PAAD NA NA boxplot RP5-1112D6.4 NA chr6 111277932 111278742 + 811 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-1112D6.4 exo_circ_026461,exo_circ_025791 0.294 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot IGF2-AS IGF2 antisense RNA chr11 2140501 2148666 + 8166 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=IGF2-AS NA 0.012 70-80% NA NA Breast_cancer,Normal NA NA boxplot MIR663AHG MIR663A host gene chr20 26186920 26251526 - 64607 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MIR663AHG NA 0.024 50-60% NA NA Breast_cancer,CRC,Normal,PAAD NA NA boxplot RP11-433C9.2 NA chr3 184401537 184439648 + 38112 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-433C9.2 NA 0.024 40-50% Testis 2.118678986 Breast_cancer,HCC,PAAD NA NA boxplot RP11-379F4.4 NA chr3 158732263 158784070 + 51808 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-379F4.4 NA 0.706 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),HCC(down) NA boxplot RP4-726F1.2 NA chr1 79323769 79324852 - 1084 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-726F1.2 NA 0.012 80-90% NA NA CRC NA NA boxplot LINC01067 NA chr13 109310135 109311773 + 1639 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01067 NA 0.012 80-90% NA NA Breast_cancer NA NA boxplot RP11-834C11.14 NA chr12 54017110 54035361 + 18252 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-834C11.14 NA 0.224 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-1006G14.1 NA chr15 72615810 72618250 + 2441 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1006G14.1 NA 0.059 10-20% Testis 1.329072771 Breast_cancer,CRC,PAAD NA NA boxplot RP11-124O11.1 NA chr10 42871521 42874060 + 2540 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-124O11.1 NA 0.024 20-30% Testis 2.011935815 Breast_cancer,Normal NA NA boxplot RP11-457K10.1 NA chr3 109648107 109810861 + 162755 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-457K10.1 NA 0.024 10-20% NA NA Breast_cancer,CRC,PAAD NA NA boxplot CDY4P chromodomain protein, Y-linked 4 pseudogene chrY 12801973 12803830 - 1858 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CDY4P NA 0.012 60-70% Prostate 4.906892038 CRC NA NA boxplot SALRNA2 senescence associated long non-coding RNA 2 chr15 70635249 70637314 + 2066 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SALRNA2 NA 0.012 0-10% NA NA Breast_cancer,CRC NA NA boxplot RP5-821D11.7 NA chr22 41831215 41834665 - 3451 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-821D11.7 NA 0.318 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-389C8.1 NA chr5 72381794 72382393 + 600 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-389C8.1 NA 0.024 60-70% NA NA CRC NA NA boxplot RWDD4P1 RWD domain containing 4 pseudogene 1 chr7 105301522 105302086 + 565 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RWDD4P1 NA 0.859 10-20% NA NA CHD,CRC,HCC,Normal,PAAD CHD(down),HCC(down) NA boxplot RP11-30M20.1 NA chrX 66055587 66056587 - 1001 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-30M20.1 NA 0.012 80-90% NA NA Breast_cancer,CRC NA NA boxplot RP11-1319K7.1 NA chr5 70094659 70128434 - 33776 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1319K7.1 NA 0.847 0-10% NA NA CRC,HCC,Normal,PAAD CRC(up),HCC(up),PAAD(up) NA boxplot RP11-89C3.2 NA chr11 111107060 111107750 - 691 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-89C3.2 NA 0.012 90-100% Testis 4.906892038 Normal NA NA boxplot CH507-216K13.2 NA chr21 10122273 10129029 + 6757 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CH507-216K13.2 NA 0.012 70-80% NA NA Breast_cancer,Normal NA NA boxplot RP11-187C18.4 NA chr9 41341000 41342041 - 1042 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-187C18.4 NA 0.012 60-70% NA NA CRC NA NA boxplot FOXN3-AS1 FOXN3 antisense RNA 1 chr14 89417354 89419793 + 2440 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FOXN3-AS1 NA 0.718 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-208P4.1 NA chr3 164001606 164002465 - 860 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-208P4.1 NA 0.012 90-100% NA NA PAAD NA NA boxplot UBE2E1-AS1 UBE2E1 antisense RNA 1 chr3 23804024 23806905 - 2882 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=UBE2E1-AS1 NA 0.035 80-90% NA NA Normal NA NA boxplot TSSC2 tumor suppressing subtransferable candidate 2 pseudogene chr11 3380961 3408978 + 28018 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TSSC2 NA 0.106 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-478C6.4 NA chr4 342821 342962 - 142 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-478C6.4 NA 0.929 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(down),PAAD(down) NA boxplot RP11-556O9.3 NA chr17 63182166 63182817 + 652 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-556O9.3 NA 0.012 50-60% Testis 3.601955765 CRC,Normal NA NA boxplot CHCHD3P3 coiled-coil-helix-coiled-coil-helix domain containing 3 pseudogene 3 chr1 27200834 27201473 - 640 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CHCHD3P3 NA 0.776 20-30% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot LINC01031 long intergenic non-protein coding RNA 1031 chr1 193304745 193365953 + 61209 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01031 NA 0.176 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-267M23.4 NA chr8 94553722 94569745 + 16024 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-267M23.4 NA 0.129 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-578F21.6 NA chr15 28719377 28738431 - 19055 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-578F21.6 NA 0.129 80-90% Thyroid 1.781479864 HCC,Normal,PAAD NA NA boxplot MBNL1-AS1 MBNL1 antisense RNA 1 chr3 152262616 152269555 - 6940 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MBNL1-AS1 NA 0.988 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RPL23AP49 ribosomal protein L23a pseudogene 49 chr3 75624686 75625153 - 468 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL23AP49 NA 0.471 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot PICSAR NA chr21 44999208 45004727 - 5520 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PICSAR NA 0.024 0-10% NA NA PAAD NA NA boxplot RP11-1C8.4 NA chr8 103483398 103501676 - 18279 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1C8.4 NA 0.035 30-40% Pituitary 2.359906679 Breast_cancer,PAAD NA NA boxplot LINC01605 long intergenic non-protein coding RNA 1605 chr8 37421341 37554183 - 132843 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01605 NA 0.176 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-119H12.6 NA chr4 112880298 112882330 - 2033 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-119H12.6 NA 0.012 20-30% Uterus 2.373779141 Normal NA NA boxplot MNX1-AS2 MNX1 antisense RNA 2 chr7 157006307 157007132 + 826 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MNX1-AS2 NA 0.024 70-80% Pancreas 2.33327479 Breast_cancer,Normal NA NA boxplot RP3-323P24.3 NA chrX 57121662 57127243 + 5582 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-323P24.3 NA 0.541 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot MICD MHC class I polypeptide-related sequence D (pseudogene) chr6 29970801 29972464 - 1664 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MICD NA 0.024 70-80% NA NA Breast_cancer,Normal NA NA boxplot RP5-832C2.5 NA chr1 1574975 1577075 + 2101 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-832C2.5 NA 0.318 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot AC079145.4 NA chr2 19990217 20004210 + 13994 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC079145.4 NA 0.012 50-60% NA NA Breast_cancer NA NA boxplot LA16c-444G7.2 NA chr16 88194281 88195217 + 937 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LA16c-444G7.2 NA 0.024 90-100% NA NA HCC NA NA boxplot RP11-500G22.4 NA chr10 121956782 121957098 + 317 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-500G22.4 NA 0.035 50-60% NA NA HCC,Normal NA NA boxplot RP13-16H11.8 NA chr10 26695091 26697625 - 2535 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP13-16H11.8 NA 0.047 50-60% NA NA CRC,Normal,PAAD NA NA boxplot AC010880.1 NA chr2 16354256 16432702 + 78447 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC010880.1 NA 0.024 0-10% Testis 4.906892038 HCC,Normal NA NA boxplot RP11-94B19.7 NA chr18 76254292 76255214 - 923 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-94B19.7 NA 0.012 80-90% Testis 4.191228869 NA NA NA boxplot RP11-31I22.3 NA chr17 33565764 33624122 + 58359 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-31I22.3 NA 0.012 70-80% Testis 3.003117551 PAAD NA NA boxplot AC069154.4 NA chr2 119698623 119700151 + 1529 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC069154.4 NA 0.012 80-90% Testis 1.736079936 NA NA NA boxplot CBR3-AS1 CBR3 antisense RNA 1 chr21 36131767 36175815 - 44049 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CBR3-AS1 NA 0.494 40-50% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP4-798A10.7 NA chr1 16514645 16515754 + 1110 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-798A10.7 NA 0.024 30-40% NA NA HCC,Normal NA NA boxplot CTA-384D8.36 NA chr22 50523926 50524780 + 855 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTA-384D8.36 NA 0.553 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC068657.2 NA chr5 160023740 160024045 - 306 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC068657.2 NA 0.176 50-60% NA NA CRC,HCC,Normal NA NA boxplot AC004231.2 NA chr17 40921430 40975926 + 54497 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC004231.2 NA 0.024 20-30% Skin 2.100446433 Breast_cancer,HCC,Normal NA NA boxplot AC006486.10 NA chr19 42242775 42244973 + 2199 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC006486.10 NA 0.106 70-80% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot XXbac-BPG154L12.5 NA chr6 32255284 32350039 + 94756 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=XXbac-BPG154L12.5 NA 0.212 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot AC023347.2 NA chr2 126311466 126311927 - 462 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC023347.2 NA 0.012 90-100% NA NA NA NA NA boxplot RP11-394O4.3 NA chr5 149372174 149375116 + 2943 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-394O4.3 NA 0.118 60-70% Testis 1.121809794 CRC,HCC,Normal,PAAD NA NA boxplot RP11-873E20.1 NA chr18 35716370 35717978 + 1609 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-873E20.1 NA 0.224 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot SNHG19 small nucleolar RNA host gene 19 chr16 2154797 2155358 - 562 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SNHG19 NA 0.565 30-40% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot AP001469.9 NA chr21 46251549 46254133 - 2585 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AP001469.9 NA 0.129 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-174F8.1 NA chr4 150422645 150423642 - 998 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-174F8.1 exo_circ_016100,exo_circ_054496 0.071 60-70% Testis 3.429663736 Breast_cancer,CRC,HCC,Normal NA NA boxplot RP4-710M16.2 NA chr1 56414963 56415966 + 1004 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-710M16.2 NA 0.047 70-80% Liver 2.693059727 Breast_cancer,HCC NA NA boxplot CCDC74BP1 coiled-coil domain containing 74B pseudogene 1 chr22 20587496 20592218 - 4723 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CCDC74BP1 NA 0.2 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot SCOCP1 short coiled-coil protein pseudogene 1 chr14 60158976 60159324 + 349 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SCOCP1 NA 0.012 50-60% NA NA NA NA NA boxplot RP11-640B6.1 NA chr4 36065060 36065726 - 667 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-640B6.1 NA 0.082 50-60% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot CH17-13I23.3 NA chr1 143419625 143420207 - 583 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CH17-13I23.3 NA 0.2 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot AC017002.1 NA chr2 111491273 111570974 + 79702 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC017002.1 NA 0.118 80-90% NA NA HCC,Normal,PAAD NA NA boxplot AC012358.4 NA chr2 55224280 55225908 + 1629 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC012358.4 NA 0.247 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot BOLA2P3 bolA family member 2 pseudogene 3 chr6 21602128 21602383 + 256 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=BOLA2P3 NA 0.012 90-100% NA NA Breast_cancer,CRC NA NA boxplot LA16c-407A10.3 NA chr16 568837 576257 + 7421 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LA16c-407A10.3 NA 0.647 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CTB-75G16.1 NA chr17 36574462 36575325 - 864 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTB-75G16.1 NA 0.024 90-100% NA NA Breast_cancer,CRC,Normal NA NA boxplot CTB-31O20.3 NA chr19 1815249 1815873 + 625 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTB-31O20.3 NA 0.106 80-90% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot PTPRG-AS1 PTPRG antisense RNA 1 chr3 62260865 62369330 - 108466 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PTPRG-AS1 NA 0.141 60-70% Testis 1.153706413 CRC,HCC,Normal,PAAD NA NA boxplot DDX11L5 DEAD/H-box helicase 11 like 5 chr9 12134 13783 + 1650 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DDX11L5 NA 0.788 0-10% Testis 4.106966585 Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up),CRC(up),PAAD(up) NA boxplot RP11-466C23.5 NA chr11 63834667 63834943 - 277 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-466C23.5 NA 0.071 20-30% Spleen 1.242064207 CRC,HCC,Normal NA NA boxplot TIPARP-AS1 TIPARP antisense RNA 1 chr3 156671862 156674378 - 2517 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TIPARP-AS1 NA 0.765 10-20% Testis 2.031920237 Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down),HCC(down) NA boxplot HNRNPA1P34 heterogeneous nuclear ribonucleoprotein A1 pseudogene 34 chr12 9027532 9029089 - 1558 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HNRNPA1P34 NA 0.024 20-30% Testis 4.013246765 Breast_cancer,CRC,Normal NA NA boxplot LINC01359 long intergenic non-protein coding RNA 1359 chr1 64972225 65002489 - 30265 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01359 exo_circ_020627 0.576 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-2E11.5 NA chr7 130481491 130484392 - 2902 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-2E11.5 NA 0.129 40-50% Pituitary 1.158143481 CRC,HCC,Normal,PAAD NA NA boxplot USP9YP25 ubiquitin specific peptidase 9, Y-linked pseudogene 25 chrY 23734193 23736249 + 2057 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=USP9YP25 NA 0.012 80-90% NA NA HCC NA NA boxplot EIF3FP3 eukaryotic translation initiation factor 3 subunit F pseudogene 3 chr2 58251440 58252525 + 1086 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=EIF3FP3 NA 1 0-10% NA NA CHD,CRC,HCC,Normal,PAAD CHD(up),CRC(down) NA boxplot AC144836.1 NA chr17 1241939 1254000 - 12062 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC144836.1 exo_circ_040339 0.012 80-90% NA NA NA NA NA boxplot RP11-127B16.1 NA chr6 92723003 92723829 - 827 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-127B16.1 NA 0.047 70-80% Testis 4.449605528 HCC,Normal,PAAD NA NA boxplot RP11-337C18.10 NA chr1 147173186 147252659 + 79474 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-337C18.10 NA 0.859 10-20% NA NA CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP1-60O19.1 NA chr6 106717452 106787541 - 70090 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-60O19.1 NA 0.153 10-20% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot RP11-1152H15.1 NA chr14 87710419 87872291 - 161873 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1152H15.1 NA 0.035 80-90% Testis 4.74011012 Breast_cancer,HCC,Normal NA NA boxplot RPL26P30 ribosomal protein L26 pseudogene 30 chr11 2335132 2335776 - 645 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL26P30 NA 0.918 10-20% NA NA CHD,CRC,HCC,Normal,PAAD CHD(down),CRC(down) NA boxplot RP11-307C19.2 NA chr15 77568970 77608888 + 39919 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-307C19.2 NA 0.035 50-60% NA NA Breast_cancer,Normal,PAAD NA NA boxplot AC079753.4 NA chr2 112853328 112854122 + 795 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC079753.4 NA 0.047 40-50% Testis 4.297986999 CRC,PAAD NA NA boxplot RPL7L1P2 ribosomal protein L7 like 1 pseudogene 2 chr7 51259429 51260167 - 739 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL7L1P2 NA 0.024 0-10% Testis 4.906892038 Breast_cancer,PAAD NA NA boxplot RP11-511B23.2 NA chr12 93003415 93215679 - 212265 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-511B23.2 exo_circ_039928 0.212 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CACTIN-AS1 CACTIN antisense RNA 1 chr19 3607247 3613930 + 6684 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CACTIN-AS1 NA 0.424 50-60% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-867O8.5 NA chr11 65367438 65375299 + 7862 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-867O8.5 NA 0.459 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot MRPL35P3 mitochondrial ribosomal protein L35 pseudogene 3 chr10 74527584 74527947 + 364 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MRPL35P3 NA 0.082 70-80% Testis 2.89101809 CRC,Normal NA NA boxplot RP11-497H16.7 NA chr5 70462244 70479215 + 16972 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-497H16.7 NA 0.741 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot SEPT7P3 septin 7 pseudogene 3 chr7 35946294 35972587 + 26294 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SEPT7P3 NA 0.988 0-10% NA NA CHD,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RPSAP22 ribosomal protein SA pseudogene 22 chr2 85490930 85491780 - 851 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPSAP22 NA 0.024 30-40% NA NA HCC,Normal NA NA boxplot RP11-521D12.5 NA chr2 9757496 9770341 - 12846 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-521D12.5 NA 0.412 20-30% Skin 2.329242702 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-517I3.2 NA chr5 126496279 126498604 + 2326 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-517I3.2 NA 0.2 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RPS12P26 ribosomal protein S12 pseudogene 26 chr15 90206572 90206967 + 396 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPS12P26 NA 0.071 80-90% NA NA Breast_cancer,CRC,Normal,PAAD NA NA boxplot RP11-715J22.3 NA chr16 2452581 2452977 - 397 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-715J22.3 NA 0.071 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot LINC01149 long intergenic non-protein coding RNA 1149 chr6 31441667 31446973 + 5307 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01149 NA 0.012 50-60% NA NA Breast_cancer,Normal NA NA boxplot RP11-588G21.2 NA chr12 69713633 69738568 - 24936 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-588G21.2 NA 0.024 10-20% Testis 4.542985506 Breast_cancer,HCC NA NA boxplot TAS2R62P taste 2 receptor member 62 pseudogene chr7 143437034 143437973 + 940 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TAS2R62P NA 0.024 90-100% NA NA Breast_cancer,CRC NA NA boxplot RP11-120K18.2 NA chr16 31402565 31404699 + 2135 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-120K18.2 NA 0.012 90-100% NA NA Breast_cancer NA NA boxplot RP11-12K22.1 NA chr4 63468701 63494278 - 25578 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-12K22.1 NA 0.012 60-70% NA NA HCC NA NA boxplot EIF2S2P5 eukaryotic translation initiation factor 2 subunit 2 beta pseudogene 5 chr1 114468315 114469282 + 968 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=EIF2S2P5 NA 0.024 10-20% NA NA Normal,PAAD NA NA boxplot GRAMD4P5 GRAM domain containing 4 pseudogene 5 chr15 20813299 20814958 + 1660 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GRAMD4P5 NA 0.012 90-100% Testis 4.906892038 Breast_cancer,PAAD NA NA boxplot RP5-858L17.1 NA chr20 1888128 1894374 - 6247 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-858L17.1 NA 0.424 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-44N12.5 NA chr8 98943595 98944098 + 504 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-44N12.5 NA 0.012 90-100% NA NA NA NA NA boxplot RP11-666A20.4 NA chr3 125908005 125910272 - 2268 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-666A20.4 NA 0.024 70-80% Testis 1.01406991 CRC,Normal NA NA boxplot AQP7P1 aquaporin 7 pseudogene 1 chr9 63317067 63333091 - 16025 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AQP7P1 NA 0.612 30-40% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-753H16.5 NA chr12 54353792 54466985 + 113194 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-753H16.5 NA 0.035 70-80% Bladder 1.298954979 Breast_cancer,HCC,Normal NA NA boxplot RP11-534L6.2 NA chr10 48664199 48672424 - 8226 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-534L6.2 NA 0.024 0-10% NA NA Breast_cancer,HCC,Normal NA NA boxplot RP11-120K24.5 NA chr13 113009671 113010319 + 649 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-120K24.5 NA 0.012 40-50% NA NA Breast_cancer,CRC NA NA boxplot CTB-51J22.1 NA chr7 74059576 74062284 - 2709 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTB-51J22.1 NA 0.035 50-60% NA NA Breast_cancer,Normal,PAAD NA NA boxplot COX6CP8 cytochrome c oxidase subunit VIc pseudogene 8 chr8 64331927 64332152 + 226 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=COX6CP8 NA 0.012 60-70% NA NA CRC,Normal NA NA boxplot FAM27E2 family with sequence similarity 27 member E2 chr9 41648023 41648425 + 403 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FAM27E2 NA 0.212 40-50% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-350N15.4 NA chr8 38421889 38426096 + 4208 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-350N15.4 NA 0.024 90-100% NA NA Breast_cancer,HCC,Normal NA NA boxplot AL133244.1 NA chr2 33056333 33063113 - 6781 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AL133244.1 NA 0.082 90-100% NA NA CRC,HCC,Normal NA NA boxplot SRRM2-AS1 SRRM2 antisense RNA 1 chr16 2737076 2752600 - 15525 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SRRM2-AS1 NA 0.282 40-50% Testis 2.266111603 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-416H1.2 NA chr2 121688203 121689714 + 1512 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-416H1.2 NA 0.012 90-100% NA NA NA NA NA boxplot RP11-74J13.9 NA chr13 41229180 41229676 - 497 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-74J13.9 NA 0.094 30-40% NA NA CRC,HCC,Normal NA NA boxplot CTD-2620I22.1 NA chr19 52956041 52981654 - 25614 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2620I22.1 NA 0.224 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CTD-2201E18.3 NA chr5 43014414 43067419 - 53006 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2201E18.3 NA 0.929 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down) NA boxplot AC112518.3 NA chr4 73710302 73714527 + 4226 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC112518.3 NA 0.012 80-90% Testis 4.906892038 NA NA NA boxplot RP11-3K16.2 NA chr3 169613510 169623951 - 10442 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-3K16.2 NA 0.071 10-20% NA NA HCC,Normal,PAAD NA NA boxplot SNHG10 small nucleolar RNA host gene 10 chr14 95532297 95534872 - 2576 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SNHG10 NA 0.694 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up),PAAD(up) NA boxplot RP11-137N23.1 NA chr11 18665050 18665548 + 499 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-137N23.1 NA 0.024 80-90% Ovary 1.2626025 Breast_cancer,Normal NA NA boxplot RP11-302B13.1 NA chr12 48903418 48903813 - 396 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-302B13.1 NA 0.071 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot AKR1C6P aldo-keto reductase family 1, member C6, pseudogene chr10 4871901 4891975 - 20075 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AKR1C6P NA 0.071 60-70% Liver 4.607284437 Breast_cancer,HCC,Normal,PAAD NA NA boxplot FAM86LP family with sequence similarity 86, member A pseudogene chr7 6931684 6939603 - 7920 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FAM86LP NA 0.094 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-863K10.4 NA chr8 37747338 37748004 - 667 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-863K10.4 NA 0.694 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot ZBED3-AS1 ZBED3 antisense RNA 1 chr5 77086740 77166909 + 80170 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ZBED3-AS1 NA 0.447 30-40% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot TESC-AS1 TESC antisense RNA 1 (head to head) chr12 117099481 117142091 + 42611 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TESC-AS1 NA 0.024 60-70% NA NA Breast_cancer,HCC NA NA boxplot LINC01537 long intergenic non-protein coding RNA 1537 chr11 72570660 72573229 + 2570 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01537 NA 0.412 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up) NA boxplot RP11-697K23.3 NA chr3 45749627 45750651 + 1025 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-697K23.3 NA 0.047 70-80% NA NA Breast_cancer,CRC,Normal NA NA boxplot RP11-168K11.2 NA chr9 113570190 113590019 - 19830 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-168K11.2 NA 0.118 50-60% NA NA CRC,HCC,Normal NA NA boxplot FTH1P3 ferritin, heavy polypeptide 1 pseudogene 3 chr2 27392784 27393367 - 584 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FTH1P3 NA 0.906 70-80% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-76C10.3 NA chr12 131025561 131028060 - 2500 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-76C10.3 NA 0.047 60-70% NA NA Breast_cancer,CRC,PAAD NA NA boxplot AZU1P1 azurocidin 1 pseudogene 1 chr13 39856710 39857094 - 385 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AZU1P1 NA 0.012 70-80% NA NA PAAD NA NA boxplot RP3-514P16.1 NA chrX 101537485 101539276 - 1792 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-514P16.1 NA 0.282 50-60% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot RP1-267L14.3 NA chr12 112063909 112065755 + 1847 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-267L14.3 NA 0.024 70-80% Brain 4.906892038 HCC NA NA boxplot RP11-640L9.2 NA chr3 36823151 36825158 - 2008 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-640L9.2 NA 0.4 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot HTR5BP 5-hydroxytryptamine (serotonin) receptor 5B, pseudogene chr2 117859427 117934942 + 75516 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HTR5BP NA 0.024 90-100% Testis 1.424679768 Breast_cancer,CRC NA NA boxplot CTD-2616J11.2 NA chr19 51415724 51417425 + 1702 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2616J11.2 NA 0.529 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP1-122P22.4 NA chr20 19756390 19758037 - 1648 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-122P22.4 NA 0.294 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC007559.1 NA chr2 229701794 229702148 + 355 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC007559.1 NA 0.012 90-100% NA NA HCC NA NA boxplot RP3-461F17.1 NA chr12 7032108 7032398 + 291 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-461F17.1 NA 0.035 50-60% Testis 1.420718778 CRC NA NA boxplot RP11-666F17.1 NA chr12 26623369 26649479 + 26111 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-666F17.1 NA 0.024 10-20% NA NA Breast_cancer,CRC,Normal NA NA boxplot CTSLP2 cathepsin L pseudogene 2 chr10 47581211 47582321 - 1111 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTSLP2 NA 0.341 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC004057.1 NA chr4 113214046 113217170 - 3125 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC004057.1 NA 0.929 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(down) NA boxplot AC009133.24 NA chr16 29808679 29812227 + 3549 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC009133.24 NA 0.576 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP3-455J7.4 NA chr1 167627385 167630674 - 3290 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-455J7.4 NA 0.118 70-80% Spleen 1.52602629 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP1-39G22.4 NA chr1 40262672 40262984 - 313 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-39G22.4 NA 0.012 10-20% NA NA HCC NA NA boxplot RP11-336K24.12 NA chr1 155978799 155982986 + 4188 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-336K24.12 NA 0.235 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CTD-2528L19.6 NA chr19 37728586 37730643 - 2058 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2528L19.6 NA 0.282 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RPL7P6 ribosomal protein L7 pseudogene 6 chr12 19089151 19089888 + 738 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL7P6 NA 0.859 50-60% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-236B18.5 NA chr10 90997480 90997713 - 234 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-236B18.5 NA 0.2 70-80% Brain 3.458065272 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP1-168L15.6 NA chr6 166388136 166389920 + 1785 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-168L15.6 NA 0.012 50-60% NA NA Breast_cancer,CRC NA NA boxplot C21orf91-OT1 C21orf91 overlapping transcript 1 chr21 17763315 17792523 - 29209 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=C21orf91-OT1 NA 0.059 0-10% Testis 4.596434332 Breast_cancer,CHD,CRC,PAAD CHD(up) NA boxplot RP11-347D21.1 NA chr20 47950799 47952055 + 1257 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-347D21.1 NA 0.012 70-80% Testis 4.906892038 NA NA NA boxplot LINC01446 long intergenic non-protein coding RNA 1446 chr7 53655509 53811931 - 156423 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01446 NA 0.271 0-10% NA NA CRC,HCC,Normal,PAAD CRC(up),HCC(up) NA boxplot RP11-355N15.3 NA chr15 58454327 58454982 + 656 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-355N15.3 NA 0.094 70-80% NA NA CRC,HCC,Normal NA NA boxplot RP1-142L7.9 NA chr6 112217640 112219570 - 1931 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-142L7.9 NA 0.012 90-100% NA NA Breast_cancer,PAAD NA NA boxplot RP11-114N19.3 NA chr14 81107033 81170414 - 63382 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-114N19.3 exo_circ_045775,exo_circ_051415,exo_circ_042722,exo_circ_045774 0.659 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down) NA boxplot NDP-AS1 NDP antisense RNA 1 chrX 43949732 43969620 + 19889 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NDP-AS1 NA 0.012 10-20% Brain 4.906892038 Breast_cancer,HCC NA NA boxplot RP11-325I22.3 NA chr5 1383159 1386409 - 3251 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-325I22.3 NA 0.353 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot BNIP3P42 BCL2/adenovirus E1B 19kDa interacting protein 3 pseudogene 42 chr7 64551498 64552066 + 569 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=BNIP3P42 NA 0.012 80-90% NA NA Breast_cancer,HCC NA NA boxplot CTD-2116N20.1 NA chr5 65486444 65487048 - 605 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2116N20.1 NA 0.059 20-30% Testis 3.16224506 CRC,HCC,Normal,PAAD NA NA boxplot RP11-806H10.4 NA chr17 78360453 78373911 + 13459 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-806H10.4 NA 0.094 80-90% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot FTH1P11 ferritin, heavy polypeptide 1 pseudogene 11 chr8 81521682 81522232 - 551 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FTH1P11 NA 1 0-10% NA NA CHD,CRC,HCC,Normal,PAAD CRC(up) NA boxplot LINC01625 long intergenic non-protein coding RNA 1625 chr6 139468995 139474596 - 5602 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01625 NA 0.035 80-90% NA NA Normal,PAAD NA NA boxplot RP3-337H4.8 NA chr6 43588230 43591362 - 3133 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-337H4.8 NA 0.059 30-40% NA NA CRC,HCC,Normal NA NA boxplot RP11-183G22.1 NA chr1 50326131 50327007 + 877 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-183G22.1 NA 0.047 90-100% Testis 3.642033948 Breast_cancer,HCC,PAAD NA NA boxplot PRCAT47 prostate cancer-associated 47 chr16 80828735 80892595 - 63861 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PRCAT47 NA 0.459 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-433J22.2 NA chr1 147757185 147758434 + 1250 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-433J22.2 NA 0.447 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot LINC01355 long intergenic non-protein coding RNA 1355 chr1 23281309 23286752 - 5444 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01355 NA 0.259 10-20% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-43N5.1 NA chr12 67709047 67729475 - 20429 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-43N5.1 exo_circ_016889 0.012 60-70% NA NA Breast_cancer,PAAD NA NA boxplot RPL7P7 ribosomal protein L7 pseudogene 7 chr1 8786211 8786913 - 703 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL7P7 exo_circ_026210 0.071 50-60% NA NA CRC,Normal,PAAD NA NA boxplot CTD-3113P16.5 NA chr19 305573 306467 + 895 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-3113P16.5 NA 0.2 30-40% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot CTD-2589H19.6 NA chr5 675826 676616 + 791 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2589H19.6 NA 0.2 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD PAAD(up) NA boxplot RP3-425P12.5 NA chr6 25041839 25056664 + 14826 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-425P12.5 exo_circ_055183 0.094 70-80% NA NA CRC,HCC,Normal NA NA boxplot RNPS1P1 RNA binding protein S1, serine-rich domain pseudogene 1 chr4 11371975 11372892 + 918 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RNPS1P1 NA 0.988 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up),HCC(up) NA boxplot RP11-666O2.4 NA chr16 28599241 28601881 - 2641 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-666O2.4 NA 0.071 60-70% NA NA CRC,PAAD NA NA boxplot RP11-39C10.1 NA chr4 164188311 164190367 + 2057 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-39C10.1 NA 0.071 70-80% Fallopian Tube 4.486486935 Breast_cancer,HCC,Normal,PAAD NA NA boxplot AC010883.5 NA chr2 43229573 43233394 + 3822 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC010883.5 NA 0.365 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-164H5.1 NA chr9 124598707 124599580 - 874 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-164H5.1 exo_circ_055827,exo_circ_004488,exo_circ_028092 0.082 40-50% Testis 4.906892038 Breast_cancer,CRC,Normal,PAAD NA NA boxplot RP11-47J17.1 NA chr11 12848795 12849433 + 639 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-47J17.1 NA 0.024 30-40% NA NA PAAD NA NA boxplot RP11-361D14.2 NA chr4 144505900 144509001 + 3102 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-361D14.2 NA 0.012 20-30% Testis 4.906892038 Breast_cancer,HCC NA NA boxplot RP11-279N8.1 NA chr13 47825330 47835956 - 10627 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-279N8.1 NA 0.047 30-40% Testis 4.225174736 CRC,HCC,Normal NA NA boxplot RP11-35G9.3 NA chr18 57630302 57669296 + 38995 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-35G9.3 NA 0.906 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down) NA boxplot CTD-2201E18.5 NA chr5 43006733 43007543 - 811 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2201E18.5 NA 0.071 70-80% NA NA CRC,Normal,PAAD NA NA boxplot RP11-460M2.1 NA chr2 48809340 49419013 + 609674 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-460M2.1 NA 0.082 80-90% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CTC-359M8.3 NA chr5 146375591 146376219 - 629 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-359M8.3 NA 0.012 70-80% Testis 4.906892038 Breast_cancer,Normal NA NA boxplot RP11-20I20.2 NA chr4 1113639 1132977 + 19339 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-20I20.2 NA 0.106 40-50% Testis 2.784365841 HCC,Normal,PAAD NA NA boxplot CTC-471J1.10 NA chr19 52110318 52110726 - 409 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-471J1.10 NA 0.059 60-70% NA NA HCC,Normal,PAAD NA NA boxplot FAM35BP family with sequence similarity 35, member A pseudogene chr10 46610474 46652025 - 41552 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FAM35BP NA 0.965 10-20% NA NA CHD,CRC,HCC,Normal,PAAD CHD(down),HCC(up) NA boxplot RP11-693J15.4 NA chr12 92421531 92483680 + 62150 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-693J15.4 NA 0.871 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down),HCC(down),PAAD(down) NA boxplot RP11-326C3.13 NA chr11 325703 326294 - 592 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-326C3.13 NA 0.188 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CTB-43P18.1 NA chr5 139364677 139369717 - 5041 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTB-43P18.1 NA 0.412 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot ZNF815P zinc finger protein 815, pseudogene chr7 5823160 5854435 + 31276 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ZNF815P NA 0.824 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-405M12.3 NA chr18 75070197 75071091 - 895 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-405M12.3 NA 0.212 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot ADNP-AS1 ADNP antisense RNA 1 chr20 50930984 50945134 + 14151 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ADNP-AS1 NA 0.741 10-20% NA NA CRC,HCC,Normal,PAAD PAAD(up) NA boxplot RP11-285G1.2 NA chr10 44899614 44920220 - 20607 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-285G1.2 NA 0.024 80-90% Testis 3.301693542 Breast_cancer,CRC,Normal NA NA boxplot RP5-1061H20.4 NA chr1 229258281 229271028 - 12748 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-1061H20.4 NA 0.082 10-20% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP13-16H11.9 NA chr10 26664206 26697295 - 33090 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP13-16H11.9 NA 0.035 90-100% NA NA Normal NA NA boxplot RP11-2E11.9 NA chr7 130507660 130508282 + 623 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-2E11.9 NA 0.129 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-616M22.5 NA chr16 1257339 1258074 + 736 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-616M22.5 NA 0.012 70-80% NA NA NA NA NA boxplot RP11-381K20.2 NA chr5 137814333 137889336 - 75004 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-381K20.2 exo_circ_027688 0.624 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),PAAD(down) NA boxplot RP11-798L4.1 NA chr4 61420246 61428221 - 7976 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-798L4.1 NA 0.024 50-60% NA NA Breast_cancer,HCC,PAAD NA NA boxplot ITPKB-IT1 ITPKB intronic transcript 1 chr1 226656640 226675067 - 18428 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ITPKB-IT1 NA 0.565 10-20% NA NA CHD,CRC,HCC,Normal,PAAD CHD(up),CRC(down),HCC(down),PAAD(down) NA boxplot EIF1B-AS1 EIF1B antisense RNA 1 chr3 40173145 40309698 - 136554 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=EIF1B-AS1 exo_circ_036250,exo_circ_038590 0.894 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot SRP9P1 signal recognition particle 9 pseudogene 1 chr10 91807179 91807439 - 261 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SRP9P1 NA 1 0-10% NA NA CHD,CRC,HCC,Normal,PAAD CHD(up),CRC(up),PAAD(up) NA boxplot CLK3P2 CDC like kinase 3 pseudogene 2 chr1 247936061 247937513 - 1453 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CLK3P2 NA 0.424 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-129J12.1 NA chr10 99526948 99528467 + 1520 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-129J12.1 NA 0.059 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-302K17.4 NA chr10 102089968 102090062 + 95 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-302K17.4 NA 0.012 10-20% NA NA Normal NA NA boxplot RP11-207F8.1 NA chr6 85868953 85869464 + 512 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-207F8.1 exo_circ_027884 0.012 90-100% NA NA NA NA NA boxplot LURAP1L-AS1 LURAP1L antisense RNA 1 chr9 12700100 12814345 - 114246 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LURAP1L-AS1 NA 0.012 30-40% NA NA NA NA NA boxplot CTC-378H22.1 NA chr19 42132555 42137099 + 4545 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-378H22.1 NA 0.882 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot RP11-462P6.1 NA chr15 39300418 39310782 - 10365 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-462P6.1 NA 0.059 60-70% Testis 4.831233258 CRC,HCC,Normal NA NA boxplot CTA-363E6.3 NA chr16 19392213 19393468 - 1256 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTA-363E6.3 NA 0.012 90-100% NA NA Breast_cancer NA NA boxplot RP11-546J1.1 NA chr2 157877683 157878565 + 883 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-546J1.1 NA 0.012 60-70% NA NA CRC,Normal NA NA boxplot CTD-3220F14.2 NA chr19 37337236 37337743 + 508 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-3220F14.2 NA 0.082 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-158D2.2 NA chr9 84063443 84094577 + 31135 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-158D2.2 NA 0.047 90-100% Testis 4.639772612 Breast_cancer,Normal NA NA boxplot IFNG-AS1 IFNG antisense RNA 1 chr12 67989445 68234686 + 245242 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=IFNG-AS1 NA 0.6 10-20% Spleen 1.690938463 Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot AC012358.7 NA chr2 55214387 55216126 - 1740 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC012358.7 NA 0.047 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CTA-204B4.2 NA chr8 140505813 140508043 - 2231 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTA-204B4.2 exo_circ_019871,exo_circ_044735 0.341 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC007228.8 NA chr19 56613810 56613951 + 142 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC007228.8 NA 0.035 90-100% NA NA HCC,PAAD NA NA boxplot SETP2 SET pseudogene 2 chr14 51436038 51436963 + 926 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SETP2 NA 0.012 40-50% Uterus 3.113826045 Breast_cancer,HCC NA NA boxplot RP11-366L20.2 NA chr12 65851340 65882167 - 30828 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-366L20.2 NA 0.165 10-20% Ovary 1.178301481 Breast_cancer,CRC,HCC,Normal NA NA boxplot RP11-109D20.1 NA chr15 45041716 45058707 - 16992 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-109D20.1 NA 0.024 50-60% NA NA HCC,Normal NA NA boxplot RP11-84C10.2 NA chr14 20919361 20920299 + 939 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-84C10.2 NA 0.506 20-30% Whole Blood 2.363751948 CRC,HCC,Normal,PAAD CRC(up) NA boxplot RP11-932O9.8 NA chr15 30607695 30608193 - 499 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-932O9.8 NA 0.071 70-80% NA NA CRC,HCC NA NA boxplot CTD-2659N19.10 NA chr19 12796823 12801849 + 5027 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2659N19.10 NA 0.541 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CTB-12A17.2 NA chr19 46636810 46639161 - 2352 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTB-12A17.2 NA 0.024 80-90% NA NA Breast_cancer,CRC,Normal,PAAD NA NA boxplot RP11-620J15.3 NA chr12 57931528 57936175 - 4648 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-620J15.3 NA 0.906 0-10% Testis 1.318323468 CRC,HCC,Normal,PAAD CHD(down),PAAD(up) NA boxplot SDHDP2 succinate dehydrogenase complex subunit D, integral membrane protein pseudogene 2 chr7 135444461 135444925 + 465 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SDHDP2 NA 0.518 40-50% Testis 4.337640516 Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-151A6.6 NA chr13 100537365 100539567 + 2203 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-151A6.6 exo_circ_051157 0.047 30-40% NA NA CRC,PAAD NA NA boxplot RP11-108K3.2 NA chr15 51315841 51321996 + 6156 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-108K3.2 NA 0.024 40-50% Testis 4.035844273 Breast_cancer,PAAD NA NA boxplot RP6-65G23.5 NA chr14 70822004 70823984 + 1981 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP6-65G23.5 exo_circ_051390 0.094 50-60% NA NA HCC,Normal,PAAD NA NA boxplot AC007405.8 NA chr2 170816293 170818037 - 1745 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC007405.8 NA 0.024 70-80% NA NA Breast_cancer,HCC NA NA boxplot RP11-102N12.3 NA chr4 140756528 140757921 + 1394 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-102N12.3 NA 0.388 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot ZNF638-IT1 ZNF638 intronic transcript 1 chr2 71373938 71376320 + 2383 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ZNF638-IT1 NA 0.388 10-20% NA NA CRC,HCC,Normal,PAAD CRC(up),PAAD(up) NA boxplot RP11-180P8.1 NA chr17 62910690 62968549 - 57860 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-180P8.1 NA 0.024 0-10% NA NA Normal,PAAD NA NA boxplot RP4-789D17.5 NA chr1 35929720 35930115 - 396 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-789D17.5 NA 0.012 80-90% NA NA Normal NA NA boxplot RP11-33E12.2 NA chr1 85152487 85154203 - 1717 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-33E12.2 NA 0.118 30-40% NA NA CRC,HCC,Normal NA NA boxplot RP11-599J14.2 NA chr12 9398355 9414851 - 16497 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-599J14.2 NA 0.718 10-20% Testis 1.531053519 Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),PAAD(up) NA boxplot AC007191.4 NA chr19 45714387 45717381 - 2995 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC007191.4 NA 0.294 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-178H8.7 NA chr11 93726654 93729805 - 3152 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-178H8.7 NA 0.4 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC083843.2 NA chr8 134832747 134834482 + 1736 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC083843.2 NA 0.047 50-60% Testis 2.853458221 HCC,Normal NA NA boxplot TRMT112P1 tRNA methyltransferase 11-2 homolog (S. cerevisiae) pseudogene 1 chr4 116378919 116379269 + 351 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TRMT112P1 NA 0.082 80-90% NA NA HCC,Normal NA NA boxplot RP11-82H13.2 NA chr1 84244334 84244577 + 244 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-82H13.2 NA 0.035 80-90% NA NA CRC,HCC,PAAD NA NA boxplot CTD-2619J13.5 NA chr19 58350795 58351720 + 926 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2619J13.5 NA 0.106 70-80% NA NA Breast_cancer,CRC,Normal,PAAD NA NA boxplot AC017104.6 NA chr2 231388976 231394991 + 6016 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC017104.6 NA 0.565 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot PDSS1P1 prenyl (decaprenyl) diphosphate synthase, subunit 1 pseudogene 1 chr9 5084999 5086112 - 1114 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PDSS1P1 NA 0.047 80-90% NA NA Breast_cancer,CRC,Normal NA NA boxplot RP11-154H23.4 NA chr3 71581721 71628558 + 46838 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-154H23.4 NA 0.165 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot LINC00882 long intergenic non-protein coding RNA 882 chr3 106836811 107240641 - 403831 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00882 NA 0.094 50-60% Testis 1.036049528 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot HMGN1P28 high mobility group nucleosome binding domain 1 pseudogene 28 chr17 60851382 60851745 + 364 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HMGN1P28 NA 0.059 90-100% NA NA CRC,Normal NA NA boxplot MTCO3P17 MT-CO3 pseudogene 17 chr2 202616700 202617212 + 513 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MTCO3P17 NA 0.012 90-100% NA NA NA NA NA boxplot RP11-582E3.4 NA chr12 27121910 27147664 + 25755 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-582E3.4 NA 0.824 0-10% Testis 1.091330521 CRC,HCC,Normal,PAAD CHD(down),CRC(down),PAAD(up) NA boxplot RP11-588P8.1 NA chr4 100190033 100215505 + 25473 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-588P8.1 NA 0.012 80-90% Testis 4.677713772 HCC NA NA boxplot RP11-326C3.12 NA chr11 327171 330122 + 2952 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-326C3.12 NA 0.706 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),PAAD(down) NA boxplot AC005523.2 NA chr19 4791745 4795559 - 3815 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC005523.2 NA 0.624 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot CYP4F60P NA chr9 42950566 42951630 + 1065 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CYP4F60P NA 0.024 90-100% Testis 3.957884664 HCC,Normal,PAAD NA NA boxplot RP11-2B6.3 NA chr9 94166289 94200627 + 34339 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-2B6.3 NA 0.576 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-705C15.4 NA chr12 9647014 9648009 - 996 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-705C15.4 NA 0.035 90-100% Testis 4.902195162 HCC,Normal,PAAD NA NA boxplot CEACAMP3 carcinoembryonic antigen-related cell adhesion molecule pseudogene 3 chr19 41599735 41605984 + 6250 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CEACAMP3 NA 0.071 30-40% Whole Blood 2.446849094 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-778D9.13 NA chr3 184132942 184133561 - 620 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-778D9.13 NA 0.012 70-80% NA NA PAAD NA NA boxplot CTC-463A16.1 NA chr5 142165767 142168387 + 2621 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-463A16.1 NA 0.259 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-686D22.5 NA chr17 35400878 35403006 - 2129 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-686D22.5 NA 0.259 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-434H6.6 NA chr3 129123439 129124003 + 565 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-434H6.6 NA 0.329 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot Z83844.1 NA chr22 37641832 37658377 - 16546 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=Z83844.1 NA 0.565 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-98D18.15 NA chr1 151755541 151759911 + 4371 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-98D18.15 NA 0.059 70-80% Pituitary 3.528008419 HCC,Normal,PAAD NA NA boxplot LINC01285 long intergenic non-protein coding RNA 1285 chrX 118839554 118919669 + 80116 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01285 NA 0.035 30-40% NA NA Breast_cancer,HCC,Normal NA NA boxplot RP3-437C15.1 NA chr6 51410081 51410537 - 457 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-437C15.1 NA 0.882 20-30% NA NA CRC,HCC,Normal,PAAD CHD(down) NA boxplot CTD-3179P9.1 NA chr5 117925008 118266035 + 341028 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-3179P9.1 NA 0.235 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot HCG9 HLA complex group 9 (non-protein coding) chr6 29975112 29978410 + 3299 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HCG9 NA 0.082 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-158H5.2 NA chr18 35257040 35257512 + 473 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-158H5.2 NA 0.012 90-100% NA NA Breast_cancer,CRC NA NA boxplot RP3-468O1.6 NA chr20 34476205 34476787 + 583 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-468O1.6 NA 0.106 40-50% NA NA CRC,Normal NA NA boxplot Z84812.4 NA chr16 17514 35195 - 17682 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=Z84812.4 NA 0.588 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot OR5AW1P olfactory receptor family 5 subfamily AW member 1 pseudogene chrX 131341447 131342452 - 1006 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=OR5AW1P NA 0.012 50-60% NA NA NA NA NA boxplot CTD-2532D12.4 NA chr17 73737854 73756557 + 18704 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2532D12.4 NA 0.024 10-20% Spleen 3.300245935 Breast_cancer,HCC,Normal NA NA boxplot RP11-807H22.6 NA chr11 72172439 72178042 + 5604 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-807H22.6 NA 0.012 90-100% Spleen 2.660173768 Breast_cancer NA NA boxplot FLJ27354 uncharacterized LOC400761 chr1 89583241 89632894 - 49654 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FLJ27354 NA 0.8 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot LINC01063 long intergenic non-protein coding RNA 1063 chr3 196631498 196632587 - 1090 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01063 NA 0.553 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CTC-471C19.1 NA chr5 6019029 6022283 - 3255 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-471C19.1 NA 0.012 80-90% NA NA HCC NA NA boxplot RP11-158L12.5 NA chr12 125150058 125151394 + 1337 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-158L12.5 NA 0.012 20-30% Testis 4.906892038 NA NA NA boxplot AC104297.1 NA chr3 17871729 17872598 - 870 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC104297.1 NA 0.024 90-100% NA NA Normal NA NA boxplot RP11-213G2.3 NA chr9 85805359 85849542 + 44184 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-213G2.3 exo_circ_039477 0.929 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down) NA boxplot HSPE1P2 heat shock protein family E (Hsp10) member 1 pseudogene 2 chr14 63601509 63601814 + 306 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HSPE1P2 NA 0.576 50-60% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-876N24.1 NA chr16 10840384 10841544 - 1161 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-876N24.1 NA 0.435 20-30% Spleen 2.339468643 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP4-671G15.2 NA chr1 112517799 112518441 - 643 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-671G15.2 NA 0.024 20-30% NA NA HCC NA NA boxplot AZIN1-AS1 AZIN1 antisense RNA 1 chr8 102864300 102977876 + 113577 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AZIN1-AS1 NA 0.729 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down) NA boxplot RP11-114O18.1 NA chr1 120076616 120077091 + 476 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-114O18.1 NA 0.024 80-90% Testis 2.496389869 HCC,PAAD NA NA boxplot AC139887.4 NA chr4 764487 765074 - 588 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC139887.4 NA 0.165 80-90% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot GLIDR glioblastoma down-regulated RNA chr9 39807361 39810063 - 2703 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GLIDR NA 0.753 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down),CRC(down) NA boxplot RP11-457M11.6 NA chr6 26611903 26613109 - 1207 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-457M11.6 NA 0.012 10-20% Testis 4.906892038 Breast_cancer,HCC NA NA boxplot RP11-561N12.6 NA chr7 64566814 64567443 - 630 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-561N12.6 NA 0.012 60-70% NA NA HCC NA NA boxplot RP11-61K12.2 NA chr3 126973065 126976426 + 3362 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-61K12.2 NA 0.035 70-80% NA NA Breast_cancer,CRC,PAAD NA NA boxplot RP11-641J8.1 NA chrX 49165576 49165972 - 397 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-641J8.1 NA 0.247 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-666O2.2 NA chr16 28553709 28554140 - 432 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-666O2.2 NA 0.635 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot C2orf48 chromosome 2 open reading frame 48 chr2 10141382 10211725 + 70344 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=C2orf48 NA 0.2 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-585P4.5 NA chr12 75483454 75489820 - 6367 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-585P4.5 NA 0.494 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-156E8.1 NA chr1 244969350 244971088 - 1739 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-156E8.1 NA 0.353 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CTB-147C13.1 NA chr5 170483806 170486407 - 2602 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTB-147C13.1 NA 0.012 20-30% NA NA Breast_cancer,CRC NA NA boxplot CTD-2008P7.1 NA chr17 28263634 28266369 - 2736 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2008P7.1 NA 0.012 30-40% Testis 4.781500175 Breast_cancer,HCC NA NA boxplot MORF4L2-AS1 MORF4L2 antisense RNA 1 chrX 103687284 103691772 + 4489 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MORF4L2-AS1 NA 0.141 30-40% NA NA CRC,HCC,Normal NA NA boxplot RP11-274B21.2 NA chr7 128651185 128652334 + 1150 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-274B21.2 NA 0.847 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(up),PAAD(up) NA boxplot RP11-701H24.8 NA chr15 25041918 25042428 + 511 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-701H24.8 NA 0.224 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CTD-2063L20.1 NA chr11 29275655 29276565 + 911 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2063L20.1 NA 0.012 90-100% NA NA NA NA NA boxplot RP5-1007H16.1 NA chr7 7619872 7620543 + 672 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-1007H16.1 NA 0.047 60-70% NA NA HCC,Normal,PAAD NA NA boxplot LINC01258 long intergenic non-protein coding RNA 1258 chr4 38420662 38523180 - 102519 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01258 NA 0.024 80-90% NA NA Breast_cancer,CRC,HCC NA NA boxplot RP11-196G18.22 NA chr1 149844498 149849024 - 4527 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-196G18.22 NA 0.659 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(up) NA boxplot CTA-351J1.1 NA chr7 105819492 105820101 + 610 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTA-351J1.1 NA 0.071 80-90% Testis 4.525354385 Normal,PAAD NA NA boxplot RP11-79N23.1 NA chr6 53740749 53747022 - 6274 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-79N23.1 NA 0.071 40-50% NA NA CRC,Normal,PAAD NA NA boxplot RP11-567N4.2 NA chr4 75361207 75434449 - 73243 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-567N4.2 exo_circ_026393 0.035 80-90% Pituitary 4.906892038 HCC,Normal NA NA boxplot RP11-221N13.3 NA chr12 65602869 65612997 + 10129 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-221N13.3 NA 0.094 50-60% Testis 2.008463144 CRC,HCC,Normal,PAAD NA NA boxplot PRR29-AS1 PRR29 antisense RNA 1 chr17 63996071 63999899 - 3829 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PRR29-AS1 NA 0.271 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot SAMD12-AS1 SAMD12 antisense RNA 1 chr8 118621001 118858218 + 237218 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SAMD12-AS1 NA 0.094 70-80% NA NA HCC,Normal NA NA boxplot RP11-26F2.2 NA chr15 22756172 22756729 - 558 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-26F2.2 NA 0.012 40-50% NA NA Normal NA NA boxplot RP11-527N22.2 NA chr8 37405439 37406724 - 1286 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-527N22.2 NA 0.059 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-686D22.9 NA chr17 35477994 35478444 + 451 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-686D22.9 NA 0.224 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-475I24.9 NA chr9 42568865 42569315 + 451 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-475I24.9 NA 0.035 80-90% NA NA CRC,Normal NA NA boxplot EEF1DP3 eukaryotic translation elongation factor 1 delta pseudogene 3 chr13 31846841 31953472 + 106632 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=EEF1DP3 exo_circ_008516 0.953 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-108M9.6 NA chr1 16904339 16904776 - 438 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-108M9.6 NA 0.024 80-90% NA NA CRC NA NA boxplot RP11-589P10.7 NA chr17 6985494 7019414 - 33921 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-589P10.7 NA 0.365 80-90% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-351I24.1 NA chr11 10302657 10303704 - 1048 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-351I24.1 NA 0.118 70-80% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CTC-1337H24.4 NA chr11 67374416 67374932 + 517 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-1337H24.4 NA 0.024 50-60% NA NA Breast_cancer,PAAD NA NA boxplot RP11-367H5.8 NA chr10 70198988 70199239 - 252 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-367H5.8 NA 0.047 20-30% Brain 4.906892038 CRC,PAAD NA NA boxplot RP11-968A15.2 NA chr12 54262615 54279063 + 16449 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-968A15.2 NA 0.024 90-100% NA NA HCC NA NA boxplot CTD-2293H3.2 NA chr19 37075113 37078605 - 3493 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2293H3.2 NA 0.012 80-90% NA NA Breast_cancer,Normal NA NA boxplot NOP56P1 NOP56 ribonucleoprotein pseudogene 1 chr6 28783633 28784004 - 372 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NOP56P1 NA 0.071 90-100% NA NA Breast_cancer,HCC,Normal NA NA boxplot RP11-366M4.11 NA chr4 164968587 164970002 - 1416 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-366M4.11 NA 0.812 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-752L20.3 NA chr4 147487971 147496062 + 8092 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-752L20.3 NA 0.059 20-30% NA NA Breast_cancer,Normal,PAAD NA NA boxplot OR7H2P olfactory receptor family 7 subfamily H member 2 pseudogene chr5 101816475 101816780 - 306 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=OR7H2P NA 0.012 80-90% NA NA NA NA NA boxplot CTD-2547L24.3 NA chr14 91242759 91252211 + 9453 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2547L24.3 NA 0.859 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down) NA boxplot RP11-712C19.1 NA chr14 64361392 64361637 + 246 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-712C19.1 NA 0.012 40-50% NA NA Breast_cancer,Normal NA NA boxplot RP1-125I3.2 NA chr1 25859613 25863420 + 3808 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-125I3.2 NA 0.471 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-771K4.3 NA chr12 31443792 31444208 - 417 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-771K4.3 NA 0.035 20-30% NA NA HCC,Normal,PAAD NA NA boxplot RP3-426I6.6 NA chr1 27819983 27820341 + 359 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-426I6.6 NA 0.071 70-80% NA NA CRC,Normal,PAAD NA NA boxplot CTD-2373H9.3 NA chr17 78897264 78900152 + 2889 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2373H9.3 NA 0.035 60-70% NA NA Breast_cancer,CRC,Normal,PAAD NA NA boxplot CTA-397H3.3 NA chr8 56074592 56075274 + 683 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTA-397H3.3 NA 0.024 20-30% Testis 4.906892038 CRC,PAAD NA NA boxplot RP11-685M7.3 NA chr11 10809297 10822931 + 13635 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-685M7.3 NA 0.294 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CICP4 capicua transcriptional repressor pseudogene 4 chr20 64290187 64292998 - 2812 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CICP4 NA 0.035 60-70% NA NA Breast_cancer,HCC,Normal NA NA boxplot CTD-2383M3.1 NA chr11 100684162 100687955 - 3794 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2383M3.1 NA 0.024 80-90% NA NA HCC,Normal NA NA boxplot CTC-228N24.2 NA chr5 127838486 127857804 - 19319 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-228N24.2 NA 0.012 90-100% NA NA Normal NA NA boxplot RP11-106E7.1 NA chr6 144397959 144398752 + 794 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-106E7.1 exo_circ_004106,exo_circ_049736 0.071 50-60% NA NA Breast_cancer,CRC,Normal NA NA boxplot U52111.14 NA chrX 153735626 153766478 - 30853 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=U52111.14 NA 0.376 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC016629.7 NA chr19 58586158 58586356 + 199 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC016629.7 NA 0.235 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-334C17.6 NA chr17 80149627 80149798 + 172 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-334C17.6 NA 0.047 70-80% NA NA CRC,HCC NA NA boxplot RP11-778D9.12 NA chr3 184134019 184135238 - 1220 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-778D9.12 NA 0.071 60-70% NA NA CRC,Normal,PAAD NA NA boxplot CTD-2542C24.5 NA chr19 20926777 20928714 - 1938 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2542C24.5 NA 0.012 10-20% NA NA Breast_cancer,Normal NA NA boxplot RP5-1160K1.8 NA chr1 109539906 109543837 - 3932 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-1160K1.8 NA 0.012 30-40% NA NA Breast_cancer,PAAD NA NA boxplot RP11-642A1.2 NA chr8 140572142 140572812 - 671 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-642A1.2 NA 0.247 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-129K12.1 NA chr3 36973117 36973672 - 556 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-129K12.1 NA 0.024 50-60% NA NA CRC,PAAD NA NA boxplot RP11-484K9.4 NA chr3 112990447 112991153 - 707 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-484K9.4 NA 0.106 70-80% NA NA CRC,HCC,PAAD NA NA boxplot RP4-800G7.1 NA chr7 149191043 149191223 - 181 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-800G7.1 NA 0.129 80-90% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-404I7.1 NA chr4 132985510 132988677 - 3168 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-404I7.1 NA 0.012 90-100% Testis 4.906892038 NA NA NA boxplot CTD-2033A16.1 NA chr16 69709874 69710583 + 710 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2033A16.1 NA 0.118 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-151M7.1 NA chr6 127632958 127635321 - 2364 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-151M7.1 NA 0.012 90-100% NA NA CRC NA NA boxplot C9orf163 chromosome 9 open reading frame 163 chr9 136483495 136486067 + 2573 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=C9orf163 NA 0.035 90-100% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot RP3-414A15.2 NA chr14 73522878 73530610 + 7733 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-414A15.2 NA 0.059 50-60% NA NA CRC,HCC,Normal NA NA boxplot RP11-271C24.3 NA chr3 113740823 113741254 - 432 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-271C24.3 exo_circ_038449,exo_circ_048870 0.047 40-50% NA NA CRC,Normal NA NA boxplot PTGES3P3 prostaglandin E synthase 3 (cytosolic) pseudogene 3 chr4 169791221 169791702 - 482 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PTGES3P3 NA 0.047 90-100% NA NA CHD,HCC,Normal,PAAD NA NA boxplot RP11-351M8.1 NA chr15 80896191 80909777 - 13587 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-351M8.1 NA 0.106 40-50% NA NA CRC,Normal,PAAD NA NA boxplot RP11-91G21.1 NA chr3 143000907 143001467 - 561 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-91G21.1 NA 0.129 60-70% Pituitary 1.592868532 CRC,HCC,Normal NA NA boxplot RP11-408B11.2 NA chr12 85318060 85342912 + 24853 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-408B11.2 NA 0.047 60-70% Prostate 4.906892038 Normal,PAAD NA NA boxplot RP11-767I20.1 NA chr12 58565960 58781747 - 215788 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-767I20.1 NA 0.212 30-40% Testis 1.812911447 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP4-591B8.3 NA chr1 114353986 114355178 + 1193 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-591B8.3 NA 0.012 60-70% NA NA CRC NA NA boxplot CDC42P4 cell division cycle 42 pseudogene 4 chr4 109555170 109555732 + 563 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CDC42P4 NA 0.012 80-90% NA NA Breast_cancer NA NA boxplot AC006460.2 NA chr2 190676944 190708716 - 31773 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC006460.2 exo_circ_003376,exo_circ_030914 0.212 10-20% Testis 1.624731845 CRC,HCC,Normal,PAAD NA NA boxplot RPL38P4 ribosomal protein L38 pseudogene 4 chr3 98525061 98525274 - 214 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL38P4 NA 0.047 50-60% Brain 4.906892038 CRC,HCC,PAAD NA NA boxplot CCDC183-AS1 CCDC183 antisense RNA 1 chr9 136803927 136808848 - 4922 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CCDC183-AS1 NA 0.447 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC013271.3 NA chr2 109936342 109968577 + 32236 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC013271.3 NA 0.565 20-30% Testis 2.139854957 CRC,HCC,Normal,PAAD NA NA boxplot SDHCP4 succinate dehydrogenase complex subunit C pseudogene 4 chr11 17435672 17436181 - 510 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SDHCP4 NA 0.024 70-80% NA NA HCC,Normal NA NA boxplot AC016735.1 NA chr2 43001355 43006060 - 4706 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC016735.1 NA 0.059 20-30% NA NA HCC,Normal,PAAD NA NA boxplot RP11-40E6.2 NA chr13 109805317 109805868 + 552 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-40E6.2 exo_circ_045564 0.035 90-100% NA NA CRC,Normal,PAAD NA NA boxplot AC009403.2 NA chr7 155611231 155645205 - 33975 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC009403.2 NA 0.894 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down) NA boxplot RP11-806L2.6 NA chr18 706523 707648 + 1126 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-806L2.6 NA 0.012 90-100% NA NA CRC NA NA boxplot RP11-259O18.5 NA chr12 8858143 8915276 - 57134 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-259O18.5 NA 0.071 70-80% NA NA CRC,Normal NA NA boxplot RP11-293A21.2 NA chr4 26873561 26874349 - 789 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-293A21.2 NA 0.024 70-80% NA NA Breast_cancer,CRC,Normal NA NA boxplot CTD-2313J23.1 NA chr16 24472798 24495177 - 22380 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2313J23.1 NA 0.012 90-100% Testis 4.906892038 Breast_cancer,CRC,HCC NA NA boxplot AP000230.1 NA chr21 26170871 26217381 + 46511 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AP000230.1 NA 0.153 60-70% Brain 1.808798027 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot KLF8P1 Kruppel-like factor 8 pseudogene 1 chr16 48718083 48719143 + 1061 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KLF8P1 NA 0.012 40-50% NA NA NA NA NA boxplot NAP1L4P3 nucleosome assembly protein 1-like 4 pseudogene 3 chr13 47763460 47764606 + 1147 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NAP1L4P3 NA 0.788 60-70% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP1-286D6.5 NA chr1 3785008 3785538 + 531 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-286D6.5 NA 0.129 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CROCCP3 ciliary rootlet coiled-coil, rootletin pseudogene 3 chr1 16467436 16499257 - 31822 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CROCCP3 NA 0.741 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up),HCC(down) NA boxplot CKS1BP7 CDC28 protein kinase regulatory subunit 1B pseudogene 7 chr8 80644939 80645173 - 235 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CKS1BP7 NA 0.176 30-40% NA NA CHD,CRC,HCC,Normal NA NA boxplot AC008074.3 NA chr2 64395220 64453798 - 58579 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC008074.3 NA 0.259 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CTD-2655K5.1 NA chr11 68122053 68130518 + 8466 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2655K5.1 NA 0.024 60-70% Testis 3.364219451 Normal,PAAD NA NA boxplot RP11-449P15.2 NA chr7 879790 886547 - 6758 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-449P15.2 NA 0.353 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot SNHG4 small nucleolar RNA host gene 4 chr5 139274102 139283244 + 9143 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SNHG4 exo_circ_015081 0.859 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),PAAD(up) NA boxplot RP11-674N23.4 NA chr18 8801656 8802305 + 650 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-674N23.4 NA 0.035 10-20% NA NA HCC,Normal,PAAD NA NA boxplot RP6-91H8.2 NA chr14 71181456 71182106 + 651 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP6-91H8.2 NA 0.012 70-80% Testis 4.823862009 Breast_cancer,Normal NA NA boxplot RP11-16C18.3 NA chr6 89560875 89567044 - 6170 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-16C18.3 NA 0.082 60-70% Testis 4.111453047 Breast_cancer,HCC,Normal,PAAD NA NA boxplot YTHDF3-AS1 YTHDF3 antisense RNA 1 (head to head) chr8 63167725 63168442 - 718 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=YTHDF3-AS1 NA 0.329 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CTD-2587M23.1 NA chr5 1725149 1728172 + 3024 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2587M23.1 NA 0.012 10-20% Testis 4.301808974 Breast_cancer,CRC NA NA boxplot EIF3LP2 eukaryotic translation initiation factor 3 subunit L pseudogene 2 chr10 42566677 42567483 + 807 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=EIF3LP2 NA 0.224 90-100% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CTD-2138O14.1 NA chr5 23980587 23980938 + 352 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2138O14.1 NA 0.118 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CTC-539A10.7 NA chr19 10598001 10598965 - 965 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-539A10.7 NA 0.012 40-50% Testis 4.393656378 Breast_cancer,Normal NA NA boxplot RP11-229E13.4 NA chr17 41867581 41867736 + 156 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-229E13.4 NA 0.153 70-80% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RTCA-AS1 RTCA antisense RNA 1 chr1 100264009 100266120 - 2112 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RTCA-AS1 NA 0.847 0-10% NA NA CHD,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-572M11.1 NA chr3 113050912 113063443 - 12532 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-572M11.1 NA 0.012 20-30% NA NA Normal NA NA boxplot RP11-736K20.4 NA chr11 86908990 86912238 - 3249 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-736K20.4 NA 0.6 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down) NA boxplot RP11-335I12.2 NA chr12 66251745 66257434 - 5690 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-335I12.2 NA 0.2 10-20% Testis 2.646084295 CRC,HCC,Normal CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot CTD-2339L15.3 NA chr15 40642933 40646857 + 3925 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2339L15.3 NA 0.024 50-60% Testis 4.906892038 HCC,Normal NA NA boxplot AC009961.2 NA chr2 159689217 159690291 - 1075 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC009961.2 NA 0.035 70-80% NA NA CRC,Normal NA NA boxplot RP11-647F2.2 NA chr17 74307210 74309790 - 2581 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-647F2.2 NA 0.129 30-40% NA NA CRC,HCC,PAAD NA NA boxplot RP11-227D2.3 NA chr20 21397818 21400391 + 2574 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-227D2.3 NA 0.012 90-100% Testis 4.648227551 NA NA NA boxplot RP11-30K9.4 NA chr15 58815272 58817728 + 2457 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-30K9.4 NA 0.012 50-60% NA NA Normal NA NA boxplot AC009948.7 NA chr2 178454716 178455428 + 713 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC009948.7 NA 0.176 80-90% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot LBX2-AS1 LBX2 antisense RNA 1 chr2 74502595 74504678 + 2084 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LBX2-AS1 NA 0.906 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down),CRC(down) NA boxplot AP000857.2 NA chr11 84997226 84997768 - 543 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AP000857.2 NA 0.024 90-100% NA NA CRC NA NA boxplot RP11-731C17.1 NA chr3 136808551 136809623 - 1073 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-731C17.1 NA 0.047 60-70% NA NA CRC,Normal NA NA boxplot AC007016.3 NA chr4 15492729 15492972 - 244 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC007016.3 NA 0.012 70-80% NA NA CRC,Normal NA NA boxplot RP11-299L17.1 NA chr14 81332961 81333361 - 401 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-299L17.1 exo_circ_012703 0.094 10-20% Testis 4.906892038 CRC,HCC,Normal,PAAD NA NA boxplot RP11-629E24.2 NA chr13 30022021 30023800 - 1780 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-629E24.2 NA 0.012 70-80% NA NA Breast_cancer,HCC NA NA boxplot RP11-283G6.5 NA chr12 26230819 26319720 - 88902 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-283G6.5 NA 0.106 20-30% NA NA CRC,HCC,Normal NA NA boxplot RP11-293M10.1 NA chr14 75238616 75269283 - 30668 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-293M10.1 NA 0.012 40-50% Skin 3.643199449 PAAD NA NA boxplot RP11-1H8.4 NA chr15 34555870 34556820 + 951 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1H8.4 NA 0.012 80-90% Brain 4.906892038 Breast_cancer,HCC NA NA boxplot FTH1P7 ferritin, heavy polypeptide 1 pseudogene 7 chr13 22696023 22696574 - 552 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FTH1P7 NA 1 0-10% NA NA CHD,CRC,HCC,Normal,PAAD CRC(up),HCC(up) NA boxplot CICP16 capicua transcriptional repressor pseudogene 16 chr4 118635970 118638782 - 2813 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CICP16 NA 0.035 20-30% NA NA Breast_cancer,Normal NA NA boxplot CTD-2240H23.2 NA chr14 95185117 95185854 - 738 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2240H23.2 NA 0.259 50-60% NA NA CRC,Normal,PAAD NA NA boxplot MIR122 microRNA 122 chr18 58451080 58451152 - 73 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MIR122 NA 0.024 20-30% NA NA Breast_cancer,CRC,Normal NA NA boxplot RP11-529E10.7 NA chr4 3544555 3548796 + 4242 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-529E10.7 NA 0.024 70-80% Testis 3.766142825 Breast_cancer,HCC,Normal NA NA boxplot GNRHR2 gonadotropin releasing hormone receptor 2 (pseudogene) chr1 145919013 145925341 + 6329 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GNRHR2 NA 0.612 40-50% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-129M16.4 NA chr10 117267116 117268668 - 1553 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-129M16.4 exo_circ_021000 0.435 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-44N21.2 NA chr14 105112690 105112863 - 174 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-44N21.2 NA 0.024 80-90% NA NA HCC NA NA boxplot SLC25A25-AS1 SLC25A25 antisense RNA 1 chr9 128108581 128118693 - 10113 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SLC25A25-AS1 NA 0.612 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-71L14.4 NA chr16 68450283 68452318 + 2036 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-71L14.4 NA 0.024 80-90% NA NA Normal NA NA boxplot RP13-415G19.2 NA chr17 41665566 41668031 + 2466 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP13-415G19.2 NA 0.012 90-100% NA NA Breast_cancer,CRC,PAAD NA NA boxplot SNHG6 small nucleolar RNA host gene 6 chr8 66921684 66926398 - 4715 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SNHG6 NA 1 0-10% NA NA CHD,CRC,HCC,Normal,PAAD CHD(down) NA boxplot LA16c-381G6.1 NA chr16 1111627 1113399 + 1773 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LA16c-381G6.1 NA 0.012 80-90% NA NA Breast_cancer,PAAD NA NA boxplot CTB-58E17.9 NA chr17 38715328 38720272 - 4945 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTB-58E17.9 NA 0.365 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-742D12.2 NA chr18 46756487 46764408 + 7922 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-742D12.2 NA 0.082 70-80% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RPL23AP18 ribosomal protein L23a pseudogene 18 chr1 212309051 212309518 - 468 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL23AP18 NA 0.035 10-20% NA NA CRC,Normal,PAAD NA NA boxplot RP11-443F16.1 NA chr2 62939916 62940282 + 367 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-443F16.1 NA 0.012 10-20% Nerve 3.61172735 NA NA NA boxplot RP11-1221G12.2 NA chr9 65865190 65877274 - 12085 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1221G12.2 NA 0.118 70-80% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-285E18.2 NA chr13 74434538 74555515 + 120978 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-285E18.2 NA 0.059 50-60% NA NA CRC,Normal,PAAD NA NA boxplot ZSCAN12P1 zinc finger and SCAN domain containing 12 pseudogene 1 chr6 28091154 28093664 + 2511 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ZSCAN12P1 NA 0.141 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot EIF3EP1 eukaryotic translation initiation factor 3 subunit E pseudogene 1 chr6 73291962 73293277 + 1316 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=EIF3EP1 NA 0.282 10-20% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RPL41P1 ribosomal protein L41 pseudogene 1 chr20 21755270 21755350 + 81 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL41P1 NA 1 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down),CRC(down) NA boxplot RP11-560G2.1 NA chr12 75234740 75298508 + 63769 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-560G2.1 NA 0.012 20-30% Testis 4.817123018 PAAD NA NA boxplot AC091962.3 NA chr5 153887428 153898987 - 11560 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC091962.3 NA 0.024 70-80% Testis 4.906892038 HCC NA NA boxplot CH17-258A22.4 NA chr17 38078262 38124770 + 46509 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CH17-258A22.4 NA 0.894 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(up),HCC(up),PAAD(up) NA boxplot CDC14C cell division cycle 14C chr7 48919765 48926013 + 6249 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CDC14C NA 0.929 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down) NA boxplot AC005578.3 NA chr19 4246339 4247358 - 1020 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC005578.3 NA 0.059 60-70% NA NA HCC,Normal,PAAD NA NA boxplot SOX2-OT SOX2 overlapping transcript chr3 180989770 181836880 + 847111 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SOX2-OT NA 0.235 20-30% Brain 3.561191917 Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-68I18.10 NA chr1 151130075 151131610 - 1536 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-68I18.10 NA 0.024 50-60% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot RP11-329B9.3 NA chr3 184741937 184742462 + 526 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-329B9.3 NA 0.024 80-90% NA NA Breast_cancer,HCC NA NA boxplot MIPEPP1 mitochondrial intermediate peptidase pseudogene 1 chr7 112735166 112738693 - 3528 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MIPEPP1 NA 0.012 20-30% NA NA CRC NA NA boxplot LINC00968 long intergenic non-protein coding RNA 968 chr8 56496246 56559823 - 63578 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00968 NA 0.388 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-930P14.2 NA chr8 41828165 41829934 - 1770 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-930P14.2 NA 0.235 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot TPSP2 tryptase pseudogene 2 chr16 1286351 1288837 - 2487 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TPSP2 NA 0.012 90-100% Pituitary 3.140342872 Breast_cancer NA NA boxplot RP11-69E11.4 NA chr1 39522280 39546187 - 23908 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-69E11.4 NA 0.365 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-22C11.2 NA chr8 94637285 94639467 - 2183 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-22C11.2 NA 0.024 30-40% NA NA Breast_cancer,HCC NA NA boxplot SIGLEC20P sialic acid binding Ig-like lectin 20, pseudogene chr19 51184905 51190809 + 5905 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SIGLEC20P NA 0.129 20-30% Testis 4.617042482 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot MTCO3P29 MT-CO3 pseudogene 29 chr9 92109013 92110095 + 1083 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MTCO3P29 NA 0.012 0-10% NA NA Normal NA NA boxplot SLC7A11-AS1 SLC7A11 antisense RNA 1 chr4 138057464 138178177 + 120714 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SLC7A11-AS1 NA 0.082 60-70% Testis 3.74619391 Breast_cancer,HCC,Normal,PAAD NA NA boxplot RP11-217B1.2 NA chr15 89335053 89336161 + 1109 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-217B1.2 NA 0.082 70-80% Testis 3.308518201 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot HNRNPA1P35 heterogeneous nuclear ribonucleoprotein A1 pseudogene 35 chr2 201063089 201064051 + 963 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HNRNPA1P35 NA 1 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up),CRC(up),HCC(up),PAAD(up) NA boxplot AC004019.13 NA chr22 17580157 17589192 - 9036 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC004019.13 NA 0.047 60-70% Liver 1.24503451 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot SNHG22 small nucleolar RNA host gene 22 chr18 49814023 49851059 + 37037 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SNHG22 NA 0.682 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CRC(up) NA boxplot RP11-3B12.4 NA chr7 125159974 125160547 - 574 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-3B12.4 NA 0.012 90-100% Adrenal Gland 1.234029321 Normal NA NA boxplot AC002550.5 NA chr16 19706351 19715383 + 9033 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC002550.5 NA 0.271 10-20% Fallopian Tube 4.906892038 HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot RP5-1160K1.6 NA chr1 109628417 109630305 - 1889 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-1160K1.6 NA 0.341 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-734K21.5 NA chr2 9106593 9109865 + 3273 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-734K21.5 NA 0.012 60-70% NA NA Breast_cancer,PAAD NA NA boxplot CTB-180A7.3 NA chr19 6343761 6362149 - 18389 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTB-180A7.3 NA 0.082 70-80% Testis 3.746567163 CRC,Normal,PAAD NA NA boxplot AC008132.13 NA chr22 18846811 18861049 + 14239 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC008132.13 NA 0.024 90-100% Testis 4.758500063 Breast_cancer,CRC,Normal,PAAD NA NA boxplot RP13-395E19.4 NA chr15 32250302 32256125 - 5824 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP13-395E19.4 NA 0.024 30-40% NA NA Normal NA NA boxplot CTD-2154I11.2 NA chr5 95701249 95732295 - 31047 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2154I11.2 NA 0.294 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot LINC00922 long intergenic non-protein coding RNA 922 chr16 65284499 65576300 - 291802 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00922 NA 0.024 30-40% NA NA Breast_cancer,CHD,HCC NA NA boxplot RP11-250B2.5 NA chr6 80466958 80469080 + 2123 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-250B2.5 NA 0.035 60-70% NA NA CRC,Normal NA NA boxplot ACTBP13 actin, beta pseudogene 13 chr3 49873347 49877980 - 4634 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ACTBP13 NA 0.012 90-100% Testis 4.374374395 Breast_cancer NA NA boxplot RP11-631M21.1 NA chr10 14061 16544 - 2484 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-631M21.1 NA 0.153 60-70% NA NA CRC,HCC,PAAD NA NA boxplot RCC2P7 regulator of chromosome condensation 2 pseudogene 7 chr6 56431950 56433213 - 1264 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RCC2P7 NA 0.035 20-30% Testis 3.245523826 Breast_cancer,PAAD NA NA boxplot RP11-714G18.1 NA chr4 185370725 185390928 + 20204 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-714G18.1 NA 0.047 80-90% NA NA CRC,PAAD NA NA boxplot RBBP8P1 retinoblastoma binding protein 8 pseudogene 1 chrX 118632375 118634218 - 1844 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RBBP8P1 NA 0.012 80-90% Testis 2.278974802 Breast_cancer,CRC,Normal NA NA boxplot LINC01094 long intergenic non-protein coding RNA 1094 chr4 78645903 78682699 + 36797 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01094 NA 0.847 0-10% NA NA CHD,CRC,HCC,Normal,PAAD CHD(down),CRC(down),PAAD(down) NA boxplot RP11-561I11.4 NA chr1 242147514 242209129 + 61616 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-561I11.4 NA 0.153 30-40% Brain 3.848603101 CRC,HCC,Normal,PAAD NA NA boxplot AC005224.2 NA chr17 14210488 14217922 + 7435 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC005224.2 NA 0.212 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC006273.5 NA chr19 782755 785080 + 2326 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC006273.5 NA 0.094 30-40% NA NA CRC,Normal,PAAD NA NA boxplot RP11-513D5.5 NA chr8 38275888 38276680 + 793 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-513D5.5 NA 0.141 80-90% NA NA CRC,HCC,Normal,PAAD NA NA boxplot NPM1P6 nucleophosmin 1 (nucleolar phosphoprotein B23, numatrin) pseudogene 6 chr8 61202350 61203220 + 871 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NPM1P6 NA 0.976 10-20% NA NA CHD,CRC,HCC,Normal,PAAD CRC(down),HCC(up),PAAD(down) NA boxplot LINC01011 long intergenic non-protein coding RNA 1011 chr6 2987967 2991173 + 3207 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01011 NA 0.976 0-10% NA NA CHD,CRC,HCC,Normal,PAAD CHD(down) NA boxplot PTMAP4 prothymosin, alpha pseudogene 4 chr12 9239986 9240331 - 346 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PTMAP4 NA 1 0-10% NA NA CHD,CRC,HCC,Normal,PAAD CHD(up) NA boxplot RP4-592A1.2 NA chr1 58630841 58631530 - 690 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-592A1.2 NA 0.929 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),PAAD(down) NA boxplot AC102953.6 NA chr7 1508655 1509427 - 773 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC102953.6 NA 0.012 90-100% NA NA Breast_cancer NA NA boxplot CTB-13L3.1 NA chr7 90403434 90513391 + 109958 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTB-13L3.1 NA 0.035 70-80% NA NA Normal NA NA boxplot RP11-60A24.3 NA chr17 57771946 57834749 - 62804 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-60A24.3 NA 0.035 80-90% NA NA HCC,Normal NA NA boxplot CTD-2377D24.6 NA chr17 48646923 48707346 + 60424 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2377D24.6 NA 0.447 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-893F2.13 NA chr17 50158333 50161276 - 2944 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-893F2.13 NA 0.012 80-90% Testis 1.131873758 PAAD NA NA boxplot RP11-103J17.2 NA chr4 37001816 37020708 + 18893 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-103J17.2 NA 0.024 60-70% Testis 3.612843703 PAAD NA NA boxplot MPRIPP1 myosin phosphatase Rho interacting protein pseudogene 1 chr3 44579938 44581026 - 1089 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MPRIPP1 NA 0.871 20-30% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up) NA boxplot AC002115.9 NA chr19 35608285 35612666 - 4382 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC002115.9 NA 0.012 70-80% Testis 4.906892038 CRC,Normal NA NA boxplot RP11-494H4.3 NA chr3 179804063 179804366 + 304 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-494H4.3 NA 0.012 90-100% NA NA NA NA NA boxplot RP1-178F15.4 NA chr1 153631438 153634397 - 2960 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-178F15.4 NA 0.353 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot GVINP2 GTPase, very large interferon inducible pseudogene 2 chr11 6748131 6750324 + 2194 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GVINP2 NA 0.106 0-10% Spleen 3.939392712 CRC,HCC,Normal,PAAD NA NA boxplot RP11-378J18.6 NA chr1 222641414 222641858 - 445 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-378J18.6 NA 0.012 90-100% NA NA Breast_cancer,HCC,Normal NA NA boxplot AL772307.1 NA chr9 39983821 39984401 - 581 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AL772307.1 NA 0.153 80-90% NA NA CRC,HCC,Normal,PAAD NA NA boxplot AP001065.15 NA chr21 44485577 44490288 + 4712 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AP001065.15 NA 0.035 70-80% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot RP6-65G23.3 NA chr14 70810205 70815403 + 5199 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP6-65G23.3 NA 0.235 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP1-266L20.4 NA chr6 169725504 169738992 + 13489 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-266L20.4 NA 0.071 70-80% Testis 4.289225077 CRC,Normal,PAAD NA NA boxplot PLGLA plasminogen-like A (pseudogene) chr2 106382171 106393031 + 10861 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PLGLA NA 0.024 50-60% Liver 4.034639245 CHD,CRC,HCC NA NA boxplot RP11-514P8.2 NA chr7 102426818 102434780 - 7963 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-514P8.2 NA 0.2 70-80% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot RP11-105N14.1 NA chr2 213152970 213153659 + 690 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-105N14.1 NA 0.118 40-50% NA NA CRC,HCC,Normal NA NA boxplot RP11-207C16.4 NA chr9 5719021 5720244 - 1224 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-207C16.4 exo_circ_050442 0.165 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot HNRNPA3P14 heterogeneous nuclear ribonucleoprotein A3 pseudogene 14 chr1 81426456 81427605 + 1150 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HNRNPA3P14 NA 0.071 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC068286.1 NA chr2 14886647 14907664 - 21018 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC068286.1 exo_circ_043384,exo_circ_041412,exo_circ_012823,exo_circ_043385 0.035 40-50% Testis 4.906892038 HCC,Normal NA NA boxplot RP11-839G9.1 NA chr18 54885866 54898083 - 12218 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-839G9.1 exo_circ_057782 0.624 10-20% Testis 4.861331862 Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot AC019185.4 NA chr2 208469850 208540413 + 70564 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC019185.4 exo_circ_048621 0.012 80-90% Testis 4.906892038 CRC NA NA boxplot NAT8B N-acetyltransferase 8B (GCN5-related, putative, gene/pseudogene) chr2 73700576 73701340 - 765 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NAT8B NA 0.753 0-10% NA NA CHD,CRC,HCC,Normal,PAAD PAAD(down) NA boxplot AC007792.1 NA chr19 3355554 3355955 - 402 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC007792.1 NA 0.024 80-90% NA NA CRC NA NA boxplot AP001625.5 NA chr21 42508624 42509661 + 1038 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AP001625.5 NA 0.012 90-100% Testis 4.906892038 HCC NA NA boxplot RP3-417G15.1 NA chrX 133670971 133671386 + 416 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-417G15.1 NA 0.929 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down) NA boxplot LINC01001 long intergenic non-protein coding RNA 1001 chr11 127204 139612 - 12409 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01001 NA 0.565 30-40% NA NA CHD,CRC,HCC,Normal,PAAD CRC(up) NA boxplot RP11-121A8.1 NA chr7 38326070 38329643 - 3574 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-121A8.1 NA 0.882 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-407G23.2 NA chr16 57140896 57144586 - 3691 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-407G23.2 NA 0.059 80-90% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot LINC01150 long intergenic non-protein coding RNA 1150 chr11 1902647 1907915 + 5269 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01150 NA 0.271 30-40% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP1-191J18.66 NA chr6 107957413 107959986 + 2574 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-191J18.66 NA 0.341 50-60% Testis 1.701939697 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-1018N14.2 NA chr17 51336715 51342571 + 5857 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1018N14.2 NA 0.012 80-90% Testis 4.439580603 Breast_cancer,CRC NA NA boxplot RP11-599B13.8 NA chr17 8199123 8199437 - 315 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-599B13.8 NA 0.012 50-60% Pituitary 2.654275337 Breast_cancer,Normal NA NA boxplot LA16c-313D11.12 NA chr16 689001 692554 + 3554 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LA16c-313D11.12 NA 0.494 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-20G13.1 NA chr15 99427009 99431028 - 4020 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-20G13.1 NA 0.012 20-30% Skin 3.176165256 Breast_cancer,HCC NA NA boxplot RP11-69H7.4 NA chr15 75114261 75114868 + 608 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-69H7.4 NA 0.012 70-80% Testis 4.474785183 NA NA NA boxplot RP1-50O24.6 NA chr1 26876133 26878245 + 2113 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-50O24.6 NA 0.024 80-90% NA NA HCC,Normal NA NA boxplot RP11-380M21.3 NA chr18 47912207 47912504 - 298 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-380M21.3 NA 0.035 30-40% NA NA CRC,Normal,PAAD NA NA boxplot RP11-392O17.1 NA chr1 219409681 219411941 - 2261 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-392O17.1 NA 0.012 10-20% Pancreas 2.276223434 HCC NA NA boxplot STARD13-IT1 STARD13 intronic transcript 1 chr13 33158587 33164409 - 5823 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=STARD13-IT1 NA 0.035 10-20% Nerve 1.547074202 Normal,PAAD NA NA boxplot RP11-50D9.4 NA chr4 127809170 127809477 + 308 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-50D9.4 NA 0.012 80-90% NA NA NA NA NA boxplot RP11-98J23.1 NA chr5 69898867 69903198 - 4332 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-98J23.1 NA 0.459 30-40% Testis 4.906892038 CRC,HCC,Normal,PAAD NA NA boxplot AC016700.4 NA chr2 70102551 70102862 + 312 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC016700.4 NA 0.153 90-100% Testis 4.906892038 CRC,HCC,Normal,PAAD NA NA boxplot PVT1 Pvt1 oncogene (non-protein coding) chr8 127794533 128101253 + 306721 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PVT1 exo_circ_029634,exo_circ_033657,exo_circ_004371,exo_circ_033658,exo_circ_023862 0.953 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up),PAAD(up) NA boxplot CTA-444M12.3 NA chr6 134009033 134009218 + 186 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTA-444M12.3 NA 0.012 90-100% NA NA NA NA NA boxplot RP11-171I2.4 NA chr2 178616581 178617123 + 543 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-171I2.4 NA 0.047 20-30% NA NA CRC,Normal,PAAD NA NA boxplot RPL23AP3 ribosomal protein L23a pseudogene 3 chr21 36016079 36016546 - 468 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL23AP3 NA 0.012 30-40% NA NA Breast_cancer NA NA boxplot RP11-80H5.7 NA chr10 89694295 89697928 - 3634 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-80H5.7 NA 0.106 20-30% NA NA CRC,Normal,PAAD NA NA boxplot CH507-24F1.2 NA chr21 6228966 6267317 - 38352 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CH507-24F1.2 NA 0.565 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD PAAD(up) NA boxplot RP11-484D2.2 NA chr11 43328748 43359296 - 30549 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-484D2.2 NA 0.482 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot IPO9-AS1 IPO9 antisense RNA 1 chr1 201688259 201829559 - 141301 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=IPO9-AS1 NA 0.247 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CTD-2384A14.2 NA chr14 28975836 28978924 - 3089 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2384A14.2 NA 0.012 0-10% Testis 4.906892038 PAAD NA NA boxplot RP11-505P4.7 NA chr6 73523618 73570596 + 46979 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-505P4.7 NA 0.082 60-70% Testis 1.261154362 Normal NA NA boxplot RP11-42O15.3 NA chr1 70445071 70445536 + 466 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-42O15.3 NA 0.012 80-90% Liver 1.165681263 NA NA NA boxplot RP1-136B1.1 NA chr6 2437549 2438249 + 701 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-136B1.1 NA 0.047 60-70% NA NA CRC,Normal NA NA boxplot RP11-35O15.1 NA chr15 98646951 98647371 - 421 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-35O15.1 NA 0.047 40-50% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot RP11-276H19.2 NA chr9 87008455 87042126 - 33672 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-276H19.2 NA 0.024 0-10% NA NA Breast_cancer,Normal,PAAD NA NA boxplot RP11-400N13.3 NA chr1 222041705 222064763 - 23059 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-400N13.3 NA 0.012 10-20% Esophagus 3.446487479 PAAD NA NA boxplot PRSS30P protease, serine, 30 pseudogene chr16 2839568 2842744 - 3177 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PRSS30P NA 0.6 20-30% Testis 1.746201671 Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up) NA boxplot RP11-352D13.6 NA chr15 69278328 69298763 - 20436 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-352D13.6 NA 0.153 50-60% Kidney 2.99335882 Breast_cancer,HCC,Normal,PAAD NA NA boxplot LINC01516 long intergenic non-protein coding RNA 1516 chr10 25113058 25161236 + 48179 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01516 NA 0.047 10-20% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot SAP30L-AS1 SAP30L antisense RNA 1 (head to head) chr5 154329437 154445850 - 116414 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SAP30L-AS1 NA 0.212 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-538D16.3 NA chr1 182086551 182090112 + 3562 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-538D16.3 NA 0.012 80-90% Testis 2.000383908 Breast_cancer,Normal NA NA boxplot RP11-374M1.10 NA chr9 61912704 61913115 + 412 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-374M1.10 NA 0.035 20-30% NA NA Breast_cancer,CRC,PAAD NA NA boxplot RP13-258O15.1 NA chrX 92676519 92676954 - 436 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP13-258O15.1 NA 0.224 90-100% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-686D22.6 NA chr17 35377416 35377678 - 263 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-686D22.6 NA 0.024 70-80% NA NA HCC,Normal,PAAD NA NA boxplot SLC31A1P1 solute carrier family 31 (copper transporter), member 1 pseudogene 1 chr3 172603440 172604006 - 567 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SLC31A1P1 NA 0.012 90-100% NA NA Breast_cancer,Normal NA NA boxplot RP11-887P2.3 NA chr12 93640822 93641586 - 765 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-887P2.3 NA 0.929 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-126O22.7 NA chrX 9409748 9410501 + 754 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-126O22.7 NA 0.012 80-90% NA NA HCC,PAAD NA NA boxplot MIR378D2 microRNA 378d-2 chr8 93915734 93916682 - 949 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MIR378D2 NA 0.059 50-60% Testis 1.627858178 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-613F22.6 NA chr11 18511043 18511475 - 433 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-613F22.6 NA 0.047 60-70% NA NA CRC,Normal NA NA boxplot RP11-341G23.3 NA chr12 103668575 103669406 - 832 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-341G23.3 NA 0.012 80-90% Testis 4.906892038 Breast_cancer,CRC NA NA boxplot RBMS2P1 RNA binding motif, single stranded interacting protein 2 pseudogene 1 chr12 94423744 94424969 - 1226 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RBMS2P1 NA 1 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up),CRC(down),PAAD(down) NA boxplot RP5-934G17.6 NA chr1 11877770 11880406 + 2637 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-934G17.6 NA 0.012 80-90% NA NA Breast_cancer,Normal NA NA boxplot RP11-386G11.10 NA chr12 49127782 49147869 + 20088 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-386G11.10 NA 0.929 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot CH507-513H4.4 NA chr21 8393419 8394341 - 923 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CH507-513H4.4 NA 0.776 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(up),HCC(up),PAAD(up) NA boxplot RP11-483E23.2 NA chr15 28349051 28358080 - 9030 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-483E23.2 NA 0.047 30-40% Testis 4.906892038 Breast_cancer,HCC,PAAD NA NA boxplot FAM25BP protein FAM25 chr10 46369113 46373563 + 4451 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FAM25BP NA 0.012 90-100% NA NA Breast_cancer NA NA boxplot UNC93B2 unc-93 homolog B2 pseudogene (C. elegans) chr7 6855485 6859830 - 4346 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=UNC93B2 NA 0.024 80-90% Spleen 1.204401056 Breast_cancer,CRC,HCC NA NA boxplot RP11-156K13.2 NA chr8 17882043 17882661 + 619 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-156K13.2 NA 0.024 70-80% Liver 4.407996652 HCC NA NA boxplot RP4-680D5.9 NA chr1 15682873 15683128 - 256 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-680D5.9 NA 0.024 50-60% Testis 1.609864377 CRC,Normal NA NA boxplot CTD-2154B17.3 NA chr5 10675317 10675575 - 259 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2154B17.3 NA 0.012 90-100% NA NA NA NA NA boxplot ZNF37CP zinc finger protein 37C, pseudogene chr10 37883594 37884109 + 516 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ZNF37CP NA 0.035 50-60% NA NA Normal,PAAD NA NA boxplot AC019118.3 NA chr2 3131581 3145780 - 14200 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC019118.3 NA 0.024 60-70% NA NA Breast_cancer,CRC NA NA boxplot RCC2P6 regulator of chromosome condensation 2 pseudogene 6 chr11 62371146 62373168 + 2023 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RCC2P6 NA 0.141 40-50% NA NA Breast_cancer,CRC,Normal,PAAD NA NA boxplot RP11-687M24.7 NA chr11 125188115 125191404 + 3290 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-687M24.7 NA 0.012 30-40% Testis 4.906892038 NA NA NA boxplot GS1-44D20.1 NA chr8 69129598 69130345 + 748 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GS1-44D20.1 NA 0.929 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot CTD-2020K17.4 NA chr17 45245186 45248836 - 3651 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2020K17.4 NA 0.365 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-129M6.1 NA chr14 40954898 40975877 + 20980 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-129M6.1 NA 0.035 30-40% NA NA CRC,HCC NA NA boxplot AC096649.1 NA chr2 175184215 175184607 + 393 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC096649.1 NA 0.012 80-90% NA NA Normal NA NA boxplot AC007392.3 NA chr2 66574030 66730157 + 156128 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC007392.3 NA 0.118 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-685N10.1 NA chr11 94472908 94473570 - 663 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-685N10.1 NA 0.153 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot ZSWIM8-AS1 ZSWIM8 antisense RNA 1 chr10 73796514 73801399 - 4886 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ZSWIM8-AS1 NA 0.541 60-70% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-248J18.2 NA chr14 50662511 50663178 - 668 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-248J18.2 NA 0.729 10-20% NA NA CRC,HCC,Normal,PAAD CHD(down),HCC(down) NA boxplot RP11-353N14.2 NA chr17 79823452 79827704 + 4253 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-353N14.2 NA 0.012 90-100% Testis 2.55270639 Breast_cancer,HCC NA NA boxplot HIST2H2BA histone cluster 2, H2ba (pseudogene) chr1 121108210 121117257 - 9048 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HIST2H2BA NA 0.459 20-30% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot FAM183CP family with sequence similarity 183 member C, pseudogene chr8 29921513 29953724 + 32212 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FAM183CP NA 0.024 60-70% Testis 4.906892038 Breast_cancer,HCC NA NA boxplot CTD-2314G24.2 NA chr5 51372736 51383332 - 10597 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2314G24.2 NA 0.059 20-30% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot SMCR2 Smith-Magenis syndrome chromosome region, candidate 2 (non-protein coding) chr17 17674026 17677688 - 3663 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SMCR2 NA 0.012 80-90% Testis 2.127225962 NA NA NA boxplot FOXP1-AS1 FOXP1 antisense RNA 1 chr3 71289769 71305853 + 16085 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FOXP1-AS1 NA 0.024 50-60% Testis 4.244255234 Normal NA NA boxplot AF127577.12 NA chr21 15067070 15067837 + 768 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AF127577.12 NA 0.012 70-80% Testis 1.758282457 Normal NA NA boxplot RP1-8B1.4 NA chr6 46097093 46129706 - 32614 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-8B1.4 exo_circ_027853 0.271 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot PRPF38AP2 PRP38 domain containing A pseudogene 2 chr10 17577362 17578212 + 851 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PRPF38AP2 NA 0.035 90-100% NA NA Breast_cancer,CRC,Normal,PAAD NA NA boxplot ZRANB2-AS1 ZRANB2 antisense RNA 1 chr1 71048855 71067184 + 18330 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ZRANB2-AS1 NA 0.165 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CTD-2649C14.3 NA chr16 22007480 22008062 - 583 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2649C14.3 NA 0.071 10-20% NA NA CRC,HCC,Normal NA NA boxplot RP11-214N9.1 NA chr2 9555899 9556775 + 877 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-214N9.1 NA 0.153 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-123K3.9 NA chr12 57229498 57230198 - 701 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-123K3.9 NA 0.388 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP1-225E12.2 NA chr6 139144204 139239653 - 95450 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-225E12.2 NA 0.859 20-30% Testis 1.232097369 Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),PAAD(down) NA boxplot RP11-379C10.1 NA chr9 128039135 128057362 - 18228 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-379C10.1 NA 0.012 90-100% Testis 4.906892038 HCC NA NA boxplot RPS15AP27 ribosomal protein S15a pseudogene 27 chr9 107963703 107964045 - 343 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPS15AP27 NA 0.012 30-40% NA NA PAAD NA NA boxplot RP11-709D24.8 NA chr16 4532216 4533670 - 1455 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-709D24.8 NA 0.047 50-60% NA NA Breast_cancer,Normal,PAAD NA NA boxplot AC006946.15 NA chr22 17121586 17132104 + 10519 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC006946.15 NA 0.141 60-70% Testis 3.645063418 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot HIF1A-AS1 HIF1A antisense RNA 1 chr14 61681041 61695823 - 14783 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HIF1A-AS1 NA 0.553 30-40% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot STARD7-AS1 STARD7 antisense RNA 1 chr2 96208416 96242621 + 34206 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=STARD7-AS1 exo_circ_026299 0.929 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up),CRC(down),PAAD(down) NA boxplot FUNDC2P2 FUN14 domain containing 2 pseudogene 2 chr2 84290683 84292202 + 1520 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FUNDC2P2 NA 0.435 10-20% Testis 4.894353019 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-563J2.3 NA chr10 6350316 6352762 + 2447 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-563J2.3 NA 0.082 40-50% NA NA Breast_cancer,CRC,Normal NA NA boxplot RP1-47M23.3 NA chr6 107697299 107700218 - 2920 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-47M23.3 NA 0.671 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down) NA boxplot RP11-196B3.2 NA chr18 79496058 79498348 + 2291 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-196B3.2 NA 0.129 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AP001439.2 NA chr21 26158091 26175824 + 17734 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AP001439.2 NA 0.024 70-80% NA NA Normal,PAAD NA NA boxplot RP11-804A23.4 NA chr11 60841806 60851081 - 9276 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-804A23.4 NA 0.176 60-70% NA NA HCC,Normal,PAAD NA NA boxplot MIR137HG MIR137 host gene chr1 97986740 98049863 - 63124 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MIR137HG NA 0.047 40-50% NA NA Breast_cancer,HCC,PAAD NA NA boxplot AC005758.1 NA chr19 27918943 27929370 + 10428 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC005758.1 NA 0.059 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot LINC01358 long intergenic non-protein coding RNA 1358 chr1 58933643 59240555 + 306913 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01358 NA 0.329 30-40% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-71H17.7 NA chr3 124723788 124726325 + 2538 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-71H17.7 NA 0.353 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot SNAP23P1 NA chr20 49038357 49038602 - 246 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SNAP23P1 NA 0.035 80-90% NA NA CRC,HCC,Normal NA NA boxplot AC137932.6 NA chr16 89321133 89325110 + 3978 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC137932.6 exo_circ_015466 0.929 0-10% Muscle 1.313598222 Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),PAAD(down) NA boxplot WT1-AS WT1 antisense RNA chr11 32435518 32458769 + 23252 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=WT1-AS NA 0.106 40-50% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot AC107081.5 NA chr2 61868432 61886082 + 17651 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC107081.5 NA 0.235 20-30% NA NA HCC,Normal,PAAD NA NA boxplot KRT8P42 keratin 8 pseudogene 42 chr6 134296997 134298695 - 1699 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KRT8P42 NA 0.035 40-50% NA NA Breast_cancer,HCC,PAAD NA NA boxplot ANKRD18EP ankyrin repeat domain 18E, pseudogene chr6 39110321 39112952 + 2632 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ANKRD18EP NA 0.2 10-20% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP13-39P12.3 NA chr10 77782866 77793176 + 10311 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP13-39P12.3 NA 0.059 40-50% Testis 1.396099464 Breast_cancer,HCC,Normal,PAAD NA NA boxplot EIF4EBP1P1 eukaryotic translation initiation factor 4E binding protein 1 pseudogene 1 chr14 21419620 21419960 + 341 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=EIF4EBP1P1 NA 0.012 10-20% NA NA Normal NA NA boxplot CTD-2269F5.1 NA chr5 84384427 84490765 + 106339 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2269F5.1 NA 0.047 60-70% NA NA Breast_cancer,CRC,Normal,PAAD NA NA boxplot RP11-452K12.4 NA chr10 97334564 97343203 + 8640 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-452K12.4 NA 0.247 30-40% Testis 4.092314542 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-539L10.4 NA chr4 6691995 6692970 - 976 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-539L10.4 NA 0.012 90-100% NA NA Breast_cancer,CRC NA NA boxplot AP000640.10 NA chr11 59753015 59754975 - 1961 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AP000640.10 NA 0.082 70-80% NA NA Breast_cancer,CRC,Normal NA NA boxplot CTD-3035K23.6 NA chr17 62626031 62626453 + 423 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-3035K23.6 NA 0.035 50-60% NA NA CRC,PAAD NA NA boxplot RPL21P7 ribosomal protein L21 pseudogene 7 chr14 65266638 65267690 - 1053 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL21P7 NA 0.012 90-100% NA NA CRC NA NA boxplot RP1-159A19.3 NA chr1 27649419 27649610 + 192 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-159A19.3 NA 0.859 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-563H6.1 NA chr18 67375133 67375305 + 173 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-563H6.1 NA 0.012 90-100% NA NA Normal NA NA boxplot TM4SF1-AS1 TM4SF1 antisense RNA 1 chr3 149377778 149386583 + 8806 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TM4SF1-AS1 NA 0.071 40-50% Salivary Gland 1.00727698 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RBBP4P4 retinoblastoma binding protein 4 pseudogene 4 chr6 58119741 58121029 - 1289 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RBBP4P4 NA 0.176 90-100% Testis 4.906892038 CRC,HCC,Normal,PAAD NA NA boxplot RP4-603I14.3 NA chr1 46370586 46370955 + 370 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-603I14.3 NA 0.024 50-60% NA NA CRC NA NA boxplot BX470102.3 NA chr1 153533603 153535115 + 1513 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=BX470102.3 NA 0.071 40-50% Bladder 1.107443533 Breast_cancer,HCC,Normal NA NA boxplot LINC00933 long intergenic non-protein coding RNA 933 chr15 84570649 84580175 + 9527 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00933 NA 0.176 70-80% NA NA Breast_cancer,CRC,Normal,PAAD NA NA boxplot RP11-141O11.2 NA chr5 68970692 69030165 - 59474 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-141O11.2 NA 0.047 40-50% NA NA HCC,Normal NA NA boxplot AP000318.2 NA chr21 34205055 34325034 + 119980 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AP000318.2 NA 0.071 90-100% NA NA CRC,HCC,Normal NA NA boxplot TBC1D3P5 TBC1 domain family member 3 pseudogene 5 chr17 27417690 27431623 + 13934 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TBC1D3P5 NA 0.012 50-60% Testis 4.868790791 Breast_cancer,CRC,HCC NA NA boxplot RP11-960D24.1 NA chr11 28679183 28683469 + 4287 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-960D24.1 NA 0.012 50-60% NA NA Normal NA NA boxplot RP11-553A10.1 NA chr3 110888384 110893476 - 5093 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-553A10.1 NA 0.059 20-30% Testis 2.370396284 Breast_cancer,HCC,Normal,PAAD NA NA boxplot RP11-471M2.3 NA chr13 87807634 87811232 - 3599 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-471M2.3 NA 0.071 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot ST13P11 suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein) pseudogene 11 chr11 94913047 94913766 + 720 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ST13P11 NA 0.059 20-30% NA NA CRC,Normal,PAAD NA NA boxplot AC002044.4 NA chr16 73014319 73014476 - 158 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC002044.4 NA 0.012 90-100% Prostate 4.534243255 NA NA NA boxplot CA5AP1 carbonic anhydrase VA pseudogene 1 chr16 29618785 29636328 - 17544 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CA5AP1 NA 0.341 20-30% Testis 4.906892038 CRC,HCC,Normal,PAAD NA NA boxplot LARP1BP1 La ribonucleoprotein domain family member 1B pseudogene 1 chr4 63350114 63351472 + 1359 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LARP1BP1 NA 0.012 70-80% Testis 4.906892038 HCC NA NA boxplot AP000439.1 NA chr11 69425690 69429621 + 3932 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AP000439.1 NA 0.176 30-40% Brain 2.460026439 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC073850.6 NA chr7 80662331 80662585 - 255 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC073850.6 NA 0.024 80-90% NA NA Normal NA NA boxplot AC007292.3 NA chr19 4356637 4358448 - 1812 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC007292.3 NA 0.224 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot OR2W6P olfactory receptor family 2 subfamily W member 6 pseudogene chr6 27937465 27938403 + 939 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=OR2W6P NA 0.059 70-80% Testis 4.436159366 CRC,Normal NA NA boxplot DNAJA1P3 DnaJ heat shock protein family (Hsp40) member A1 pseudogene 3 chrX 107351650 107352843 - 1194 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DNAJA1P3 NA 0.082 90-100% Testis 4.906892038 Breast_cancer,HCC,Normal,PAAD NA NA boxplot HNRNPA1P2 heterogeneous nuclear ribonucleoprotein A1 pseudogene 2 chr6 32325219 32326178 + 960 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HNRNPA1P2 exo_circ_008954 0.153 60-70% Testis 4.417372118 CHD,CRC,HCC,Normal,PAAD NA NA boxplot HSP90AB4P heat shock protein 90kDa alpha family class B member 4, pseudogene chr15 58691106 58693125 - 2020 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HSP90AB4P NA 0.271 10-20% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CTC-378H22.2 NA chr19 42152569 42157523 + 4955 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-378H22.2 NA 0.894 0-10% Spleen 1.718132816 Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot AL162151.3 NA chr14 98973314 98973471 + 158 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AL162151.3 NA 0.929 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),PAAD(down) NA boxplot UQCRHP2 ubiquinol-cytochrome c reductase hinge protein pseudogene 2 chr2 25994794 25995081 + 288 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=UQCRHP2 NA 0.141 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP13-266I11.1 NA chrX 112381392 112382220 + 829 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP13-266I11.1 NA 0.024 40-50% Testis 4.906892038 HCC,Normal,PAAD NA NA boxplot RP11-6N13.1 NA chr5 104383298 105392970 - 1009673 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-6N13.1 NA 0.012 50-60% Testis 4.906892038 NA NA NA boxplot CASC9 cancer susceptibility candidate 9 (non-protein coding) chr8 75223404 75324741 - 101338 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CASC9 NA 0.141 0-10% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CTD-2313J17.1 NA chr15 92805770 92808567 - 2798 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2313J17.1 NA 0.012 80-90% NA NA HCC NA NA boxplot AC004893.10 NA chr7 98998538 98999930 - 1393 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC004893.10 NA 0.024 80-90% NA NA PAAD NA NA boxplot RP11-525A16.4 NA chr10 110428840 110496204 - 67365 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-525A16.4 NA 0.518 10-20% NA NA CRC,HCC,Normal,PAAD PAAD(up) NA boxplot UOX urate oxidase (pseudogene) chr1 84365428 84397831 - 32404 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=UOX NA 0.012 70-80% Testis 2.443533218 Breast_cancer NA NA boxplot RP11-13K12.6 NA chr17 77571418 77572516 + 1099 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-13K12.6 exo_circ_051963 0.012 90-100% NA NA CRC NA NA boxplot AC005785.2 NA chr19 15379076 15381194 + 2119 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC005785.2 NA 0.471 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot HLA-L major histocompatibility complex, class I, L (pseudogene) chr6 30259584 30293014 + 33431 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HLA-L NA 0.506 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC079325.6 NA chr17 74560716 74567343 - 6628 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC079325.6 NA 0.906 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-193F5.1 NA chr14 60879714 60982585 + 102872 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-193F5.1 NA 0.071 50-60% NA NA CRC,Normal,PAAD NA NA boxplot KB-1592A4.15 NA chr22 21114607 21124451 - 9845 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KB-1592A4.15 NA 0.012 60-70% Testis 4.734310964 Breast_cancer,PAAD NA NA boxplot U91328.2 NA chr6 26043989 26044357 + 369 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=U91328.2 NA 0.188 50-60% Testis 4.906892038 CRC,HCC,Normal,PAAD NA NA boxplot AC017002.2 NA chr2 111491943 111494811 - 2869 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC017002.2 NA 0.2 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CTC-546K23.2 NA chr5 121363002 121365314 + 2313 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-546K23.2 NA 0.012 50-60% NA NA Normal NA NA boxplot AC011998.1 NA chr2 177953111 178011989 - 58879 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC011998.1 NA 0.012 80-90% Testis 4.906892038 NA NA NA boxplot EEF1B2P3 eukaryotic translation elongation factor 1 beta 2 pseudogene 3 chrX 24788392 24789069 - 678 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=EEF1B2P3 NA 1 0-10% NA NA CHD,CRC,HCC,Normal,PAAD CRC(down),HCC(down) NA boxplot RP11-134F2.7 NA chr3 186596976 186597200 + 225 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-134F2.7 NA 0.929 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-1012A1.7 NA chr14 67799004 67799609 + 606 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1012A1.7 NA 0.859 20-30% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot TYRO3P TYRO3P protein tyrosine kinase pseudogene chr15 76258986 76261690 - 2705 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TYRO3P NA 0.153 20-30% NA NA Breast_cancer,CRC,Normal,PAAD NA NA boxplot RP11-96K19.2 NA chr1 110943467 110952848 + 9382 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-96K19.2 NA 0.259 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot TDGF1P6 teratocarcinoma-derived growth factor 1 pseudogene 6 chr3 136155549 136155996 + 448 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TDGF1P6 NA 0.012 10-20% NA NA Normal NA NA boxplot AC010524.4 NA chr19 49356152 49357769 + 1618 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC010524.4 NA 0.035 50-60% NA NA Breast_cancer,HCC NA NA boxplot RP11-697H9.2 NA chr11 63637677 63658962 + 21286 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-697H9.2 NA 0.412 50-60% Testis 3.556082766 CRC,HCC,Normal,PAAD NA NA boxplot RP11-45A17.2 NA chr10 131971202 131971533 + 332 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-45A17.2 exo_circ_028185 0.494 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-385F7.1 NA chr6 47477243 47477572 - 330 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-385F7.1 NA 0.094 80-90% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP4-816N1.6 NA chr12 2796877 2812902 - 16026 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-816N1.6 NA 0.341 60-70% Testis 1.195065367 CRC,HCC,Normal,PAAD NA NA boxplot AC113188.2 NA chr8 118189455 118189970 - 516 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC113188.2 exo_circ_016491,exo_circ_022276,exo_circ_055581,exo_circ_039256,exo_circ_044712,exo_circ_050149 0.082 90-100% NA NA CRC,HCC,Normal NA NA boxplot RP4-621N11.2 NA chr20 37095785 37097178 + 1394 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-621N11.2 NA 0.153 50-60% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot PAXIP1-AS1 PAXIP1 antisense RNA 1 (head to head) chr7 155003448 155005703 + 2256 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PAXIP1-AS1 NA 0.671 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP5-903E17.2 NA chr1 15226373 15227549 + 1177 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-903E17.2 NA 0.012 10-20% NA NA Breast_cancer,PAAD NA NA boxplot RP11-360L9.8 NA chr8 41609692 41621502 - 11811 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-360L9.8 NA 0.306 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-1078H9.5 NA chr14 90642638 90648894 + 6257 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1078H9.5 NA 0.176 60-70% Testis 3.309896733 CRC,HCC,Normal,PAAD NA NA boxplot SPDYE15P speedy/RINGO cell cycle regulator family member E15, pseudogene chr7 75337162 75343013 + 5852 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SPDYE15P NA 0.012 70-80% NA NA CHD,PAAD NA NA boxplot RPL39P36 ribosomal protein L39 pseudogene 36 chr19 53413190 53413345 + 156 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL39P36 NA 0.094 50-60% NA NA CRC,HCC,Normal NA NA boxplot CIAPIN1P cytokine induced apoptosis inhibitor 1 pseudogene chr18 26599408 26600338 + 931 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CIAPIN1P NA 0.247 70-80% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-265D17.2 NA chr11 12261426 12263173 - 1748 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-265D17.2 NA 0.376 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot TP53TG1 TP53 target 1 (non-protein coding) chr7 87325225 87345515 - 20291 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TP53TG1 NA 0.988 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up) NA boxplot ZSWIM5P2 zinc finger, SWIM-type containing 5 pseudogene 2 chr17 20583758 20591180 - 7423 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ZSWIM5P2 NA 0.012 0-10% Testis 4.906892038 Breast_cancer,Normal NA NA boxplot GSTA8P glutathione S-transferase alpha 8, pseudogene chr6 52687930 52703825 - 15896 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GSTA8P NA 0.012 0-10% NA NA Breast_cancer,CHD NA NA boxplot LINC00560 long intergenic non-protein coding RNA 560 chr13 88626853 88630397 + 3545 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00560 NA 0.012 90-100% Testis 4.906892038 CRC NA NA boxplot TTTY7B testis-specific transcript, Y-linked 7B (non-protein coding) chrY 9706824 9715262 - 8439 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TTTY7B NA 0.012 20-30% NA NA Normal NA NA boxplot HOTAIRM1 HOXA transcript antisense RNA, myeloid-specific 1 chr7 27095647 27100265 + 4619 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HOTAIRM1 NA 0.871 10-20% NA NA CHD,CRC,HCC,Normal,PAAD HCC(up),PAAD(up) NA boxplot RP11-1000B6.7 NA chr15 32583612 32584312 + 701 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1000B6.7 NA 0.106 70-80% NA NA CRC,HCC,Normal NA NA boxplot AC142293.3 NA chr4 74552584 74589481 - 36898 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC142293.3 NA 0.012 80-90% Testis 4.457631347 Breast_cancer NA NA boxplot RPLP0P6 ribosomal protein, large, P0 pseudogene 6 chr2 38481851 38482804 + 954 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPLP0P6 NA 1 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot SMG1P4 SMG1 pseudogene 4 chr16 21879338 21919156 - 39819 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SMG1P4 NA 0.894 0-10% NA NA CHD,CRC,HCC,Normal,PAAD CHD(up),CRC(up),HCC(up),PAAD(up) NA boxplot RP11-315D16.4 NA chr15 68267792 68277994 - 10203 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-315D16.4 NA 0.071 40-50% Testis 1.769070131 CRC,HCC,Normal,PAAD NA NA boxplot RP11-95P13.1 NA chr1 219435152 219442642 - 7491 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-95P13.1 NA 0.024 0-10% NA NA Breast_cancer,HCC,PAAD NA NA boxplot RP11-294J22.7 NA chr17 50722074 50724224 + 2151 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-294J22.7 NA 0.165 10-20% NA NA CRC,HCC,Normal,PAAD NA NA boxplot LGALS17A Charcot-Leyden crystal protein pseudogene chr19 39679374 39686373 + 7000 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LGALS17A NA 0.047 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot EXOSC3P1 exosome component 3 pseudogene 1 chr21 32496812 32497311 + 500 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=EXOSC3P1 NA 0.059 40-50% NA NA Normal,PAAD NA NA boxplot DUSP8P3 dual specificity phosphatase 8 pseudogene 3 chr10 46774421 46776180 - 1760 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DUSP8P3 NA 0.024 50-60% NA NA Breast_cancer,HCC NA NA boxplot RP4-672N11.1 NA chr3 43778961 43779982 - 1022 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-672N11.1 NA 0.012 80-90% NA NA HCC NA NA boxplot EIF4A1P10 eukaryotic translation initiation factor 4A1 pseudogene 10 chrX 92113246 92114461 - 1216 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=EIF4A1P10 NA 1 0-10% NA NA CHD,CRC,HCC,Normal,PAAD CHD(up) NA boxplot CTC-436P18.1 uncharacterized LOC101928630 chr5 61162070 61232040 + 69971 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-436P18.1 exo_circ_038889,exo_circ_040928 0.294 50-60% Testis 1.335221632 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-666A8.12 NA chr17 76551352 76551750 + 399 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-666A8.12 NA 0.012 70-80% NA NA HCC,Normal NA NA boxplot RP11-203L2.3 NA chr9 68788307 68789670 - 1364 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-203L2.3 NA 0.012 70-80% NA NA Normal NA NA boxplot LYPLAL1-AS1 LYPLAL1 antisense RNA 1 (head to head) chr1 219086602 219173961 - 87360 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LYPLAL1-AS1 exo_circ_043174,exo_circ_043173,exo_circ_043175 0.859 0-10% NA NA CHD,CRC,HCC,Normal,PAAD CHD(down),CRC(down) NA boxplot RSL24D1P6 ribosomal L24 domain containing 1 pseudogene 6 chr20 32170390 32170790 - 401 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RSL24D1P6 NA 0.012 0-10% NA NA Normal NA NA boxplot RP11-9E17.1 NA chr18 26542971 26545791 - 2821 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-9E17.1 NA 0.329 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AP001505.10 NA chr21 44978832 44979274 + 443 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AP001505.10 NA 0.259 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot AP003068.12 NA chr11 65117157 65117458 + 302 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AP003068.12 NA 0.035 30-40% NA NA CRC,HCC,PAAD NA NA boxplot AC010907.2 NA chr2 3603397 3604242 - 846 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC010907.2 NA 0.012 90-100% NA NA Breast_cancer NA NA boxplot RP11-179B15.5 NA chr10 58304553 58305621 + 1069 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-179B15.5 NA 0.012 50-60% NA NA Breast_cancer NA NA boxplot LLNLF-65H9.1 NA chr19 27793488 27984984 + 191497 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LLNLF-65H9.1 NA 0.306 80-90% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-380G5.3 NA chr10 87945502 87946024 + 523 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-380G5.3 NA 0.153 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-44F14.7 NA chr16 53478957 53481550 - 2594 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-44F14.7 NA 0.388 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-22P4.2 NA chr11 28516832 28519341 + 2510 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-22P4.2 exo_circ_050798,exo_circ_045272,exo_circ_033987,exo_circ_045273 0.024 20-30% Testis 2.974206397 PAAD NA NA boxplot RPS3AP44 ribosomal protein S3a pseudogene 44 chr13 26576886 26577675 + 790 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPS3AP44 NA 0.188 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP1-154J13.2 NA chrX 131437055 131437670 - 616 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-154J13.2 NA 0.012 40-50% NA NA Breast_cancer NA NA boxplot RP11-296O14.2 NA chr1 173362397 173363733 - 1337 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-296O14.2 NA 0.106 50-60% NA NA Breast_cancer,CRC,Normal,PAAD NA NA boxplot LINC01019 long intergenic non-protein coding RNA 1019 chr5 3417152 3536094 - 118943 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01019 NA 0.012 70-80% Testis 4.823219491 Breast_cancer,PAAD NA NA boxplot RPL5P18 ribosomal protein L5 pseudogene 18 chr6 127362513 127363403 + 891 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL5P18 NA 0.047 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot ETF1P2 eukaryotic translation termination factor 1 pseudogene 2 chr7 151501878 151503463 + 1586 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ETF1P2 NA 0.024 40-50% NA NA HCC,Normal,PAAD NA NA boxplot RP13-228J13.6 NA chrX 155290360 155291353 - 994 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP13-228J13.6 NA 0.094 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-244M2.1 NA chr18 39206924 39800318 - 593395 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-244M2.1 exo_circ_057755,exo_circ_057756,exo_circ_052028,exo_circ_052031 0.529 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD PAAD(up) NA boxplot LA16c-358B7.3 NA chr16 1317891 1322845 - 4955 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LA16c-358B7.3 NA 0.565 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP13-383K5.4 NA chrX 107131659 107132269 + 611 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP13-383K5.4 NA 0.894 0-10% Testis 1.034401067 CRC,HCC,Normal,PAAD CHD(down) NA boxplot AC002127.2 NA chr7 88749470 88749694 + 225 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC002127.2 NA 0.012 70-80% NA NA Breast_cancer NA NA boxplot RP4-676J13.2 NA chr6 83983728 84007323 + 23596 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-676J13.2 NA 0.035 70-80% Testis 4.764625979 CRC,HCC,Normal NA NA boxplot RP11-507E23.1 NA chr14 75595805 75596206 - 402 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-507E23.1 NA 0.129 90-100% NA NA CRC,HCC,Normal NA NA boxplot RP4-737E23.5 NA chr20 23148086 23149939 + 1854 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-737E23.5 NA 0.047 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot SNRPD2P1 small nuclear ribonucleoprotein D2 pseudogene 1 chr10 89978717 89979070 + 354 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SNRPD2P1 NA 0.024 70-80% Testis 4.906892038 Breast_cancer,CRC,Normal NA NA boxplot ACTBP8 actin, beta pseudogene 8 chr6 88275882 88276989 - 1108 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ACTBP8 NA 0.024 70-80% Whole Blood 3.389086898 CRC NA NA boxplot AC009950.2 NA chr2 230121370 230174223 + 52854 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC009950.2 NA 0.329 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-430C7.5 NA chr1 204626775 204629712 + 2938 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-430C7.5 NA 0.141 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-61I13.3 NA chr6 39881804 39900071 - 18268 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-61I13.3 NA 0.035 20-30% NA NA Breast_cancer,HCC NA NA boxplot CITF22-1A6.3 NA chr22 49902228 49904576 + 2349 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CITF22-1A6.3 exo_circ_011593 0.259 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot ATP6V1G1P2 ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G1 pseudogene 2 chr8 47194002 47194347 - 346 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ATP6V1G1P2 NA 0.012 30-40% NA NA Breast_cancer,Normal NA NA boxplot YES1P1 YES1 pseudogene 1 chr22 25647261 25649232 + 1972 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=YES1P1 NA 0.212 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP4-816N1.7 NA chr12 2797136 2803938 - 6803 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-816N1.7 NA 0.341 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot WDR86-AS1 WDR86 antisense RNA 1 chr7 151409161 151413354 + 4194 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=WDR86-AS1 NA 0.835 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up),CRC(down),PAAD(down) NA boxplot RP4-684O24.5 NA chr20 1947246 2007517 + 60272 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-684O24.5 NA 0.024 80-90% NA NA Breast_cancer,CRC,PAAD NA NA boxplot AC004854.4 NA chr7 44848416 44849568 + 1153 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC004854.4 NA 0.035 90-100% Testis 3.960902921 CRC,PAAD NA NA boxplot HMGN2P5 high mobility group nucleosomal binding domain 2 pseudogene 5 chr15 29730713 29730985 + 273 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HMGN2P5 NA 1 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-472I20.5 NA chr11 43718676 43719143 + 468 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-472I20.5 NA 0.082 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot OFD1P2Y OFD1 pseudogene 2, Y-linked chrY 18080681 18096202 - 15522 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=OFD1P2Y NA 0.024 10-20% NA NA CHD,HCC NA NA boxplot HLA-J major histocompatibility complex, class I, J (pseudogene) chr6 30005971 30009956 + 3986 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HLA-J NA 0.306 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot PTGER4P2-CDK2AP2P2 PTGER4P2-CDK2AP2P2 readthrough transcribed pseudogene chr9 41276280 41282846 + 6567 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PTGER4P2-CDK2AP2P2 NA 0.188 30-40% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-469H8.6 NA chr12 49951512 49962924 - 11413 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-469H8.6 NA 0.012 80-90% Salivary Gland 2.405413934 Breast_cancer,HCC NA NA boxplot RPL12P8 ribosomal protein L12 pseudogene 8 chr10 67874332 67874911 + 580 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL12P8 NA 0.988 0-10% NA NA CHD,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-444D3.1 NA chr12 24213256 24562590 - 349335 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-444D3.1 exo_circ_056587,exo_circ_004947,exo_circ_045451 0.435 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CTB-26E19.1 NA chr5 178438681 178443094 - 4414 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTB-26E19.1 NA 0.024 80-90% Testis 3.657744085 Breast_cancer,CRC NA NA boxplot RP11-244F12.3 NA chr15 63046034 63049387 - 3354 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-244F12.3 exo_circ_045894 0.553 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot RP11-10K16.1 NA chr4 173131928 173169652 - 37725 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-10K16.1 NA 0.718 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),HCC(down) NA boxplot RP11-114M1.1 NA chr3 177683627 177691250 + 7624 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-114M1.1 NA 0.012 50-60% NA NA CRC NA NA boxplot RP11-848P1.7 NA chr17 31008154 31008319 - 166 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-848P1.7 NA 0.024 80-90% NA NA HCC,PAAD NA NA boxplot RP11-338E21.2 NA chr12 64628344 64629976 + 1633 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-338E21.2 NA 0.024 80-90% NA NA CRC,Normal NA NA boxplot PKMP5 pyruvate kinase, muscle pseudogene 5 chr6 5972412 5974012 + 1601 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PKMP5 NA 0.012 90-100% NA NA Breast_cancer,HCC NA NA boxplot RP5-915N17.11 NA chr1 228486188 228487120 - 933 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-915N17.11 NA 0.024 40-50% NA NA Breast_cancer,HCC,Normal NA NA boxplot RP11-167P22.4 NA chr10 72560264 72560456 + 193 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-167P22.4 NA 0.012 10-20% NA NA Normal NA NA boxplot AC010878.3 NA chr2 37816915 37817961 + 1047 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC010878.3 NA 0.024 90-100% Whole Blood 3.582722137 CRC,Normal NA NA boxplot PSMC1P9 proteasome (prosome, macropain) 26S subunit, ATPase, 1 pseudogene 9 chr12 18692762 18694096 + 1335 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PSMC1P9 NA 0.141 80-90% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP1-55C23.7 NA chr6 132752675 132753951 + 1277 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-55C23.7 NA 0.012 80-90% NA NA Normal,PAAD NA NA boxplot RP11-324I22.4 NA chr10 35314552 35336401 - 21850 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-324I22.4 NA 0.482 10-20% NA NA CRC,HCC,Normal,PAAD NA NA boxplot PHF5CP PHD finger protein 5C pseudogene chr19 19588091 19588415 - 325 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PHF5CP NA 0.024 90-100% Thyroid 4.906892038 PAAD NA NA boxplot RP11-96J15.2 NA chr9 62474948 62476333 - 1386 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-96J15.2 NA 0.071 60-70% NA NA HCC,Normal NA NA boxplot OR51B2 olfactory receptor family 51 subfamily B member 2 (gene/pseudogene) chr11 5323359 5324297 - 939 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=OR51B2 NA 0.024 70-80% NA NA Normal NA NA boxplot RP11-173M1.4 NA chr17 27333256 27348491 + 15236 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-173M1.4 NA 0.282 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-510N19.5 NA chr1 202011370 202015657 + 4288 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-510N19.5 NA 0.082 20-30% Bladder 1.649725986 Breast_cancer,CRC,HCC,PAAD NA NA boxplot GS1-21A4.1 NA chr16 87892938 87893685 - 748 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GS1-21A4.1 NA 0.094 80-90% NA NA CRC,Normal,PAAD NA NA boxplot RP4-784A16.2 NA chr1 53288024 53289706 + 1683 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-784A16.2 NA 0.024 10-20% Testis 4.88980885 Breast_cancer,PAAD NA NA boxplot RP11-20I23.11 NA chr16 2554975 2556105 + 1131 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-20I23.11 NA 0.071 50-60% NA NA CRC,HCC NA NA boxplot HNRNPA1P22 heterogeneous nuclear ribonucleoprotein A1 pseudogene 22 chr3 42889361 42890306 + 946 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HNRNPA1P22 NA 0.012 10-20% Nerve 1.517416879 Normal NA NA boxplot AC012123.1 NA chr18 32769795 32774413 + 4619 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC012123.1 NA 0.165 50-60% Thyroid 2.329240997 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC010240.3 NA chr5 132987652 132988110 - 459 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC010240.3 NA 0.012 70-80% NA NA Breast_cancer,Normal NA NA boxplot NAV2-AS2 NAV2 antisense RNA 2 chr11 20043846 20049303 - 5458 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NAV2-AS2 NA 0.035 90-100% Heart 3.915796645 Breast_cancer,CRC,HCC,Normal NA NA boxplot NAALADL2-AS1 NAALADL2 antisense RNA 1 chr3 175773145 175776333 - 3189 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NAALADL2-AS1 NA 0.012 50-60% Testis 4.906892038 HCC NA NA boxplot AMD1P3 adenosylmethionine decarboxylase 1 pseudogene 3 chr5 43586918 43588223 - 1306 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AMD1P3 NA 0.318 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP3-336K20__B.2 NA chr6 7620422 7620878 + 457 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-336K20__B.2 NA 0.012 90-100% NA NA Breast_cancer,Normal NA NA boxplot OSTCP5 oligosaccharyltransferase complex subunit pseudogene 5 chr1 45069977 45070429 - 453 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=OSTCP5 NA 0.012 40-50% NA NA PAAD NA NA boxplot RP11-819C21.1 NA chr11 107312132 107316271 - 4140 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-819C21.1 exo_circ_028279 0.482 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot DDX11-AS1 DDX11 antisense RNA 1 chr12 31020763 31073847 - 53085 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DDX11-AS1 NA 0.129 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot BAALC-AS2 BAALC antisense RNA 2 chr8 103132963 103141475 - 8513 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=BAALC-AS2 NA 0.035 40-50% NA NA Breast_cancer,HCC NA NA boxplot CTD-2270P14.5 NA chr16 2777319 2780568 + 3250 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2270P14.5 exo_circ_015448 0.176 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CTD-2081C10.1 NA chr5 53776644 53819686 - 43043 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2081C10.1 exo_circ_019832 0.024 40-50% Testis 4.906892038 Breast_cancer,CRC,HCC,Normal NA NA boxplot RP11-445K13.2 NA chr10 13415202 13423133 + 7932 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-445K13.2 NA 0.082 20-30% Salivary Gland 2.572029661 HCC,Normal,PAAD NA NA boxplot RPS4XP14 ribosomal protein S4X pseudogene 14 chr12 1757231 1758011 - 781 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPS4XP14 NA 0.024 70-80% NA NA Breast_cancer,Normal NA NA boxplot RP11-115D19.4 NA chr4 89747802 89755853 + 8052 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-115D19.4 NA 0.012 20-30% NA NA Normal NA NA boxplot PRR7-AS1 PRR7 antisense RNA 1 chr5 177438503 177447699 - 9197 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PRR7-AS1 NA 0.506 20-30% Testis 1.075526393 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-79H23.3 NA chr8 78837529 78840522 + 2994 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-79H23.3 NA 0.118 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-68I3.11 NA chr17 29644796 29645847 - 1052 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-68I3.11 NA 0.494 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-120B7.1 NA chr5 108593609 108593967 + 359 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-120B7.1 NA 0.835 60-70% Ovary 4.906892038 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-667K14.3 NA chr17 2043475 2044968 - 1494 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-667K14.3 NA 0.082 50-60% NA NA HCC,Normal NA NA boxplot RP11-77A13.1 NA chr2 118949306 118952983 - 3678 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-77A13.1 NA 0.024 70-80% Lung 4.612359632 Breast_cancer,CRC,HCC NA NA boxplot LINC00222 long intergenic non-protein coding RNA 222 chr6 108751654 108769942 + 18289 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00222 NA 0.012 60-70% NA NA Breast_cancer NA NA boxplot AC078852.1 NA chr4 1356581 1358075 + 1495 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC078852.1 NA 0.024 90-100% NA NA CRC NA NA boxplot RP11-575F12.2 NA chr12 127145072 127146532 - 1461 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-575F12.2 NA 0.024 50-60% NA NA HCC,Normal NA NA boxplot DLGAP1-AS1 DLGAP1 antisense RNA 1 chr18 3593732 3598352 + 4621 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DLGAP1-AS1 NA 0.941 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD PAAD(up) NA boxplot RP11-554D20.2 NA chr15 60847757 60849068 - 1312 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-554D20.2 exo_circ_022897 0.012 50-60% NA NA NA NA NA boxplot RP11-307C19.1 NA chr15 77525540 77534110 + 8571 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-307C19.1 NA 0.071 40-50% NA NA Breast_cancer,HCC,PAAD NA NA boxplot KRT18P6 keratin 18 pseudogene 6 chr14 35511825 35513089 - 1265 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KRT18P6 NA 0.024 20-30% Testis 3.775210747 Breast_cancer,HCC NA NA boxplot AC004980.8 NA chr7 76521611 76522074 + 464 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC004980.8 NA 0.059 40-50% NA NA CRC,Normal,PAAD NA NA boxplot RP11-755O11.2 NA chr12 101646720 101659970 - 13251 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-755O11.2 NA 0.012 30-40% Testis 4.181346742 Normal NA NA boxplot RP11-472G21.2 NA chr10 71878356 71879107 + 752 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-472G21.2 NA 0.012 90-100% Testis 4.44715474 HCC NA NA boxplot EDNRB-AS1 EDNRB antisense RNA 1 chr13 77828222 77833950 + 5729 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=EDNRB-AS1 NA 0.035 20-30% Testis 4.407256278 CRC,Normal,PAAD NA NA boxplot DLGAP4-AS1 DLGAP4 antisense RNA 1 chr20 36507702 36573391 - 65690 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DLGAP4-AS1 NA 0.518 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CRC(down),HCC(down) NA boxplot CTB-179K24.3 NA chr19 45076510 45090391 - 13882 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTB-179K24.3 NA 0.165 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot LINC00605 long intergenic non-protein coding RNA 605 chr14 103187221 103189028 - 1808 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00605 NA 0.047 10-20% Testis 1.72542822 Breast_cancer,CHD,CRC,HCC NA NA boxplot AC098617.1 NA chr2 191846539 192044525 + 197987 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC098617.1 exo_circ_053639,exo_circ_009692 0.812 0-10% Thyroid 1.615893463 Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot RP11-64J4.7 NA chr17 3309986 3311446 + 1461 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-64J4.7 NA 0.012 90-100% NA NA Breast_cancer,Normal NA NA boxplot PRDX2P3 peroxiredoxin 2 pseudogene 3 chr5 179572156 179572741 + 586 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PRDX2P3 NA 0.141 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-762H8.2 NA chr15 78290527 78291221 - 695 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-762H8.2 NA 0.306 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot ATP6V1B1-AS1 ATP6V1B1 antisense RNA 1 chr2 70941817 70948610 - 6794 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ATP6V1B1-AS1 NA 0.047 60-70% NA NA CRC,PAAD NA NA boxplot LINC01213 long intergenic non-protein coding RNA 1213 chr3 150238519 150240209 + 1691 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01213 NA 0.012 90-100% NA NA Normal NA NA boxplot GOLGA2P8 golgin A2 pseudogene 8 chr15 90291962 90295683 + 3722 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GOLGA2P8 NA 0.059 40-50% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot SMG1P3 SMG1 pseudogene 3 chr16 21446683 21520444 - 73762 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SMG1P3 NA 1 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up),CRC(up),HCC(up),PAAD(up) NA boxplot RP11-57C13.3 NA chr10 87610163 87660003 - 49841 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-57C13.3 NA 0.047 80-90% Testis 4.906892038 CRC,HCC,Normal NA NA boxplot CTA-992D9.11 NA chr22 27019369 27024550 + 5182 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTA-992D9.11 NA 0.024 80-90% NA NA Breast_cancer,CRC,Normal NA NA boxplot AGBL5-AS1 AGBL5 antisense RNA 1 chr2 27049683 27050264 - 582 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AGBL5-AS1 NA 0.153 70-80% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot AP001058.3 NA chr21 44206525 44207399 - 875 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AP001058.3 NA 0.118 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RAB1C RAB1C, member RAS oncogene family pseudogene chr9 37636688 37637293 - 606 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RAB1C NA 0.071 80-90% NA NA CHD,HCC,Normal,PAAD NA NA boxplot RP11-12A20.7 NA chr9 67725890 67726544 + 655 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-12A20.7 NA 0.306 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot ATP5HP4 ATP synthase, H+ transporting, mitochondrial Fo complex subunit D pseudogene 4 chr12 68642519 68642993 - 475 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ATP5HP4 NA 0.024 0-10% NA NA Normal NA NA boxplot RP11-344B2.2 NA chr18 32287437 32290340 + 2904 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-344B2.2 NA 0.024 60-70% NA NA Breast_cancer,HCC,PAAD NA NA boxplot RP11-5P18.10 NA chr1 16035178 16040029 - 4852 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-5P18.10 NA 0.012 80-90% Brain 1.723409624 Breast_cancer NA NA boxplot GLYCTK-AS1 GLYCTK antisense RNA 1 chr3 52288580 52299067 - 10488 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GLYCTK-AS1 NA 0.082 70-80% Testis 1.743148293 CRC,HCC,Normal NA NA boxplot ARHGAP23P1 Rho GTPase activating protein 23 pseudogene 1 chr16 33907419 33937167 - 29749 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ARHGAP23P1 NA 0.2 70-80% NA NA Breast_cancer,CHD,CRC,HCC,PAAD NA NA boxplot SPATA31D2P SPATA31 subfamily D, member 2, pseudogene chr9 81966564 81972130 + 5567 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SPATA31D2P NA 0.012 60-70% Testis 4.906892038 Breast_cancer,Normal NA NA boxplot RP11-396C23.4 NA chr1 226060712 226061876 - 1165 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-396C23.4 NA 0.2 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP4-682C21.5 NA chr1 75710003 75724011 - 14009 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-682C21.5 NA 0.024 10-20% Testis 4.906892038 PAAD NA NA boxplot RP3-477O4.14 NA chr20 35476203 35490982 - 14780 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-477O4.14 NA 0.812 10-20% Spleen 1.434081097 CRC,HCC,Normal,PAAD CHD(down),PAAD(down) NA boxplot CH17-264B6.3 NA chr7 73065529 73077353 + 11825 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CH17-264B6.3 NA 0.682 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-845C23.2 NA chr18 58371566 58372666 + 1101 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-845C23.2 NA 0.024 60-70% NA NA Normal NA NA boxplot RP11-353N14.4 NA chr17 79919357 79925462 + 6106 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-353N14.4 NA 0.012 80-90% NA NA Breast_cancer NA NA boxplot AC007308.7 NA chr22 20889206 20891214 - 2009 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC007308.7 NA 0.235 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-664D1.1 NA chr12 3871734 3910338 + 38605 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-664D1.1 NA 0.6 30-40% Testis 3.995716704 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-343H19.1 NA chr16 56708772 56729968 - 21197 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-343H19.1 NA 0.024 30-40% Testis 1.658224203 Breast_cancer,CRC,HCC,Normal NA NA boxplot RP11-74E22.8 NA chr17 2720801 2723947 - 3147 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-74E22.8 NA 0.035 60-70% NA NA Breast_cancer,Normal NA NA boxplot RP11-119K6.6 NA chr10 94577439 94611238 + 33800 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-119K6.6 NA 0.141 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP4-605O3.4 NA chr12 50112197 50165618 + 53422 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-605O3.4 NA 0.459 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CTC-203F4.2 NA chr5 135399280 135401296 + 2017 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-203F4.2 NA 0.365 50-60% Testis 1.208131574 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-1182P23.5 NA chr17 82035403 82035800 - 398 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1182P23.5 NA 0.012 80-90% NA NA HCC NA NA boxplot HCG22 HLA complex group 22 chr6 31053450 31059890 + 6441 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HCG22 exo_circ_055198 0.153 40-50% Vagina 3.412894436 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot ZNF350-AS1 ZNF350 antisense RNA 1 chr19 51949134 51981367 + 32234 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ZNF350-AS1 exo_circ_042916 0.071 50-60% NA NA CHD,HCC,Normal,PAAD NA NA boxplot AC018712.2 NA chr2 172674212 172674898 - 687 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC018712.2 NA 0.024 70-80% NA NA Breast_cancer,PAAD NA NA boxplot CTB-79E8.3 NA chr5 172656522 172656713 - 192 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTB-79E8.3 NA 0.929 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),PAAD(down) NA boxplot AC073072.5 NA chr7 22725395 22727620 - 2226 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC073072.5 NA 0.235 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC137932.5 NA chr16 89297508 89298317 + 810 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC137932.5 NA 0.059 70-80% NA NA CRC,Normal NA NA boxplot AC006978.6 NA chr7 30371508 30372741 + 1234 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC006978.6 NA 0.906 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down) NA boxplot AC126365.1 NA chr17 20716481 20737127 + 20647 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC126365.1 NA 0.082 30-40% Testis 3.365424141 HCC,Normal NA NA boxplot RP4-758J24.4 NA chr1 54089856 54090093 + 238 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-758J24.4 NA 0.024 50-60% NA NA Normal NA NA boxplot RP11-15P13.1 NA chr9 20331446 20332277 + 832 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-15P13.1 NA 0.012 90-100% NA NA Normal NA NA boxplot OR5G5P olfactory receptor family 5 subfamily G member 5 pseudogene chr11 56801856 56820422 - 18567 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=OR5G5P NA 0.012 80-90% Spleen 4.364077615 HCC NA NA boxplot RP11-712L6.7 NA chr11 126292922 126294254 - 1333 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-712L6.7 NA 0.082 70-80% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RPSAP16 ribosomal protein SA pseudogene 16 chr1 179968686 179969506 + 821 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPSAP16 NA 0.094 20-30% NA NA CHD,CRC,HCC,Normal NA NA boxplot SENCR smooth muscle and endothelial cell enriched migration/differentiation-associated long non-coding RNA chr11 128691672 128696023 - 4352 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SENCR NA 0.988 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-686G23.2 NA chr11 80751200 80762826 - 11627 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-686G23.2 NA 0.059 80-90% Testis 4.906892038 CRC,Normal,PAAD NA NA boxplot DPP10-AS1 DPP10 antisense RNA 1 chr2 115130935 115161343 - 30409 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DPP10-AS1 NA 0.024 40-50% NA NA Breast_cancer,HCC NA NA boxplot RPL9P25 ribosomal protein L9 pseudogene 25 chr15 66379337 66379915 - 579 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL9P25 NA 0.294 80-90% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot FAM230C family with sequence similarity 230 member C chr13 18195297 18232024 + 36728 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FAM230C NA 0.012 10-20% NA NA NA NA NA boxplot SMG1P2 SMG1 pseudogene 2 chr16 29527568 29594966 - 67399 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SMG1P2 NA 0.988 0-10% NA NA CHD,CRC,HCC,Normal,PAAD CRC(up),HCC(up),PAAD(up) NA boxplot RFPL4AP6 ret finger protein-like 4A pseudogene 6 chr22 29432944 29435005 + 2062 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RFPL4AP6 NA 0.118 50-60% NA NA CHD,CRC,HCC,Normal NA NA boxplot LINC01259 long intergenic non-protein coding RNA 1259 chr4 38509767 38518056 + 8290 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01259 NA 0.082 80-90% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-507K2.3 NA chr14 88551597 88552493 + 897 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-507K2.3 NA 0.094 20-30% NA NA HCC,Normal,PAAD NA NA boxplot AC106900.6 NA chr2 173880865 173899428 - 18564 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC106900.6 NA 0.094 70-80% Testis 4.27147462 Breast_cancer,CRC,Normal,PAAD NA NA boxplot CTA-243E7.1 NA chr22 25052122 25065241 - 13120 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTA-243E7.1 NA 0.035 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot TMEM161B-AS1 TMEM161B antisense RNA 1 chr5 88268895 88436685 + 167791 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TMEM161B-AS1 NA 0.941 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down),CRC(up),PAAD(up) NA boxplot FAM155A-IT1 FAM155A intronic transcript 1 chr13 107788342 107835451 - 47110 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FAM155A-IT1 NA 0.024 0-10% Testis 4.345315728 PAAD NA NA boxplot RP11-199H2.2 NA chr1 215393646 215394418 - 773 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-199H2.2 exo_circ_037999 0.012 90-100% NA NA Breast_cancer,PAAD NA NA boxplot AC093818.1 NA chr2 172480840 172556596 - 75757 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC093818.1 exo_circ_018817,exo_circ_003353,exo_circ_007159 0.929 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-471L13.3 NA chr17 12115547 12115885 + 339 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-471L13.3 NA 0.047 40-50% NA NA CRC,Normal,PAAD NA NA boxplot EMBP1 embigin pseudogene 1 chr1 121519112 121571892 + 52781 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=EMBP1 NA 1 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up),CRC(up),HCC(up) NA boxplot PPIL1P1 peptidylprolyl isomerase like 1 pseudogene 1 chr2 26162056 26162554 + 499 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PPIL1P1 NA 0.024 60-70% Brain 4.906892038 Breast_cancer,CRC,PAAD NA NA boxplot RP11-762E8.1 NA chr2 195451778 195515699 - 63922 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-762E8.1 NA 0.012 60-70% Testis 4.906892038 HCC NA NA boxplot NDUFAF4P3 NADH:ubiquinone oxidoreductase complex assembly factor 4 pseudogene 3 chr3 37789921 37790445 - 525 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NDUFAF4P3 NA 0.659 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down),HCC(down),PAAD(down) NA boxplot RP11-539I5.1 NA chr10 116828761 116850205 - 21445 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-539I5.1 NA 0.6 10-20% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down) NA boxplot RP11-95M15.3 NA chr6 137693068 137700415 + 7348 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-95M15.3 NA 0.047 60-70% NA NA HCC,Normal NA NA boxplot RP11-10A14.9 NA chr8 9158063 9158621 + 559 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-10A14.9 exo_circ_044832 0.047 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-661C8.3 NA chr5 979365 981300 + 1936 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-661C8.3 NA 0.012 60-70% Testis 4.569339815 PAAD NA NA boxplot RPLP2P1 ribosomal protein, large P2, pseudogene 1 chr6 27965175 27965514 + 340 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPLP2P1 NA 0.035 90-100% NA NA Normal NA NA boxplot RP11-68I3.10 NA chr17 29621617 29622254 - 638 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-68I3.10 NA 0.035 40-50% NA NA Breast_cancer,CRC,PAAD NA NA boxplot AC074363.1 NA chr2 167293171 167558333 + 265163 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC074363.1 NA 0.024 60-70% Testis 3.557686141 HCC,PAAD NA NA boxplot NRBF2P3 nuclear receptor binding factor 2 pseudogene 3 chr1 110848077 110848941 - 865 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NRBF2P3 NA 0.294 80-90% Testis 4.906892038 CHD,CRC,HCC,Normal,PAAD NA NA boxplot AC092657.2 NA chr7 46302120 46343621 + 41502 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC092657.2 NA 0.012 70-80% NA NA Normal NA NA boxplot RP11-466F5.8 NA chr1 165768929 165775176 + 6248 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-466F5.8 NA 0.165 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CTD-3193O13.8 NA chr19 7926001 7926810 + 810 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-3193O13.8 NA 0.012 90-100% NA NA Breast_cancer,Normal NA NA boxplot RP11-1143G9.5 NA chr12 69326574 69331882 - 5309 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1143G9.5 NA 0.071 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CTD-2376I4.2 NA chr5 72955206 72955699 - 494 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2376I4.2 NA 0.129 40-50% Testis 1.330665768 CRC,HCC,Normal,PAAD NA NA boxplot KRT18P37 keratin 18 pseudogene 37 chr8 41511240 41512521 + 1282 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KRT18P37 NA 0.024 80-90% NA NA Breast_cancer,Normal NA NA boxplot RPL9P9 NA chr15 82372196 82372912 - 717 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL9P9 NA 0.929 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot AC138744.2 NA chr17 64491523 64491789 + 267 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC138744.2 NA 0.024 20-30% NA NA Breast_cancer,CRC,Normal NA NA boxplot RP11-340I6.6 NA chr7 63893286 63894641 + 1356 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-340I6.6 NA 0.929 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(down),PAAD(down) NA boxplot AC072062.1 NA chr2 214810229 214963274 + 153046 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC072062.1 NA 0.365 20-30% Testis 1.763390477 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP3-368A4.6 NA chrX 74209976 74213660 - 3685 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-368A4.6 NA 0.576 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(up),PAAD(up) NA boxplot PTP4A2P2 protein tyrosine phosphatase type IVA, member 2 pseudogene 2 chr11 134123828 134124329 - 502 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PTP4A2P2 NA 0.894 0-10% NA NA CHD,CRC,HCC,Normal,PAAD CHD(down),HCC(down),PAAD(down) NA boxplot AC007249.3 NA chr2 10452319 10455552 + 3234 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC007249.3 NA 0.435 20-30% Testis 2.490038457 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AZGP1P1 alpha-2-glycoprotein 1, zinc-binding pseudogene 1 chr7 99980762 99987535 + 6774 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AZGP1P1 NA 0.024 20-30% Liver 3.0485032 Breast_cancer,CRC,HCC NA NA boxplot RP11-864G5.3 NA chr11 102229851 102230922 - 1072 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-864G5.3 NA 0.271 50-60% NA NA HCC,Normal,PAAD NA NA boxplot DUX4L50 double homeobox 4 like 50 (pseudogene) chr9 63817748 63818462 - 715 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DUX4L50 NA 0.224 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot ARF4P4 ADP ribosylation factor 4 pseudogene 4 chr13 80888348 80888867 + 520 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ARF4P4 NA 0.012 90-100% Nerve 4.18919952 Breast_cancer,CRC NA NA boxplot RP3-467N11.2 NA chr6 100889603 100890338 + 736 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-467N11.2 exo_circ_055036 0.082 30-40% Testis 4.283553763 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-458F8.1 NA chr7 66848496 66858136 + 9641 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-458F8.1 exo_circ_055474 0.424 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot FAM99B family with sequence similarity 99 member B (non-protein coding) chr11 1683269 1685629 - 2361 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FAM99B NA 0.024 20-30% Liver 4.358091599 Breast_cancer,HCC,PAAD NA NA boxplot RP11-745A24.2 NA chr15 60404463 60404960 + 498 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-745A24.2 NA 0.012 90-100% Testis 4.437470546 HCC,Normal NA NA boxplot LA16c-390E6.4 NA chr16 1451760 1452653 + 894 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LA16c-390E6.4 NA 0.024 90-100% NA NA Breast_cancer,CRC,Normal NA NA boxplot RP11-579O24.3 NA chr17 58965952 58966727 + 776 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-579O24.3 NA 0.012 60-70% NA NA NA NA NA boxplot AC062029.1 NA chr2 88627539 88631821 + 4283 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC062029.1 NA 0.706 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),HCC(down),PAAD(down) NA boxplot CTC-436P18.4 NA chr5 61114432 61116753 - 2322 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-436P18.4 NA 0.012 40-50% NA NA Normal NA NA boxplot RP4-769N13.7 NA chrX 102599657 102659712 - 60056 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-769N13.7 NA 0.059 90-100% NA NA HCC,Normal NA NA boxplot RP11-498C9.12 NA chr17 81922899 81924511 + 1613 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-498C9.12 NA 0.6 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-866E20.1 NA chr18 59929226 59930330 + 1105 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-866E20.1 NA 0.012 60-70% NA NA HCC NA NA boxplot RP11-342M1.6 NA chr1 42891094 42892430 - 1337 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-342M1.6 NA 0.012 90-100% Testis 4.906892038 Breast_cancer NA NA boxplot RP5-1160K1.3 NA chr1 109596225 109597781 + 1557 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-1160K1.3 NA 0.035 50-60% NA NA HCC,Normal,PAAD NA NA boxplot LA16c-60G3.8 NA chr22 15562017 15564276 - 2260 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LA16c-60G3.8 NA 0.012 70-80% Prostate 3.993845948 Breast_cancer,HCC NA NA boxplot SMAD1-AS1 SMAD1 antisense RNA 1 chr4 145514615 145517118 - 2504 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SMAD1-AS1 NA 0.176 70-80% NA NA HCC,Normal,PAAD NA NA boxplot CTB-33G10.6 NA chr19 49688853 49690573 - 1721 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTB-33G10.6 NA 0.024 80-90% NA NA HCC,Normal NA NA boxplot AC006153.3 NA chr7 90469787 90488964 + 19178 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC006153.3 NA 0.047 20-30% Testis 4.906892038 HCC,Normal NA NA boxplot SLC7A5P2 solute carrier family 7 (amino acid transporter light chain, L system), member 5 pseudogene 2 chr16 21519830 21520365 - 536 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SLC7A5P2 NA 0.565 40-50% NA NA CHD,CRC,HCC,Normal,PAAD CHD(up) NA boxplot RP11-712P20.2 NA chr18 35595901 35597599 + 1699 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-712P20.2 NA 0.106 30-40% NA NA CRC,Normal,PAAD NA NA boxplot RP11-363J17.1 NA chr2 203328459 203329226 - 768 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-363J17.1 NA 0.282 70-80% Testis 3.687873036 CRC,HCC,Normal,PAAD NA NA boxplot RP1-127L4.7 NA chr22 32141267 32143272 + 2006 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-127L4.7 NA 0.012 20-30% Testis 4.332787261 CRC NA NA boxplot ANKRD20A9P ankyrin repeat domain 20 family member A9, pseudogene chr13 18816718 18871967 - 55250 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ANKRD20A9P NA 0.259 10-20% Testis 3.583306936 CHD,CRC,HCC,Normal,PAAD CHD(up) NA boxplot RP11-537H15.4 NA chr9 34133157 34134696 - 1540 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-537H15.4 NA 0.259 70-80% Testis 4.341505097 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP4-539M6.14 NA chr22 30475364 30492804 + 17441 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-539M6.14 NA 0.024 80-90% NA NA Breast_cancer,CRC,HCC NA NA boxplot DDX50P2 DEAD-box helicase 50 pseudogene 2 chr3 154352136 154354799 - 2664 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DDX50P2 NA 0.494 20-30% NA NA CHD,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot RP11-536O18.1 NA chr9 13446491 13487511 + 41021 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-536O18.1 exo_circ_010584 0.6 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot AC073464.11 NA chr2 94795808 94806452 - 10645 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC073464.11 NA 0.035 50-60% NA NA HCC,PAAD NA NA boxplot CTD-3096M3.2 NA chr18 5381641 5385330 - 3690 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-3096M3.2 NA 0.012 90-100% Testis 2.796643704 NA NA NA boxplot RP11-540B6.6 NA chr15 30926514 30928407 + 1894 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-540B6.6 NA 0.365 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-73M18.7 NA chr14 103694560 103695170 + 611 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-73M18.7 NA 0.729 10-20% NA NA CRC,HCC,Normal,PAAD CHD(down) NA boxplot FAM86GP family with sequence similarity 86, member A pseudogene chr11 3410352 3422496 - 12145 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FAM86GP NA 0.129 80-90% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot CTC-429P9.3 NA chr19 16633797 16635269 - 1473 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-429P9.3 NA 0.565 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CRC(up) NA boxplot RP11-495P10.10 NA chr1 148435105 148436926 + 1822 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-495P10.10 NA 0.812 20-30% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(down),PAAD(down) NA boxplot RP4-800G7.2 NA chr7 149285281 149297312 + 12032 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-800G7.2 NA 0.329 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-318C2.1 NA chr11 8768778 8810231 + 41454 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-318C2.1 NA 0.012 70-80% Testis 3.872995111 Breast_cancer NA NA boxplot RP11-448G4.4 NA chr1 197757319 197761965 + 4647 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-448G4.4 NA 0.012 50-60% NA NA Normal NA NA boxplot RPL23AP2 ribosomal protein L23a pseudogene 2 chr19 15611657 15612122 + 466 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL23AP2 NA 1 0-10% NA NA CHD,CRC,HCC,Normal,PAAD CHD(up),CRC(up),HCC(up) NA boxplot GOLGA6L17P golgin A6 family-like 17, pseudogene chr15 82519590 82526412 + 6823 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GOLGA6L17P NA 0.753 50-60% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up) NA boxplot RP11-667K14.14 NA chr17 2072823 2072956 + 134 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-667K14.14 NA 0.012 70-80% NA NA HCC NA NA boxplot CTD-2033C11.1 NA chr5 65924629 65925135 - 507 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2033C11.1 NA 0.188 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-642D6.1 NA chr2 62348948 62350739 - 1792 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-642D6.1 NA 0.012 20-30% NA NA Normal NA NA boxplot LINC01018 long intergenic non-protein coding RNA 1018 chr5 6582136 6588499 + 6364 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01018 NA 0.094 30-40% Liver 1.963595154 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot DLX2-AS1 DLX2 antisense RNA 1 (head to head) chr2 172103006 172109982 + 6977 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DLX2-AS1 NA 0.012 90-100% NA NA Breast_cancer NA NA boxplot RP11-625H11.2 NA chr15 62682916 62690448 - 7533 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-625H11.2 NA 0.024 40-50% Testis 4.708438216 Breast_cancer,Normal NA NA boxplot RP11-567F11.1 NA chr2 148044380 148044894 + 515 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-567F11.1 exo_circ_021572 0.082 20-30% NA NA CRC,HCC,PAAD NA NA boxplot LINC00596 long intergenic non-protein coding RNA 596 chr14 23922247 23934568 - 12322 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00596 NA 0.012 60-70% Testis 4.906892038 Breast_cancer,Normal NA NA boxplot RP11-560J1.2 NA chr6 15243923 15245000 - 1078 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-560J1.2 NA 0.2 70-80% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot RP11-737O24.3 NA chr18 2945550 2946890 - 1341 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-737O24.3 NA 0.882 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-545A16.4 NA chr1 179590372 179591305 + 934 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-545A16.4 NA 0.012 80-90% Testis 1.85748016 Breast_cancer NA NA boxplot PYCARD-AS1 PYCARD antisense RNA 1 chr16 31201885 31203452 + 1568 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PYCARD-AS1 NA 0.588 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot DPRXP3 divergent-paired related homeobox pseudogene 3 chr14 35222174 35222746 + 573 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DPRXP3 NA 0.047 10-20% NA NA Normal,PAAD NA NA boxplot AC016730.1 NA chr2 13723048 13758152 + 35105 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC016730.1 NA 0.012 90-100% Prostate 4.261099057 NA NA NA boxplot RP11-436P7.2 NA chr8 13741809 13742781 + 973 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-436P7.2 NA 0.012 90-100% Testis 4.906892038 NA NA NA boxplot RP11-1277A3.3 NA chr5 177554824 177555364 + 541 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1277A3.3 NA 0.118 70-80% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RRP7BP ribosomal RNA processing 7 homolog B, pseudogene chr22 42555223 42582038 - 26816 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RRP7BP exo_circ_015570 0.918 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down),PAAD(up) NA boxplot OR8D2 olfactory receptor family 8 subfamily D member 2 (gene/pseudogene) chr11 124319238 124320288 - 1051 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=OR8D2 NA 0.012 90-100% Testis 4.906892038 Breast_cancer NA NA boxplot RPL31P49 ribosomal protein L31 pseudogene 49 chr12 110460988 110461362 + 375 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL31P49 NA 0.071 30-40% Spleen 3.935798288 CRC,HCC,Normal,PAAD NA NA boxplot EIF4A1P7 eukaryotic translation initiation factor 4A1 pseudogene 7 chr13 28598833 28600052 + 1220 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=EIF4A1P7 NA 0.071 90-100% NA NA CHD,HCC,Normal,PAAD NA NA boxplot RP11-715J22.2 NA chr16 2464950 2468213 - 3264 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-715J22.2 NA 0.047 70-80% Testis 2.080284247 Breast_cancer,CRC,Normal NA NA boxplot MTUS2-AS1 MTUS2 antisense RNA 1 chr13 29476515 29490105 - 13591 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MTUS2-AS1 NA 0.059 10-20% Pituitary 1.083182764 Breast_cancer,CHD,PAAD NA NA boxplot CTD-2309O5.3 NA chr17 3134969 3177031 - 42063 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2309O5.3 NA 0.012 40-50% Testis 4.086337506 Breast_cancer,CRC NA NA boxplot ENPP7P5 ectonucleotide pyrophosphatase/phosphodiesterase 7 pseudogene 5 chr12 8254527 8308855 - 54329 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ENPP7P5 NA 0.024 20-30% NA NA Breast_cancer,HCC,PAAD NA NA boxplot BNIP3P41 BCL2/adenovirus E1B 19kDa interacting protein 3 pseudogene 41 chr4 49096 50124 - 1029 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=BNIP3P41 NA 0.035 30-40% NA NA Breast_cancer,CRC,Normal NA NA boxplot AC005954.3 NA chr19 3754620 3756659 - 2040 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC005954.3 NA 0.012 70-80% NA NA PAAD NA NA boxplot RP11-108B14.4 NA chr10 22225698 22226024 + 327 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-108B14.4 NA 0.047 80-90% Testis 3.332549222 CRC,HCC,PAAD NA NA boxplot RP11-96B2.1 NA chr8 122485515 122489815 - 4301 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-96B2.1 NA 0.765 0-10% Testis 2.48534235 CRC,HCC,Normal,PAAD CHD(down),PAAD(up) NA boxplot RP5-1042K10.12 NA chr22 40433136 40433641 + 506 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-1042K10.12 NA 0.012 90-100% NA NA PAAD NA NA boxplot RP1-122O8.7 NA chr6 89673469 89675783 + 2315 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-122O8.7 NA 0.224 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot FTH1P16 ferritin, heavy polypeptide 1 pseudogene 16 chr11 77734475 77735026 - 552 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FTH1P16 NA 0.965 60-70% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot LRRC37A5P leucine-rich repeat containing 37 member A5, pseudogene chr9 111602831 111631289 - 28459 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LRRC37A5P NA 0.082 50-60% Testis 1.532459286 Breast_cancer,HCC,Normal,PAAD NA NA boxplot LLNLR-304G9.1 NA chr19 5294247 5294696 + 450 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LLNLR-304G9.1 NA 0.012 20-30% NA NA Normal NA NA boxplot DUX4L35 double homeobox 4 like 35 (pseudogene) chr20 29448517 29449306 - 790 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DUX4L35 NA 0.012 70-80% NA NA Breast_cancer,Normal NA NA boxplot MEIS3P2 Meis homeobox 3 pseudogene 2 chr17 20589293 20590367 + 1075 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MEIS3P2 NA 0.706 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down) NA boxplot CTD-2290P7.1 NA chr5 32522758 32523865 + 1108 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2290P7.1 NA 0.035 50-60% NA NA HCC,Normal,PAAD NA NA boxplot RP11-241F15.10 NA chr4 49579833 49580189 + 357 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-241F15.10 NA 0.024 0-10% Testis 4.064360391 CRC,PAAD NA NA boxplot RP13-452N2.1 NA chr7 151806490 151810820 + 4331 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP13-452N2.1 NA 0.212 50-60% Kidney 3.01167794 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CTD-2538C1.2 NA chr19 32687089 32691750 - 4662 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2538C1.2 NA 0.6 20-30% Testis 2.110380023 CRC,HCC,Normal,PAAD NA NA boxplot COL4A2-AS1 COL4A2 antisense RNA 1 chr13 110502575 110508179 - 5605 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=COL4A2-AS1 NA 0.059 90-100% NA NA Breast_cancer,CRC,HCC,PAAD NA NA boxplot CTC-548K16.1 NA chr19 14333743 14343916 + 10174 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-548K16.1 NA 0.047 30-40% NA NA Breast_cancer,HCC,Normal NA NA boxplot RP11-571F15.2 NA chr9 34191555 34191881 + 327 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-571F15.2 NA 0.094 60-70% NA NA CRC,Normal,PAAD NA NA boxplot CTA-796E4.4 NA chr22 26161910 26163214 - 1305 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTA-796E4.4 NA 0.012 80-90% NA NA Breast_cancer NA NA boxplot RP11-867G2.6 NA chr11 94641907 94651631 + 9725 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-867G2.6 NA 0.082 40-50% Testis 4.558597374 CRC,HCC,Normal NA NA boxplot SETP15 SET pseudogene 15 chrX 15917548 15918631 + 1084 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SETP15 NA 0.012 60-70% NA NA CRC NA NA boxplot RP11-1157N2__B.2 NA chr18 14816151 14825249 - 9099 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1157N2__B.2 NA 0.059 40-50% NA NA HCC,PAAD NA NA boxplot INTS6P1 integrator complex subunit 6 pseudogene 1 chr5 39718984 39721513 - 2530 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=INTS6P1 NA 0.741 30-40% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot OR11M1P olfactory receptor family 11 subfamily M member 1 pseudogene chr12 48627888 48628782 + 895 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=OR11M1P NA 0.012 10-20% Testis 4.906892038 Breast_cancer NA NA boxplot CTA-292E10.8 NA chr22 28814914 28815662 + 749 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTA-292E10.8 NA 0.129 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-236P24.3 NA chrX 53093710 53094858 - 1149 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-236P24.3 NA 0.024 90-100% NA NA Breast_cancer,PAAD NA NA boxplot MYO5BP1 myosin VB pseudogene 1 chr9 41292887 41294125 + 1239 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MYO5BP1 NA 0.012 70-80% Testis 4.012035801 Breast_cancer,HCC NA NA boxplot RP11-945F5.1 NA chr14 45567995 45569069 + 1075 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-945F5.1 NA 0.024 20-30% Testis 4.906892038 HCC,Normal NA NA boxplot CTD-2023N9.1 NA chr5 57395060 57533424 + 138365 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2023N9.1 exo_circ_004006 0.388 20-30% Testis 1.607388982 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC068282.3 NA chr2 127389130 127400580 + 11451 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC068282.3 NA 0.576 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-1193F23.1 NA chr2 136230753 136233245 + 2493 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1193F23.1 NA 0.282 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CTB-36H16.2 NA chr5 122832356 122834533 + 2178 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTB-36H16.2 NA 0.835 10-20% NA NA CRC,HCC,Normal,PAAD CHD(down),HCC(down) NA boxplot RP11-445N20.3 NA chr7 149881359 149881580 - 222 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-445N20.3 NA 0.024 90-100% NA NA CRC NA NA boxplot RP5-965G21.4 NA chr20 25239007 25245229 - 6223 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-965G21.4 NA 0.082 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-5N11.2 NA chr5 31657218 31665067 + 7850 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-5N11.2 NA 0.129 80-90% Testis 4.841132724 CRC,HCC,Normal,PAAD NA NA boxplot RP11-556N4.1 NA chr4 75830751 75832705 + 1955 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-556N4.1 NA 0.012 90-100% Testis 4.906892038 NA NA NA boxplot RP3-332B22.1 NA chr6 140067435 140093721 + 26287 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-332B22.1 NA 0.035 80-90% Heart 2.296145844 CRC,HCC NA NA boxplot RP11-297A16.2 NA chr10 35098006 35127020 - 29015 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-297A16.2 NA 0.071 70-80% Testis 4.212504442 CRC,HCC,Normal NA NA boxplot RP13-204A15.5 NA chrX 74122134 74122725 - 592 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP13-204A15.5 NA 0.012 80-90% NA NA CRC,Normal NA NA boxplot RP11-330O11.3 NA chr10 30831828 30833387 - 1560 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-330O11.3 NA 0.165 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-425D17.2 NA chr12 28236227 28236828 + 602 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-425D17.2 NA 0.047 60-70% NA NA CRC,Normal NA NA boxplot RP11-73M14.1 NA chr12 22395088 22398075 - 2988 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-73M14.1 NA 0.035 10-20% NA NA Normal NA NA boxplot LINC01429 long intergenic non-protein coding RNA 1429 chr20 51831797 51862912 - 31116 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01429 NA 0.012 70-80% NA NA Breast_cancer NA NA boxplot FAM35CP family with sequence similarity 35, member A2 (pseudogene) chr14 87952527 87955203 + 2677 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FAM35CP NA 0.071 80-90% NA NA CRC,HCC,Normal,PAAD NA NA boxplot DNAJC19P9 DnaJ heat shock protein family (Hsp40) member C19 pseudogene 9 chr14 45290036 45290386 + 351 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DNAJC19P9 NA 0.8 20-30% NA NA CHD,CRC,HCC,Normal,PAAD CHD(down),CRC(down),PAAD(down) NA boxplot NDUFB8P2 NADH:ubiquinone oxidoreductase subunit B8 pseudogene 2 chr17 59885015 59885552 + 538 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NDUFB8P2 NA 0.012 20-30% NA NA Breast_cancer,CRC NA NA boxplot NDUFB4P5 NADH:ubiquinone oxidoreductase subunit B4 pseudogene 5 chr2 86934462 86934822 - 361 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NDUFB4P5 NA 0.012 80-90% NA NA CRC NA NA boxplot AC079305.8 NA chr2 177155622 177212662 - 57041 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC079305.8 NA 0.176 60-70% Testis 4.906892038 CRC,HCC,Normal,PAAD NA NA boxplot CTD-3222D19.5 NA chr19 16586905 16587985 - 1081 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-3222D19.5 NA 0.047 90-100% NA NA CRC,Normal NA NA boxplot RP11-734B5.2 NA chr18 68721082 68721560 + 479 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-734B5.2 NA 0.024 30-40% NA NA Normal,PAAD NA NA boxplot AC004623.3 NA chr19 1372238 1374364 - 2127 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC004623.3 NA 0.012 0-10% NA NA Breast_cancer,CRC,HCC,PAAD NA NA boxplot HNRNPA1P76 heterogeneous nuclear ribonucleoprotein A1 pseudogene 76 chr11 3972881 3974237 - 1357 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HNRNPA1P76 NA 0.012 10-20% NA NA PAAD NA NA boxplot LDHAP4 lactate dehydrogenase A pseudogene 4 chr9 14921337 14922334 - 998 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LDHAP4 NA 0.671 50-60% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-398A8.4 NA chr3 72061061 72069933 + 8873 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-398A8.4 NA 0.012 0-10% NA NA Normal NA NA boxplot CTD-2240J17.3 NA chr15 81393625 81394082 + 458 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2240J17.3 NA 0.024 60-70% NA NA CRC NA NA boxplot AP000704.5 NA chr21 36966492 36975164 + 8673 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AP000704.5 NA 0.176 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC008440.10 NA chr19 53864763 53866140 + 1378 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC008440.10 NA 0.035 30-40% NA NA Normal,PAAD NA NA boxplot RP11-250B2.6 NA chr6 80355424 80356859 + 1436 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-250B2.6 NA 0.141 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot LINC01559 long intergenic non-protein coding RNA 1559 chr12 13371089 13387167 - 16079 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01559 NA 0.094 10-20% NA NA Breast_cancer,CRC,HCC,PAAD NA NA boxplot MTND6P21 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 6 pseudogene 21 chr21 44472895 44473739 + 845 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MTND6P21 NA 0.012 90-100% NA NA Normal NA NA boxplot RP11-767N6.7 NA chr1 45694684 45697075 - 2392 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-767N6.7 NA 0.235 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot LINC01465 long intergenic non-protein coding RNA 1465 chr12 62601751 62603690 - 1940 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01465 NA 0.353 20-30% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up) NA boxplot HILS1 histone linker H1 domain, spermatid-specific 1 (pseudogene) chr17 50171428 50181178 - 9751 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HILS1 NA 0.012 90-100% Testis 1.700754665 Breast_cancer,HCC NA NA boxplot RP11-1K3.1 NA chr12 108281103 108282235 - 1133 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1K3.1 NA 0.012 90-100% NA NA Breast_cancer,Normal NA NA boxplot RP11-417F21.1 NA chr2 46568256 46580238 - 11983 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-417F21.1 NA 0.082 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-506H21.5 NA chr17 58202352 58203003 - 652 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-506H21.5 NA 0.106 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-608O8.2 NA chr3 16275060 16276632 - 1573 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-608O8.2 NA 0.035 80-90% NA NA CRC,Normal NA NA boxplot RP11-972K6.1 NA chr12 53632788 53633151 - 364 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-972K6.1 NA 0.012 90-100% NA NA NA NA NA boxplot LINC01024 long intergenic non-protein coding RNA 1024 chr5 140072857 140108630 - 35774 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01024 exo_circ_033263 0.824 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up),HCC(up),PAAD(up) NA boxplot RP11-177A2.5 NA chr1 179035309 179035652 - 344 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-177A2.5 NA 0.024 60-70% NA NA CRC,HCC,Normal NA NA boxplot AC109642.1 NA chr2 30346659 30352431 + 5773 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC109642.1 NA 0.129 20-30% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot CTA-989H11.1 NA chr22 42278188 42278846 + 659 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTA-989H11.1 NA 0.094 80-90% NA NA CRC,HCC,Normal NA NA boxplot RP11-143N13.2 NA chr16 20580999 20586640 + 5642 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-143N13.2 NA 0.024 10-20% Kidney 4.067896234 HCC,PAAD NA NA boxplot RP11-440G5.2 NA chr9 91426238 91427144 + 907 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-440G5.2 NA 0.012 90-100% Testis 1.230675453 NA NA NA boxplot RP11-299G20.2 NA chr15 101295419 101305737 + 10319 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-299G20.2 NA 0.576 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot RP11-750H9.5 NA chr11 47383148 47409190 - 26043 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-750H9.5 NA 0.929 0-10% Whole Blood 1.742445571 Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),HCC(down),PAAD(down) NA boxplot RP11-635N19.2 NA chr18 63415317 63416469 - 1153 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-635N19.2 NA 0.094 50-60% NA NA Breast_cancer,CRC,Normal,PAAD NA NA boxplot RP6-201G10.2 NA chrX 68013470 68014901 - 1432 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP6-201G10.2 NA 0.071 40-50% NA NA HCC,Normal,PAAD NA NA boxplot RP11-687F6.5 NA chr18 46786699 46789297 - 2599 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-687F6.5 NA 0.024 40-50% NA NA PAAD NA NA boxplot AP000280.66 NA chr21 32790673 32791504 - 832 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AP000280.66 NA 0.012 90-100% NA NA Breast_cancer,HCC NA NA boxplot NPM1P37 nucleophosmin 1 (nucleolar phosphoprotein B23, numatrin) pseudogene 37 chr6 69705287 69706160 - 874 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NPM1P37 NA 0.212 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP4-584D14.5 NA chr7 150363777 150372590 - 8814 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-584D14.5 NA 0.165 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-597D13.9 NA chr4 158170752 158202877 + 32126 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-597D13.9 NA 0.859 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),HCC(down) NA boxplot AC012314.8 NA chr19 54119511 54125343 - 5833 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC012314.8 NA 0.435 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC104699.1 NA chr2 25421117 25427643 + 6527 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC104699.1 NA 0.682 10-20% Spleen 2.998431268 Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-338C15.3 NA chr1 212653999 212665434 - 11436 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-338C15.3 NA 0.565 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP13-104F24.2 NA chr17 64749663 64781707 - 32045 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP13-104F24.2 NA 0.918 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP4-791K14.2 NA chr20 49318337 49441654 + 123318 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-791K14.2 NA 0.141 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-5O24.1 NA chr2 238289127 238300185 + 11059 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-5O24.1 NA 0.024 90-100% NA NA Breast_cancer,HCC,Normal NA NA boxplot AC103563.8 NA chr2 95025193 95026709 - 1517 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC103563.8 NA 0.2 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot TAT-AS1 TAT antisense RNA 1 chr16 71565789 71578187 + 12399 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TAT-AS1 NA 0.012 90-100% NA NA NA NA NA boxplot RP5-1125A11.4 NA chr20 34014969 34017749 - 2781 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-1125A11.4 NA 0.024 10-20% Testis 4.906892038 Normal NA NA boxplot RP11-1072A3.3 NA chr16 30984630 30988270 - 3641 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1072A3.3 NA 0.106 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-62I21.1 NA chr1 245206444 245234501 - 28058 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-62I21.1 NA 0.012 90-100% NA NA Normal NA NA boxplot RP11-138C9.1 NA chr17 47682417 47682683 - 267 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-138C9.1 NA 0.306 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-483I13.2 NA chr1 108261196 108273689 - 12494 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-483I13.2 NA 0.024 30-40% Testis 4.906892038 Normal,PAAD NA NA boxplot RP11-137J7.3 NA chr6 142062717 142063053 + 337 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-137J7.3 NA 0.259 80-90% Testis 3.661897857 CRC,HCC,Normal,PAAD NA NA boxplot RP11-23P13.6 NA chr15 41892793 41898575 + 5783 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-23P13.6 NA 0.259 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AGGF1P10 angiogenic factor with G-patch and FHA domains 1 pseudogene 10 chr20 29430723 29432913 + 2191 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AGGF1P10 NA 0.082 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CTD-2144E22.9 NA chr16 34941977 34943880 + 1904 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2144E22.9 NA 0.012 80-90% NA NA Breast_cancer,HCC NA NA boxplot AC072061.2 NA chr7 39816549 39868140 + 51592 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC072061.2 NA 0.047 70-80% Testis 4.726789752 CRC,Normal,PAAD NA NA boxplot PRMT5-AS1 PRMT5 antisense RNA 1 chr14 22918947 22926900 + 7954 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PRMT5-AS1 NA 0.588 30-40% Testis 2.560583528 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP5-1011O1.2 NA chr1 192517639 192567217 - 49579 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-1011O1.2 NA 0.024 50-60% NA NA HCC NA NA boxplot SETP3 SET pseudogene 3 chr17 58476138 58476950 - 813 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SETP3 NA 0.294 90-100% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot PIGHP1 phosphatidylinositol glycan anchor biosynthesis class H pseudogene 1 chr15 59676757 59677321 + 565 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PIGHP1 NA 0.024 90-100% NA NA HCC,Normal NA NA boxplot DNAH17-AS1 DNAH17 antisense RNA 1 chr17 78484882 78503056 + 18175 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DNAH17-AS1 NA 0.012 70-80% Brain 2.949565808 Breast_cancer NA NA boxplot RP11-57H14.3 NA chr10 112888735 112906111 + 17377 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-57H14.3 NA 0.294 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot AC079325.5 NA chr17 74549399 74552737 - 3339 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC079325.5 NA 0.035 40-50% Whole Blood 4.906892038 Breast_cancer,HCC,Normal NA NA boxplot RP11-815J21.1 NA chr15 85701109 85702771 + 1663 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-815J21.1 NA 0.271 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-631N16.4 NA chr12 62603909 62604399 + 491 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-631N16.4 NA 0.141 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot LINC01393 long intergenic non-protein coding RNA 1393 chr7 115078958 115126314 + 47357 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01393 NA 0.165 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot DNM1P41 dynamin 1 pseudogene 41 chr15 84166547 84169896 - 3350 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DNM1P41 exo_circ_057286 0.047 90-100% NA NA Breast_cancer,CRC,PAAD NA NA boxplot RP11-399E6.4 NA chr1 41375004 41375669 - 666 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-399E6.4 NA 0.024 80-90% NA NA Breast_cancer,HCC NA NA boxplot RP11-146E13.5 NA chr14 19131842 19132890 - 1049 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-146E13.5 NA 0.024 80-90% NA NA HCC NA NA boxplot CTD-2560C21.1 NA chr14 66760532 66761018 + 487 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2560C21.1 NA 0.035 40-50% NA NA CRC,PAAD NA NA boxplot RP11-545P7.4 NA chr12 113185624 113192161 - 6538 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-545P7.4 NA 0.024 60-70% NA NA HCC,Normal NA NA boxplot CTD-3126B10.4 NA chr16 2644084 2645214 - 1131 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-3126B10.4 NA 0.035 80-90% NA NA CRC NA NA boxplot RP5-1031D4.3 NA chr10 7411599 7413467 + 1869 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-1031D4.3 NA 0.047 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-165N19.2 NA chr9 112173522 112173971 - 450 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-165N19.2 NA 0.165 50-60% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot RPL23AP43 ribosomal protein L23a pseudogene 43 chr3 32785646 32786116 + 471 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL23AP43 NA 0.082 80-90% NA NA HCC,Normal,PAAD NA NA boxplot RP13-126P21.2 NA chrX 39837536 39848358 - 10823 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP13-126P21.2 NA 0.035 80-90% NA NA Breast_cancer,CRC NA NA boxplot RP11-651L5.2 NA chr12 106245613 106246956 - 1344 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-651L5.2 NA 0.035 90-100% NA NA Breast_cancer,CRC,Normal NA NA boxplot RP11-1110F20.1 NA chr11 36196248 36197901 + 1654 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1110F20.1 NA 0.035 60-70% NA NA Normal,PAAD NA NA boxplot UGT2B27P UDP glucuronosyltransferase 2 family, polypeptide B27 pseudogene chr4 69004862 69020414 - 15553 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=UGT2B27P NA 0.071 10-20% NA NA HCC NA NA boxplot CFL1P2 cofilin 1 (non-muscle) pseudogene 2 chr1 51157788 51158471 - 684 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CFL1P2 NA 0.012 60-70% Testis 4.387057775 Breast_cancer,CRC NA NA boxplot RP11-293M10.2 NA chr14 75259411 75271950 + 12540 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-293M10.2 NA 0.082 70-80% Testis 4.842757427 Breast_cancer,CRC,Normal NA NA boxplot MTND1P11 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 1 pseudogene 11 chr9 5094139 5095014 + 876 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MTND1P11 NA 0.129 40-50% Testis 2.199672152 CRC,HCC,Normal,PAAD NA NA boxplot RP11-326C3.7 NA chr11 310139 311141 - 1003 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-326C3.7 NA 0.318 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CTD-3032J10.2 NA chr19 17152588 17168051 - 15464 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-3032J10.2 NA 0.576 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot AC104134.2 NA chr2 88538720 88575610 + 36891 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC104134.2 NA 0.153 50-60% Testis 1.721689963 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot U91324.1 NA chr2 8139402 8143269 + 3868 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=U91324.1 NA 0.047 10-20% Liver 4.637861139 CRC,Normal NA NA boxplot RP11-570P14.1 NA chr1 44122153 44122512 - 360 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-570P14.1 NA 0.929 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down),PAAD(up) NA boxplot RP11-3P17.5 NA chr3 161429112 161429613 + 502 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-3P17.5 NA 0.929 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot COX6CP14 cytochrome c oxidase subunit VIc pseudogene 14 chr3 49758483 49758656 + 174 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=COX6CP14 NA 0.012 90-100% NA NA CRC NA NA boxplot RP11-803B1.8 NA chr3 75435348 75457486 + 22139 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-803B1.8 NA 0.318 50-60% Testis 1.114484751 CRC,HCC,Normal,PAAD NA NA boxplot KATNBL1P6 katanin p80 subunit B-like 1 pseudogene 6 chr6 146802359 146803824 - 1466 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KATNBL1P6 NA 0.694 20-30% NA NA CHD,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot CTD-2267D19.3 NA chr17 40360655 40364693 + 4039 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2267D19.3 NA 0.694 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot ZNF252P zinc finger protein 252, pseudogene chr8 144973589 145002895 - 29307 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ZNF252P NA 1 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot APOA1-AS APOA1 antisense RNA chr11 116836117 116855729 + 19613 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=APOA1-AS NA 0.106 10-20% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot RP11-44N11.1 NA chr8 122807746 122816517 + 8772 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-44N11.1 NA 0.259 30-40% Testis 1.570824583 CRC,HCC,Normal,PAAD NA NA boxplot SDAD1P1 SDA1 domain containing 1 pseudogene 1 chr8 26379259 26382953 - 3695 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SDAD1P1 NA 0.835 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-849F2.9 NA chr17 8277763 8278436 + 674 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-849F2.9 NA 0.012 10-20% NA NA Breast_cancer NA NA boxplot CTD-2245E15.3 NA chr5 1544107 1551710 - 7604 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2245E15.3 NA 0.082 10-20% NA NA HCC,Normal,PAAD NA NA boxplot RP11-547I7.1 NA chr1 190264898 190362270 + 97373 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-547I7.1 NA 0.012 80-90% Testis 4.906892038 HCC NA NA boxplot CTB-13F3.1 NA chr7 107942116 107942740 + 625 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTB-13F3.1 NA 0.035 80-90% NA NA CRC NA NA boxplot PCAT5 prostate cancer associated transcript 5 (non-protein coding) chr10 35778302 35800920 + 22619 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PCAT5 NA 0.012 40-50% NA NA Breast_cancer,Normal NA NA boxplot RP11-89K11.1 NA chr15 101737099 101746870 - 9772 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-89K11.1 NA 0.506 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-215G15.4 NA chr5 10664495 10665113 - 619 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-215G15.4 NA 0.176 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-736N17.9 NA chr14 103207748 103207789 + 42 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-736N17.9 NA 0.012 30-40% NA NA Breast_cancer,PAAD NA NA boxplot RP11-999E24.3 NA chr14 57993545 57994525 - 981 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-999E24.3 NA 0.082 50-60% NA NA HCC,Normal NA NA boxplot ATP13A4-AS1 ATP13A4 antisense RNA 1 chr3 193553213 193555088 + 1876 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ATP13A4-AS1 NA 0.012 90-100% Lung 3.855484538 HCC NA NA boxplot RP11-184I16.4 NA chr1 43709392 43727343 - 17952 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-184I16.4 NA 0.024 20-30% Muscle 4.665431036 HCC,Normal NA NA boxplot CTD-3065B20.2 NA chr15 90595840 90596447 - 608 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-3065B20.2 NA 0.012 30-40% NA NA Breast_cancer,CRC NA NA boxplot APOC1P1 apolipoprotein C-I pseudogene 1 chr19 44926804 44931386 + 4583 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=APOC1P1 NA 0.212 30-40% Liver 3.959965799 Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-40E6.1 NA chr13 109785831 109808252 + 22422 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-40E6.1 NA 0.176 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot HTATSF1P2 HIV-1 Tat specific factor 1 pseudogene 2 chr6 3023142 3023772 - 631 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HTATSF1P2 NA 0.671 0-10% NA NA CHD,CRC,HCC,Normal,PAAD CHD(up),CRC(up) NA boxplot RP11-465N4.4 NA chr1 202000094 202010353 - 10260 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-465N4.4 NA 0.071 20-30% NA NA CRC,HCC,PAAD NA NA boxplot AMZ2P1 archaelysin family metallopeptidase 2 pseudogene 1 chr17 64966550 64975576 - 9027 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AMZ2P1 NA 0.953 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot WASF4P WAS protein family member 4, pseudogene chrX 47803296 47804789 + 1494 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=WASF4P NA 1 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD HCC(up),PAAD(down) NA boxplot RP11-519G16.5 NA chr15 45430652 45441808 - 11157 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-519G16.5 NA 0.012 10-20% Colon 2.737168122 Normal NA NA boxplot RP5-855D21.2 NA chr8 237045 237669 + 625 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-855D21.2 NA 0.035 80-90% NA NA CRC,Normal NA NA boxplot CTC-559E9.6 NA chr19 19776602 19836073 + 59472 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-559E9.6 NA 0.718 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down) NA boxplot RP11-527L4.5 NA chr17 43914433 43923001 - 8569 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-527L4.5 NA 0.129 70-80% Testis 4.23738212 CRC,HCC,Normal,PAAD NA NA boxplot RP11-709A23.1 NA chr12 27547050 27552773 - 5724 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-709A23.1 NA 0.071 60-70% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot CTD-2291D10.4 NA chr19 23075201 23100361 + 25161 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2291D10.4 NA 0.082 80-90% Testis 2.111548808 Breast_cancer,HCC,Normal NA NA boxplot MTCO2P33 MT-CO2 pseudogene 33 chr6 24947880 24948344 + 465 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MTCO2P33 NA 0.012 20-30% NA NA Normal NA NA boxplot RP11-368N21.5 NA chr16 29595130 29596137 - 1008 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-368N21.5 NA 0.118 50-60% NA NA CRC,HCC,Normal NA NA boxplot RP11-265N6.1 NA chr15 42531867 42532840 - 974 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-265N6.1 NA 0.353 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot RP11-506K19.1 NA chr14 38835389 38835788 + 400 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-506K19.1 NA 0.035 80-90% NA NA Normal NA NA boxplot GAPDHP14 glyceraldehyde-3-phosphate dehydrogenase pseudogene 14 chr21 29222321 29223257 + 937 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GAPDHP14 NA 0.2 50-60% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-705O1.8 NA chr18 268148 270278 + 2131 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-705O1.8 NA 0.082 60-70% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot RP11-196G18.23 NA chr1 149861271 149862504 + 1234 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-196G18.23 NA 0.259 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-71E19.2 NA chr3 126288867 126294024 - 5158 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-71E19.2 NA 0.012 50-60% NA NA Breast_cancer NA NA boxplot RP11-589F5.4 NA chr5 70751184 70795914 + 44731 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-589F5.4 NA 0.906 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(up),HCC(up),PAAD(up) NA boxplot GCC2-AS1 GCC2 antisense RNA 1 chr2 108507515 108534196 - 26682 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GCC2-AS1 NA 0.082 70-80% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot RP11-346C20.4 NA chr16 73060245 73060759 + 515 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-346C20.4 NA 0.2 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CTA-243E7.2 NA chr22 25048967 25051966 - 3000 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTA-243E7.2 NA 0.012 20-30% NA NA Breast_cancer,HCC NA NA boxplot RP11-340I6.8 NA chr7 63900823 63917994 + 17172 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-340I6.8 NA 0.094 10-20% Testis 2.626401724 Breast_cancer,HCC,Normal,PAAD NA NA boxplot RP1-256G22.2 NA chr6 5664985 5695272 - 30288 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-256G22.2 NA 0.024 70-80% NA NA CRC,Normal NA NA boxplot FAM86B3P family with sequence similarity 86, member A pseudogene chr8 8228595 8244865 + 16271 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FAM86B3P NA 0.4 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot MIR19B2 microRNA 19b-2 chrX 134168911 134174089 - 5179 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MIR19B2 NA 0.012 80-90% NA NA Breast_cancer,PAAD NA NA boxplot RP11-168O22.1 NA chr10 55247755 55597233 - 349479 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-168O22.1 NA 0.224 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CTB-127C13.1 NA chr5 160195744 160204826 - 9083 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTB-127C13.1 NA 0.271 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RPS3AP6 ribosomal protein S3A pseudogene 6 chr15 59768352 59769146 + 795 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPS3AP6 NA 1 0-10% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP5-968P14.2 NA chr1 26692132 26694131 - 2000 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-968P14.2 NA 0.212 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot VN1R66P vomeronasal 1 receptor 66 pseudogene chr16 31648307 31649222 + 916 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=VN1R66P NA 0.012 40-50% NA NA Breast_cancer,Normal NA NA boxplot TOP3BP1 topoisomerase (DNA) III beta pseudogene 1 chr22 22223187 22224566 - 1380 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TOP3BP1 NA 0.165 80-90% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CYP2D8P ccytochrome P450 family 2 subfamily D member 8, pseudogene chr22 42149886 42155001 - 5116 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CYP2D8P NA 0.118 50-60% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot AF254982.2 NA chr21 10640028 10640338 - 311 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AF254982.2 NA 0.012 90-100% Testis 4.906892038 Normal NA NA boxplot ABC12-47964100C23.1 NA chr9 40481559 40497591 - 16033 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ABC12-47964100C23.1 NA 0.059 90-100% NA NA CRC,HCC,Normal,PAAD NA NA boxplot PTMAP3 prothymosin, alpha pseudogene 3 chr20 18011955 18012284 + 330 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PTMAP3 NA 0.024 70-80% NA NA Normal,PAAD NA NA boxplot RP11-411B10.7 NA chr18 14010054 14010917 + 864 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-411B10.7 NA 0.024 40-50% NA NA PAAD NA NA boxplot AC079779.4 NA chr2 286419 301515 + 15097 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC079779.4 NA 0.071 40-50% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot CTC-268N12.3 NA chr17 37034668 37043252 + 8585 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-268N12.3 NA 0.059 50-60% NA NA Breast_cancer,CRC,Normal,PAAD NA NA boxplot AC007246.3 NA chr2 39436637 39665343 + 228707 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC007246.3 NA 0.847 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),PAAD(up) NA boxplot CTBP1-AS CTBP1 antisense RNA chr4 1210120 1218591 + 8472 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTBP1-AS NA 0.894 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down) NA boxplot LDHAP3 lactate dehydrogenase A pseudogene 3 chr2 41819747 41820754 + 1008 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LDHAP3 NA 0.024 80-90% Pituitary 4.906892038 HCC,Normal NA NA boxplot CTB-49A3.2 uncharacterized LOC105379181 chr5 133160438 133224413 + 63976 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTB-49A3.2 NA 0.012 20-30% Testis 3.461148717 Normal,PAAD NA NA boxplot RP11-582E3.2 NA chr12 27105151 27161393 - 56243 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-582E3.2 NA 0.035 10-20% Testis 4.906892038 Normal NA NA boxplot RP11-359B12.2 NA chr12 974133 991190 - 17058 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-359B12.2 NA 0.471 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot HMGN1P4 high mobility group nucleosome binding domain 1 pseudogene 4 chr1 182942115 182942404 - 290 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HMGN1P4 NA 0.141 70-80% NA NA Breast_cancer,CHD,HCC,Normal,PAAD NA NA boxplot DLG5-AS1 DLG5 antisense RNA 1 chr10 77927372 77929824 + 2453 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DLG5-AS1 NA 0.071 20-30% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot RP11-421M1.8 NA chr6 10743324 10747663 - 4340 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-421M1.8 NA 0.235 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-383F6.1 NA chr7 139049456 139050006 - 551 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-383F6.1 NA 0.235 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot LINC01095 long intergenic non-protein coding RNA 1095 chr4 146109455 146121913 - 12459 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01095 NA 0.035 30-40% NA NA Breast_cancer,CRC,PAAD NA NA boxplot RP11-59H7.1 NA chr15 59049399 59050385 - 987 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-59H7.1 NA 0.012 60-70% NA NA CRC NA NA boxplot RPL23AP45 ribosomal protein L23a pseudogene 45 chr5 181471963 181472430 + 468 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL23AP45 NA 0.188 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-543B16.1 NA chr1 211173488 211173849 + 362 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-543B16.1 NA 0.882 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-127L20.5 NA chr10 104312141 104313881 + 1741 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-127L20.5 NA 0.035 80-90% NA NA CRC,HCC NA NA boxplot ELL2P1 elongation factor, RNA polymerase II, 2 pseudogene 1 chr1 158175850 158177755 - 1906 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ELL2P1 NA 0.824 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot PGAM1P11 phosphoglycerate mutase 1 pseudogene 11 chr1 10058671 10059648 + 978 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PGAM1P11 NA 0.059 30-40% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot AP001596.6 NA chr21 26378552 26471698 + 93147 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AP001596.6 NA 0.165 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot HNRNPA1P30 heterogeneous nuclear ribonucleoprotein A1 pseudogene 30 chr13 20938564 20949599 - 11036 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HNRNPA1P30 NA 0.012 90-100% Testis 4.906892038 Breast_cancer,HCC,Normal,PAAD NA NA boxplot AC073409.1 NA chr2 123443266 123444445 - 1180 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC073409.1 NA 0.094 40-50% NA NA CRC,Normal,PAAD NA NA boxplot RP5-899E9.1 NA chr7 77416673 77425443 + 8771 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-899E9.1 NA 0.235 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot LPAL2 lipoprotein, Lp(a)-like 2, pseudogene chr6 160453428 160511124 - 57697 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LPAL2 NA 0.6 10-20% Liver 1.728894752 Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down) NA boxplot CTD-2005H7.1 NA chr11 86703099 86714092 + 10994 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2005H7.1 NA 0.176 10-20% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-125H8.1 NA chr14 67199062 67200327 + 1266 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-125H8.1 NA 0.059 90-100% Testis 3.909912525 CRC,HCC,Normal,PAAD NA NA boxplot RP11-609N14.4 NA chr16 10445309 10449747 - 4439 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-609N14.4 NA 0.059 0-10% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot RP11-341G23.4 NA chr12 103746315 103768858 - 22544 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-341G23.4 exo_circ_045375 0.035 50-60% NA NA HCC NA NA boxplot RP11-448G4.2 NA chr1 197735636 197736107 + 472 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-448G4.2 NA 0.012 80-90% Testis 4.906892038 CRC,Normal NA NA boxplot RP11-160C18.4 NA chr15 78752107 78753373 + 1267 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-160C18.4 NA 0.012 90-100% Testis 4.906892038 Breast_cancer,HCC NA NA boxplot RP11-371A19.2 NA chr10 23343957 23345181 + 1225 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-371A19.2 NA 0.035 80-90% Lung 1.755876501 CRC,HCC,Normal NA NA boxplot RP11-214D15.2 NA chr10 13528516 13530262 + 1747 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-214D15.2 NA 0.024 50-60% Testis 4.31510627 Breast_cancer,Normal NA NA boxplot GRTP1-AS1 GRTP1 antisense RNA 1 chr13 113351673 113361868 + 10196 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GRTP1-AS1 NA 0.235 40-50% Adrenal Gland 1.023886916 Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot IGBP1P1 immunoglobulin (CD79A) binding protein 1 pseudogene 1 chr14 34939324 34940332 + 1009 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=IGBP1P1 NA 0.353 70-80% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot CTB-147N14.6 NA chr19 46787815 46789043 + 1229 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTB-147N14.6 NA 0.482 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot RP11-247L20.3 NA chr14 50397013 50398345 + 1333 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-247L20.3 NA 0.212 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot OR5AO1P olfactory receptor family 5 subfamily AO member 1 pseudogene chr11 57045091 57045390 + 300 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=OR5AO1P NA 0.106 10-20% Spleen 4.828850156 CRC,Normal NA NA boxplot RP4-681N20.5 NA chr20 3921279 3923400 - 2122 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-681N20.5 NA 0.141 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP5-884G6.2 NA chr1 99968383 99969864 - 1482 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-884G6.2 NA 0.235 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-53B2.1 NA chr18 13471012 13472709 - 1698 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-53B2.1 NA 0.024 20-30% Testis 4.058520966 Breast_cancer,Normal NA NA boxplot MIR1302-9 microRNA 1302-9 chr9 27657 30891 + 3235 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MIR1302-9 NA 0.012 80-90% NA NA Breast_cancer,HCC,PAAD NA NA boxplot BGLT3 beta globin locus transcript 3 (non-protein coding) chr11 5244554 5245547 - 994 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=BGLT3 NA 0.024 50-60% NA NA CRC,PAAD NA NA boxplot HNRNPA1P10 heterogeneous nuclear ribonucleoprotein A1 pseudogene 10 chr19 11666069 11667030 - 962 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HNRNPA1P10 NA 1 0-10% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot ALOX12-AS1 ALOX12 antisense RNA 1 chr17 6876635 7012349 - 135715 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ALOX12-AS1 NA 0.882 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down) NA boxplot AC007229.3 NA chr19 10841839 10842250 + 412 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC007229.3 NA 0.306 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CTC-277H1.6 NA chr16 67205175 67206849 - 1675 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-277H1.6 exo_circ_017181 0.035 70-80% NA NA Breast_cancer,CRC,HCC,PAAD NA NA boxplot ISCA2P1 iron-sulfur cluster assembly 2 pseudogene 1 chr22 26644889 26645336 - 448 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ISCA2P1 NA 0.024 60-70% Pituitary 2.657351374 Breast_cancer,CRC,HCC NA NA boxplot GS1-124K5.10 NA chr7 66511556 66545066 + 33511 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GS1-124K5.10 NA 0.024 90-100% NA NA Breast_cancer,CRC,PAAD NA NA boxplot TTTY10 testis-specific transcript, Y-linked 10 (non-protein coding) chrY 20465668 20519228 - 53561 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TTTY10 NA 0.424 10-20% NA NA CHD,CRC,HCC,Normal,PAAD CHD(up) NA boxplot AP003774.4 NA chr11 64449074 64451657 + 2584 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AP003774.4 NA 0.506 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-166A12.1 NA chr5 122628952 122730685 - 101734 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-166A12.1 NA 0.047 10-20% Testis 4.536536594 Normal NA NA boxplot CTD-2538G9.3 NA chr19 16712317 16712434 + 118 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2538G9.3 NA 0.012 80-90% NA NA NA NA NA boxplot MIR302B microRNA 302b chr4 112646476 112650051 - 3576 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MIR302B NA 0.271 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot KLF2P2 Kruppel-like factor 2 pseudogene 2 chr2 130427731 130429225 + 1495 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KLF2P2 NA 0.047 50-60% NA NA Breast_cancer,CRC,Normal NA NA boxplot RP11-40F6.1 NA chr10 80233664 80245367 + 11704 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-40F6.1 NA 0.012 70-80% Testis 2.259628121 NA NA NA boxplot LINC00969 long intergenic non-protein coding RNA 969 chr3 195658062 195739964 + 81903 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00969 exo_circ_052661 1 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down) NA boxplot LINC00865 long intergenic non-protein coding RNA 865 chr10 89829510 89840861 + 11352 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00865 NA 0.365 40-50% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot HMGB1P44 high mobility group box 1 pseudogene 44 chr4 77963940 77964511 + 572 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HMGB1P44 NA 0.024 60-70% NA NA PAAD NA NA boxplot RP11-462G2.2 NA chr6 70412828 70413950 - 1123 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-462G2.2 NA 0.012 30-40% Testis 4.681139873 Breast_cancer NA NA boxplot LA16c-429E7.1 NA chr16 1841020 1843547 - 2528 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LA16c-429E7.1 NA 0.012 80-90% NA NA Normal NA NA boxplot RP11-656D10.7 NA chr1 40473055 40474059 + 1005 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-656D10.7 NA 0.071 10-20% NA NA CRC,Normal,PAAD NA NA boxplot CTC-455F18.3 NA chr5 170896929 170904461 + 7533 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-455F18.3 NA 0.035 10-20% NA NA Breast_cancer,HCC,Normal NA NA boxplot GTF2IP13 NA chr7 45769105 45815263 + 46159 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GTF2IP13 NA 0.471 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD PAAD(up) NA boxplot RP5-857K21.4 NA chr1 585989 827796 - 241808 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-857K21.4 NA 0.176 70-80% NA NA CRC,HCC,Normal,PAAD NA NA boxplot AC010226.4 NA chr5 115602057 115620659 + 18603 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC010226.4 NA 0.859 10-20% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(down) NA boxplot NDUFB9P2 NADH:ubiquinone oxidoreductase subunit B9 pseudogene 2 chr7 131753746 131754252 - 507 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NDUFB9P2 NA 0.012 90-100% NA NA Normal NA NA boxplot AC009095.4 NA chr16 67614381 67616146 - 1766 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC009095.4 NA 0.012 0-10% NA NA Normal,PAAD NA NA boxplot CTD-2561B21.11 NA chr17 81017969 81020011 - 2043 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2561B21.11 NA 0.247 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-77K12.9 NA chr16 75433836 75436392 + 2557 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-77K12.9 NA 0.424 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot DLG3-AS1 DLG3 antisense RNA 1 chrX 70452958 70455994 - 3037 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DLG3-AS1 NA 0.012 10-20% NA NA PAAD NA NA boxplot RP11-775G23.1 NA chr18 65606090 65652053 + 45964 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-775G23.1 NA 0.012 70-80% Testis 4.018231127 Breast_cancer,Normal NA NA boxplot CTB-113P19.5 NA chr5 151724831 151725356 - 526 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTB-113P19.5 NA 0.329 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-173P15.3 NA chr12 120697124 120699541 - 2418 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-173P15.3 NA 0.318 70-80% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-1060J15.5 NA chr12 27702338 27702906 + 569 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1060J15.5 NA 0.035 60-70% NA NA HCC NA NA boxplot CTD-2013N17.7 NA chr19 16352462 16353182 - 721 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2013N17.7 NA 0.024 80-90% NA NA CRC,HCC NA NA boxplot RP11-335L23.5 NA chr4 183094423 183095056 - 634 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-335L23.5 NA 0.094 30-40% Testis 1.005605609 HCC,Normal,PAAD NA NA boxplot FLJ31356 uncharacterized protein FLJ31356 chr2 28384409 28394672 - 10264 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FLJ31356 NA 0.094 30-40% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot AC013264.2 NA chr2 197197991 197199273 + 1283 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC013264.2 NA 0.541 20-30% NA NA CRC,HCC,Normal,PAAD CHD(down),HCC(down),PAAD(down) NA boxplot RP11-305M3.2 NA chr7 129410113 129410370 - 258 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-305M3.2 NA 0.929 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down),HCC(up),PAAD(up) NA boxplot RP11-10N23.5 NA chr8 93741193 93744534 + 3342 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-10N23.5 NA 0.176 30-40% Testis 3.342258911 CRC,HCC,Normal,PAAD NA NA boxplot CTD-2357A8.2 NA chr17 78691266 78691979 - 714 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2357A8.2 NA 0.165 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CTD-2589M5.5 NA chr11 46238382 46239267 + 886 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2589M5.5 NA 0.071 50-60% NA NA CRC,Normal NA NA boxplot RP11-326C3.15 NA chr11 333192 333688 + 497 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-326C3.15 NA 0.082 50-60% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot RP11-246A10.1 NA chr3 152118173 152151724 - 33552 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-246A10.1 exo_circ_012504,exo_circ_001549,exo_circ_031617 0.176 40-50% Cervix 2.318550481 CRC,HCC,Normal,PAAD NA NA boxplot AC010468.1 NA chr5 111192226 111193042 - 817 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC010468.1 NA 0.929 10-20% NA NA CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP1-43E13.2 NA chr1 19210501 19240704 + 30204 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-43E13.2 NA 0.541 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-805I24.1 NA chr16 86081409 86089526 - 8118 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-805I24.1 NA 0.012 80-90% Testis 4.906892038 Breast_cancer,PAAD NA NA boxplot AC002486.3 NA chr7 20641558 20641948 - 391 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC002486.3 exo_circ_050019 0.329 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot KB-1958F4.1 NA chr8 97144170 97144723 + 554 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KB-1958F4.1 exo_circ_050289 0.118 50-60% NA NA CRC,HCC,Normal NA NA boxplot AC004549.6 NA chr7 27733064 27740395 - 7332 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC004549.6 NA 0.059 70-80% Testis 2.793292656 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-492E3.2 NA chr9 129575409 129584556 + 9148 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-492E3.2 NA 0.059 30-40% Prostate 1.504804892 Breast_cancer,HCC,Normal,PAAD NA NA boxplot RSL24D1P1 ribosomal L24 domain containing 1 pseudogene 1 chr6 27780619 27781111 - 493 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RSL24D1P1 NA 0.047 90-100% Testis 3.981184086 HCC,Normal NA NA boxplot RP11-524C21.2 NA chr6 22220781 22222395 + 1615 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-524C21.2 NA 0.012 90-100% NA NA Breast_cancer,CRC,Normal NA NA boxplot AC007193.9 NA chr19 46382492 46383169 - 678 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC007193.9 NA 0.012 80-90% NA NA HCC NA NA boxplot RP11-471B22.2 NA chr14 90402523 90405235 - 2713 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-471B22.2 NA 0.224 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot NPM1P25 nucleophosmin 1 (nucleolar phosphoprotein B23, numatrin) pseudogene 25 chr10 96189366 96190219 - 854 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NPM1P25 NA 0.835 0-10% NA NA CHD,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down) NA boxplot RP3-510L9.1 NA chr6 11173452 11259099 + 85648 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-510L9.1 NA 0.047 70-80% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot DEFA8P defensin alpha 8, pseudogene chr8 6950726 6951599 - 874 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DEFA8P NA 0.235 10-20% Whole Blood 3.786681305 Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up) NA boxplot RP13-895J2.3 NA chr12 132277349 132280900 + 3552 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP13-895J2.3 NA 0.047 50-60% NA NA Breast_cancer,HCC,PAAD NA NA boxplot CTD-2233K9.1 NA chr19 46946535 46949156 + 2622 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2233K9.1 NA 0.259 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-550I24.3 NA chr3 157230320 157231208 - 889 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-550I24.3 NA 0.012 90-100% Pituitary 2.6076518 NA NA NA boxplot GS1-257G1.1 NA chrX 14244382 14244928 + 547 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GS1-257G1.1 NA 0.929 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down),HCC(down) NA boxplot AC104532.3 NA chr19 5899895 5901511 + 1617 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC104532.3 NA 0.035 50-60% NA NA HCC,Normal NA NA boxplot MSTO2P misato family member 2, pseudogene chr1 155745829 155750137 + 4309 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MSTO2P NA 0.788 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up),CRC(up),HCC(up),PAAD(up) NA boxplot RP1-167O22.1 NA chr20 21569976 21619674 + 49699 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-167O22.1 NA 0.176 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-627D16.1 NA chr15 46693288 46804844 + 111557 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-627D16.1 NA 0.012 90-100% Artery 4.840218386 CRC NA NA boxplot ACTN1-AS1 ACTN1 antisense RNA 1 chr14 68979682 68987463 + 7782 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ACTN1-AS1 NA 0.341 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC019330.1 NA chr2 198493242 198772356 - 279115 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC019330.1 NA 0.012 90-100% Colon 4.906892038 Normal NA NA boxplot ZNF341-AS1 ZNF341 antisense RNA 1 chr20 33787373 33811097 - 23725 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ZNF341-AS1 NA 0.106 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot TCL6 T-cell leukemia/lymphoma 6 (non-protein coding) chr14 95650498 95679833 + 29336 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TCL6 NA 0.824 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot HSPA7 heat shock protein family A (Hsp70) member 7 chr1 161606291 161608217 + 1927 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HSPA7 NA 0.847 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CRC(up),PAAD(up) NA boxplot RP11-141J10.2 NA chr9 70726040 70730856 + 4817 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-141J10.2 NA 0.012 70-80% NA NA HCC,PAAD NA NA boxplot RP13-476E20.1 NA chr6 53790875 53794274 - 3400 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP13-476E20.1 NA 0.024 20-30% NA NA Breast_cancer,HCC NA NA boxplot RP11-153K16.1 NA chr12 23099368 23191587 + 92220 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-153K16.1 NA 0.012 10-20% Pituitary 4.104443531 HCC NA NA boxplot CTD-2245F17.6 NA chr19 53240675 53241913 + 1239 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2245F17.6 NA 0.047 30-40% NA NA HCC,Normal,PAAD NA NA boxplot RPL39P ribosomal protein L39 pseudogene chr20 56459428 56459583 - 156 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL39P NA 0.518 40-50% Lung 1.352456233 CHD,CRC,HCC,Normal,PAAD NA NA boxplot LIN28AP1 LIN28A pseudogene 1 chr2 183260642 183261046 + 405 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LIN28AP1 NA 0.035 60-70% NA NA Breast_cancer,CRC NA NA boxplot RP11-436K8.1 NA chr1 60659631 60867998 - 208368 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-436K8.1 NA 0.153 50-60% Spleen 1.410048866 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC005262.2 NA chr19 3121116 3122128 - 1013 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC005262.2 NA 0.188 80-90% NA NA CRC,HCC,Normal NA NA boxplot SEPT14P2 NA chr2 242122287 242122469 + 183 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SEPT14P2 NA 0.271 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-277K23.1 NA chr11 38618264 38646356 - 28093 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-277K23.1 exo_circ_037408,exo_circ_045285 0.012 30-40% Testis 4.906892038 CRC NA NA boxplot RP11-32B5.8 NA chr15 21368459 21370621 + 2163 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-32B5.8 NA 0.012 40-50% NA NA Breast_cancer,HCC,Normal NA NA boxplot RPL35AP19 ribosomal protein L35a pseudogene 19 chr8 121380137 121380465 - 329 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL35AP19 NA 0.035 90-100% NA NA CRC,HCC NA NA boxplot ANXA2P1 annexin A2 pseudogene 1 chr4 153307792 153308717 - 926 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ANXA2P1 NA 0.776 50-60% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot AC069513.4 NA chr3 195655565 195657927 - 2363 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC069513.4 NA 0.012 90-100% NA NA Breast_cancer,HCC,Normal NA NA boxplot CYCSP26 cytochrome c, somatic pseudogene 26 chr11 58005386 58005705 + 320 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CYCSP26 NA 0.012 80-90% NA NA Normal NA NA boxplot ATP5F1P1 ATP synthase, H+ transporting, mitochondrial Fo complex subunit B1 pseudogene 1 chr13 51598416 51599460 + 1045 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ATP5F1P1 NA 0.106 80-90% NA NA CRC,Normal,PAAD NA NA boxplot MCF2L-AS1 MCF2L antisense RNA 1 chr13 112967484 112968824 - 1341 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MCF2L-AS1 NA 0.247 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CASP1P2 caspase 1 pseudogene 2 chr11 105063345 105071541 - 8197 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CASP1P2 NA 0.094 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CTD-2008A1.1 NA chr15 44826540 44827094 + 555 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2008A1.1 NA 0.035 80-90% NA NA HCC,Normal,PAAD NA NA boxplot RP11-73K9.3 NA chr4 112272968 112273316 - 349 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-73K9.3 NA 0.188 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RPSAP26 ribosomal protein SA pseudogene 26 chr2 62146413 62147153 + 741 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPSAP26 NA 0.694 70-80% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-2I17.4 NA chr15 72140504 72155459 - 14956 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-2I17.4 NA 0.024 80-90% NA NA Breast_cancer,HCC,Normal NA NA boxplot CH17-373J23.1 NA chr1 145281116 145281462 + 347 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CH17-373J23.1 NA 0.165 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CTD-2525I3.2 NA chr19 52171158 52177002 + 5845 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2525I3.2 NA 0.047 40-50% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot CTB-17P3.4 NA chr5 151158106 151158462 - 357 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTB-17P3.4 NA 0.012 80-90% NA NA CRC NA NA boxplot RP11-259P15.4 NA chr3 180772750 180773914 - 1165 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-259P15.4 NA 0.012 20-30% Ovary 1.093058393 HCC NA NA boxplot AC004791.2 NA chr19 15851993 15864904 - 12912 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC004791.2 NA 0.012 70-80% NA NA CRC NA NA boxplot GCOM2 GRINL1B complex locus 2 (pseudogene) chr4 68038544 68039647 + 1104 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GCOM2 NA 0.835 20-30% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down),PAAD(down) NA boxplot CTA-256D12.11 NA chr22 29513889 29535390 - 21502 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTA-256D12.11 NA 0.035 70-80% NA NA CRC,Normal NA NA boxplot RP11-177H13.2 NA chr8 23336171 23366125 + 29955 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-177H13.2 NA 0.106 80-90% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-320N7.1 NA chr12 4109661 4118132 - 8472 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-320N7.1 NA 0.035 20-30% NA NA Breast_cancer,CRC,Normal NA NA boxplot C5orf66 chromosome 5 open reading frame 66 chr5 135033280 135358219 + 324940 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=C5orf66 NA 0.318 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-10N23.2 NA chr8 93719574 93721167 + 1594 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-10N23.2 NA 0.082 50-60% NA NA HCC,Normal,PAAD NA NA boxplot RP11-73M18.6 NA chr14 103687576 103688127 + 552 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-73M18.6 NA 0.165 20-30% NA NA CRC,Normal,PAAD NA NA boxplot AC140481.8 NA chr2 130743538 130755879 - 12342 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC140481.8 NA 0.012 50-60% Pituitary 3.763607105 Breast_cancer,HCC NA NA boxplot KRT8P47 keratin 8 pseudogene 47 chr1 44103306 44104703 - 1398 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KRT8P47 NA 0.035 70-80% NA NA Breast_cancer,CRC,Normal NA NA boxplot AC092168.2 NA chr2 100822661 100847220 + 24560 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC092168.2 NA 0.035 10-20% NA NA Normal,PAAD NA NA boxplot RP11-439C8.2 NA chr3 154969283 154970223 - 941 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-439C8.2 NA 0.024 80-90% Testis 4.235013751 CRC,Normal NA NA boxplot RP11-803P9.1 NA chr3 197789700 197790369 + 670 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-803P9.1 NA 0.035 60-70% NA NA CRC,PAAD NA NA boxplot OR7E108P olfactory receptor family 7 subfamily E member 108 pseudogene chr9 90751240 90752230 - 991 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=OR7E108P NA 0.035 90-100% NA NA Breast_cancer,HCC,Normal NA NA boxplot RP11-263J14.1 NA chr4 26070754 26104258 + 33505 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-263J14.1 NA 0.012 90-100% NA NA CRC NA NA boxplot CH17-174L20.1 NA chr8 2517898 2529710 - 11813 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CH17-174L20.1 exo_circ_039297 0.024 70-80% NA NA CRC,PAAD NA NA boxplot RP11-415J8.3 NA chr1 33307348 33349245 + 41898 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-415J8.3 NA 0.059 30-40% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot HIST2H2BB histone cluster 2, H2bb (pseudogene) chr1 143875171 143904650 - 29480 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HIST2H2BB NA 0.906 20-30% NA NA CHD,CRC,HCC,Normal,PAAD CHD(up),CRC(up) NA boxplot GACAT3 gastric cancer associated transcript 3 (non-protein coding) chr2 16050427 16085801 + 35375 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GACAT3 NA 0.012 80-90% NA NA PAAD NA NA boxplot RP11-290L7.3 NA chr9 39173794 39174513 - 720 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-290L7.3 NA 0.012 60-70% NA NA NA NA NA boxplot RP5-963E22.5 NA chr20 63127495 63129459 - 1965 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-963E22.5 NA 0.012 50-60% Testis 4.88345498 Breast_cancer,Normal NA NA boxplot COX4I1P2 cytochrome c oxidase subunit IV isoform 1 pseudogene 2 chr13 45671845 45672391 + 547 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=COX4I1P2 NA 0.012 90-100% NA NA Breast_cancer NA NA boxplot AC106786.1 NA chr5 123087248 123090299 - 3052 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC106786.1 NA 0.024 40-50% NA NA Breast_cancer,HCC NA NA boxplot TPRKBP2 TP53RK binding protein pseudogene 2 chr16 28111173 28111647 - 475 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TPRKBP2 NA 0.082 50-60% Whole Blood 2.166751434 CRC,Normal,PAAD NA NA boxplot RP11-520B13.8 NA chr9 97151894 97152694 - 801 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-520B13.8 NA 0.071 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot TAS2R15P taste 2 receptor member 15 pseudogene chr12 10964425 10965352 - 928 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TAS2R15P NA 0.071 50-60% NA NA CRC,Normal,PAAD NA NA boxplot RP11-351I24.3 NA chr11 10272052 10272259 - 208 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-351I24.3 exo_circ_010733 0.741 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot LINC00402 long intergenic non-protein coding RNA 402 chr13 74231457 74259976 + 28520 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00402 NA 0.694 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),PAAD(down) NA boxplot RP3-442L6.4 NA chr6 49721931 49724007 + 2077 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-442L6.4 NA 0.024 70-80% NA NA Normal NA NA boxplot CTD-2532K18.2 NA chr5 174820027 174826324 + 6298 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2532K18.2 NA 0.012 10-20% Testis 4.444620616 PAAD NA NA boxplot RP11-249L21.4 NA chr6 108907615 108907873 - 259 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-249L21.4 NA 0.035 70-80% NA NA HCC,Normal NA NA boxplot RP11-365P13.6 NA chr13 110952722 110952811 - 90 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-365P13.6 NA 0.012 10-20% NA NA HCC NA NA boxplot LINC00616 long intergenic non-protein coding RNA 616 chr4 138027422 138130709 - 103288 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00616 NA 0.012 50-60% Testis 4.852100943 HCC NA NA boxplot RP11-419C23.1 NA chr8 37067441 37069418 - 1978 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-419C23.1 NA 0.024 50-60% NA NA PAAD NA NA boxplot RP11-327F22.1 NA chr16 50727417 50742815 - 15399 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-327F22.1 NA 0.729 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot RP11-299H22.3 NA chr15 62227896 62253235 - 25340 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-299H22.3 NA 0.012 10-20% NA NA Breast_cancer NA NA boxplot CTD-2323K18.3 NA chr15 75480661 75480836 + 176 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2323K18.3 NA 0.024 80-90% Testis 4.906892038 Normal NA NA boxplot FAM96AP1 family with sequence similarity 96, member A pseudogene 1 chr3 28427963 28428444 - 482 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FAM96AP1 NA 0.012 20-30% NA NA HCC NA NA boxplot DLX6-AS1 DLX6 antisense RNA 1 chr7 96955141 97014065 - 58925 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DLX6-AS1 NA 0.024 30-40% Brain 2.1408237 Breast_cancer,PAAD NA NA boxplot RP11-156E6.1 NA chr17 41848518 41851447 - 2930 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-156E6.1 NA 0.918 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot CTD-2017D11.1 NA chr19 24033445 24066909 + 33465 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2017D11.1 NA 0.718 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down) NA boxplot RP11-122G18.12 NA chr1 161399409 161422424 + 23016 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-122G18.12 NA 0.706 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-12L8.2 NA chr1 115916497 115916699 + 203 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-12L8.2 NA 0.047 70-80% Brain 4.906892038 HCC,Normal NA NA boxplot RP11-355O1.11 NA chr9 122937623 122940333 + 2711 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-355O1.11 NA 0.529 10-20% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-5N19.3 NA chr15 56192353 56193262 - 910 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-5N19.3 NA 0.047 30-40% NA NA CRC,Normal NA NA boxplot LINC00877 long intergenic non-protein coding RNA 877 chr3 72035300 72279503 - 244204 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00877 exo_circ_042160 0.953 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down) NA boxplot MIR1302-2 microRNA 1302-2 chr1 29554 31109 + 1556 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MIR1302-2 NA 0.012 90-100% NA NA PAAD NA NA boxplot RP11-255M2.3 NA chr15 94841059 95169864 + 328806 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-255M2.3 NA 0.118 80-90% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-91I8.3 NA chr18 6728821 6729862 - 1042 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-91I8.3 NA 0.047 70-80% Testis 1.538247149 HCC,Normal NA NA boxplot RP11-182J1.12 NA chr15 84513241 84526949 - 13709 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-182J1.12 NA 0.765 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot LSM3P5 LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 5 chr16 78355529 78355834 + 306 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LSM3P5 NA 0.012 90-100% NA NA NA NA NA boxplot RP11-44B19.1 NA chr5 148970340 148970653 + 314 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-44B19.1 NA 0.035 50-60% NA NA CRC,HCC,Normal NA NA boxplot RP11-7F17.3 NA chr14 77069180 77076344 - 7165 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-7F17.3 NA 0.588 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD PAAD(up) NA boxplot AC004012.1 NA chr7 95471835 95473998 + 2164 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC004012.1 NA 0.024 90-100% NA NA Breast_cancer,CRC,HCC NA NA boxplot TPI1P1 triosephosphate isomerase 1 pseudogene 1 chr1 76699789 76700538 + 750 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TPI1P1 NA 0.976 0-10% NA NA CHD,CRC,HCC,Normal,PAAD CHD(up),HCC(up) NA boxplot SNRPEP4 small nuclear ribonucleoprotein polypeptide E pseudogene 4 chr19 5576660 5576938 - 279 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SNRPEP4 NA 1 0-10% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot AC008060.8 NA chr7 155421206 155457099 - 35894 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC008060.8 NA 0.024 40-50% Brain 4.275332904 PAAD NA NA boxplot ERVH48-1 endogenous retrovirus group 48 member 1 chr21 42916803 42925646 - 8844 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ERVH48-1 NA 0.035 40-50% NA NA Breast_cancer,HCC,Normal NA NA boxplot RP11-690J15.1 NA chr12 98113014 98292445 - 179432 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-690J15.1 NA 0.012 40-50% Testis 4.065529952 HCC,Normal NA NA boxplot RP11-91P24.1 NA chr11 77868722 77869195 - 474 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-91P24.1 NA 0.035 60-70% NA NA CRC,HCC,Normal NA NA boxplot TATDN2P1 TatD DNase domain containing 2 pseudogene 1 chrX 44283916 44286246 + 2331 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TATDN2P1 NA 0.2 40-50% Testis 4.739498031 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot LINC01411 long intergenic non-protein coding RNA 1411 chr5 174336295 174532457 + 196163 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01411 NA 0.059 10-20% NA NA Breast_cancer,HCC,PAAD NA NA boxplot RP11-487A2.1 NA chr13 91485793 91486870 + 1078 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-487A2.1 exo_circ_056871 0.071 60-70% NA NA HCC,Normal,PAAD NA NA boxplot CTC-345K18.2 NA chr5 150670658 150672390 - 1733 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-345K18.2 NA 0.024 80-90% NA NA HCC NA NA boxplot RP11-434E6.4 NA chr16 54290965 54292422 + 1458 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-434E6.4 NA 0.129 70-80% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-209D14.2 NA chr17 20008051 20009234 - 1184 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-209D14.2 NA 0.259 60-70% Testis 1.771679908 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CTD-2374C24.1 NA chr5 104917492 105246364 - 328873 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2374C24.1 NA 0.012 60-70% Testis 4.906892038 NA NA NA boxplot RP11-75C10.9 NA chr17 77469162 77472770 - 3609 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-75C10.9 NA 0.024 80-90% NA NA CRC,HCC NA NA boxplot AP000344.4 NA chr22 23446598 23460833 + 14236 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AP000344.4 NA 0.024 50-60% NA NA Breast_cancer,Normal,PAAD NA NA boxplot KIF9-AS1 KIF9 antisense RNA 1 chr3 47164497 47246601 + 82105 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KIF9-AS1 exo_circ_012442 0.6 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up) NA boxplot RP11-421L21.2 NA chr1 100995473 100996260 + 788 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-421L21.2 NA 0.082 50-60% NA NA CRC,HCC,Normal NA NA boxplot AC005336.5 NA chr19 15902300 15903238 - 939 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC005336.5 NA 0.035 80-90% Prostate 2.776038994 Breast_cancer,Normal NA NA boxplot RP11-57G22.1 NA chr18 32779039 32779286 + 248 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-57G22.1 NA 0.012 0-10% Thyroid 3.433983915 HCC NA NA boxplot RP11-73M18.10 NA chr14 103694516 103695050 - 535 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-73M18.10 NA 0.106 20-30% NA NA HCC,Normal,PAAD NA NA boxplot ZNF876P zinc finger protein 876, pseudogene chr4 212610 255985 + 43376 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ZNF876P exo_circ_007176,exo_circ_003808 0.882 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-356J5.13 NA chr11 112260265 112261396 + 1132 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-356J5.13 NA 0.024 80-90% NA NA CRC NA NA boxplot RP11-699C17.1 NA chr18 50256036 50256461 - 426 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-699C17.1 NA 0.012 40-50% NA NA PAAD NA NA boxplot RP11-321A17.3 NA chr17 29021325 29021640 - 316 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-321A17.3 NA 0.024 70-80% Testis 4.906892038 Breast_cancer,HCC,Normal NA NA boxplot SEMA6A-AS1 SEMA6A antisense RNA 1 chr5 116447547 116508276 + 60730 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SEMA6A-AS1 exo_circ_010107 0.376 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-89H19.1 NA chr12 47882649 47901525 + 18877 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-89H19.1 NA 0.071 60-70% Whole Blood 3.069025778 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot STK19B serine/threonine kinase 19B (pseudogene) chr6 32013270 32013787 + 518 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=STK19B NA 0.388 30-40% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up) NA boxplot AC114730.2 NA chr2 241844380 241845036 + 657 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC114730.2 NA 0.035 30-40% NA NA Breast_cancer,HCC,Normal NA NA boxplot RP11-25E2.1 NA chr12 115077325 115080153 + 2829 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-25E2.1 NA 0.012 90-100% NA NA Breast_cancer,Normal NA NA boxplot RP11-830F9.7 NA chr16 88936779 88939651 - 2873 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-830F9.7 NA 0.2 40-50% Testis 1.302646156 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot MRPS18AP1 mitochondrial ribosomal protein S18A pseudogene 1 chr3 48256350 48256938 - 589 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MRPS18AP1 NA 0.047 20-30% NA NA Breast_cancer,CRC,Normal,PAAD NA NA boxplot AC013460.1 NA chr2 7421261 7450254 + 28994 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC013460.1 NA 0.412 10-20% Testis 2.125185078 Breast_cancer,CRC,HCC,Normal,PAAD PAAD(up) NA boxplot BEND7P1 BEN domain containing 7 pseudogene 1 chrX 102705784 102706240 + 457 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=BEND7P1 NA 0.035 50-60% NA NA CRC,PAAD NA NA boxplot RP11-88I18.2 NA chr9 68393881 68406500 - 12620 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-88I18.2 NA 0.329 70-80% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CTB-31N19.2 NA chr16 21532945 21550373 - 17429 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTB-31N19.2 NA 0.224 60-70% Testis 4.906892038 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-339B21.13 NA chr9 128316337 128316909 + 573 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-339B21.13 NA 0.153 70-80% NA NA CRC,HCC,Normal,PAAD NA NA boxplot LINC01591 long intergenic non-protein coding RNA 1591 chr8 135234131 135299719 + 65589 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01591 NA 0.012 10-20% NA NA Breast_cancer,Normal NA NA boxplot AC008073.9 NA chr2 24199839 24201698 - 1860 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC008073.9 NA 0.059 40-50% NA NA Breast_cancer,CRC,Normal,PAAD NA NA boxplot RPEP3 ribulose-5-phosphate-3-epimerase pseudogene 3 chr1 27739954 27740629 + 676 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPEP3 NA 0.024 80-90% Testis 4.034584087 Breast_cancer,Normal NA NA boxplot FDPSP4 farnesyl diphosphate synthase pseudogene 4 chr15 42939310 42940358 - 1049 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FDPSP4 NA 0.012 0-10% NA NA Breast_cancer,Normal,PAAD NA NA boxplot RP11-425D17.1 NA chr12 28185625 28186190 - 566 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-425D17.1 NA 0.082 60-70% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot RP11-262H14.5 NA chr9 62837748 62838372 - 625 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-262H14.5 NA 0.082 70-80% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-264J4.8 NA chr13 20092632 20094144 + 1513 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-264J4.8 NA 0.035 20-30% NA NA Breast_cancer,HCC,Normal NA NA boxplot AL109767.1 NA chr14 99262948 99264735 + 1788 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AL109767.1 NA 0.024 70-80% NA NA Breast_cancer,CRC,Normal NA NA boxplot HIST1H2APS3 histone cluster 1, H2a, pseudogene 3 chr6 26233122 26233255 + 134 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HIST1H2APS3 NA 0.035 80-90% NA NA HCC,Normal NA NA boxplot KCNH1-IT1 KCNH1 intronic transcript 1 chr1 211132588 211133374 - 787 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KCNH1-IT1 NA 0.012 60-70% Brain 1.655846457 HCC NA NA boxplot RP11-104F15.9 NA chr10 70434829 70436556 + 1728 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-104F15.9 NA 0.035 70-80% NA NA Breast_cancer,CRC,HCC NA NA boxplot MYL12AP1 myosin light chain 12A pseudogene 1 chr8 93849561 93850075 + 515 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MYL12AP1 NA 0.024 20-30% NA NA Normal NA NA boxplot HHIP-AS1 HHIP antisense RNA 1 chr4 144642922 144661357 - 18436 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HHIP-AS1 exo_circ_054486 0.247 20-30% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-328J2.1 NA chr7 119704556 119907375 - 202820 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-328J2.1 NA 0.094 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot LINC01287 long intergenic non-protein coding RNA 1287 chr7 153399920 153413963 - 14044 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01287 NA 0.012 60-70% NA NA Breast_cancer,HCC NA NA boxplot RP11-799M12.2 NA chr4 15563698 15564253 - 556 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-799M12.2 NA 0.141 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-529K1.2 NA chr16 70315640 70346747 - 31108 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-529K1.2 NA 0.4 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot ARMCX3-AS1 ARMCX3 antisense RNA 1 chrX 101622983 101624164 - 1182 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ARMCX3-AS1 NA 0.447 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot LINC01140 long intergenic non-protein coding RNA 1140 chr1 87129765 87169198 + 39434 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01140 NA 0.376 20-30% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-420A6.2 NA chr17 5364315 5371626 - 7312 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-420A6.2 NA 0.024 70-80% NA NA Breast_cancer,CRC,Normal NA NA boxplot RP11-245G13.2 NA chr2 10878269 10885118 + 6850 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-245G13.2 NA 0.035 80-90% Heart 3.341478981 Breast_cancer,CRC,HCC NA NA boxplot NPM1P24 nucleophosmin 1 (nucleolar phosphoprotein B23, numatrin) pseudogene 24 chr10 72917641 72918534 - 894 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NPM1P24 NA 0.259 80-90% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot AC023137.2 NA chr2 20451042 20452947 + 1906 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC023137.2 NA 0.012 80-90% NA NA Breast_cancer,CRC NA NA boxplot HCG4B HLA complex group 4B (non-protein coding) chr6 29925983 29926973 - 991 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HCG4B NA 0.176 80-90% NA NA CRC,HCC,Normal,PAAD NA NA boxplot AJ239321.3 NA chr21 13120244 13120807 + 564 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AJ239321.3 NA 0.012 70-80% NA NA NA NA NA boxplot XXbac-B562F10.11 NA chr22 20450122 20451824 + 1703 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=XXbac-B562F10.11 NA 0.129 80-90% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot RP11-379B18.5 NA chr3 125827238 125916384 - 89147 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-379B18.5 NA 0.447 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD PAAD(up) NA boxplot TRIM52-AS1 TRIM52 antisense RNA 1 (head to head) chr5 181261212 181272307 + 11096 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TRIM52-AS1 NA 1 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD PAAD(down) NA boxplot RP11-20I23.10 NA chr16 2578395 2579963 + 1569 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-20I23.10 NA 0.071 60-70% NA NA CRC,Normal,PAAD NA NA boxplot RP11-89B16.1 NA chr4 53899871 53916835 + 16965 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-89B16.1 NA 0.024 90-100% NA NA Normal NA NA boxplot POLR2KP1 polymerase (RNA) II (DNA directed) polypeptide K, 7.0kDa pseudogene 1 chr12 49594091 49594258 + 168 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=POLR2KP1 NA 0.012 20-30% NA NA CRC NA NA boxplot WWTR1-AS1 WWTR1 antisense RNA 1 chr3 149657020 149661364 + 4345 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=WWTR1-AS1 NA 0.376 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC005256.1 NA chr19 1748056 1748745 + 690 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC005256.1 NA 0.012 40-50% Stomach 4.282694098 Breast_cancer NA NA boxplot RP1-59D14.10 NA chr17 2366589 2366791 - 203 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-59D14.10 NA 0.012 80-90% NA NA NA NA NA boxplot RP11-822E23.2 NA chr17 21532974 21542786 + 9813 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-822E23.2 NA 0.012 90-100% Testis 4.564765923 Breast_cancer,PAAD NA NA boxplot RP11-83A24.1 NA chr4 139426299 139430884 - 4586 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-83A24.1 NA 0.129 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-143K11.5 NA chr17 73164977 73196593 + 31617 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-143K11.5 NA 0.012 30-40% NA NA Breast_cancer,HCC NA NA boxplot EFCAB14-AS1 EFCAB14 antisense RNA 1 chr1 46674036 46692098 + 18063 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=EFCAB14-AS1 NA 0.094 10-20% Testis 1.464597096 CRC,HCC,Normal,PAAD NA NA boxplot RP11-263F14.3 NA chr9 134868236 134868475 + 240 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-263F14.3 NA 0.012 60-70% Spleen 2.271313801 Breast_cancer,CRC NA NA boxplot CTD-2210P24.1 NA chr11 45722308 45744254 + 21947 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2210P24.1 NA 0.012 70-80% Testis 4.876429711 Breast_cancer,PAAD NA NA boxplot BCAS2P2 breast carcinoma amplified sequence 2 pseudogene 2 chr1 100393033 100394026 - 994 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=BCAS2P2 exo_circ_032421 0.671 10-20% NA NA CHD,CRC,HCC,Normal,PAAD PAAD(up) NA boxplot AC079741.2 NA chr7 112446164 112446375 - 212 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC079741.2 NA 0.012 80-90% NA NA Normal NA NA boxplot RP11-271K11.1 NA chr17 30553697 30558962 + 5266 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-271K11.1 NA 0.012 60-70% Testis 4.048425805 Breast_cancer,CRC NA NA boxplot AC135178.7 NA chr17 8318088 8318712 - 625 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC135178.7 NA 0.365 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot AL133243.2 NA chr2 32526504 32529507 + 3004 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AL133243.2 NA 0.353 10-20% NA NA CRC,HCC,Normal,PAAD NA NA boxplot ERICH6-AS1 ERICH6 antisense RNA 1 chr3 150703564 150720146 + 16583 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ERICH6-AS1 NA 0.788 10-20% NA NA CHD,CRC,HCC,Normal,PAAD CHD(down),HCC(down),PAAD(down) NA boxplot SEPSECS-AS1 SEPSECS antisense RNA 1 (head to head) chr4 25160641 25201440 + 40800 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SEPSECS-AS1 NA 0.882 0-10% NA NA CHD,CRC,HCC,Normal,PAAD CHD(down) NA boxplot LINC00885 long intergenic non-protein coding RNA 885 chr3 196142636 196160890 + 18255 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00885 exo_circ_016005 0.094 10-20% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot RP11-126F18.2 NA chr15 31453201 31454139 - 939 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-126F18.2 NA 0.024 90-100% Testis 3.513701858 Breast_cancer,Normal NA NA boxplot RP11-59H7.4 NA chr15 59115547 59116089 - 543 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-59H7.4 NA 0.035 80-90% NA NA CRC,HCC NA NA boxplot RP11-76C10.4 NA chr12 131022769 131024741 - 1973 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-76C10.4 NA 0.024 30-40% NA NA Breast_cancer,Normal,PAAD NA NA boxplot AC006116.13 NA chr19 56342432 56343419 - 988 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC006116.13 NA 0.024 0-10% Testis 1.813895828 Normal NA NA boxplot AC009518.4 NA chr7 131897641 131948953 + 51313 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC009518.4 NA 0.012 70-80% Testis 4.906892038 Breast_cancer,HCC NA NA boxplot RP11-939C17.4 NA chr11 75506937 75508391 - 1455 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-939C17.4 NA 0.012 70-80% Testis 4.906892038 Breast_cancer NA NA boxplot LINC00534 long intergenic non-protein coding RNA 534 chr8 90221488 90569318 + 347831 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00534 NA 0.835 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(up),PAAD(up) NA boxplot RAB6C-AS1 RAB6C antisense RNA 1 chr2 129966592 129980466 - 13875 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RAB6C-AS1 NA 0.129 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot ANO1-AS2 ANO1 antisense RNA 2 (head to head) chr11 70072434 70075433 - 3000 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ANO1-AS2 NA 0.012 60-70% Testis 4.41684228 Breast_cancer,HCC NA NA boxplot RP11-599B13.9 NA chr17 8063936 8072533 + 8598 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-599B13.9 NA 0.012 50-60% NA NA Breast_cancer,CRC NA NA boxplot RP11-423H2.4 NA chr5 177967004 177967457 + 454 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-423H2.4 NA 0.035 20-30% NA NA CRC NA NA boxplot AL022393.9 NA chr6 28170845 28172521 + 1677 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AL022393.9 NA 0.035 10-20% NA NA HCC,Normal NA NA boxplot CTC-527H23.3 NA chr16 48637143 48638719 + 1577 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-527H23.3 NA 0.012 30-40% NA NA Breast_cancer,CRC,Normal NA NA boxplot RP11-161D15.1 NA chr4 173897252 173929525 + 32274 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-161D15.1 NA 0.012 90-100% NA NA NA NA NA boxplot RPL4P4 ribosomal protein L4 pseudogene 4 chr3 185417495 185418778 - 1284 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL4P4 NA 1 0-10% NA NA CHD,CRC,HCC,Normal,PAAD CHD(up),CRC(down) NA boxplot AL157871.2 NA chr14 100279959 100291456 - 11498 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AL157871.2 NA 0.165 20-30% NA NA Normal NA NA boxplot RP11-380I10.4 NA chr8 28250063 28339255 - 89193 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-380I10.4 NA 0.224 50-60% NA NA Breast_cancer,CRC,Normal,PAAD NA NA boxplot CTB-92J24.2 NA chr19 23927788 23929287 + 1500 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTB-92J24.2 NA 0.094 50-60% NA NA HCC,Normal,PAAD NA NA boxplot RP11-618K13.2 NA chr11 45905941 45906461 - 521 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-618K13.2 NA 0.071 80-90% NA NA HCC,Normal,PAAD NA NA boxplot RP4-584D14.6 NA chr7 150379854 150383885 - 4032 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-584D14.6 NA 0.012 80-90% Testis 3.623964549 Breast_cancer,HCC NA NA boxplot AC004980.9 NA chr7 76524515 76532692 + 8178 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC004980.9 NA 0.259 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RAD23BP1 RAD23 homolog B, nucleotide excision repair protein pseudogene 1 chr3 18538673 18539899 + 1227 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RAD23BP1 NA 0.165 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC098592.7 NA chr7 16938225 16938557 + 333 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC098592.7 NA 0.012 70-80% NA NA NA NA NA boxplot CYP2B7P cytochrome P450 family 2 subfamily B member 7, pseudogene chr19 40924219 40950660 + 26442 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CYP2B7P NA 0.341 30-40% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot AC024704.2 NA chr2 113829390 113831119 - 1730 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC024704.2 NA 0.294 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CTD-2114J12.1 NA chr8 91157285 91158748 + 1464 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2114J12.1 NA 0.035 60-70% Liver 2.251093192 Breast_cancer,CRC,HCC,PAAD NA NA boxplot CTD-2336O2.1 NA chr8 1761990 1764502 - 2513 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2336O2.1 NA 0.929 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot CTC-428G20.6 NA chr5 115262505 115263448 + 944 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-428G20.6 NA 0.341 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot DYNC1I2P1 dynein, cytoplasmic 1, intermediate chain 2 pseudogene 1 chr10 50264978 50266815 + 1838 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DYNC1I2P1 NA 0.988 0-10% NA NA CHD,CRC,HCC,Normal,PAAD CRC(down),PAAD(down) NA boxplot RP11-307E17.11 NA chr9 94347234 94347563 - 330 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-307E17.11 NA 0.035 90-100% NA NA Normal NA NA boxplot CTC-412M14.5 NA chr19 19708965 19710465 + 1501 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-412M14.5 NA 0.012 90-100% Testis 1.316886496 Normal NA NA boxplot RP11-690D19.3 NA chr11 103050687 103055799 - 5113 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-690D19.3 NA 0.859 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-295H24.4 NA chr15 49343608 49344254 + 647 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-295H24.4 NA 0.141 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot MIR1539 microRNA 1539 chr18 49487339 49491878 + 4540 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MIR1539 NA 0.329 50-60% Testis 2.951697012 CRC,HCC,Normal,PAAD NA NA boxplot GOLGA2P5 golgin A2 pseudogene 5 chr12 100156357 100173659 - 17303 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GOLGA2P5 exo_circ_056444 0.682 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(up),PAAD(up) NA boxplot RPL7AP28 ribosomal protein L7a pseudogene 28 chr4 131857343 131857913 - 571 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL7AP28 NA 0.129 60-70% Testis 1.681956189 CRC,HCC,Normal,PAAD NA NA boxplot CTD-2308N23.2 NA chr20 38288331 38326536 - 38206 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2308N23.2 NA 0.059 70-80% Testis 3.508129741 CRC,HCC,Normal NA NA boxplot CTD-2002H8.2 NA chr14 58264662 58269681 + 5020 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2002H8.2 NA 0.082 20-30% NA NA CRC,Normal NA NA boxplot RP11-3D4.2 NA chr15 33858602 33864825 - 6224 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-3D4.2 NA 0.047 40-50% NA NA Breast_cancer,CRC,HCC,PAAD NA NA boxplot CTC-260E6.2 NA chr19 20125044 20125484 + 441 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-260E6.2 NA 0.929 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot ZNF444P1 zinc finger protein 444 pseudogene 1 chr15 58865006 58865303 + 298 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ZNF444P1 NA 0.047 90-100% NA NA HCC,Normal,PAAD NA NA boxplot DENND6A-AS1 DENND6A antisense RNA 1 chr3 57628810 57654918 + 26109 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DENND6A-AS1 NA 0.224 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot GTF2IP5 general transcription factor IIi pseudogene 5 chr7 65773620 65802067 + 28448 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GTF2IP5 exo_circ_050054 0.176 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot DPY19L1P2 DPY19L1 pseudogene 2 chr7 32812757 32838570 + 25814 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DPY19L1P2 exo_circ_014534 0.788 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down) NA boxplot RPS20P14 ribosomal protein S20 pseudogene 14 chr3 186900198 186900557 + 360 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPS20P14 NA 1 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD PAAD(down) NA boxplot RP11-478K15.6 NA chr13 44234118 44243192 - 9075 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-478K15.6 NA 0.012 90-100% Kidney 1.767451091 Breast_cancer NA NA boxplot AC011380.8 NA chr5 140569962 140594570 - 24609 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC011380.8 NA 0.659 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot SLC25A21-AS1 SLC25A21 antisense RNA 1 chr14 37171888 37173811 + 1924 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SLC25A21-AS1 NA 0.176 50-60% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-232D9.1 NA chrX 116748530 116748877 - 348 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-232D9.1 NA 0.165 90-100% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RPS3AP5 ribosomal protein S3A pseudogene 5 chr10 84560443 84561263 + 821 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPS3AP5 NA 1 0-10% NA NA CHD,CRC,HCC,Normal,PAAD CHD(up) NA boxplot RP4-738P15.1 NA chr20 25140789 25149258 - 8470 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-738P15.1 NA 0.024 40-50% Testis 2.209116431 Breast_cancer,CRC,Normal NA NA boxplot RP11-1036E20.9 NA chr11 59268876 59284033 - 15158 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1036E20.9 NA 0.047 40-50% Salivary Gland 3.043909536 Breast_cancer,Normal NA NA boxplot IGLL3P immunoglobulin lambda-like polypeptide 3, pseudogene chr22 25318256 25320080 + 1825 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=IGLL3P NA 0.024 70-80% NA NA Normal,PAAD NA NA boxplot RP11-411K7.1 NA chr6 53930022 53997667 + 67646 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-411K7.1 NA 0.024 70-80% Skin 1.814792252 HCC,Normal NA NA boxplot RP11-1263C18.2 NA chr4 577168 584866 + 7699 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1263C18.2 NA 0.012 90-100% NA NA Breast_cancer NA NA boxplot FAM86JP family with sequence similarity 86, member A pseudogene chr3 125916620 125930024 + 13405 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FAM86JP NA 0.341 20-30% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-81K13.1 NA chr12 75020969 75044793 + 23825 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-81K13.1 NA 0.012 90-100% NA NA CRC NA NA boxplot PABPC5-AS1 PABPC5 antisense RNA 1 chrX 91414878 91434999 - 20122 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PABPC5-AS1 NA 0.318 10-20% Ovary 1.801906455 CHD,CRC,HCC,Normal,PAAD NA NA boxplot HCG2040054 uncharacterized LOC644093 chr2 47527537 47535199 + 7663 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HCG2040054 NA 0.024 70-80% NA NA Breast_cancer,CRC,Normal NA NA boxplot DISC1-IT1 DISC1 intronic transcript 1 chr1 231925834 231945233 + 19400 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DISC1-IT1 exo_circ_043193 0.188 20-30% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot LINC01235 long intergenic non-protein coding RNA 1235 chr9 13406380 13433053 - 26674 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01235 NA 0.165 30-40% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot PTP4A1P3 protein tyrosine phosphatase type IVA, member 1 pseudogene 3 chr7 91107374 91107793 + 420 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PTP4A1P3 NA 0.024 70-80% NA NA CRC NA NA boxplot LENG8-AS1 LENG8 antisense RNA 1 chr19 54444813 54449045 - 4233 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LENG8-AS1 NA 0.412 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-809N8.4 NA chr11 73405297 73410682 + 5386 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-809N8.4 NA 0.612 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-498C9.2 NA chr17 81843165 81843958 + 794 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-498C9.2 NA 0.612 20-30% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot AC016683.5 NA chr2 113171535 113175360 - 3826 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC016683.5 NA 0.094 80-90% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-228B15.4 NA chr9 127816066 127822520 + 6455 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-228B15.4 NA 0.329 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-603J24.7 NA chr12 55980432 55981035 - 604 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-603J24.7 NA 0.929 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),HCC(up) NA boxplot AC010894.5 NA chr2 174575227 174587726 + 12500 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC010894.5 NA 0.576 50-60% Testis 4.373585368 CRC,HCC,Normal,PAAD NA NA boxplot RP11-195C7.1 NA chr1 176207648 176229330 + 21683 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-195C7.1 NA 0.506 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot NPM1P41 nucleophosmin 1 (nucleolar phosphoprotein B23, numatrin) pseudogene 41 chr4 82010665 82013095 - 2431 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NPM1P41 NA 0.012 80-90% NA NA NA NA NA boxplot RP11-155G14.6 NA chr7 128455937 128469197 + 13261 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-155G14.6 NA 0.247 80-90% NA NA CRC,HCC,Normal,PAAD NA NA boxplot AC073333.8 NA chr7 16695871 16719898 - 24028 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC073333.8 NA 0.165 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot HMGB1P31 high mobility group box 1 pseudogene 31 chr2 54051334 54051760 + 427 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HMGB1P31 NA 0.482 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot GLUD1P7 glutamate dehydrogenase 1 pseudogene 7 chr10 46759019 46786770 - 27752 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GLUD1P7 NA 0.118 20-30% NA NA CRC,HCC,Normal NA NA boxplot MYO5BP3 myosin VB pseudogene 3 chr9 63761546 63762824 - 1279 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MYO5BP3 NA 0.024 20-30% Spleen 4.20620537 Breast_cancer,CHD,CRC NA NA boxplot AC090587.5 NA chr11 3854318 3855509 - 1192 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC090587.5 NA 0.153 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-25I15.1 NA chr12 42678873 42679124 - 252 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-25I15.1 NA 0.106 90-100% NA NA CRC,HCC,Normal,PAAD NA NA boxplot AC001226.7 NA chr13 77027944 77028482 + 539 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC001226.7 NA 0.047 20-30% NA NA Breast_cancer,CRC,Normal,PAAD NA NA boxplot RP11-543D10.2 NA chr3 170345678 170353961 + 8284 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-543D10.2 NA 0.012 90-100% Testis 4.884701798 Breast_cancer NA NA boxplot CTD-2366F13.2 NA chr5 53089016 53089468 - 453 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2366F13.2 NA 0.035 10-20% NA NA HCC,PAAD NA NA boxplot RP11-17J14.2 NA chr18 23257164 23260354 - 3191 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-17J14.2 exo_circ_057718 0.118 50-60% NA NA Normal,PAAD NA NA boxplot PHKA1P1 phosphorylase kinase, alpha 1 pseudogene 1 chr1 90892992 90893612 - 621 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PHKA1P1 NA 0.129 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-509A17.3 NA chr15 20344736 20359166 + 14431 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-509A17.3 NA 0.024 10-20% Testis 3.695192249 Breast_cancer,Normal NA NA boxplot CSPG4P10 chondroitin sulfate proteoglycan 4 pseudogene 10 chr15 82459472 82477258 + 17787 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CSPG4P10 NA 0.129 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot TAS2R12 NA chr12 10894943 10896952 - 2010 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TAS2R12 NA 0.082 30-40% NA NA CRC,Normal,PAAD NA NA boxplot LINC01347 long intergenic non-protein coding RNA 1347 chr1 243056307 243101744 - 45438 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01347 NA 0.576 40-50% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot CH17-385C13.2 NA chr1 146321842 146328211 - 6370 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CH17-385C13.2 NA 0.588 20-30% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(down),PAAD(down) NA boxplot TERF1P1 telomeric repeat binding factor (NIMA-interacting) 1 pseudogene 1 chr21 13776086 13777266 + 1181 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TERF1P1 NA 0.188 80-90% Brain 4.906892038 CHD,HCC,Normal NA NA boxplot MESTIT1 MEST intronic transcript 1, antisense RNA chr7 130486042 130491033 - 4992 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MESTIT1 NA 0.447 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down) NA boxplot RP1-167G20.1 NA chr5 16373361 16440081 - 66721 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-167G20.1 NA 0.035 20-30% Testis 3.629523906 Breast_cancer,HCC,PAAD NA NA boxplot RP11-368J21.3 NA chr16 22545698 22576865 + 31168 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-368J21.3 NA 0.235 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CTC-487M23.7 NA chr5 112898023 112898371 + 349 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-487M23.7 NA 0.094 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-187E13.1 NA chr14 31944853 31950382 + 5530 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-187E13.1 NA 0.047 20-30% NA NA Breast_cancer,CRC,Normal NA NA boxplot AC138430.4 NA chr19 19254748 19273369 - 18622 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC138430.4 NA 0.047 80-90% NA NA Breast_cancer,HCC,Normal NA NA boxplot RP11-186B7.4 NA chr17 7572826 7582024 + 9199 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-186B7.4 NA 0.929 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot NDUFV2-AS1 NDUFV2 antisense RNA 1 chr18 9121265 9136645 - 15381 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NDUFV2-AS1 NA 0.694 20-30% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-187E13.2 NA chr14 32006902 32018685 + 11784 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-187E13.2 NA 0.024 30-40% NA NA HCC NA NA boxplot MKRN9P makorin ring finger protein 9, pseudogene chr12 87782163 87784568 - 2406 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MKRN9P NA 0.035 80-90% Testis 4.906892038 HCC,Normal,PAAD NA NA boxplot RP11-603B24.6 NA chr15 22202392 22202734 - 343 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-603B24.6 NA 0.035 10-20% Testis 4.764782434 HCC,PAAD NA NA boxplot HSPA8P9 heat shock protein family A (Hsp70) member 8 pseudogene 9 chr3 137880295 137882237 + 1943 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HSPA8P9 NA 0.012 40-50% NA NA CRC,Normal NA NA boxplot CTD-2083E4.5 NA chr5 288833 290321 - 1489 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2083E4.5 NA 0.624 70-80% NA NA CRC,HCC,Normal,PAAD NA NA boxplot WASH2P WAS protein family homolog 2 pseudogene chr2 113588550 113599043 + 10494 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=WASH2P NA 1 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up),CRC(up),HCC(up),PAAD(up) NA boxplot AC092580.4 NA chr2 7725801 7730705 + 4905 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC092580.4 NA 0.906 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),PAAD(up) NA boxplot NOS2P1 nitric oxide synthase 2 pseudogene 1 chr17 27651334 27665712 - 14379 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NOS2P1 NA 0.012 90-100% Testis 4.906892038 Breast_cancer,Normal NA NA boxplot CTD-2545G14.4 NA chr17 7192295 7192448 - 154 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2545G14.4 NA 0.059 90-100% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RNF152P1 ring finger protein 152 pseudogene 1 chr9 5418373 5418976 - 604 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RNF152P1 NA 0.094 70-80% NA NA CRC,Normal,PAAD NA NA boxplot SEPT14P12 septin 14 pseudogene 12 chr1 197138748 197139307 - 560 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SEPT14P12 exo_circ_053146 0.141 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CH17-232I21.1 NA chr7 75237293 75237405 - 113 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CH17-232I21.1 NA 0.129 90-100% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-706O15.7 NA chrX 3929869 3937855 - 7987 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-706O15.7 NA 0.541 0-10% Fallopian Tube 3.661989545 CRC,HCC,Normal,PAAD CHD(down),CRC(up),PAAD(up) NA boxplot RP11-642D21.1 NA chr8 105669991 105679031 + 9041 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-642D21.1 exo_circ_055533,exo_circ_055534,exo_circ_046917,exo_circ_035385,exo_circ_044693,exo_circ_035902,exo_circ_039244,exo_circ_050123,exo_circ_042433,exo_circ_055536,exo_circ_050124,exo_circ_039245,exo_circ_050125,exo_circ_042434 0.082 40-50% Testis 1.830181137 CRC,HCC,Normal NA NA boxplot CTD-2396E7.9 NA chr19 6494320 6494805 + 486 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2396E7.9 NA 0.071 90-100% NA NA HCC,Normal NA NA boxplot RP5-1022P6.7 NA chr20 5499116 5502881 + 3766 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-1022P6.7 NA 0.012 30-40% Testis 4.906892038 HCC NA NA boxplot RP11-332J15.2 NA chr5 6868559 6886787 + 18229 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-332J15.2 NA 0.059 60-70% Testis 3.67245963 CRC,HCC,Normal,PAAD NA NA boxplot RP11-282O18.7 NA chr12 123262060 123262402 + 343 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-282O18.7 NA 0.012 60-70% NA NA HCC NA NA boxplot MTND2P26 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 2 pseudogene 26 chr11 103406213 103407241 - 1029 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MTND2P26 NA 0.012 30-40% NA NA Normal NA NA boxplot SMYD3-IT1 SMYD3 intronic transcript 1 chr1 246321663 246322438 - 776 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SMYD3-IT1 exo_circ_053262,exo_circ_053263,exo_circ_048292,exo_circ_048294,exo_circ_036131,exo_circ_038040,exo_circ_053266 0.059 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RPSAP28 ribosomal protein SA pseudogene 28 chr2 73370019 73370892 + 874 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPSAP28 NA 0.012 90-100% NA NA NA NA NA boxplot HCG4 HLA complex group 4 (non-protein coding) chr6 29791753 29792750 - 998 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HCG4 NA 0.2 40-50% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-24C3.2 NA chr3 48440352 48446656 - 6305 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-24C3.2 NA 0.165 70-80% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-93B14.9 NA chr20 62648961 62650767 - 1807 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-93B14.9 NA 0.812 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down) NA boxplot PHBP13 prohibitin pseudogene 13 chr13 35251070 35251829 + 760 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PHBP13 NA 0.024 30-40% NA NA Breast_cancer,HCC NA NA boxplot RP11-411B10.4 NA chr18 14074912 14075741 - 830 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-411B10.4 NA 0.012 40-50% NA NA Normal NA NA boxplot RP11-667K14.9 NA chr17 2122342 2122508 - 167 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-667K14.9 NA 0.035 60-70% NA NA CRC,HCC NA NA boxplot RPS26P47 ribosomal protein S26 pseudogene 47 chr13 100539901 100540248 - 348 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPS26P47 NA 0.965 0-10% NA NA CHD,CRC,HCC,Normal,PAAD CHD(up),CRC(up),HCC(up),PAAD(up) NA boxplot CTD-2319I12.2 NA chr17 60079309 60088695 + 9387 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2319I12.2 NA 0.247 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot HCG17 HLA complex group 17 (non-protein coding) chr6 30234039 30326134 - 92096 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HCG17 NA 0.176 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-29B2.6 NA chr13 102593338 102593873 - 536 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-29B2.6 NA 0.071 70-80% NA NA HCC,Normal,PAAD NA NA boxplot SVILP1 supervillin pseudogene 1 chr10 30655489 30717266 + 61778 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SVILP1 NA 0.553 10-20% NA NA CRC,HCC,Normal,PAAD PAAD(up) NA boxplot RP11-543D5.2 NA chr1 47761132 47765547 - 4416 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-543D5.2 NA 0.012 70-80% NA NA PAAD NA NA boxplot HBBP1 hemoglobin subunit beta pseudogene 1 chr11 5241954 5243537 - 1584 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HBBP1 NA 0.294 40-50% Whole Blood 4.803439884 CRC,HCC,Normal,PAAD NA NA boxplot RP11-578F21.10 NA chr15 28788243 28792002 + 3760 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-578F21.10 NA 0.012 90-100% Adrenal Gland 2.031499479 Breast_cancer,HCC NA NA boxplot RP11-1198D22.1 NA chr5 71220356 71259238 - 38883 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1198D22.1 NA 0.824 10-20% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(down) NA boxplot PHBP9 prohibitin pseudogene 9 chr10 100248271 100249095 + 825 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PHBP9 NA 0.047 10-20% NA NA CRC,HCC,PAAD NA NA boxplot ST8SIA6-AS1 ST8SIA6 antisense RNA 1 chr10 17386936 17413503 + 26568 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ST8SIA6-AS1 NA 0.365 20-30% Testis 3.012074747 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-255C15.3 NA chr3 179340322 179341887 + 1566 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-255C15.3 NA 0.094 40-50% NA NA HCC,Normal,PAAD NA NA boxplot MAFA-AS1 MAFA antisense RNA 1 chr8 143417679 143419150 + 1472 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MAFA-AS1 NA 0.012 80-90% NA NA NA NA NA boxplot C10orf111 chromosome 10 open reading frame 111 chr10 15095385 15097319 - 1935 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=C10orf111 NA 0.012 90-100% Testis 1.278281154 Normal,PAAD NA NA boxplot AC002543.2 NA chr7 116873454 116876376 - 2923 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC002543.2 NA 0.035 60-70% NA NA Breast_cancer,HCC,Normal NA NA boxplot RP11-809H16.2 NA chr15 68930504 69028889 + 98386 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-809H16.2 NA 0.059 30-40% NA NA Breast_cancer,HCC,Normal NA NA boxplot RP11-208N14.5 NA chr3 187291272 187297933 + 6662 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-208N14.5 NA 0.059 70-80% NA NA CRC,HCC,Normal NA NA boxplot MYLK-AS2 MYLK antisense RNA 2 chr3 123689644 123692407 + 2764 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MYLK-AS2 NA 0.141 60-70% Testis 1.895386123 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-274G22.1 NA chrX 20769718 21374265 - 604548 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-274G22.1 NA 0.012 70-80% NA NA Breast_cancer,HCC,Normal NA NA boxplot AC114752.1 NA chr2 64330486 64332131 - 1646 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC114752.1 NA 0.106 70-80% Testis 4.906892038 CRC,HCC,Normal,PAAD NA NA boxplot RP11-379F4.8 NA chr3 158782547 158783124 + 578 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-379F4.8 NA 0.047 50-60% NA NA CRC,PAAD NA NA boxplot CTD-2313F11.1 NA chr5 55021299 55042844 - 21546 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2313F11.1 NA 0.212 30-40% Testis 3.537457258 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-16E12.1 NA chr15 31216020 31224445 + 8426 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-16E12.1 NA 0.624 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-321A17.4 NA chr17 29140483 29155489 + 15007 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-321A17.4 NA 0.082 20-30% Small Intestine 4.408237446 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-261C10.4 NA chr1 243164638 243169445 + 4808 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-261C10.4 NA 0.176 60-70% Testis 4.906892038 CRC,HCC,Normal,PAAD NA NA boxplot XXbac-BPG254F23.7 NA chr6 32718005 32719170 + 1166 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=XXbac-BPG254F23.7 NA 0.012 70-80% Testis 4.906892038 Breast_cancer,CRC NA NA boxplot RP1-151F17.1 NA chr6 16761138 16762652 + 1515 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-151F17.1 NA 0.247 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-75L1.1 NA chr12 9704077 9709350 + 5274 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-75L1.1 NA 0.259 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-111M22.4 NA chr11 76389648 76390128 + 481 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-111M22.4 NA 0.024 80-90% NA NA CRC NA NA boxplot RP11-362L22.1 NA chr14 100406599 100407613 + 1015 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-362L22.1 NA 0.047 10-20% Pituitary 3.801998417 Breast_cancer,CRC,HCC,Normal NA NA boxplot EIF4A2P4 eukaryotic translation initiation factor 4A2 pseudogene 4 chrX 52832704 52833899 - 1196 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=EIF4A2P4 NA 0.412 70-80% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-206L10.2 NA chr1 725885 778626 - 52742 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-206L10.2 NA 0.824 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(up),HCC(up),PAAD(up) NA boxplot MYB-AS1 MYB antisense RNA 1 chr6 135195083 135195995 - 913 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MYB-AS1 NA 0.012 50-60% NA NA CRC,Normal NA NA boxplot AC114765.2 NA chr2 220127546 220212491 + 84946 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC114765.2 NA 0.012 90-100% NA NA NA NA NA boxplot CTC-251D13.1 NA chr5 151509453 151512769 + 3317 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-251D13.1 NA 0.176 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-1012E15.2 NA chr14 55896547 55962970 + 66424 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1012E15.2 NA 0.024 50-60% NA NA Normal NA NA boxplot RP11-240G22.4 NA chr12 116801023 116801477 + 455 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-240G22.4 NA 0.024 90-100% NA NA CRC NA NA boxplot RP4-631H13.6 NA chr1 52920422 52920596 + 175 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-631H13.6 NA 0.024 70-80% NA NA CRC NA NA boxplot AC078942.1 NA chr7 158537495 158539879 + 2385 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC078942.1 NA 0.094 30-40% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot CTD-2542L18.1 NA chr16 85592266 85595720 + 3455 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2542L18.1 NA 0.247 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC002451.3 NA chr7 95596682 95613719 + 17038 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC002451.3 NA 0.576 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-735G4.1 NA chr6 125370211 125374324 - 4114 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-735G4.1 NA 0.024 60-70% Artery 2.32585924 Breast_cancer,CRC NA NA boxplot RP11-173M1.5 NA chr17 27351858 27352584 - 727 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-173M1.5 NA 0.047 60-70% NA NA HCC,Normal NA NA boxplot RP11-524O1.4 NA chr14 21384292 21384920 + 629 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-524O1.4 NA 0.024 50-60% Testis 3.653577277 CRC,Normal NA NA boxplot C1orf220 chromosome 1 open reading frame 220 chr1 178542752 178548889 + 6138 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=C1orf220 NA 0.306 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot GTF2IP20 general transcription factor IIi pseudogene 20 chr1 223951394 223992594 - 41201 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GTF2IP20 NA 0.765 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(up),PAAD(up) NA boxplot CTD-3141N22.1 NA chr19 53386233 53386388 + 156 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-3141N22.1 NA 0.094 80-90% NA NA CRC,HCC,Normal,PAAD NA NA boxplot SVIL-AS1 SVIL antisense RNA 1 chr10 29409402 29487745 + 78344 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SVIL-AS1 NA 1 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up) NA boxplot AC004967.7 NA chr7 97969005 97972254 - 3250 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC004967.7 NA 0.906 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-404K5.1 NA chr5 7290823 7296345 + 5523 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-404K5.1 NA 0.129 70-80% Testis 4.879096856 CRC,HCC,Normal,PAAD NA NA boxplot RP11-476I15.5 NA chr20 64278306 64278561 + 256 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-476I15.5 NA 0.012 80-90% NA NA Breast_cancer,CRC NA NA boxplot AC009892.5 NA chr19 54607870 54608376 + 507 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC009892.5 NA 0.012 50-60% NA NA Breast_cancer,Normal NA NA boxplot CTD-3116E22.8 NA chr19 9721903 9722410 + 508 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-3116E22.8 NA 0.118 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot AC016734.2 NA chr2 63622178 63622831 - 654 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC016734.2 NA 0.906 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down) NA boxplot LINC00923 long intergenic non-protein coding RNA 923 chr15 97572185 97874550 - 302366 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00923 NA 0.282 40-50% Testis 1.234911302 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-254F7.3 NA chr2 10054421 10054866 - 446 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-254F7.3 NA 0.118 50-60% NA NA HCC,Normal,PAAD NA NA boxplot RP11-23J18.1 NA chr12 47135498 47138370 - 2873 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-23J18.1 NA 0.682 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot RP11-56L13.7 NA chr16 32250620 32254422 - 3803 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-56L13.7 NA 0.012 20-30% Testis 4.906892038 Normal NA NA boxplot BZW1P2 basic leucine zipper and W2 domains 1 pseudogene 2 chr3 116645902 116646727 - 826 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=BZW1P2 NA 1 0-10% NA NA CHD,CRC,HCC,Normal,PAAD CHD(down) NA boxplot AC115617.2 NA chrX 48775993 48776970 - 978 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC115617.2 NA 0.906 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),PAAD(down) NA boxplot BDH2P1 3-hydroxybutyrate dehydrogenase, type 2 pseudogene 1 chr6 99174744 99175479 + 736 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=BDH2P1 NA 0.353 70-80% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-690I21.2 NA chr2 231809846 231812352 + 2507 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-690I21.2 NA 0.082 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot PRKCA-AS1 PRKCA antisense RNA 1 chr17 66398069 66416854 - 18786 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PRKCA-AS1 NA 0.094 50-60% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot EXTL2P1 exostoses (multiple)-like 2 pseudogene 1 chr2 175842887 175843302 + 416 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=EXTL2P1 NA 0.012 90-100% NA NA NA NA NA boxplot PTENP1 phosphatase and tensin homolog pseudogene 1 (functional) chr9 33673504 33677499 - 3996 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PTENP1 NA 0.988 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down) Yes boxplot RP11-91P24.6 NA chr11 77866412 77870091 - 3680 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-91P24.6 NA 0.106 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-449D8.5 NA chr18 24725781 24929076 + 203296 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-449D8.5 NA 0.012 70-80% Spleen 2.307918965 Breast_cancer,Normal NA NA boxplot RP11-404G16.2 NA chr3 133760300 133762363 + 2064 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-404G16.2 NA 0.035 10-20% Liver 4.18578461 HCC NA NA boxplot MTCO2P2 MT-CO2 pseudogene 2 chr18 47853233 47853457 - 225 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MTCO2P2 NA 0.024 90-100% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-148O21.4 NA chr8 11556251 11558022 - 1772 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-148O21.4 NA 0.118 80-90% Spleen 3.202571846 CRC,HCC,Normal NA NA boxplot RP11-447M12.2 NA chr9 134937151 134943195 + 6045 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-447M12.2 NA 0.024 40-50% Testis 3.84078823 Normal,PAAD NA NA boxplot RP11-324I22.3 NA chr10 35210416 35210750 + 335 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-324I22.3 NA 0.012 60-70% NA NA HCC,PAAD NA NA boxplot LINC00158 long intergenic non-protein coding RNA 158 chr21 25385820 25431701 - 45882 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00158 NA 0.259 20-30% Testis 3.35196293 CHD,CRC,HCC,Normal,PAAD NA NA boxplot WHAMMP3 WAS protein homolog associated with actin, golgi membranes and microtubules pseudogene 3 chr15 22664359 22686213 + 21855 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=WHAMMP3 NA 1 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-306I1.1 NA chr1 165581613 165582476 + 864 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-306I1.1 NA 0.012 70-80% Testis 4.906892038 PAAD NA NA boxplot RP11-173C1.1 NA chr2 38959287 38960342 - 1056 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-173C1.1 NA 0.082 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot SLCO4A1-AS1 SLCO4A1 antisense RNA 1 chr20 62663019 62666724 - 3706 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SLCO4A1-AS1 NA 0.059 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-6I2.3 NA chr8 74052340 74099853 + 47514 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-6I2.3 NA 0.059 30-40% NA NA Breast_cancer,CRC,HCC NA NA boxplot KCTD9P2 potassium channel tetramerization domain containing 9 pseudogene 2 chrX 105405647 105407039 + 1393 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KCTD9P2 NA 0.776 10-20% NA NA CHD,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down) NA boxplot OR7E47P olfactory receptor family 7 subfamily E member 47 pseudogene chr12 52084744 52092285 + 7542 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=OR7E47P NA 0.094 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up) NA boxplot SPATA3-AS1 SPATA3 antisense RNA 1 (head to head) chr2 230984368 230996032 - 11665 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SPATA3-AS1 NA 0.012 80-90% NA NA Breast_cancer NA NA boxplot LGALS9DP lectin, galactoside-binding, soluble, 9D, pseudogene chr17 27746132 27754954 + 8823 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LGALS9DP NA 0.965 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-327J17.7 NA chr15 96112628 96116051 - 3424 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-327J17.7 NA 0.024 60-70% NA NA Breast_cancer,HCC NA NA boxplot RP11-665C16.6 NA chr14 55262767 55272075 - 9309 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-665C16.6 NA 0.106 60-70% Testis 4.13576217 Breast_cancer,CRC,HCC,Normal NA NA boxplot RP11-575F12.3 NA chr12 127147149 127150081 + 2933 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-575F12.3 NA 0.106 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP13-1032I1.11 NA chr17 81697025 81697714 - 690 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP13-1032I1.11 NA 0.094 70-80% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot LINC00593 long intergenic non-protein coding RNA 593 chr15 69835234 69843120 + 7887 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00593 NA 0.106 50-60% Testis 3.553824707 Breast_cancer,CRC,HCC,Normal NA NA boxplot TCEB2P3 transcription elongation factor B (SIII), polypeptide 2 (18kDa, elongin B) pseudogene 3 chr2 48780602 48780895 + 294 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TCEB2P3 NA 0.012 60-70% NA NA HCC NA NA boxplot AC002310.14 NA chr16 30526918 30528294 + 1377 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC002310.14 NA 0.106 40-50% NA NA Breast_cancer,CRC,Normal,PAAD NA NA boxplot RP11-449J21.3 NA chr17 76090308 76091669 + 1362 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-449J21.3 NA 0.024 80-90% NA NA Breast_cancer,HCC NA NA boxplot RP11-382B18.5 NA chr15 30420283 30420429 - 147 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-382B18.5 NA 0.306 70-80% NA NA CRC,HCC,Normal,PAAD NA NA boxplot KRT18P20 keratin 18 pseudogene 20 chr12 104976749 104978027 - 1279 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KRT18P20 NA 0.012 30-40% Testis 4.906892038 Breast_cancer,CRC NA NA boxplot RP11-407H12.8 NA chr1 248484245 248485484 - 1240 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-407H12.8 NA 0.129 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-4C20.3 NA chr10 127929376 127934517 - 5142 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-4C20.3 NA 0.012 80-90% Testis 1.960634796 Normal NA NA boxplot RPL21P65 ribosomal protein L21 pseudogene 65 chr6 106642463 106642928 + 466 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL21P65 NA 0.047 20-30% NA NA CRC,Normal NA NA boxplot RP11-15L13.4 NA chr3 179583262 179583762 - 501 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-15L13.4 NA 0.224 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot AC015691.13 NA chr11 5572322 5624896 - 52575 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC015691.13 NA 0.094 50-60% Ovary 4.906892038 CRC,HCC,Normal,PAAD NA NA boxplot ENTPD1-AS1 ENTPD1 antisense RNA 1 chr10 95753206 96090238 - 337033 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ENTPD1-AS1 exo_circ_028270,exo_circ_046757,exo_circ_045190,exo_circ_039640 0.941 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-624M8.1 NA chr6 125578558 125749190 - 170633 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-624M8.1 NA 0.047 30-40% NA NA Breast_cancer,CRC,Normal NA NA boxplot RP11-744N12.3 NA chr11 128629653 128686922 - 57270 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-744N12.3 NA 0.741 0-10% Spleen 3.102082101 Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),HCC(down) NA boxplot AC002551.1 NA chr16 27643199 27644663 + 1465 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC002551.1 NA 0.024 50-60% NA NA CRC NA NA boxplot HAUS6P1 HAUS augmin like complex subunit 6 pseudogene 1 chr7 53187388 53188938 + 1551 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HAUS6P1 NA 0.906 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-89K18.1 NA chr10 2936021 2936441 + 421 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-89K18.1 NA 0.047 60-70% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot AC006552.1 NA chr4 54603211 54607131 - 3921 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC006552.1 NA 0.212 30-40% Spleen 4.906892038 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC016700.6 NA chr2 70253855 70254010 - 156 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC016700.6 NA 0.718 70-80% NA NA CRC,HCC,Normal,PAAD NA NA boxplot MCPH1-AS1 MCPH1 antisense RNA 1 chr8 6618475 6708209 - 89735 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MCPH1-AS1 exo_circ_050248 0.882 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot THRB-IT1 THRB intronic transcript 1 chr3 24455136 24459434 - 4299 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=THRB-IT1 exo_circ_027492 0.035 40-50% NA NA CRC,PAAD NA NA boxplot MTND2P30 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 2 pseudogene 30 chr1 81080790 81081171 + 382 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MTND2P30 NA 0.012 70-80% NA NA Normal NA NA boxplot RP11-283C24.1 NA chr17 20788071 20789584 + 1514 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-283C24.1 NA 0.035 80-90% Testis 4.462300119 CRC NA NA boxplot AC139099.7 NA chr17 83132647 83136150 - 3504 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC139099.7 NA 0.012 80-90% NA NA Breast_cancer,Normal NA NA boxplot RP11-405O10.2 NA chr6 7183083 7185287 + 2205 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-405O10.2 NA 0.153 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot AC015849.2 NA chr17 35868967 35885863 + 16897 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC015849.2 NA 0.506 20-30% Testis 2.248571215 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP1-63P18.2 NA chr1 40563534 40563659 + 126 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-63P18.2 NA 0.012 70-80% NA NA Breast_cancer,HCC NA NA boxplot AC114877.3 NA chr3 26712307 26713364 + 1058 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC114877.3 NA 0.012 90-100% NA NA Normal NA NA boxplot SUMO2P6 SUMO2 pseudogene 6 chr5 174561776 174562063 + 288 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SUMO2P6 NA 0.012 30-40% NA NA Normal,PAAD NA NA boxplot LINC00483 long intergenic non-protein coding RNA 483 chr17 50761029 50767557 - 6529 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00483 NA 0.035 20-30% Small Intestine 4.07742221 Breast_cancer,HCC,PAAD NA NA boxplot RP11-90H3.2 NA chr1 105890693 105891430 - 738 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-90H3.2 NA 0.012 80-90% Testis 4.906892038 NA NA NA boxplot AC098820.4 NA chr2 216483032 216487196 - 4165 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC098820.4 NA 0.035 70-80% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RNF217-AS1 RNF217 antisense RNA 1 (head to head) chr6 124909093 124963039 - 53947 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RNF217-AS1 exo_circ_013480,exo_circ_004083 0.682 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down) NA boxplot RP11-350G8.9 NA chr1 154480012 154481501 + 1490 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-350G8.9 NA 0.118 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot MIR646HG MIR646 host gene chr20 60087840 60527458 + 439619 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MIR646HG exo_circ_041833,exo_circ_040679,exo_circ_058069,exo_circ_058070 0.941 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down),HCC(down) NA boxplot OPA1-AS1 OPA1 antisense RNA 1 chr3 193618609 193627337 - 8729 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=OPA1-AS1 exo_circ_049040,exo_circ_043843 0.141 70-80% NA NA CRC,HCC,Normal,PAAD NA NA boxplot UGT2B24P UDP glucuronosyltransferase 2 family, polypeptide B24 pseudogene chr4 69408828 69423164 + 14337 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=UGT2B24P NA 0.012 90-100% NA NA Normal NA NA boxplot RP11-45P15.4 NA chr14 103331674 103332367 - 694 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-45P15.4 NA 0.176 70-80% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-392B6.1 NA chr4 140128015 140134565 + 6551 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-392B6.1 NA 0.024 80-90% Testis 3.81302387 Breast_cancer,Normal NA NA boxplot RP11-43N22.1 NA chr10 76270206 76270800 + 595 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-43N22.1 exo_circ_010711,exo_circ_056204,exo_circ_033918,exo_circ_056205 0.035 60-70% NA NA Breast_cancer,CRC NA NA boxplot RP11-31H5.3 NA chr15 56729932 56730611 - 680 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-31H5.3 NA 0.071 60-70% NA NA CRC,HCC,Normal NA NA boxplot RP11-156K13.1 NA chr8 17801345 17861069 + 59725 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-156K13.1 NA 0.012 60-70% NA NA Breast_cancer NA NA boxplot RP13-1039J1.2 NA chr2 110402914 110435166 - 32253 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP13-1039J1.2 NA 0.518 40-50% Testis 1.836272204 CRC,HCC,Normal,PAAD NA NA boxplot MMP23A matrix metallopeptidase 23A (pseudogene) chr1 1699942 1701782 + 1841 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MMP23A NA 0.376 60-70% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot GUCY1B2 guanylate cyclase 1, soluble, beta 2 (pseudogene) chr13 50994511 51080862 - 86352 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GUCY1B2 NA 0.024 10-20% Spleen 1.098790423 Breast_cancer,Normal,PAAD NA NA boxplot FAM74A4 family with sequence similarity 74 member A4 chr9 61205258 61212373 + 7116 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FAM74A4 NA 0.082 30-40% Testis 4.906892038 CHD,CRC,HCC,PAAD NA NA boxplot CTD-3126B10.1 NA chr16 2597881 2599718 - 1838 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-3126B10.1 NA 0.576 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot CTD-2619J13.14 NA chr19 58404238 58408484 - 4247 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2619J13.14 NA 0.847 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),HCC(up),PAAD(up) NA boxplot MIR1302-10 microRNA 1302-10 chr15 101959848 101961408 - 1561 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MIR1302-10 NA 0.012 90-100% Testis 2.123850185 HCC,Normal NA NA boxplot CTD-2349P21.10 NA chr17 30781493 30782221 - 729 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2349P21.10 NA 0.047 90-100% NA NA CRC,HCC,Normal NA NA boxplot AC090283.3 NA chr17 40687038 40689360 - 2323 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC090283.3 NA 0.012 80-90% NA NA Breast_cancer,Normal NA NA boxplot AC016735.2 NA chr2 43027853 43039547 - 11695 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC016735.2 NA 0.141 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-240E2.2 NA chr9 108040213 108040592 + 380 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-240E2.2 NA 0.047 80-90% Testis 2.366411716 Breast_cancer,CRC,HCC NA NA boxplot AC005943.6 NA chr19 1576939 1577086 + 148 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC005943.6 NA 0.071 50-60% NA NA HCC,Normal,PAAD NA NA boxplot RP11-432I5.6 NA chr16 71655027 71664212 + 9186 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-432I5.6 NA 0.106 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-67C2.2 NA chr10 45444570 45453121 - 8552 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-67C2.2 exo_circ_056141 0.071 70-80% NA NA Breast_cancer,CRC,HCC,PAAD NA NA boxplot RP11-83M16.6 NA chr5 67699429 67902600 - 203172 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-83M16.6 NA 0.141 30-40% Nerve 2.149031768 CRC,HCC,Normal,PAAD NA NA boxplot AC016644.1 NA chr5 56941307 56947152 + 5846 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC016644.1 NA 0.059 90-100% Testis 1.932641464 HCC,Normal NA NA boxplot CH17-333M13.2 NA chr1 143343180 143343275 + 96 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CH17-333M13.2 NA 0.012 90-100% NA NA CRC,Normal NA NA boxplot OR7E94P olfactory receptor family 7 subfamily E member 94 pseudogene chr4 79587302 79588130 - 829 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=OR7E94P NA 0.176 0-10% NA NA CRC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot RP5-875H18.10 NA chr17 50098460 50098899 - 440 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-875H18.10 NA 0.024 60-70% NA NA CRC,HCC NA NA boxplot RP11-1M18.1 NA chrX 6667865 6721544 - 53680 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1M18.1 NA 0.024 10-20% NA NA Normal NA NA boxplot RP11-87G24.3 NA chr17 76950317 76969156 - 18840 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-87G24.3 NA 0.082 50-60% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot CTD-2292M16.8 NA chr14 20260480 20264308 - 3829 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2292M16.8 NA 0.294 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-897M7.1 NA chr12 131469311 131492951 - 23641 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-897M7.1 NA 0.012 90-100% Testis 4.642158578 Breast_cancer,HCC NA NA boxplot RP11-158G18.1 NA chr3 18408680 18409635 - 956 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-158G18.1 NA 0.082 70-80% NA NA CRC,Normal NA NA boxplot RP11-615I2.6 NA chr16 68591382 68594424 + 3043 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-615I2.6 NA 0.035 60-70% NA NA Breast_cancer,CRC,Normal,PAAD NA NA boxplot RP4-583P15.10 NA chr20 63744689 63745958 + 1270 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-583P15.10 NA 0.2 50-60% NA NA Breast_cancer,CRC,Normal,PAAD NA NA boxplot ITPKB-AS1 ITPKB antisense RNA 1 chr1 226668897 226676345 + 7449 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ITPKB-AS1 NA 0.012 90-100% Spleen 4.906892038 CRC NA NA boxplot CTA-276O3.4 NA chr7 103348601 103348771 + 171 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTA-276O3.4 NA 0.024 50-60% NA NA CRC NA NA boxplot CTD-2366F13.1 NA chr5 53109842 53115126 + 5285 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2366F13.1 NA 0.671 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD PAAD(up) NA boxplot RP11-355B11.2 NA chr2 61471188 61484130 + 12943 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-355B11.2 NA 0.859 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),PAAD(up) NA boxplot LINC00996 long intergenic non-protein coding RNA 996 chr7 150433654 150448140 + 14487 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00996 NA 0.753 10-20% Spleen 2.868102865 Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down),HCC(down),PAAD(down) NA boxplot RP11-204M4.1 NA chr9 39892550 39892895 + 346 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-204M4.1 NA 0.012 90-100% NA NA PAAD NA NA boxplot NANOGNBP3 NANOGNB pseudogene 3 chrX 101337725 101338289 - 565 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NANOGNBP3 NA 0.024 0-10% NA NA PAAD NA NA boxplot DDX3P2 DEAD-box helicase 3 pseudogene 2 chrX 74133004 74133114 - 111 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DDX3P2 NA 0.035 80-90% NA NA Normal NA NA boxplot RP11-529G21.3 NA chr3 153129074 153129640 - 567 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-529G21.3 NA 0.188 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot KCTD21-AS1 KCTD21 antisense RNA 1 chr11 78139771 78175323 + 35553 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KCTD21-AS1 NA 0.6 20-30% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP3-395M20.2 NA chr1 2492300 2493258 - 959 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-395M20.2 NA 0.012 80-90% NA NA Breast_cancer,CRC,Normal NA NA boxplot MORC2-AS1 MORC2 antisense RNA 1 chr22 30922308 30932449 + 10142 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MORC2-AS1 NA 0.694 20-30% Testis 3.871196348 CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-295G20.2 NA chr1 231522388 231528556 - 6169 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-295G20.2 NA 0.918 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),PAAD(up) NA boxplot RP4-738P11.3 NA chr1 168542737 168543354 + 618 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-738P11.3 NA 0.012 10-20% NA NA Normal NA NA boxplot THRAP3P1 thyroid hormone receptor associated protein 3 pseudogene 1 chr3 31452832 31455894 + 3063 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=THRAP3P1 NA 0.518 60-70% Testis 4.906892038 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-651L5.3 NA chr12 106250759 106252786 + 2028 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-651L5.3 NA 0.153 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP4-539M6.20 NA chr22 30420512 30420912 + 401 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-539M6.20 NA 0.012 80-90% NA NA NA NA NA boxplot HLA-DRB6 major histocompatibility complex, class II, DR beta 6 (pseudogene) chr6 32552713 32560022 - 7310 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HLA-DRB6 exo_circ_002221 0.435 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-221J22.1 NA chr3 101940859 101997926 + 57068 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-221J22.1 NA 0.682 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-123K19.1 NA chr9 126589594 126613700 - 24107 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-123K19.1 NA 0.012 60-70% NA NA Breast_cancer NA NA boxplot RP1-278C19.8 NA chr12 120224744 120225421 + 678 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-278C19.8 NA 0.012 60-70% NA NA Breast_cancer,CRC NA NA boxplot CTA-929C8.7 NA chr22 27307483 27318538 - 11056 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTA-929C8.7 NA 0.012 80-90% Testis 3.771686205 Breast_cancer,PAAD NA NA boxplot RP11-474D14.2 NA chr10 67960702 67961464 - 763 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-474D14.2 NA 0.141 40-50% NA NA CRC,Normal,PAAD NA NA boxplot RP4-548D19.3 NA chr7 151240399 151240972 + 574 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-548D19.3 NA 0.141 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-169K16.4 NA chr1 15740051 15749896 - 9846 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-169K16.4 NA 0.012 60-70% Artery 3.790433059 Breast_cancer,HCC NA NA boxplot HNRNPA1P14 heterogeneous nuclear ribonucleoprotein A1 pseudogene 14 chr9 88410529 88411463 - 935 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HNRNPA1P14 NA 0.012 30-40% NA NA Breast_cancer,Normal NA NA boxplot RP11-367N14.2 NA chr4 183494938 183504494 - 9557 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-367N14.2 NA 0.365 20-30% Testis 1.246422412 CRC,HCC,Normal,PAAD NA NA boxplot LINC01152 long intergenic non-protein coding RNA 1152 chr17 72030291 72041297 + 11007 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01152 NA 0.024 70-80% NA NA Breast_cancer,HCC NA NA boxplot LL21NC02-1C16.1 NA chr21 44929653 44930112 - 460 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LL21NC02-1C16.1 NA 0.024 70-80% NA NA Breast_cancer,PAAD NA NA boxplot PTCHD1-AS PTCHD1 antisense RNA (head to head) chrX 22259797 23293146 - 1033350 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PTCHD1-AS NA 0.024 20-30% NA NA HCC,PAAD NA NA boxplot RP11-15E1.5 NA chr9 66014525 66020816 - 6292 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-15E1.5 NA 0.071 40-50% NA NA CRC,HCC,Normal NA NA boxplot BTF3P6 basic transcription factor 3 pseudogene 6 chr21 33518610 33519108 - 499 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=BTF3P6 NA 0.035 50-60% NA NA Normal,PAAD NA NA boxplot AC109826.1 NA chr2 98761938 98772920 - 10983 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC109826.1 NA 0.8 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot AOX2P aldehyde oxidase 2 pseudogene chr2 200695917 200794239 + 98323 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AOX2P exo_circ_053644 0.141 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-503C24.3 NA chr6 168229732 168240715 + 10984 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-503C24.3 NA 0.012 40-50% Testis 4.906892038 PAAD NA NA boxplot RP11-517O13.1 NA chr14 58398557 58427125 + 28569 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-517O13.1 NA 0.094 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-349N19.2 NA chrX 123514473 123514872 + 400 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-349N19.2 NA 0.824 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot OR7E29P olfactory receptor family 7 subfamily E member 29 pseudogene chr3 125712139 125713045 + 907 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=OR7E29P NA 0.012 90-100% Testis 2.358192304 PAAD NA NA boxplot CTC-512J14.5 NA chr5 80351021 80351956 - 936 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-512J14.5 NA 0.718 20-30% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(down),PAAD(down) NA boxplot SRSF10P1 serine/arginine-rich splicing factor 10 pseudogene 1 chr18 51158282 51159383 - 1102 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SRSF10P1 NA 0.059 60-70% Testis 4.906892038 Breast_cancer,CRC,Normal NA NA boxplot XXbac-BPG181M17.6 NA chr6 32972065 32972853 - 789 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=XXbac-BPG181M17.6 NA 0.282 10-20% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot RP11-231G15.3 NA chr5 109470843 109471586 + 744 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-231G15.3 NA 0.012 30-40% Testis 4.906892038 NA NA NA boxplot RP11-101E7.2 NA chr16 22083256 22092231 - 8976 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-101E7.2 NA 0.047 20-30% Testis 1.470980898 HCC,Normal NA NA boxplot RP11-973H7.4 NA chr18 12739490 12749421 - 9932 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-973H7.4 NA 0.235 40-50% Testis 3.41342703 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC004019.10 NA chr22 17418697 17419828 + 1132 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC004019.10 NA 0.024 0-10% NA NA Breast_cancer,PAAD NA NA boxplot RP11-216B9.9 NA chr9 128630328 128631685 - 1358 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-216B9.9 NA 0.129 80-90% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot RPL23AP47 ribosomal protein L23a pseudogene 47 chr6 170745518 170745977 + 460 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL23AP47 NA 0.106 80-90% NA NA CHD,HCC,PAAD NA NA boxplot C17orf82 chromosome 17 open reading frame 82 chr17 61411751 61413280 + 1530 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=C17orf82 NA 0.012 80-90% NA NA Breast_cancer,Normal NA NA boxplot ALMS1-IT1 ALMS1 intronic transcript 1 chr2 73456764 73459484 + 2721 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ALMS1-IT1 NA 0.282 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot AC064871.3 NA chr2 183083405 183108519 - 25115 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC064871.3 NA 0.106 70-80% Testis 4.906892038 CRC,HCC,Normal,PAAD NA NA boxplot CYP51A1-AS1 CYP51A1 antisense RNA 1 chr7 92134604 92180725 + 46122 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CYP51A1-AS1 NA 0.024 50-60% NA NA Breast_cancer,CRC,HCC NA NA boxplot LINC01624 long intergenic non-protein coding RNA 1624 chr6 170272474 170279887 + 7414 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01624 NA 0.435 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC004540.5 NA chr7 26398593 26494256 + 95664 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC004540.5 NA 0.447 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot OR2R1P olfactory receptor family 2 subfamily R member 1 pseudogene chr7 143488489 143489402 - 914 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=OR2R1P exo_circ_055395,exo_circ_033561 0.235 30-40% Cervix 2.367866175 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-484D2.5 NA chr11 43378882 43385671 - 6790 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-484D2.5 NA 0.024 60-70% Testis 3.342046252 HCC,Normal NA NA boxplot RP11-180D21.3 NA chr1 159466321 159483376 + 17056 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-180D21.3 NA 0.012 10-20% Liver 4.071528012 Normal NA NA boxplot UPK3BP1 NA chr7 77004662 77005774 + 1113 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=UPK3BP1 NA 0.318 70-80% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CTB-61M7.2 NA chr19 54890673 54891420 + 748 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTB-61M7.2 NA 0.282 50-60% Whole Blood 3.818834299 CRC,HCC,Normal,PAAD NA NA boxplot TBCAP3 tubulin folding cofactor A pseudogene 3 chr4 98909537 98909848 - 312 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TBCAP3 NA 0.259 80-90% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CMB9-14B22.1 NA chr11 63469376 63470944 + 1569 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CMB9-14B22.1 NA 0.012 80-90% NA NA Normal NA NA boxplot RP11-252P18.1 NA chr7 66004017 66004137 + 121 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-252P18.1 NA 0.106 80-90% NA NA CRC,HCC,Normal NA NA boxplot RP4-620E11.4 NA chr20 41459354 41461944 - 2591 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-620E11.4 NA 0.094 50-60% NA NA CRC,Normal,PAAD NA NA boxplot LINC01234 long intergenic non-protein coding RNA 1234 chr12 113679459 113773683 - 94225 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01234 NA 0.059 20-30% NA NA Breast_cancer,HCC,PAAD NA NA boxplot AC019181.2 NA chr2 164840749 164849334 + 8586 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC019181.2 exo_circ_008013 0.376 40-50% Kidney 1.592142098 CRC,HCC,Normal,PAAD NA NA boxplot SLC2A1-AS1 SLC2A1 antisense RNA 1 chr1 42959049 42983358 + 24310 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SLC2A1-AS1 NA 0.435 30-40% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up) NA boxplot RP11-142I2.1 NA chr11 121426645 121427416 - 772 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-142I2.1 NA 0.047 60-70% Brain 4.906892038 CRC,Normal NA NA boxplot RP11-268J15.5 NA chr1 36323734 36329221 + 5488 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-268J15.5 NA 0.235 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot OR7E14P olfactory receptor family 7 subfamily E member 14 pseudogene chr11 17013998 17053024 + 39027 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=OR7E14P NA 0.118 20-30% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot PPP1R2P10 protein phosphatase 1 regulatory inhibitor subunit 2 pseudogene 10 chr13 63811014 63811608 - 595 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PPP1R2P10 NA 0.024 50-60% Testis 4.906892038 CHD,CRC NA NA boxplot RP11-331D5.2 NA chr7 157525783 157527325 + 1543 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-331D5.2 NA 0.012 80-90% NA NA Breast_cancer,CRC NA NA boxplot RP11-309L24.2 NA chr7 128850162 128862626 - 12465 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-309L24.2 NA 0.012 90-100% NA NA Breast_cancer,HCC,PAAD NA NA boxplot OSTCP8 oligosaccharyltransferase complex subunit pseudogene 8 chr9 33968071 33968518 - 448 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=OSTCP8 exo_circ_047600 0.024 10-20% NA NA CRC,PAAD NA NA boxplot RP11-487E1.2 NA chr1 21073639 21073753 - 115 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-487E1.2 NA 0.388 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-831F12.3 NA chr14 49677369 49677893 + 525 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-831F12.3 NA 0.012 90-100% NA NA HCC NA NA boxplot HCG23 HLA complex group 23 (non-protein coding) chr6 32390510 32393686 + 3177 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HCG23 NA 0.435 30-40% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot BUD31P2 BUD31 homolog pseudogene 2 chrX 75201491 75201790 + 300 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=BUD31P2 NA 0.012 60-70% NA NA Breast_cancer,HCC NA NA boxplot METTL21EP methyltransferase like 21E, pseudogene chr13 102880099 102896033 + 15935 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=METTL21EP NA 0.694 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-1105G2.3 NA chr12 94277758 94282844 - 5087 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1105G2.3 NA 0.141 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot LINC00843 long intergenic non-protein coding RNA 843 chr10 49972763 49982053 + 9291 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00843 NA 0.435 10-20% NA NA CRC,HCC,Normal,PAAD NA NA boxplot AC112198.1 NA chr5 54808210 54872551 - 64342 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC112198.1 exo_circ_054912 0.565 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),PAAD(down) NA boxplot RP1-58B11.1 NA chr1 5492978 5494674 + 1697 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-58B11.1 NA 0.012 80-90% NA NA Breast_cancer,Normal NA NA boxplot LINC00707 long intergenic non-protein coding RNA 707 chr10 6779598 6842906 + 63309 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00707 NA 0.094 0-10% NA NA HCC,Normal,PAAD NA NA boxplot RP11-460N20.4 NA chr7 65075023 65078780 + 3758 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-460N20.4 NA 0.129 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot TMEM51-AS1 TMEM51 antisense RNA 1 chr1 15111815 15152464 - 40650 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TMEM51-AS1 NA 0.2 10-20% NA NA Breast_cancer,CHD,HCC,Normal,PAAD NA NA boxplot RP4-771M4.3 NA chr1 62896009 62901639 + 5631 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-771M4.3 NA 0.035 70-80% NA NA Breast_cancer,CRC,PAAD NA NA boxplot HNRNPA1P53 heterogeneous nuclear ribonucleoprotein A1 pseudogene 53 chr11 5571247 5572192 - 946 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HNRNPA1P53 NA 0.012 80-90% NA NA CRC NA NA boxplot LARP1BP2 La ribonucleoprotein domain family member 1B pseudogene 2 chr7 106315225 106315743 + 519 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LARP1BP2 NA 0.035 60-70% NA NA CRC,HCC NA NA boxplot AP000640.2 NA chr11 59669312 59676041 + 6730 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AP000640.2 NA 0.035 60-70% Testis 1.749796761 CRC,Normal NA NA boxplot RP5-1172N10.2 NA chrX 41275739 41276778 + 1040 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-1172N10.2 NA 0.012 70-80% NA NA HCC NA NA boxplot RP11-160E2.19 NA chr17 19091069 19091825 - 757 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-160E2.19 NA 0.106 80-90% NA NA CRC,HCC,PAAD NA NA boxplot RP11-406A9.2 NA chr14 82642620 82706825 + 64206 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-406A9.2 NA 0.047 10-20% Testis 2.312857857 Breast_cancer,HCC,Normal,PAAD NA NA boxplot RP11-43F13.3 NA chr5 987180 997308 - 10129 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-43F13.3 NA 0.118 0-10% Heart 1.526494424 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC130689.5 NA chr17 2215482 2216015 - 534 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC130689.5 NA 0.059 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot TARID TCF21 antisense RNA inducing promoter demethylation chr6 133502252 133892802 - 390551 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TARID NA 0.071 50-60% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot BMS1P12 BMS1, ribosome biogenesis factor pseudogene 12 chr9 65189995 65193610 - 3616 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=BMS1P12 NA 0.165 70-80% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-551L14.4 NA chr12 30978308 31006010 - 27703 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-551L14.4 NA 0.153 30-40% Spleen 1.815217268 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot PSMA6P1 proteasome (prosome, macropain) subunit, alpha type, 6 pseudogene 1 chrY 13286638 13287378 + 741 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PSMA6P1 NA 0.988 0-10% NA NA CHD,CRC,HCC,Normal,PAAD CHD(down),CRC(down) NA boxplot CTD-2554C21.2 NA chr19 37817359 37832160 + 14802 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2554C21.2 NA 0.4 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CTD-2522E6.4 NA chrX 47156638 47158199 - 1562 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2522E6.4 NA 0.012 0-10% NA NA Normal NA NA boxplot RP11-426L16.9 NA chr1 112715672 112717796 + 2125 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-426L16.9 NA 0.024 80-90% Testis 4.905942475 Breast_cancer,CRC,Normal NA NA boxplot RP4-553F4.2 NA chr20 33728931 33731828 - 2898 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-553F4.2 NA 0.059 80-90% Testis 4.906892038 CRC,HCC,Normal NA NA boxplot RP11-54O7.16 NA chr1 904834 915976 + 11143 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-54O7.16 NA 0.035 20-30% NA NA PAAD NA NA boxplot AP001062.7 NA chr21 44331234 44335851 + 4618 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AP001062.7 NA 0.671 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-80I3.1 NA chr9 26066675 26118408 + 51734 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-80I3.1 NA 0.012 80-90% NA NA Breast_cancer,HCC NA NA boxplot RP4-535B20.4 NA chr1 65003470 65004087 - 618 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-535B20.4 NA 0.035 80-90% NA NA CRC NA NA boxplot LINC00698 long intergenic non-protein coding RNA 698 chr3 62950430 63125062 + 174633 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00698 NA 0.012 20-30% NA NA Breast_cancer,PAAD NA NA boxplot EIF4BP6 eukaryotic translation initiation factor 4B pseudogene 6 chr7 104667749 104669576 + 1828 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=EIF4BP6 NA 1 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-775D22.3 NA chr7 130173718 130205361 + 31644 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-775D22.3 NA 0.141 40-50% Testis 3.292734084 CRC,HCC,Normal,PAAD NA NA boxplot RP11-328L11.1 NA chr8 95403802 95403894 + 93 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-328L11.1 NA 0.129 90-100% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-325K19.1 NA chr18 60630167 60902726 - 272560 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-325K19.1 NA 0.047 20-30% NA NA Breast_cancer,HCC,Normal NA NA boxplot RP11-673P17.4 NA chr16 27158451 27176587 - 18137 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-673P17.4 NA 0.012 10-20% Testis 4.906892038 Breast_cancer,PAAD NA NA boxplot RP11-242C19.2 NA chrX 30698207 30721932 + 23726 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-242C19.2 NA 0.306 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot MIR9-3HG MIR9-3 host gene chr15 89361579 89398487 + 36909 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MIR9-3HG NA 0.824 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(up) NA boxplot AC093850.1 NA chr2 215804731 215804981 - 251 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC093850.1 NA 0.012 30-40% Testis 4.906892038 PAAD NA NA boxplot RP11-728E14.3 NA chr17 21456513 21460215 - 3703 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-728E14.3 NA 0.247 70-80% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot RP11-885N19.6 NA chr9 138199933 138203325 - 3393 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-885N19.6 NA 0.659 10-20% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down) NA boxplot RP11-34E5.4 NA chr10 96620877 96621707 - 831 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-34E5.4 NA 0.094 40-50% NA NA Breast_cancer,CRC,Normal NA NA boxplot RP11-1060J15.9 NA chr12 27700066 27700574 + 509 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1060J15.9 NA 0.059 70-80% NA NA HCC NA NA boxplot RP11-679B19.1 NA chr16 79202624 79206739 - 4116 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-679B19.1 NA 0.165 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-4K3__A.3 NA chr1 27311240 27311838 + 599 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-4K3__A.3 NA 0.153 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-537A6.9 NA chr10 73381433 73383496 + 2064 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-537A6.9 NA 0.506 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP5-901A4.1 NA chr11 68024809 68030461 - 5653 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-901A4.1 NA 0.035 80-90% NA NA Normal NA NA boxplot RP11-1057B6.1 NA chr2 31852976 31853423 - 448 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1057B6.1 exo_circ_052614 0.059 50-60% NA NA Breast_cancer,CRC,Normal,PAAD NA NA boxplot AC104024.2 NA chr17 16988329 16990177 + 1849 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC104024.2 NA 0.271 50-60% Spleen 4.270633615 CRC,HCC,Normal,PAAD NA NA boxplot RP11-428P16.2 NA chr10 77730766 77734769 + 4004 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-428P16.2 NA 0.706 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),PAAD(down) NA boxplot AC110781.3 NA chr7 1838586 1849931 + 11346 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC110781.3 NA 0.024 10-20% NA NA Breast_cancer,Normal NA NA boxplot RP11-44N21.1 NA chr14 105093609 105099004 + 5396 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-44N21.1 NA 0.129 50-60% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot CCAT2 colon cancer associated transcript 2 (non-protein coding) chr8 127400399 127402150 + 1752 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CCAT2 NA 0.012 90-100% NA NA NA NA NA boxplot RP11-472K22.2 NA chr4 29214398 29221162 + 6765 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-472K22.2 NA 0.012 90-100% Testis 4.906892038 HCC NA NA boxplot BRWD1-AS1 BRWD1 antisense RNA 1 chr21 39315707 39323218 + 7512 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=BRWD1-AS1 NA 0.047 80-90% Testis 4.616620971 CRC,Normal,PAAD NA NA boxplot RAD51-AS1 RAD51 antisense RNA 1 (head to head) chr15 40686724 40695107 - 8384 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RAD51-AS1 NA 0.435 20-30% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot LLNLR-284B4.2 NA chr19 999796 1002757 - 2962 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LLNLR-284B4.2 NA 0.024 80-90% NA NA Breast_cancer,CRC,PAAD NA NA boxplot RP3-477M7.5 NA chr1 8907393 8907744 - 352 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-477M7.5 NA 0.294 30-40% Whole Blood 4.033934199 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot MICE MHC class I polypeptide-related sequence E (pseudogene) chr6 29741731 29748969 - 7239 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MICE NA 0.329 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-404P21.5 NA chr14 96210860 96214818 + 3959 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-404P21.5 NA 0.012 60-70% NA NA NA NA NA boxplot ABHD11-AS1 ABHD11 antisense RNA 1 (tail to tail) chr7 73735038 73736054 + 1017 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ABHD11-AS1 NA 0.341 70-80% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CTC-281F24.3 NA chr17 6657034 6693577 + 36544 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-281F24.3 NA 0.624 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RPL26P19 ribosomal protein L26 pseudogene 19 chr5 56504635 56505072 - 438 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL26P19 NA 1 0-10% NA NA CHD,CRC,HCC,Normal,PAAD CHD(down),CRC(down) NA boxplot SMCR5 Smith-Magenis syndrome chromosome region, candidate 5 (non-protein coding) chr17 17776686 17779529 - 2844 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SMCR5 NA 0.024 80-90% NA NA Breast_cancer,CRC NA NA boxplot RP11-142L4.2 NA chr1 192247505 192247947 + 443 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-142L4.2 NA 0.329 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot AC017048.2 NA chr2 176524879 176531683 - 6805 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC017048.2 NA 0.024 50-60% Bladder 3.6553126 HCC NA NA boxplot RP11-394J1.2 NA chr12 96222797 96223973 - 1177 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-394J1.2 NA 0.353 40-50% Brain 4.126300073 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC104024.1 NA chr17 16975999 16981353 - 5355 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC104024.1 NA 0.271 10-20% Spleen 3.103966561 CRC,HCC,Normal,PAAD NA NA boxplot RP11-536C12.1 NA chr2 46668870 46670778 + 1909 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-536C12.1 NA 0.035 10-20% NA NA Normal,PAAD NA NA boxplot RP11-98D18.9 NA chr1 151790804 151794402 + 3599 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-98D18.9 NA 0.412 10-20% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-755B10.3 NA chr3 57693205 57696596 + 3392 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-755B10.3 NA 0.012 30-40% Testis 4.303070007 Breast_cancer,PAAD NA NA boxplot RP11-277P12.9 NA chr12 10358464 10361045 - 2582 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-277P12.9 NA 0.012 70-80% NA NA CRC NA NA boxplot CPS1-IT1 CPS1 intronic transcript 1 chr2 210617571 210619876 + 2306 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CPS1-IT1 NA 0.024 30-40% NA NA Breast_cancer,PAAD NA NA boxplot LINC00563 long intergenic non-protein coding RNA 563 chr13 46296445 46297844 - 1400 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00563 NA 0.153 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot KRT18P13 keratin 18 pseudogene 13 chr9 97698922 97700734 + 1813 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KRT18P13 NA 0.012 70-80% Thyroid 4.701998234 Breast_cancer NA NA boxplot RP13-401N8.3 NA chr20 25835985 25836832 - 848 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP13-401N8.3 NA 0.259 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-108P20.4 NA chr18 58813880 58834364 + 20485 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-108P20.4 NA 0.012 80-90% NA NA CRC NA NA boxplot RP11-799B12.2 NA chr18 24113637 24121003 - 7367 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-799B12.2 NA 0.024 70-80% NA NA Normal NA NA boxplot AC005013.5 NA chr7 28957667 28959345 + 1679 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC005013.5 NA 0.035 70-80% NA NA Breast_cancer,HCC,Normal NA NA boxplot RP11-161M6.6 NA chr16 968375 969012 - 638 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-161M6.6 NA 0.094 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP4-591C20.9 NA chr20 63861212 63864293 - 3082 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-591C20.9 NA 0.894 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RPL21P10 ribosomal protein L21 pseudogene 10 chr14 77683202 77683989 - 788 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL21P10 NA 0.071 70-80% NA NA CRC,PAAD NA NA boxplot RP11-363D14.1 NA chr2 96527940 96532306 - 4367 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-363D14.1 NA 0.035 30-40% Pituitary 2.882622695 Breast_cancer,HCC,Normal NA NA boxplot NPM1P34 nucleophosmin 1 (nucleolar phosphoprotein B23, numatrin) pseudogene 34 chrX 124280530 124281422 + 893 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NPM1P34 NA 0.012 90-100% NA NA NA NA NA boxplot RP5-1071N3.1 NA chr1 21293290 21299774 + 6485 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-1071N3.1 NA 0.318 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot BNIP3P9 BCL2/adenovirus E1B 19kDa interacting protein 3 pseudogene 9 chr19 19856975 19857527 + 553 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=BNIP3P9 NA 0.012 20-30% NA NA Normal NA NA boxplot RP11-615I2.2 NA chr16 68644248 68646168 - 1921 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-615I2.2 NA 0.024 80-90% Ovary 2.207247436 Breast_cancer,HCC NA NA boxplot CTD-2342J14.6 NA chr19 11368123 11374935 - 6813 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2342J14.6 NA 0.153 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot PIK3CD-AS2 PIK3CD antisense RNA 2 chr1 9672426 9687555 - 15130 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PIK3CD-AS2 NA 0.541 30-40% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-382A20.7 NA chr15 83012661 83061845 + 49185 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-382A20.7 NA 0.235 20-30% Testis 1.069839728 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot SPDYE10P speedy/RINGO cell cycle regulator family member E10, pseudogene chr7 73104201 73111140 - 6940 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SPDYE10P NA 0.024 90-100% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CTB-25B13.5 NA chr19 1440839 1441938 + 1100 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTB-25B13.5 NA 0.165 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-529H20.3 NA chr14 92026566 92026887 + 322 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-529H20.3 NA 0.471 90-100% Testis 4.906892038 CRC,HCC,Normal,PAAD NA NA boxplot RPL29P12 ribosomal protein L29 pseudogene 12 chr5 43666766 43667232 - 467 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL29P12 NA 0.129 90-100% NA NA CHD,HCC,Normal,PAAD NA NA boxplot RPL23AP53 ribosomal protein L23a pseudogene 53 chr8 213186 232231 - 19046 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL23AP53 NA 0.953 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CRC(down) NA boxplot FAM86C2P family with sequence similarity 86, member A pseudogene chr11 67791648 67805336 - 13689 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FAM86C2P NA 0.659 20-30% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot CACNA1C-IT3 CACNA1C intronic transcript 3 chr12 2269776 2288937 + 19162 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CACNA1C-IT3 NA 0.024 40-50% Testis 4.856109075 Breast_cancer,CRC,PAAD NA NA boxplot LINC00407 long intergenic non-protein coding RNA 407 chr13 44651812 44701016 + 49205 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00407 NA 0.012 40-50% Testis 2.802889978 Breast_cancer,Normal NA NA boxplot RPS12P31 ribosomal protein S12 pseudogene 31 chr19 32636078 32636475 + 398 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPS12P31 NA 0.012 50-60% NA NA Normal NA NA boxplot RP11-212P7.1 NA chr7 128570241 128570688 - 448 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-212P7.1 NA 0.929 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down),HCC(up) NA boxplot RP11-247A12.1 NA chr9 129097854 129100266 + 2413 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-247A12.1 NA 0.024 70-80% NA NA Breast_cancer,HCC,Normal NA NA boxplot CCDC144B coiled-coil domain containing 144B (pseudogene) chr17 18537800 18625617 - 87818 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CCDC144B NA 0.918 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CRC(up),PAAD(up) NA boxplot RP11-659G9.1 NA chr11 82957423 82958216 + 794 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-659G9.1 NA 0.035 70-80% NA NA HCC,Normal NA NA boxplot RP11-717F1.2 NA chr21 5553637 5614880 + 61244 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-717F1.2 NA 0.541 10-20% NA NA CRC,HCC,Normal,PAAD CRC(up),HCC(up),PAAD(up) NA boxplot RP11-291L22.4 NA chr10 38453181 38466176 + 12996 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-291L22.4 NA 0.094 80-90% Testis 1.211855587 Breast_cancer,CRC,HCC,PAAD NA NA boxplot RP11-442O1.4 NA chr16 85137150 85149443 + 12294 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-442O1.4 NA 0.341 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-820I16.4 NA chr18 11908712 11909223 + 512 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-820I16.4 NA 0.235 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-611L7.2 NA chr7 6673494 6676366 + 2873 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-611L7.2 NA 0.376 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CTB-178M22.2 uncharacterized LOC101927862 chr5 168229583 168232357 - 2775 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTB-178M22.2 NA 0.082 30-40% NA NA Breast_cancer,CRC,Normal,PAAD NA NA boxplot ABCB10P3 ATP binding cassette subfamily B member 10 pseudogene 3 chr15 28402868 28405033 + 2166 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ABCB10P3 NA 0.188 70-80% Testis 4.906892038 Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP1-101K10.6 NA chr6 152983331 152990541 + 7211 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-101K10.6 NA 0.341 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP1-90G24.10 NA chr22 32205115 32269666 + 64552 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-90G24.10 exo_circ_036692 0.235 40-50% Prostate 1.971707298 CRC,HCC,Normal,PAAD NA NA boxplot CTC-297N7.9 NA chr17 10741267 10769016 - 27750 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-297N7.9 NA 0.012 10-20% NA NA Normal NA NA boxplot LINC01362 long intergenic non-protein coding RNA 1362 chr1 82903183 83166815 + 263633 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01362 NA 0.153 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-27M9.1 NA chr15 39512404 39519854 - 7451 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-27M9.1 NA 0.035 70-80% Testis 4.906892038 Breast_cancer,HCC,Normal NA NA boxplot RP11-63N8.3 NA chr1 21586472 21591187 + 4716 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-63N8.3 NA 0.012 60-70% Whole Blood 2.628912603 Breast_cancer NA NA boxplot TCEB1P19 transcription elongation factor B (SIII), polypeptide 1 pseudogene 19 chr1 88829102 88829419 + 318 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TCEB1P19 NA 0.165 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot DKFZP434A062 uncharacterized LOC26102 chr9 136322303 136327323 - 5021 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DKFZP434A062 NA 0.024 60-70% Testis 4.906892038 Breast_cancer,HCC NA NA boxplot RP11-240L7.4 NA chr9 96246462 96250393 + 3932 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-240L7.4 NA 0.059 30-40% Testis 1.690207603 HCC,Normal NA NA boxplot MTND1P23 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 1 pseudogene 23 chr1 629062 629433 + 372 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MTND1P23 NA 1 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CRC(up),PAAD(down) NA boxplot RP11-278C7.3 NA chr12 32728169 32729024 - 856 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-278C7.3 NA 0.047 70-80% NA NA CRC,Normal,PAAD NA NA boxplot RP11-247I13.11 NA chr22 31454251 31464204 + 9954 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-247I13.11 NA 0.447 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CTD-2186M15.1 NA chr5 32221932 32222347 + 416 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2186M15.1 NA 0.012 90-100% Testis 3.796212797 Normal NA NA boxplot ARAP1-AS1 ARAP1 antisense RNA 1 chr11 72685075 72693808 + 8734 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ARAP1-AS1 NA 0.294 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CYP4Z2P cytochrome P450 family 4 subfamily Z member 2, pseudogene chr1 46843095 46900437 - 57343 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CYP4Z2P NA 0.035 40-50% NA NA CRC,HCC,PAAD NA NA boxplot RP11-34P13.14 NA chr1 139790 140339 - 550 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-34P13.14 NA 0.282 60-70% Whole Blood 1.452431468 CRC,HCC,Normal,PAAD NA NA boxplot LA16c-360A4.1 NA chr16 848525 849065 - 541 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LA16c-360A4.1 NA 0.024 90-100% NA NA Breast_cancer,CRC,Normal NA NA boxplot A2ML1-AS1 A2ML1 antisense RNA 1 chr12 8776219 8830947 - 54729 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=A2ML1-AS1 NA 0.047 30-40% NA NA Normal NA NA boxplot RP11-43N16.4 NA chr19 47487638 47489519 - 1882 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-43N16.4 NA 0.929 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot AC004893.11 NA chr7 99013165 99048240 + 35076 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC004893.11 exo_circ_041600 0.788 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),HCC(down) NA boxplot ASS1P1 argininosuccinate synthetase 1 pseudogene 1 chr6 25023247 25024483 - 1237 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ASS1P1 exo_circ_049797 0.6 10-20% Pituitary 2.934012036 Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-322E11.3 NA chr18 35483431 35483667 - 237 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-322E11.3 NA 0.024 50-60% NA NA Breast_cancer,PAAD NA NA boxplot CTB-134H23.3 NA chr16 29053732 29108108 - 54377 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTB-134H23.3 NA 0.012 60-70% NA NA Breast_cancer,HCC NA NA boxplot RP11-996F15.5 NA chr12 29331434 29331936 - 503 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-996F15.5 NA 0.388 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-413E1.2 NA chr1 89661212 89661353 - 142 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-413E1.2 NA 0.012 60-70% NA NA CRC NA NA boxplot CTA-797E19.2 NA chr11 70324871 70327209 - 2339 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTA-797E19.2 NA 0.071 40-50% Testis 4.906892038 HCC,Normal NA NA boxplot RP11-313P22.1 NA chr21 29657406 29657831 + 426 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-313P22.1 NA 0.071 50-60% NA NA CRC,HCC,Normal NA NA boxplot RAET1K retinoic acid early transcript 1K pseudogene chr6 149998019 150005157 - 7139 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RAET1K NA 0.118 70-80% Testis 3.812407222 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-455P21.3 NA chr1 222815064 222994906 + 179843 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-455P21.3 NA 0.412 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-308D16.1 NA chrX 136947748 136948133 - 386 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-308D16.1 NA 0.012 90-100% NA NA NA NA NA boxplot RP11-509J21.2 NA chr9 3647335 3648338 + 1004 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-509J21.2 exo_circ_046753,exo_circ_016610,exo_circ_029194,exo_circ_006997,exo_circ_026617,exo_circ_037319 0.671 0-10% Testis 2.328223442 CRC,HCC,Normal,PAAD CHD(down),PAAD(down) NA boxplot CTD-2113L7.1 NA chr5 35678484 35827018 - 148535 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2113L7.1 NA 0.094 50-60% Testis 4.906892038 CRC,HCC,Normal,PAAD NA NA boxplot PKNOX2-AS1 PKNOX2 antisense RNA 1 (head to head) chr11 125158461 125164609 - 6149 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PKNOX2-AS1 NA 0.012 70-80% NA NA Breast_cancer,CRC NA NA boxplot CTD-2009A10.1 NA chr16 73543941 73558522 + 14582 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2009A10.1 NA 0.012 50-60% Brain 4.906892038 Breast_cancer,HCC NA NA boxplot HLTF-AS1 HLTF antisense RNA 1 chr3 149086332 149102823 + 16492 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HLTF-AS1 NA 0.106 70-80% NA NA HCC,Normal NA NA boxplot CTD-3099C6.11 NA chr19 52597699 52598887 - 1189 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-3099C6.11 NA 0.035 50-60% NA NA Normal,PAAD NA NA boxplot TNPO1P3 transportin 1 pseudogene 3 chr17 20481330 20483991 - 2662 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TNPO1P3 NA 0.059 90-100% NA NA HCC,Normal NA NA boxplot RN7SL1 RNA, 7SL, cytoplasmic 1 chr14 49586580 49586878 + 299 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RN7SL1 NA 1 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up),HCC(up) Yes boxplot CTD-2228K2.7 NA chr5 473236 480884 + 7649 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2228K2.7 NA 0.247 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD PAAD(up) NA boxplot RP11-299H22.4 NA chr15 62255686 62256421 - 736 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-299H22.4 NA 0.012 70-80% Testis 4.575183437 Breast_cancer NA NA boxplot EFTUD1P1 elongation factor Tu GTP binding domain containing 1 pseudogene 1 chr15 84080168 84126604 + 46437 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=EFTUD1P1 NA 0.329 60-70% Testis 1.388203262 CHD,CRC,HCC,Normal,PAAD NA NA boxplot CTD-2184C24.2 NA chr14 60240121 60248765 - 8645 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2184C24.2 NA 0.635 0-10% Testis 3.398637278 Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot HNRNPA1P16 heterogeneous nuclear ribonucleoprotein A1 pseudogene 16 chr17 2306761 2307715 + 955 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HNRNPA1P16 NA 0.247 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-400F19.18 NA chr17 42509784 42511519 + 1736 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-400F19.18 NA 0.247 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-391L3.1 NA chr16 81385463 81387560 + 2098 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-391L3.1 NA 0.294 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot FARP1-AS1 FARP1 antisense RNA 1 chr13 98435405 98435840 - 436 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FARP1-AS1 exo_circ_026785 0.035 50-60% NA NA CRC,HCC,PAAD NA NA boxplot RP11-204E9.1 NA chr6 21521678 21523783 - 2106 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-204E9.1 NA 0.047 40-50% Brain 3.643698645 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP1-40E16.12 NA chr6 3068045 3068894 - 850 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-40E16.12 NA 0.259 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-527L4.2 NA chr17 43938363 43938959 + 597 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-527L4.2 NA 0.047 60-70% Testis 3.702573042 Breast_cancer,Normal,PAAD NA NA boxplot RP11-122K13.7 NA chr10 133345754 133350726 - 4973 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-122K13.7 NA 0.035 80-90% NA NA CRC NA NA boxplot RP11-266N13.2 NA chr5 59039761 59063503 + 23743 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-266N13.2 NA 0.588 10-20% Testis 1.55242256 Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down) NA boxplot RP11-1223D19.3 NA chr2 110245591 110285856 + 40266 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1223D19.3 NA 0.529 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot OR7A19P olfactory receptor family 7 subfamily A member 19 pseudogene chr12 46592573 46593305 + 733 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=OR7A19P NA 0.059 80-90% NA NA CRC,HCC,PAAD NA NA boxplot DUSP8P5 dual specificity phosphatase 8 pseudogene 5 chr10 73731824 73733638 + 1815 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DUSP8P5 NA 0.4 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD PAAD(up) NA boxplot RP4-794I6.4 NA chr20 3239705 3245382 + 5678 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-794I6.4 NA 0.165 30-40% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot RP11-819M15.2 NA chr11 106824025 106824954 + 930 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-819M15.2 NA 0.059 80-90% NA NA CRC,Normal,PAAD NA NA boxplot AC078899.3 NA chr19 20295089 20303794 + 8706 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC078899.3 NA 0.388 60-70% Thyroid 4.718547985 CRC,HCC,Normal,PAAD NA NA boxplot HMGB1P3 high mobility group box 1 pseudogene 3 chr2 230515023 230515638 + 616 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HMGB1P3 NA 0.976 0-10% NA NA CHD,CRC,HCC,Normal,PAAD CRC(up) NA boxplot AC024592.9 NA chr19 5847467 5858239 + 10773 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC024592.9 NA 0.024 80-90% NA NA Breast_cancer,PAAD NA NA boxplot GTF3C2-AS1 GTF3C2 antisense RNA 1 chr2 27335535 27342599 + 7065 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GTF3C2-AS1 NA 0.459 30-40% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up) NA boxplot HMGB3P1 high mobility group box 3 pseudogene 1 chr20 34833575 34834462 - 888 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HMGB3P1 NA 0.024 50-60% Brain 4.906892038 PAAD NA NA boxplot TVP23CP2 TVP23C pseudogene 2 chr16 14200357 14200979 + 623 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TVP23CP2 NA 0.153 60-70% NA NA HCC,Normal,PAAD NA NA boxplot RP4-631H13.2 NA chr1 52881216 52881730 - 515 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-631H13.2 NA 0.024 90-100% NA NA HCC NA NA boxplot SND1-IT1 SND1 intronic transcript 1 chr7 127997597 128000077 + 2481 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SND1-IT1 NA 0.165 10-20% NA NA CRC,HCC,Normal,PAAD NA NA boxplot HIST1H2APS2 histone cluster 1, H2a, pseudogene 2 chr6 25882026 25882395 - 370 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HIST1H2APS2 NA 0.012 40-50% NA NA Normal NA NA boxplot RP11-338N10.2 NA chr1 7698303 7698872 - 570 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-338N10.2 NA 0.012 30-40% NA NA Normal NA NA boxplot RP11-452H21.1 NA chr11 78324758 78444049 + 119292 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-452H21.1 NA 0.047 80-90% NA NA Breast_cancer,CRC,HCC NA NA boxplot RPSAP51 ribosomal protein SA pseudogene 51 chr12 8742428 8743072 + 645 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPSAP51 NA 0.071 70-80% Testis 3.868709296 CRC,HCC,PAAD NA NA boxplot RP11-968A15.8 NA chr12 54276631 54345083 + 68453 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-968A15.8 NA 0.024 50-60% NA NA HCC NA NA boxplot RP6-43L17.2 NA chrX 87807549 87809883 - 2335 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP6-43L17.2 NA 0.012 20-30% NA NA Normal NA NA boxplot CYCSP6 cytochrome c, somatic pseudogene 6 chr2 78412793 78413094 - 302 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CYCSP6 NA 0.035 60-70% NA NA Normal,PAAD NA NA boxplot AC073130.3 NA chr7 116237929 116327896 - 89968 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC073130.3 exo_circ_033529 0.094 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-766N7.3 NA chr12 64883394 64977522 + 94129 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-766N7.3 NA 0.012 90-100% NA NA Breast_cancer NA NA boxplot ATP11A-AS1 ATP11A antisense RNA 1 chr13 112745449 112754693 - 9245 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ATP11A-AS1 NA 0.024 50-60% Testis 4.043984268 Breast_cancer,Normal,PAAD NA NA boxplot LINC01330 long intergenic non-protein coding RNA 1330 chr3 167864773 167924011 + 59239 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01330 exo_circ_038529 0.624 10-20% NA NA CHD,CRC,HCC,Normal,PAAD CRC(down) NA boxplot CTB-78O21.1 NA chr5 145728360 145729349 - 990 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTB-78O21.1 exo_circ_026418,exo_circ_054795,exo_circ_024255,exo_circ_008901,exo_circ_054796,exo_circ_030198,exo_circ_021993,exo_circ_018190,exo_circ_047405 0.059 90-100% NA NA CRC,HCC,Normal NA NA boxplot AC002117.1 NA chr17 45150400 45161510 - 11111 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC002117.1 exo_circ_046130 0.494 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot BNIP3P7 BCL2/adenovirus E1B 19kDa interacting protein 3 pseudogene 7 chr13 18491904 18492419 + 516 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=BNIP3P7 NA 0.012 90-100% NA NA PAAD NA NA boxplot CTC-425F1.4 NA chr19 12944118 12944487 - 370 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-425F1.4 exo_circ_057849,exo_circ_012551 0.6 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot LLNLR-271C9.1 NA chr19 43690002 43700508 + 10507 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LLNLR-271C9.1 NA 0.012 20-30% NA NA Breast_cancer,HCC NA NA boxplot RP11-977G19.12 NA chr12 56308868 56309449 + 582 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-977G19.12 NA 0.012 60-70% NA NA HCC,Normal NA NA boxplot RP11-430B1.2 NA chr15 52180093 52205874 + 25782 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-430B1.2 NA 0.8 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down) NA boxplot CMB9-55A18.1 NA chr11 58611119 58612642 - 1524 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CMB9-55A18.1 NA 0.424 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-92K15.3 NA chr8 80032724 80033300 - 577 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-92K15.3 NA 0.412 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot GS1-124K5.9 NA chr7 66505155 66506223 - 1069 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GS1-124K5.9 NA 0.024 90-100% Testis 1.993309708 PAAD NA NA boxplot RP11-292E2.2 NA chr3 153376831 153377562 + 732 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-292E2.2 NA 0.059 50-60% Testis 4.390912085 HCC,Normal NA NA boxplot RP5-1184F4.5 NA chr20 32449755 32453607 + 3853 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-1184F4.5 NA 0.118 90-100% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP3-405J10.4 NA chr12 50219604 50229984 + 10381 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-405J10.4 NA 0.012 90-100% NA NA Breast_cancer,CRC NA NA boxplot RP11-473L15.3 NA chr5 44495618 44510282 - 14665 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-473L15.3 NA 0.118 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-567M16.2 NA chr18 79610747 79612303 + 1557 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-567M16.2 NA 0.024 60-70% NA NA HCC NA NA boxplot RP11-20I23.6 NA chr16 2569043 2571936 - 2894 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-20I23.6 NA 0.141 70-80% NA NA CRC,HCC,PAAD NA NA boxplot RP11-274A11.4 NA chr16 81630193 81632038 + 1846 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-274A11.4 NA 0.812 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot AC005624.2 NA chr19 2458935 2462185 - 3251 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC005624.2 NA 0.047 80-90% Testis 4.906892038 Breast_cancer,CRC,HCC,Normal NA NA boxplot LINC01475 long intergenic non-protein coding RNA 1475 chr10 99526350 99531177 - 4828 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01475 NA 0.106 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot GLDCP1 glycine dehydrogenase (decarboxylase) pseudogene 1 chr4 56593004 56595681 + 2678 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GLDCP1 NA 0.047 10-20% Liver 2.359166427 Breast_cancer,CRC,HCC,Normal NA NA boxplot FTH1P1 ferritin, heavy polypeptide 1 pseudogene chr1 37544763 37545294 + 532 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FTH1P1 NA 0.012 90-100% NA NA Breast_cancer,HCC NA NA boxplot RP13-143G15.4 NA chr6 135991936 136225751 - 233816 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP13-143G15.4 NA 0.188 40-50% Heart 1.445169762 Breast_cancer,HCC,Normal,PAAD NA NA boxplot RP11-196H14.4 NA chr12 64108763 64120489 - 11727 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-196H14.4 NA 0.059 70-80% Testis 1.812565 HCC,PAAD NA NA boxplot RP11-114F3.4 NA chr12 64451591 64452901 - 1311 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-114F3.4 NA 0.035 50-60% NA NA Breast_cancer,Normal,PAAD NA NA boxplot SCART1 scavenger receptor protein family member chr10 133453928 133523558 + 69631 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SCART1 NA 0.482 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-708J19.1 NA chr3 47379089 47380999 - 1911 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-708J19.1 NA 0.435 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot WTAPP1 Wilms tumor 1 associated protein pseudogene 1 chr11 102746968 102836766 + 89799 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=WTAPP1 NA 0.094 60-70% Testis 2.644247363 Breast_cancer,HCC,Normal,PAAD NA NA boxplot AC009274.6 NA chr7 130645225 130645594 - 370 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC009274.6 NA 0.035 70-80% Ovary 4.906892038 CRC,PAAD NA NA boxplot RPL12P10 ribosomal protein L12 pseudogene 10 chr7 22881893 22882390 + 498 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL12P10 NA 0.059 70-80% NA NA Breast_cancer,Normal,PAAD NA NA boxplot RP11-484D2.3 NA chr11 43466392 43466871 + 480 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-484D2.3 NA 0.141 30-40% NA NA CRC,Normal,PAAD NA NA boxplot RP11-502F1.1 NA chr17 56471142 56473647 + 2506 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-502F1.1 NA 0.012 70-80% NA NA Breast_cancer,HCC NA NA boxplot RP11-799B12.4 NA chr18 24159509 24162211 - 2703 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-799B12.4 NA 0.047 60-70% NA NA Breast_cancer,CRC,Normal,PAAD NA NA boxplot SETP16 SET pseudogene 16 chr11 118833846 118834556 - 711 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SETP16 NA 0.035 40-50% Testis 4.906892038 CRC,Normal NA NA boxplot TMEM30C transmembrane protein 30C chr3 100185687 100211766 + 26080 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TMEM30C NA 0.012 70-80% Testis 4.868402224 NA NA NA boxplot RP11-556H2.2 NA chr16 79105957 79110882 + 4926 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-556H2.2 NA 0.047 50-60% NA NA Breast_cancer,HCC,Normal NA NA boxplot RP11-434H6.7 NA chr3 129163606 129163940 - 335 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-434H6.7 NA 0.224 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot AC008074.5 NA chr2 64450096 64450524 + 429 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC008074.5 NA 0.024 60-70% NA NA Breast_cancer,Normal,PAAD NA NA boxplot NCRNA00250 non-protein coding RNA 250 chr8 134838069 134842637 + 4569 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NCRNA00250 NA 0.012 70-80% NA NA NA NA NA boxplot AC000120.7 NA chr7 92200014 92206857 - 6844 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC000120.7 NA 0.494 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-26L20.3 NA chr16 55259969 55333588 - 73620 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-26L20.3 NA 0.024 80-90% NA NA PAAD NA NA boxplot RPSAP11 ribosomal protein SA pseudogene 11 chr3 32190747 32191627 + 881 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPSAP11 NA 0.012 70-80% NA NA Breast_cancer NA NA boxplot RP11-410D17.2 NA chr16 58733912 59108974 + 375063 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-410D17.2 exo_circ_011253 0.235 60-70% Testis 4.811152115 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP1-144F13.3 NA chr1 39633416 39633903 + 488 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-144F13.3 NA 0.012 80-90% NA NA Breast_cancer,HCC NA NA boxplot RP11-367J11.2 NA chr4 7030554 7046231 - 15678 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-367J11.2 NA 0.706 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot RP11-557C18.3 NA chr8 123002560 123030751 + 28192 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-557C18.3 NA 0.071 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot EZH2P1 enhancer of zeste 2 polycomb repressive complex 2 subunit pseudogene 1 chr21 35599732 35600022 - 291 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=EZH2P1 NA 0.047 70-80% NA NA HCC,Normal NA NA boxplot LINC01378 long intergenic non-protein coding RNA 1378 chr4 117406166 117691188 + 285023 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01378 NA 0.012 0-10% NA NA Breast_cancer,PAAD NA NA boxplot RP1-153P14.3 NA chr6 37543553 37547280 - 3728 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-153P14.3 NA 0.012 30-40% NA NA Breast_cancer,Normal NA NA boxplot C9orf41-AS1 C9orf41 antisense RNA 1 chr9 74952968 74996293 + 43326 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=C9orf41-AS1 NA 0.071 60-70% NA NA Breast_cancer,CRC,Normal,PAAD NA NA boxplot RP11-723J4.3 NA chr18 35972151 35973916 + 1766 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-723J4.3 NA 0.518 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot LINC00390 long intergenic non-protein coding RNA 390 chr13 44106378 44137236 - 30859 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00390 NA 0.012 90-100% Testis 4.03298935 CRC,Normal NA NA boxplot RP3-324O17.8 NA chr20 31580890 31581214 + 325 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-324O17.8 NA 0.035 60-70% NA NA CRC NA NA boxplot RP11-19C24.1 NA chr4 66003281 66016792 + 13512 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-19C24.1 NA 0.012 30-40% NA NA NA NA NA boxplot AP003774.1 NA chr11 64325050 64329504 - 4455 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AP003774.1 NA 0.412 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CTA-339C12.1 NA chr7 101822247 101824729 - 2483 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTA-339C12.1 NA 0.012 90-100% NA NA Breast_cancer,CRC NA NA boxplot MIR8069-1 microRNA 8069-1 chr21 6858539 6897263 + 38725 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MIR8069-1 NA 0.024 90-100% NA NA CRC,HCC NA NA boxplot AP004782.1 NA chr11 133064697 133068129 + 3433 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AP004782.1 NA 0.012 30-40% NA NA Breast_cancer,Normal NA NA boxplot LINC00528 long intergenic non-protein coding RNA 528 chr22 17777322 17779481 + 2160 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00528 NA 0.694 30-40% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-426K3.1 NA chr2 101068378 101068656 + 279 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-426K3.1 NA 0.035 20-30% NA NA CRC,Normal NA NA boxplot RP11-603J24.4 NA chr12 56029649 56041806 - 12158 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-603J24.4 NA 0.024 30-40% Testis 4.222887327 Normal NA NA boxplot CTC-459F4.6 NA chr19 27803538 27804060 + 523 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-459F4.6 NA 0.035 50-60% NA NA CRC,PAAD NA NA boxplot NUDT19P5 nudix hydrolase 19 pseudogene 5 chr4 158182825 158183393 + 569 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NUDT19P5 NA 0.106 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-415J8.5 NA chr1 33350352 33363245 + 12894 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-415J8.5 NA 0.012 80-90% Testis 4.298585622 CRC NA NA boxplot RP5-1047A19.4 NA chr8 144992914 144994837 + 1924 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-1047A19.4 NA 0.071 60-70% NA NA HCC,Normal,PAAD NA NA boxplot RP11-196G11.2 NA chr16 31043150 31049868 + 6719 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-196G11.2 NA 0.059 20-30% NA NA CRC,Normal NA NA boxplot CTB-31O20.9 NA chr19 1875016 1875992 + 977 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTB-31O20.9 NA 0.129 80-90% NA NA HCC,Normal,PAAD NA NA boxplot RPS2P25 ribosomal protein S2 pseudogene 25 chr5 85762559 85763138 + 580 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPS2P25 NA 0.012 30-40% NA NA Breast_cancer,PAAD NA NA boxplot FLJ37035 uncharacterized LOC399821 chr10 125700436 125719566 - 19131 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FLJ37035 NA 0.376 30-40% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-266A24.1 NA chr11 23164900 23203161 + 38262 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-266A24.1 NA 0.729 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down),PAAD(down) NA boxplot AC013410.2 NA chr2 173705948 173706148 - 201 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC013410.2 NA 0.012 90-100% NA NA HCC NA NA boxplot RP11-804H8.6 NA chr3 50669989 50672048 + 2060 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-804H8.6 NA 0.329 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-404F10.2 NA chr1 160670778 160699761 + 28984 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-404F10.2 NA 0.588 0-10% Testis 2.545081599 Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot AC096664.2 NA chr2 63717122 63717899 + 778 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC096664.2 NA 0.024 60-70% Testis 4.213068592 Breast_cancer,CRC,PAAD NA NA boxplot AP001432.14 NA chr21 37221419 37237744 + 16326 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AP001432.14 NA 0.106 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-785H20.1 NA chr8 121884724 121904273 + 19550 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-785H20.1 NA 0.012 60-70% Testis 4.906892038 NA NA NA boxplot PTGER4P2 NA chr9 62843919 62844170 + 252 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PTGER4P2 NA 0.082 60-70% Spleen 2.027964889 CRC,HCC,Normal,PAAD NA NA boxplot AC099552.4 NA chr7 155196563 155198455 - 1893 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC099552.4 NA 0.047 40-50% Kidney 4.578365277 HCC,PAAD NA NA boxplot AC009495.4 NA chr2 165794857 165846091 - 51235 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC009495.4 NA 0.106 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-392E22.5 NA chr9 38543104 38543446 - 343 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-392E22.5 NA 0.024 80-90% Testis 1.620738972 CRC,PAAD NA NA boxplot RP11-473O4.3 NA chr8 129939856 129949394 + 9539 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-473O4.3 NA 0.012 30-40% NA NA Breast_cancer,Normal NA NA boxplot AF131215.9 NA chr8 11104691 11106704 - 2014 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AF131215.9 NA 0.576 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-713H12.1 NA chr17 8561230 8561576 + 347 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-713H12.1 NA 0.035 80-90% Artery 2.163624353 HCC,Normal,PAAD NA NA boxplot RP11-527L4.6 NA chr17 43927563 43932622 + 5060 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-527L4.6 NA 0.024 30-40% Testis 4.348113855 Breast_cancer,Normal NA NA boxplot RP11-317N12.1 NA chr8 33604856 34039008 + 434153 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-317N12.1 NA 0.024 10-20% Testis 3.746998843 Breast_cancer,Normal,PAAD NA NA boxplot MED28P7 mediator complex subunit 28 pseudogene 7 chr20 25669857 25670386 - 530 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MED28P7 NA 0.035 70-80% NA NA HCC,Normal NA NA boxplot AP000266.7 NA chr21 32306464 32308737 - 2274 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AP000266.7 NA 0.071 20-30% Testis 3.206734222 Normal,PAAD NA NA boxplot RP11-309M23.1 NA chrY 990221 994365 + 4145 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-309M23.1 NA 0.012 90-100% NA NA CRC NA NA boxplot AP001627.1 NA chr21 42733594 42741758 - 8165 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AP001627.1 NA 0.176 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot DSCAM-IT1 DSCAM intronic transcript 1 chr21 40615378 40630767 - 15390 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DSCAM-IT1 NA 0.012 0-10% NA NA Breast_cancer,PAAD NA NA boxplot RP11-523H24.3 NA chr13 19674624 19675884 + 1261 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-523H24.3 NA 0.141 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-810D13.1 NA chr4 98409290 98409763 + 474 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-810D13.1 NA 0.047 20-30% NA NA CRC,Normal,PAAD NA NA boxplot RP11-195M16.1 NA chr1 109884176 109886264 - 2089 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-195M16.1 NA 0.165 60-70% Testis 4.906892038 CRC,HCC,Normal,PAAD NA NA boxplot RP11-516A11.1 NA chrX 68070520 68071767 - 1248 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-516A11.1 NA 0.082 50-60% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot RP11-348F1.2 NA chrX 51396511 51465661 + 69151 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-348F1.2 NA 0.059 20-30% NA NA CRC,HCC NA NA boxplot RP11-369J21.12 NA chr10 80091411 80091867 - 457 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-369J21.12 NA 0.024 30-40% NA NA Breast_cancer,Normal,PAAD NA NA boxplot RBMS3-AS3 RBMS3 antisense RNA 3 chr3 29264194 29290726 - 26533 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RBMS3-AS3 NA 0.118 40-50% NA NA HCC,Normal,PAAD NA NA boxplot IMMP1LP2 inner mitochondrial membrane peptidase subunit 1 pseudogene 2 chr12 113015607 113016098 + 492 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=IMMP1LP2 NA 0.012 20-30% NA NA Normal NA NA boxplot RP11-440L14.3 NA chr4 836512 837224 - 713 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-440L14.3 NA 0.012 60-70% NA NA Breast_cancer NA NA boxplot RP11-508N22.9 NA chr10 38164648 38212417 + 47770 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-508N22.9 NA 0.082 50-60% Testis 4.906892038 Breast_cancer,CRC,HCC,Normal NA NA boxplot SDCBPP1 syndecan binding protein (syntenin) pseudogene 1 chr10 6293100 6294684 - 1585 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SDCBPP1 NA 0.012 70-80% Whole Blood 4.906892038 HCC NA NA boxplot DLEU2L deleted in lymphocytic leukemia 2-like chr1 63547082 63550636 + 3555 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DLEU2L NA 0.176 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-597A11.11 NA chr14 19499737 19677923 + 178187 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-597A11.11 NA 0.012 50-60% NA NA PAAD NA NA boxplot KLKP1 kallikrein pseudogene 1 chr19 50882096 50896398 - 14303 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KLKP1 NA 0.024 10-20% Prostate 4.210377014 Breast_cancer,PAAD NA NA boxplot TLK1P1 tousled like kinase 1 pseudogene 1 chr9 122685933 122688372 + 2440 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TLK1P1 NA 0.047 90-100% Testis 4.906892038 Breast_cancer,CRC,Normal,PAAD NA NA boxplot RP11-143M1.3 NA chr9 100804 102941 - 2138 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-143M1.3 NA 0.012 70-80% Testis 4.175530525 Breast_cancer NA NA boxplot RP11-3P17.4 NA chr3 161426427 161448242 + 21816 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-3P17.4 NA 0.494 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot CTD-2576F9.1 NA chr15 94855474 94856914 + 1441 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2576F9.1 NA 0.094 60-70% Testis 2.307096302 Breast_cancer,CRC,HCC,Normal NA NA boxplot RP5-997D16.2 NA chr1 34850694 34851555 + 862 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-997D16.2 NA 0.118 20-30% NA NA HCC,Normal,PAAD NA NA boxplot LUADT1 lung adenocarcinoma associated transcript 1 chr6 147158925 147180992 + 22068 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LUADT1 NA 0.012 80-90% NA NA PAAD NA NA boxplot RP11-673E1.3 NA chr4 143911514 143912053 - 540 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-673E1.3 NA 0.624 10-20% NA NA CRC,HCC,Normal,PAAD CHD(down),PAAD(down) NA boxplot AC013472.3 NA chr2 26984776 27014612 - 29837 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC013472.3 NA 0.047 60-70% Testis 3.470160176 HCC,PAAD NA NA boxplot LLNLF-176F2.1 NA chr19 200499 201174 - 676 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LLNLF-176F2.1 NA 0.082 80-90% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-15J10.1 NA chr9 65287914 65323015 - 35102 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-15J10.1 NA 0.776 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-13K12.2 NA chr17 77526998 77536592 + 9595 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-13K12.2 NA 0.024 70-80% NA NA Breast_cancer,CRC NA NA boxplot CTB-32O4.3 NA chr19 29220864 29221666 + 803 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTB-32O4.3 NA 0.024 50-60% NA NA Breast_cancer,HCC,Normal NA NA boxplot LINC00392 long intergenic non-protein coding RNA 392 chr13 73564244 73588070 + 23827 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00392 NA 0.012 0-10% Testis 4.568219204 HCC NA NA boxplot RP11-284M14.1 NA chr4 142933195 143184861 - 251667 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-284M14.1 exo_circ_054483,exo_circ_049234,exo_circ_054484,exo_circ_043993,exo_circ_054485 0.424 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot MIR100HG mir-100-let-7a-2 cluster host gene chr11 122028327 122556721 - 528395 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MIR100HG exo_circ_010753 0.435 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD PAAD(up) NA boxplot RP1-18D14.7 NA chr1 47225797 47230750 + 4954 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-18D14.7 NA 0.635 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),HCC(down),PAAD(down) NA boxplot RP11-69I8.2 NA chr6 131901963 131920565 + 18603 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-69I8.2 exo_circ_052726 0.024 40-50% NA NA Breast_cancer,HCC,PAAD NA NA boxplot RP11-439A17.10 NA chr1 121087528 121116676 - 29149 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-439A17.10 NA 0.106 40-50% Thyroid 4.906892038 CRC,HCC,Normal,PAAD NA NA boxplot RP11-297P16.3 NA chr4 103548745 103624534 + 75790 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-297P16.3 NA 0.024 10-20% Testis 4.034493086 HCC NA NA boxplot BET1P1 Bet1 golgi vesicular membrane trafficking protein pseudogene 1 chr7 150749736 150750094 + 359 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=BET1P1 NA 0.2 70-80% NA NA CRC,HCC,Normal NA NA boxplot MTND4P12 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 pseudogene 12 chr5 134926660 134928036 - 1377 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MTND4P12 NA 0.988 0-10% NA NA CHD,CRC,HCC,Normal,PAAD CHD(up),CRC(up) NA boxplot LINC01433 long intergenic non-protein coding RNA 1433 chr20 4193065 4195943 + 2879 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01433 NA 0.094 80-90% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot RP5-991C6.4 NA chr6 81724722 81736353 - 11632 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-991C6.4 NA 0.071 50-60% Testis 4.86203553 Breast_cancer,CRC,HCC NA NA boxplot AC144652.1 NA chr7 155295918 155297541 - 1624 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC144652.1 NA 0.835 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-461L13.3 NA chr4 152320544 152321044 - 501 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-461L13.3 exo_circ_054510 0.071 70-80% NA NA CRC,HCC,Normal NA NA boxplot RP3-525N10.2 NA chr6 68629962 68635027 - 5066 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-525N10.2 NA 0.082 70-80% NA NA Breast_cancer,CRC,Normal NA NA boxplot RPEP4 ribulose-5-phosphate-3-epimerase pseudogene 4 chr22 29608900 29609501 + 602 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPEP4 NA 0.047 80-90% Cervix 4.087195613 CRC NA NA boxplot RP11-32K4.1 NA chr8 63687179 64368558 - 681380 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-32K4.1 NA 0.012 90-100% NA NA Breast_cancer NA NA boxplot RP13-941N14.1 NA chr12 121580792 121593504 + 12713 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP13-941N14.1 NA 0.235 40-50% Testis 2.484879383 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot MARK2P13 MAP/microtubule affinity-regulating kinase 2 pseudogene 13 chr7 36109024 36110872 - 1849 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MARK2P13 NA 0.012 90-100% Skin 3.135783599 Breast_cancer,CRC NA NA boxplot RP11-379H18.1 NA chr7 35695214 35699413 + 4200 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-379H18.1 NA 0.894 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot VIM2P vimentin 2, pseudogene (functional) chr6 126602356 126603649 - 1294 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=VIM2P NA 0.012 0-10% NA NA Breast_cancer,PAAD NA NA boxplot CISTR chondrogenesis-associated transcript chr12 53750447 53757034 - 6588 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CISTR NA 0.012 80-90% NA NA Breast_cancer,HCC NA NA boxplot RP4-734G22.3 NA chr1 10639241 10654333 + 15093 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-734G22.3 NA 0.447 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-536C10.12 NA chr14 18634955 18637208 - 2254 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-536C10.12 NA 0.447 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-92B11.3 NA chr17 16788248 16789234 - 987 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-92B11.3 NA 0.012 30-40% Testis 2.139298121 PAAD NA NA boxplot RP11-894P9.1 NA chr14 103682362 103684015 - 1654 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-894P9.1 NA 0.082 60-70% NA NA CRC,HCC,Normal NA NA boxplot GS1-590J6.3 NA chrX 11668401 11757718 - 89318 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GS1-590J6.3 NA 0.047 60-70% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot RPS15AP24 ribosomal protein S15a pseudogene 24 chr8 30117384 30117779 - 396 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPS15AP24 NA 0.141 80-90% NA NA CHD,Normal,PAAD NA NA boxplot AC019055.1 NA chr2 19711715 19717576 + 5862 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC019055.1 NA 0.012 80-90% Testis 4.906892038 HCC NA NA boxplot RP1-63G5.8 NA chr22 37371684 37372858 + 1175 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-63G5.8 NA 0.012 80-90% NA NA Breast_cancer,Normal NA NA boxplot RP5-1033H22.2 NA chr1 93592199 93605573 + 13375 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-1033H22.2 NA 0.165 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-673E1.1 NA chr4 143912331 143982454 + 70124 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-673E1.1 NA 0.859 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down),HCC(down) NA boxplot RP11-1079K10.5 NA chr17 49457861 49461749 - 3889 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1079K10.5 NA 0.012 10-20% Testis 4.906892038 Breast_cancer,HCC NA NA boxplot CAP1P2 CAP1 pseudogene 2 chr10 43604843 43606251 - 1409 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CAP1P2 NA 0.318 80-90% Testis 4.49563567 CRC,HCC,Normal,PAAD NA NA boxplot AC008278.2 NA chr2 15564170 15573868 + 9699 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC008278.2 NA 0.165 50-60% Testis 4.906892038 CRC,HCC,Normal,PAAD NA NA boxplot RP11-21L23.2 NA chr11 76800364 76804555 + 4192 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-21L23.2 NA 0.047 0-10% NA NA Breast_cancer,Normal,PAAD NA NA boxplot RP11-126O1.4 NA chr18 58672613 58752730 - 80118 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-126O1.4 NA 0.012 80-90% NA NA CRC NA NA boxplot RP11-505K9.5 NA chr16 84085979 84086590 - 612 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-505K9.5 NA 0.129 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-752G15.8 NA chr15 82744223 82750289 + 6067 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-752G15.8 NA 0.012 40-50% NA NA NA NA NA boxplot RP11-677M14.2 NA chr11 124744634 124746337 - 1704 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-677M14.2 NA 0.776 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(up),HCC(up) NA boxplot RP11-497E19.1 NA chr14 85524432 85529988 - 5557 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-497E19.1 NA 0.118 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-257O5.2 NA chr17 54956760 54958426 - 1667 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-257O5.2 NA 0.271 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot LINC01529 long intergenic non-protein coding RNA 1529 chr19 35785697 35797902 - 12206 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01529 NA 0.012 60-70% NA NA Breast_cancer,Normal NA NA boxplot RP11-932O9.9 NA chr15 30616958 30617749 + 792 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-932O9.9 NA 0.271 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CTD-2515H24.1 NA chr15 57555951 57556379 - 429 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2515H24.1 NA 0.012 80-90% Testis 4.498282605 PAAD NA NA boxplot RP11-758H9.2 NA chr17 59618553 59619714 - 1162 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-758H9.2 NA 0.353 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CHCHD2P2 coiled-coil-helix-coiled-coil-helix domain containing 2 pseudogene 2 chr5 69333929 69334249 + 321 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CHCHD2P2 NA 0.059 50-60% NA NA CHD,PAAD NA NA boxplot AF131216.6 NA chr8 11315859 11325429 - 9571 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AF131216.6 NA 0.141 40-50% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot CTD-2588E21.1 NA chr14 56117316 56117990 - 675 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2588E21.1 exo_circ_045715 0.459 10-20% NA NA CRC,HCC,Normal,PAAD NA NA boxplot AC013463.2 NA chr2 164912312 165208261 + 295950 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC013463.2 NA 0.506 20-30% Kidney 4.906892038 CRC,HCC,Normal,PAAD NA NA boxplot HMGN1P16 high mobility group nucleosome binding domain 1 pseudogene 16 chr5 148221360 148221642 - 283 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HMGN1P16 NA 0.012 80-90% NA NA NA NA NA boxplot FTH1P2 ferritin, heavy polypeptide 1 pseudogene 2 chr1 228687415 228687826 + 412 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FTH1P2 NA 1 0-10% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP1-102K2.8 NA chr22 30246205 30246998 + 794 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-102K2.8 NA 0.012 80-90% NA NA Breast_cancer,HCC NA NA boxplot AC006547.15 NA chr22 20064552 20065705 - 1154 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC006547.15 NA 0.4 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot RP11-131J3.1 NA chr1 108420689 108433184 + 12496 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-131J3.1 NA 0.024 0-10% NA NA PAAD NA NA boxplot CH507-338C24.1 NA chr21 7669397 7681742 - 12346 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CH507-338C24.1 NA 0.694 10-20% NA NA CRC,HCC,Normal,PAAD CRC(up),HCC(up),PAAD(up) NA boxplot CTD-2574D22.3 NA chr16 29913144 29915337 - 2194 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2574D22.3 NA 0.129 50-60% NA NA Breast_cancer,CRC,Normal,PAAD NA NA boxplot LA16c-312E8.2 NA chr16 1408834 1412248 + 3415 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LA16c-312E8.2 NA 0.012 90-100% Testis 4.78516533 CRC NA NA boxplot RP11-301G7.1 NA chr8 40519565 40520158 - 594 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-301G7.1 NA 0.024 30-40% NA NA Breast_cancer,Normal,PAAD NA NA boxplot RP11-923I11.3 NA chr12 51809705 51810600 - 896 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-923I11.3 NA 0.024 80-90% NA NA CRC,Normal NA NA boxplot AC016292.3 NA chr17 1858039 1858446 - 408 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC016292.3 NA 0.765 20-30% NA NA CRC,HCC,Normal,PAAD HCC(up) NA boxplot AC002075.4 NA chr7 93669826 93670077 - 252 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC002075.4 NA 0.906 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot NEXN-AS1 NEXN antisense RNA 1 chr1 77881348 77889539 - 8192 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NEXN-AS1 NA 0.718 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),HCC(down) NA boxplot RP11-685B24.1 NA chr11 88165575 88167691 - 2117 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-685B24.1 NA 0.035 80-90% NA NA Breast_cancer,CRC,Normal NA NA boxplot ZACNP1 zinc activated ligand-gated ion channel pseudogene 1 chr4 108415220 108416639 + 1420 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ZACNP1 NA 0.012 30-40% NA NA Breast_cancer,Normal NA NA boxplot RP11-532E4.2 NA chr11 1242261 1249676 - 7416 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-532E4.2 NA 0.012 40-50% NA NA HCC NA NA boxplot RP11-248G5.8 NA chr13 52167709 52291557 - 123849 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-248G5.8 exo_circ_039989,exo_circ_011009 0.882 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down),PAAD(up) NA boxplot RP4-541C22.5 NA chr11 33665220 33696701 - 31482 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-541C22.5 NA 0.059 40-50% Kidney 1.786120183 Breast_cancer,CRC,HCC,Normal NA NA boxplot RP11-100G15.10 NA chr9 92150382 92157445 - 7064 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-100G15.10 NA 0.082 30-40% Thyroid 2.649072854 CRC,HCC,Normal NA NA boxplot BMPR1APS1 bone morphogenetic protein receptor type IA pseudogene 1 chr6 129157523 129159120 - 1598 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=BMPR1APS1 NA 0.129 60-70% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP5-1024G6.5 NA chr1 53238610 53242783 + 4174 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-1024G6.5 NA 0.271 30-40% Testis 2.526095616 CRC,HCC,Normal,PAAD NA NA boxplot RP11-331F4.1 NA chr16 75192465 75193247 - 783 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-331F4.1 NA 0.012 80-90% NA NA NA NA NA boxplot HNRNPA3P4 heterogeneous nuclear ribonucleoprotein A3 pseudogene 4 chr6 48149203 48150005 - 803 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HNRNPA3P4 NA 0.012 90-100% NA NA Normal,PAAD NA NA boxplot RP11-109N23.6 NA chr14 72960595 72961993 + 1399 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-109N23.6 NA 0.059 60-70% NA NA Breast_cancer,CRC,Normal NA NA boxplot CTD-2319I12.10 NA chr17 60101759 60102919 - 1161 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2319I12.10 NA 0.929 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-529A4.4 NA chr11 89944035 89949402 + 5368 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-529A4.4 NA 0.012 40-50% Testis 4.906892038 HCC,Normal NA NA boxplot FAM86HP family with sequence similarity 86, member A pseudogene chr3 130099092 130111472 - 12381 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FAM86HP NA 0.247 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot DPPA5P4 developmental pluripotency associated 5 pseudogene 4 chr14 75292131 75292495 - 365 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DPPA5P4 NA 0.012 90-100% NA NA Breast_cancer,Normal NA NA boxplot RP11-274B21.4 NA chr7 128652841 128653243 + 403 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-274B21.4 NA 0.494 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-193J6.1 NA chr1 3205988 3208664 + 2677 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-193J6.1 NA 0.012 90-100% NA NA Breast_cancer NA NA boxplot ACTG1P14 actin gamma 1 pseudogene 14 chr9 6834456 6835577 + 1122 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ACTG1P14 NA 0.141 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC011366.3 NA chr5 109883182 109884751 + 1570 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC011366.3 NA 0.012 60-70% Testis 4.906892038 Breast_cancer NA NA boxplot FAM86MP family with sequence similarity 86, member A pseudogene chr4 9692495 9702954 + 10460 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FAM86MP NA 0.012 40-50% Pituitary 4.906892038 Breast_cancer NA NA boxplot RP11-182L21.5 NA chr10 79663192 79664786 + 1595 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-182L21.5 NA 0.2 70-80% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CTA-150C2.20 NA chr22 39070414 39070671 + 258 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTA-150C2.20 NA 0.047 10-20% Spleen 4.214105326 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot ANKRD62P1-PARP4P3 ANKRD62P1-PARP4P3 readthrough, transcribed pseudogene chr22 16654066 16675540 - 21475 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ANKRD62P1-PARP4P3 NA 0.024 80-90% Testis 3.527486552 Normal NA NA boxplot CTD-2008E3.1 NA chr5 31558573 31559875 + 1303 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2008E3.1 NA 0.129 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot AC012368.1 NA chr2 64086353 64088246 - 1894 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC012368.1 NA 0.059 70-80% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot SPATA41 spermatogenesis associated 41 (non-protein coding) chr15 100344457 100349655 - 5199 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SPATA41 NA 0.165 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC091729.9 NA chr7 1160374 1165267 + 4894 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC091729.9 NA 0.706 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down) NA boxplot DNM1P47 dynamin 1 pseudogene 47 chr15 101751032 101794302 + 43271 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DNM1P47 NA 0.671 20-30% Testis 1.05830365 Breast_cancer,CRC,HCC,Normal,PAAD CRC(up),PAAD(up) NA boxplot AC011752.1 NA chr2 21317660 21561313 + 243654 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC011752.1 NA 0.035 60-70% Testis 4.811394909 Breast_cancer,HCC,PAAD NA NA boxplot FAM224B family with sequence similarity 224 member B (non-protein coding) chrY 17552800 17579754 - 26955 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FAM224B NA 0.059 70-80% Testis 3.042911358 HCC,PAAD NA NA boxplot FHP1 fumarate hydratase pseudogene 1 chr13 42255873 42256575 + 703 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FHP1 NA 0.2 70-80% Testis 2.517758757 HCC,Normal,PAAD NA NA boxplot RP11-91J19.3 NA chr8 450714 451343 - 630 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-91J19.3 NA 0.247 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot AC112721.2 NA chr2 237428920 237434822 - 5903 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC112721.2 NA 0.553 10-20% NA NA CRC,HCC,Normal,PAAD CHD(down),PAAD(up) NA boxplot LINC00518 long intergenic non-protein coding RNA 518 chr6 10429255 10434874 - 5620 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00518 NA 0.012 50-60% Testis 4.025212392 Breast_cancer NA NA boxplot AC008171.1 NA chr2 205253304 205253503 - 200 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC008171.1 NA 0.012 40-50% NA NA Breast_cancer NA NA boxplot RP11-673C5.1 NA chr15 71164770 71165415 - 646 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-673C5.1 NA 0.929 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(up),PAAD(up) NA boxplot FABP5P12 fatty acid binding protein 5 pseudogene 12 chr4 159026139 159026527 + 389 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FABP5P12 NA 0.012 40-50% NA NA NA NA NA boxplot RP1-59D14.5 NA chr17 2375061 2379306 - 4246 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-59D14.5 NA 0.118 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AD000864.6 NA chr19 35901561 35903855 - 2295 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AD000864.6 NA 0.506 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-69E11.8 NA chr1 39565160 39573203 + 8044 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-69E11.8 NA 0.306 60-70% Testis 1.88194978 CRC,HCC,Normal,PAAD NA NA boxplot RP1-172B20.6 NA chr22 39750127 39751293 + 1167 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-172B20.6 NA 0.012 90-100% Testis 3.336045306 Normal NA NA boxplot RP11-927P21.5 NA chr17 64761912 64762710 - 799 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-927P21.5 NA 0.541 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RRN3P2 RRN3 homolog, RNA polymerase I transcription factor pseudogene 2 chr16 29074976 29116718 + 41743 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RRN3P2 NA 0.988 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down),HCC(down) NA boxplot RP11-429J17.5 NA chr8 143718246 143718891 - 646 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-429J17.5 NA 0.012 80-90% NA NA Breast_cancer NA NA boxplot NOC2LP2 NA chr2 131442644 131444587 - 1944 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NOC2LP2 NA 0.212 40-50% NA NA Breast_cancer,HCC,Normal NA NA boxplot LINC01614 long intergenic non-protein coding RNA 1614 chr2 215718043 215719424 + 1382 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01614 NA 0.059 10-20% NA NA CRC,HCC,Normal NA NA boxplot RP11-77H9.5 NA chr16 8853312 8854347 + 1036 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-77H9.5 NA 0.2 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-585F1.6 NA chr8 202660 202897 - 238 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-585F1.6 NA 0.024 40-50% NA NA HCC NA NA boxplot CTD-2020K17.3 NA chr17 45238028 45241734 - 3707 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2020K17.3 NA 0.812 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot GVINP1 GTPase, very large interferon inducible pseudogene 1 chr11 6713536 6746439 - 32904 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GVINP1 NA 1 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down),HCC(down) NA boxplot RP11-268G12.1 NA chrX 27174920 27398997 - 224078 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-268G12.1 NA 0.012 90-100% Testis 3.044471755 NA NA NA boxplot RP11-1079K10.1 NA chr17 49400429 49400800 - 372 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1079K10.1 NA 0.024 70-80% NA NA Normal NA NA boxplot CTC-575C13.4 NA chr19 20389658 20390689 + 1032 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-575C13.4 NA 0.024 50-60% NA NA CRC,HCC,Normal NA NA boxplot RP11-113K21.3 NA chr11 83106580 83106961 - 382 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-113K21.3 exo_circ_011738 0.024 10-20% NA NA Breast_cancer,CRC,PAAD NA NA boxplot LINC01579 long intergenic non-protein coding RNA 1579 chr15 93718542 94070820 - 352279 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01579 NA 0.012 80-90% NA NA Breast_cancer,CRC NA NA boxplot RP4-630A11.3 NA chr1 65486406 65494188 + 7783 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-630A11.3 exo_circ_043306,exo_circ_014892 0.318 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP5-903G2.2 NA chr11 67934563 67955802 - 21240 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-903G2.2 NA 0.071 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-297P16.4 NA chr4 103550927 103559127 - 8201 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-297P16.4 NA 0.071 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD HCC(up) NA boxplot RP11-109P14.10 NA chr1 37860697 37861580 + 884 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-109P14.10 NA 0.129 60-70% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot CTAGE12P CTAGE family member 12, pseudogene chr9 27608382 27610745 - 2364 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTAGE12P NA 0.024 90-100% NA NA Breast_cancer,Normal,PAAD NA NA boxplot RPL23AP32 ribosomal protein L23a pseudogene 32 chr2 54529343 54529801 + 459 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL23AP32 exo_circ_038367 0.035 30-40% NA NA Normal,PAAD NA NA boxplot RP11-87H9.4 NA chr9 41012231 41014133 + 1903 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-87H9.4 NA 0.812 10-20% NA NA CRC,HCC,Normal,PAAD CHD(down),HCC(down) NA boxplot CTD-2647E9.3 NA chr15 49879604 49883525 + 3922 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2647E9.3 NA 0.024 90-100% Testis 2.562438266 Normal,PAAD NA NA boxplot RP11-215P8.2 NA chr5 134394360 134395008 - 649 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-215P8.2 NA 0.047 20-30% NA NA CRC,Normal,PAAD NA NA boxplot CTD-3162L10.1 NA chr19 36304580 36312668 + 8089 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-3162L10.1 NA 0.094 40-50% Testis 1.604364058 Breast_cancer,HCC,Normal,PAAD NA NA boxplot RP11-156K13.3 NA chr8 17905756 17907887 + 2132 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-156K13.3 NA 0.106 70-80% Testis 2.406274841 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-677M14.3 NA chr11 124759129 124765936 + 6808 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-677M14.3 NA 0.729 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),HCC(down),PAAD(down) NA boxplot RP11-240M16.1 NA chr6 137945366 137972522 + 27157 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-240M16.1 NA 0.012 60-70% Testis 4.906892038 Breast_cancer,CRC NA NA boxplot RP11-671J11.7 NA chr14 34541740 34546329 - 4590 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-671J11.7 exo_circ_011754 0.059 90-100% NA NA Breast_cancer,CRC,HCC,PAAD NA NA boxplot LANCL1-AS1 LANCL1 antisense RNA 1 chr2 210324759 210469246 + 144488 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LANCL1-AS1 NA 0.024 30-40% NA NA Breast_cancer,CRC,Normal NA NA boxplot LINC00163 long intergenic non-protein coding RNA 163 chr21 44989864 44994086 - 4223 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00163 NA 0.012 90-100% NA NA Breast_cancer NA NA boxplot RP11-445P17.5 NA chr10 5304431 5304865 - 435 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-445P17.5 NA 0.012 70-80% Testis 4.906892038 HCC NA NA boxplot ALOX12P2 arachidonate 12-lipoxygenase pseudogene 2 chr17 6853861 6954107 + 100247 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ALOX12P2 exo_circ_017259 0.176 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-497H16.8 NA chr5 70495100 70500903 - 5804 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-497H16.8 NA 0.576 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-88E10.4 NA chr13 112602828 112606417 - 3590 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-88E10.4 NA 0.259 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP4-796I17.5 NA chr22 43957027 43957348 + 322 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-796I17.5 NA 0.024 60-70% NA NA CRC,PAAD NA NA boxplot AC022819.3 NA chr15 99157231 99161140 - 3910 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC022819.3 NA 0.024 30-40% NA NA Breast_cancer,PAAD NA NA boxplot CTD-2576N18.1 NA chr18 25200976 25202837 - 1862 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2576N18.1 NA 0.024 20-30% NA NA PAAD NA NA boxplot OR2L9P olfactory receptor family 2 subfamily L member 9 pseudogene chr1 247974741 247975653 + 913 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=OR2L9P NA 0.012 50-60% Testis 4.906892038 Breast_cancer,PAAD NA NA boxplot RP13-977J11.2 NA chr12 132186735 132189695 - 2961 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP13-977J11.2 NA 0.812 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-429E11.3 NA chr20 61717506 61719748 - 2243 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-429E11.3 NA 0.212 50-60% Spleen 2.518974905 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AADACP1 arylacetamide deacetylase pseudogene 1 chr3 151770428 151784894 + 14467 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AADACP1 NA 0.153 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-43D4.2 NA chr12 104514029 104514439 + 411 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-43D4.2 NA 0.094 50-60% NA NA Breast_cancer,CRC,Normal NA NA boxplot CTD-3023L14.1 NA chr8 8559894 8562124 + 2231 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-3023L14.1 NA 0.012 70-80% Testis 4.906892038 PAAD NA NA boxplot RP11-1260E13.3 NA chr17 354737 356882 + 2146 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1260E13.3 NA 0.012 0-10% NA NA Breast_cancer,Normal NA NA boxplot ENPP7P6 NA chr8 12448013 12511278 - 63266 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ENPP7P6 NA 0.471 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot GUSBP3 glucuronidase, beta pseudogene 3 chr5 69639459 69679259 - 39801 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GUSBP3 NA 0.541 20-30% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-417L19.6 NA chr12 131934642 131934928 + 287 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-417L19.6 NA 0.141 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP1-41C23.1 NA chr17 31583162 31637543 + 54382 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-41C23.1 NA 0.012 80-90% NA NA NA NA NA boxplot LL0XNC01-221F2.2 NA chrX 103087198 103089277 + 2080 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LL0XNC01-221F2.2 NA 0.012 80-90% Testis 1.658363026 Breast_cancer,Normal NA NA boxplot NIFKP8 nucleolar protein interacting with the FHA domain of MKI67 pseudogene 8 chr15 85181210 85182083 - 874 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NIFKP8 NA 0.012 10-20% NA NA Breast_cancer,HCC NA NA boxplot AC002056.3 NA chr22 50754675 50755434 - 760 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC002056.3 NA 0.906 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),HCC(up),PAAD(up) NA boxplot NCF1C neutrophil cytosolic factor 1C pseudogene chr7 75156639 75172044 - 15406 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NCF1C NA 1 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-77K12.8 NA chr16 75541399 75608445 - 67047 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-77K12.8 NA 0.165 90-100% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-46C24.6 NA chr16 89226807 89228692 - 1886 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-46C24.6 NA 0.141 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-549J18.1 NA chr5 93860669 93863825 - 3157 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-549J18.1 NA 0.294 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot LINC01543 long intergenic non-protein coding RNA 1543 chr18 26422995 26426101 + 3107 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01543 NA 0.035 10-20% NA NA CHD,PAAD NA NA boxplot RP11-538I12.2 NA chr16 77201474 77249957 - 48484 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-538I12.2 NA 0.282 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot RP3-406A7.3 NA chr6 136364129 136365079 + 951 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-406A7.3 NA 0.012 90-100% Testis 4.629371588 Breast_cancer,CRC,Normal NA NA boxplot RP11-482H16.1 NA chr2 56147630 56386171 + 238542 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-482H16.1 NA 0.647 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CTD-2650P22.2 NA chr15 52017167 52018032 - 866 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2650P22.2 NA 0.188 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CTB-134F13.1 NA chr16 58116885 58119353 + 2469 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTB-134F13.1 NA 0.035 80-90% NA NA HCC,PAAD NA NA boxplot RP11-361D15.2 NA chr15 59688517 59689418 + 902 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-361D15.2 NA 0.624 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot LINC01159 long intergenic non-protein coding RNA 1159 chr2 104865497 104872595 - 7099 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01159 NA 0.012 70-80% NA NA Breast_cancer,HCC,Normal NA NA boxplot AP000962.1 NA chr21 16525919 16527019 + 1101 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AP000962.1 NA 0.012 20-30% NA NA NA NA NA boxplot ADAMTS7P3 ADAMTS7 pseudogene 3 chr15 77976042 77993057 + 17016 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ADAMTS7P3 NA 0.012 70-80% NA NA Breast_cancer,Normal NA NA boxplot RP11-1090M7.1 NA chr17 12760140 12790242 - 30103 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1090M7.1 NA 0.012 60-70% NA NA PAAD NA NA boxplot RP11-114F3.2 NA chr12 64338178 64338797 - 620 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-114F3.2 NA 0.753 20-30% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down) NA boxplot NUP50-AS1 NUP50 antisense RNA 1 (head to head) chr22 45133020 45163781 - 30762 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NUP50-AS1 exo_circ_034926 0.871 0-10% NA NA CHD,CRC,HCC,Normal,PAAD CHD(up) NA boxplot AC009299.3 NA chr2 161244739 161249050 + 4312 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC009299.3 NA 0.553 10-20% Thyroid 1.004295359 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC012512.1 NA chr2 223704621 223705338 + 718 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC012512.1 NA 0.012 80-90% Pituitary 1.782431568 HCC NA NA boxplot RP11-61N20.3 NA chr11 49433480 49434438 - 959 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-61N20.3 NA 0.729 20-30% Testis 1.214100589 CRC,HCC,Normal,PAAD CHD(down),CRC(down) NA boxplot CTD-3187F8.15 NA chr19 51137970 51138634 + 665 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-3187F8.15 NA 0.094 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC079779.6 NA chr2 317912 342118 + 24207 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC079779.6 NA 0.318 40-50% Testis 3.927880194 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot SKP1P1 S-phase kinase-associated protein 1 pseudogene 1 chr7 66423405 66423893 - 489 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SKP1P1 NA 0.988 0-10% NA NA CHD,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-535M15.2 NA chr9 96725890 96727469 + 1580 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-535M15.2 NA 0.082 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot VDAC1P8 voltage-dependent anion channel 1 pseudogene 8 chr6 143490424 143506406 + 15983 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=VDAC1P8 NA 0.588 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot FAM207BP family with sequence similarity 207, member B, pseudogene chr13 18697003 18697507 + 505 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FAM207BP NA 0.612 40-50% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot XXyac-YX65C7_A.3 NA chr6 169286534 169289216 - 2683 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=XXyac-YX65C7_A.3 NA 0.012 70-80% NA NA NA NA NA boxplot CTD-2013N17.6 NA chr19 16356329 16358327 - 1999 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2013N17.6 NA 0.165 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot MIR34A microRNA 34a chr1 9148011 9196983 - 48973 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MIR34A NA 0.188 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC007952.4 NA chr17 19164209 19174436 - 10228 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC007952.4 NA 0.047 40-50% NA NA HCC,Normal,PAAD NA NA boxplot RP11-648K4.2 NA chr15 87432058 87703852 - 271795 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-648K4.2 NA 0.024 60-70% Testis 4.269317772 Breast_cancer,HCC,Normal NA NA boxplot RP11-552M11.4 NA chr1 111438638 111441364 - 2727 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-552M11.4 NA 0.906 10-20% NA NA CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-809O17.1 NA chr8 141126044 141129961 - 3918 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-809O17.1 exo_circ_016501,exo_circ_055620,exo_circ_055619 0.812 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down) NA boxplot OR51AB1P olfactory receptor family 51 subfamily AB member 1 pseudogene chr11 5291761 5292380 - 620 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=OR51AB1P NA 0.035 70-80% NA NA CRC,HCC NA NA boxplot CH17-360D5.2 NA chr10 47908064 47991850 - 83787 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CH17-360D5.2 NA 0.188 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD PAAD(up) NA boxplot LUCAT1 lung cancer associated transcript 1 (non-protein coding) chr5 91303029 91314402 - 11374 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LUCAT1 NA 0.671 10-20% Whole Blood 1.633597539 Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up),HCC(down),PAAD(up) NA boxplot ATP5HP2 ATP synthase, H+ transporting, mitochondrial Fo complex subunit D pseudogene 2 chr9 2900320 2900804 - 485 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ATP5HP2 NA 0.012 0-10% NA NA PAAD NA NA boxplot AC093326.3 NA chr2 558204 578145 + 19942 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC093326.3 NA 0.012 20-30% Testis 2.95941109 Breast_cancer,Normal NA NA boxplot RP11-229P13.25 NA chr9 136937169 136937988 - 820 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-229P13.25 NA 0.035 30-40% NA NA Breast_cancer,HCC,Normal NA NA boxplot NCAPGP1 non-SMC condensin I complex subunit G pseudogene 1 chr8 120635558 120638204 - 2647 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NCAPGP1 NA 0.047 80-90% NA NA CRC,Normal,PAAD NA NA boxplot LINC00638 long intergenic non-protein coding RNA 638 chr14 104821201 104823718 + 2518 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00638 NA 0.188 40-50% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-718G2.5 NA chr14 70275296 70291859 + 16564 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-718G2.5 NA 0.435 10-20% Testis 4.209174448 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot MARK2P8 MAP/microtubule affinity-regulating kinase 2 pseudogene 8 chr3 128748538 128749489 - 952 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MARK2P8 NA 0.012 80-90% NA NA Breast_cancer NA NA boxplot RP11-71H17.8 NA chr3 124791119 124793104 - 1986 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-71H17.8 NA 0.035 30-40% NA NA Breast_cancer,CRC,Normal NA NA boxplot COL18A1-AS1 COL18A1 antisense RNA 1 chr21 45419716 45425070 - 5355 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=COL18A1-AS1 NA 0.035 30-40% NA NA Breast_cancer,Normal,PAAD NA NA boxplot RP11-188P20.3 NA chr3 43346923 43347643 - 721 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-188P20.3 NA 0.341 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot C7orf69 chromosome 7 open reading frame 69 chr7 47795291 47819847 + 24557 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=C7orf69 NA 0.012 90-100% Testis 4.095181863 Breast_cancer NA NA boxplot RP11-386I14.4 NA chr1 78004346 78004554 - 209 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-386I14.4 NA 0.094 60-70% NA NA CRC,Normal,PAAD NA NA boxplot RP11-313J2.1 NA chr10 42331866 42367974 - 36109 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-313J2.1 NA 0.553 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),PAAD(down) NA boxplot LINC01004 long intergenic non-protein coding RNA 1004 chr7 104950315 105013044 - 62730 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01004 NA 0.259 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-371A22.1 NA chr7 133034607 133035920 - 1314 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-371A22.1 exo_circ_039127 0.929 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down) NA boxplot CTD-2001E22.1 NA chr5 9621377 9658458 - 37082 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2001E22.1 NA 0.012 90-100% Testis 4.906892038 PAAD NA NA boxplot AC009948.5 NA chr2 178413939 178440243 + 26305 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC009948.5 NA 0.8 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot AC051649.12 NA chr11 1864177 1866667 + 2491 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC051649.12 NA 0.024 70-80% Adrenal Gland 2.716021667 Breast_cancer,CRC,HCC NA NA boxplot RP11-15H20.7 NA chr19 23257255 23274232 - 16978 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-15H20.7 NA 0.365 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC104389.28 NA chr11 5304976 5505652 - 200677 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC104389.28 NA 0.094 20-30% Testis 1.069196998 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot TTTY2B testis-specific transcript, Y-linked 2B (non-protein coding) chrY 6406244 6424145 - 17902 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TTTY2B NA 0.012 70-80% NA NA CRC,HCC,Normal NA NA boxplot RP11-394B2.3 NA chr16 70768967 70770221 - 1255 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-394B2.3 NA 0.012 60-70% NA NA CRC,Normal NA NA boxplot RP11-58K22.1 NA chr11 44468464 44470429 + 1966 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-58K22.1 NA 0.024 60-70% NA NA Breast_cancer,CRC,Normal,PAAD NA NA boxplot USP17L16P ubiquitin specific peptidase 17-like family member 16, pseudogene chr4 9239130 9240722 + 1593 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=USP17L16P NA 0.012 80-90% NA NA CHD NA NA boxplot LIMD1-AS1 LIMD1 antisense RNA 1 chr3 45679043 45689134 - 10092 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LIMD1-AS1 NA 0.588 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot RP1-232P20.1 NA chr6 5451683 5458075 - 6393 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-232P20.1 NA 0.106 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot DSTNP1 destrin (actin depolymerizing factor) pseudogene 1 chr21 46653558 46654022 - 465 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DSTNP1 NA 0.165 70-80% NA NA CRC,HCC,Normal NA NA boxplot PMS2P10 PMS1 homolog 2, mismatch repair system component pseudogene 10 chr7 75288120 75299795 - 11676 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PMS2P10 NA 0.988 0-10% NA NA CHD,CRC,HCC,Normal,PAAD CRC(up),HCC(up),PAAD(up) NA boxplot LINC00574 long intergenic non-protein coding RNA 574 chr6 169790321 169802873 + 12553 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00574 NA 0.035 70-80% NA NA Breast_cancer,PAAD NA NA boxplot RP11-122C5.3 NA chr5 38783580 38792754 + 9175 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-122C5.3 NA 0.012 80-90% NA NA Normal NA NA boxplot RP11-21A7A.3 NA chr11 64118272 64119210 - 939 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-21A7A.3 NA 0.047 40-50% NA NA CRC,HCC,PAAD NA NA boxplot RP11-25K19.1 NA chr8 59119040 59121346 + 2307 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-25K19.1 NA 0.847 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot AC005593.2 NA chr5 131797415 131797929 + 515 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC005593.2 NA 0.106 30-40% NA NA CRC,Normal,PAAD NA NA boxplot NUP210P3 nucleoporin 210kDa pseudogene 3 chr3 129323046 129325426 - 2381 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NUP210P3 NA 0.012 70-80% NA NA Normal NA NA boxplot CTD-2117L12.3 NA chr5 58503295 58503700 + 406 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2117L12.3 NA 0.059 30-40% Spleen 4.906892038 CRC,Normal NA NA boxplot YWHABP1 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta pseudogene 1 chr9 38643042 38643768 + 727 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=YWHABP1 NA 0.024 60-70% NA NA CRC,Normal NA NA boxplot RP11-820K3.4 NA chr12 31477506 31477987 + 482 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-820K3.4 NA 0.012 40-50% Ovary 4.245383393 HCC,PAAD NA NA boxplot HNRNPKP4 heterogeneous nuclear ribonucleoprotein K pseudogene 4 chr3 96349554 96350939 + 1386 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HNRNPKP4 NA 1 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot AC087163.2 NA chr17 18010643 18011822 + 1180 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC087163.2 NA 0.047 40-50% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot GAPDHP27 glyceraldehyde 3 phosphate dehydrogenase pseudogene 27 chr1 119558755 119559774 - 1020 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GAPDHP27 NA 0.012 80-90% NA NA NA NA NA boxplot RP11-304M2.5 NA chr11 203623 205470 + 1848 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-304M2.5 NA 0.541 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-626E13.1 NA chr4 185665885 185675417 + 9533 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-626E13.1 NA 0.012 20-30% NA NA Breast_cancer,PAAD NA NA boxplot CTD-2623N2.5 NA chr19 9793621 9802301 + 8681 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2623N2.5 NA 0.012 80-90% Testis 4.145249917 Normal NA NA boxplot RP11-31F15.2 NA chr1 113011687 113073105 - 61419 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-31F15.2 NA 0.047 50-60% NA NA Breast_cancer,Normal NA NA boxplot AC007391.2 NA chr2 37325340 37326797 + 1458 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC007391.2 NA 0.012 90-100% Testis 2.862914117 Breast_cancer,CRC NA NA boxplot AE000662.92 NA chr14 22556640 22559037 + 2398 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AE000662.92 NA 0.012 10-20% Testis 4.906892038 Breast_cancer,Normal NA NA boxplot BACH1-IT1 NA chr21 29351634 29361894 + 10261 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=BACH1-IT1 NA 0.635 10-20% Testis 1.084440274 Breast_cancer,CRC,HCC,Normal,PAAD CRC(up),PAAD(up) NA boxplot GAPDHP1 glyceraldehyde-3-phosphate dehydrogenase pseudogene 1 chrX 39787132 39788136 - 1005 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GAPDHP1 NA 0.929 0-10% NA NA CHD,CRC,HCC,Normal,PAAD CHD(up) NA boxplot RP11-528N21.1 NA chr3 40603125 40605427 - 2303 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-528N21.1 NA 0.024 70-80% Testis 2.126795824 Normal NA NA boxplot SETP1 SET pseudogene 1 chr14 20528115 20528959 - 845 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SETP1 NA 0.012 60-70% NA NA Normal NA NA boxplot LINC01208 long intergenic non-protein coding RNA 1208 chr3 176604143 176635532 - 31390 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01208 exo_circ_048993 0.047 80-90% NA NA HCC,Normal NA NA boxplot RP11-307L3.2 NA chr9 6278667 6279153 + 487 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-307L3.2 NA 0.788 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RPL32P3 ribosomal protein L32 pseudogene 3 chr3 129382922 129399655 - 16734 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL32P3 NA 0.8 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down),HCC(down),PAAD(up) NA boxplot DLG1-AS1 DLG1 antisense RNA 1 chr3 197298252 197303747 + 5496 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DLG1-AS1 NA 0.024 60-70% Testis 3.430055887 Breast_cancer,HCC NA NA boxplot RP11-460I19.2 NA chr4 1027678 1028972 + 1295 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-460I19.2 NA 0.012 70-80% Thyroid 4.906892038 Breast_cancer NA NA boxplot RP11-152K4.2 NA chr5 31093977 31267610 - 173634 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-152K4.2 NA 0.541 10-20% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down) NA boxplot C9orf106 chromosome 9 open reading frame 106 chr9 129321016 129324905 + 3890 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=C9orf106 NA 0.071 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CTA-833B7.2 NA chr22 36847372 36870441 - 23070 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTA-833B7.2 NA 0.247 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-118B18.3 NA chr17 68691809 68716064 - 24256 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-118B18.3 NA 0.012 60-70% NA NA Breast_cancer NA NA boxplot HOXA-AS3 HOXA cluster antisense RNA 3 chr7 27129977 27155928 + 25952 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HOXA-AS3 NA 0.176 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-118M9.3 NA chr5 146099406 146120412 + 21007 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-118M9.3 NA 0.035 70-80% NA NA CRC,HCC NA NA boxplot CTD-2278I10.4 NA chr19 17296196 17296695 - 500 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2278I10.4 NA 0.024 90-100% NA NA CRC NA NA boxplot RP11-354K1.1 NA chr1 211639695 211654581 + 14887 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-354K1.1 NA 0.024 20-30% Brain 4.906892038 Breast_cancer,PAAD NA NA boxplot AC002401.1 NA chr17 50135586 50146176 + 10591 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC002401.1 NA 0.482 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-434D11.4 NA chr5 126751963 126776486 - 24524 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-434D11.4 NA 0.035 70-80% Testis 4.767088549 Breast_cancer,CRC,Normal NA NA boxplot VN1R84P vomeronasal 1 receptor 84 pseudogene chr19 21719801 21720035 - 235 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=VN1R84P NA 0.059 40-50% NA NA CRC,HCC NA NA boxplot PI4KAP2 phosphatidylinositol 4-kinase, catalytic, alpha pseudogene 2 chr22 21473000 21517533 - 44534 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PI4KAP2 NA 0.976 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up),CRC(up),HCC(up),PAAD(up) NA boxplot AC005822.1 NA chr17 16616848 16617881 - 1034 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC005822.1 NA 0.835 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot DGCR9 DiGeorge syndrome critical region gene 9 (non-protein coding) chr22 19017834 19020248 + 2415 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DGCR9 NA 0.024 60-70% NA NA Breast_cancer,PAAD NA NA boxplot RP11-168O16.1 NA chr1 201023949 201028792 + 4844 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-168O16.1 NA 0.047 10-20% Testis 3.815033348 Breast_cancer,Normal,PAAD NA NA boxplot CTC-137K3.1 NA chr8 132826179 132826903 + 725 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-137K3.1 NA 0.047 70-80% NA NA Normal NA NA boxplot HSPE1P28 heat shock protein family E (Hsp10) member 1 pseudogene 28 chr9 112280978 112281335 - 358 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HSPE1P28 exo_circ_015232 0.047 60-70% NA NA CRC,HCC,Normal NA NA boxplot RP1-200K18.1 NA chr6 152794496 152831913 - 37418 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-200K18.1 exo_circ_010280 0.012 0-10% Testis 4.67994131 HCC NA NA boxplot RP11-304L19.8 NA chr16 2211997 2212863 + 867 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-304L19.8 NA 0.118 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CCNYL2 cyclin Y-like 2 (pseudogene) chr10 42408168 42475349 - 67182 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CCNYL2 NA 0.047 30-40% Testis 3.495734991 Breast_cancer,HCC,PAAD NA NA boxplot RP11-555M1.3 NA chr3 157163452 157169133 + 5682 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-555M1.3 exo_circ_054158 0.059 80-90% Liver 1.193566129 CRC,HCC,Normal,PAAD NA NA boxplot GUSBP6 glucuronidase, beta pseudogene 6 chr7 64100305 64150721 + 50417 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GUSBP6 NA 0.012 70-80% Testis 3.374852945 Breast_cancer,HCC NA NA boxplot RP11-429B14.1 NA chr15 89518523 89591956 + 73434 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-429B14.1 NA 0.012 50-60% NA NA NA NA NA boxplot RPL7P22 ribosomal protein L7 pseudogene 22 chr5 72725419 72726151 + 733 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL7P22 NA 0.753 10-20% NA NA CHD,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot SNRPEP9 small nuclear ribonucleoprotein polypeptide E pseudogene 9 chrX 24513450 24513687 + 238 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SNRPEP9 NA 0.024 50-60% Artery 4.906892038 CRC,Normal NA NA boxplot BCLAF1P2 BCL2-associated transcription factor 1 pseudogene 2 chr16 34266041 34268649 - 2609 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=BCLAF1P2 NA 0.929 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(down),PAAD(down) NA boxplot RP11-305L7.3 NA chr9 91119138 91163087 - 43950 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-305L7.3 NA 0.424 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot AC092171.4 NA chr7 5475804 5479811 + 4008 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC092171.4 NA 0.235 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot ENSAP2 endosulfine alpha pseudogene 2 chr14 82692704 82693055 - 352 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ENSAP2 NA 1 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up) NA boxplot RP11-30J20.1 NA chr8 136530798 136984935 + 454138 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-30J20.1 NA 0.047 10-20% Testis 3.41035655 Breast_cancer,HCC,Normal,PAAD NA NA boxplot CTD-2207P18.1 NA chr14 74552181 74560048 + 7868 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2207P18.1 NA 0.024 80-90% NA NA Breast_cancer,CRC,Normal NA NA boxplot LINC00677 long intergenic non-protein coding RNA 677 chr14 103120847 103123007 - 2161 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00677 NA 0.012 10-20% Testis 2.601418831 HCC NA NA boxplot RP11-885B4.2 NA chr12 2761200 2775658 - 14459 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-885B4.2 NA 0.118 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-608O21.1 NA chr4 19455436 19909692 + 454257 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-608O21.1 NA 0.024 80-90% Testis 3.29610965 Normal,PAAD NA NA boxplot FIRRE firre intergenic repeating RNA element chrX 131691530 131830643 - 139114 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FIRRE NA 0.988 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD PAAD(up) NA boxplot AC006126.3 NA chr19 45187388 45216933 + 29546 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC006126.3 NA 0.129 50-60% NA NA HCC,Normal,PAAD NA NA boxplot LINC00997 long intergenic non-protein coding RNA 997 chr7 32760279 32762924 + 2646 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00997 NA 0.376 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up) NA boxplot RP11-57H12.2 NA chr1 95120147 95138554 + 18408 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-57H12.2 NA 0.224 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot GPAA1P1 glycosylphosphatidylinositol anchor attachment 1 pseudogene 1 chr2 109984058 109984988 + 931 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GPAA1P1 NA 0.012 70-80% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-69M1.4 NA chr12 8017201 8017860 - 660 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-69M1.4 NA 0.012 10-20% NA NA Normal NA NA boxplot IPO5P1 importin 5 pseudogene 1 chr19 23255053 23257939 - 2887 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=IPO5P1 NA 0.6 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-589C21.6 NA chr8 42139461 42139752 - 292 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-589C21.6 NA 0.188 40-50% Testis 1.908399634 CRC,HCC,Normal,PAAD NA NA boxplot AC006042.7 NA chr7 7958183 7969903 - 11721 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC006042.7 NA 0.247 40-50% Testis 2.488913846 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-493L12.6 NA chr12 47341614 47342089 - 476 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-493L12.6 NA 0.059 40-50% Testis 2.400536758 CRC,HCC,Normal,PAAD NA NA boxplot RP13-317D12.3 NA chr11 462930 463899 - 970 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP13-317D12.3 NA 0.047 90-100% NA NA Breast_cancer,Normal NA NA boxplot CTB-134H23.2 NA chr16 29038655 29052726 + 14072 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTB-134H23.2 NA 0.494 70-80% NA NA CRC,HCC,Normal,PAAD NA NA boxplot REXO1L11P REX1, RNA exonuclease 1 homolog-like 11, pseudogene chr8 85733419 85737278 + 3860 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=REXO1L11P NA 0.047 60-70% NA NA Breast_cancer,HCC,PAAD NA NA boxplot AC011513.4 NA chr19 41757898 41786893 - 28996 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC011513.4 NA 0.106 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-21L19.1 NA chr11 14262846 14273691 - 10846 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-21L19.1 NA 0.024 90-100% NA NA Breast_cancer,CRC,HCC,PAAD NA NA boxplot RP11-907D1.1 NA chr14 97110416 97119247 - 8832 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-907D1.1 NA 0.012 0-10% Brain 4.081159279 Breast_cancer,PAAD NA NA boxplot CTD-3149D2.4 NA chr19 17727840 17734513 - 6674 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-3149D2.4 NA 0.129 80-90% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-798G7.4 NA chr17 45553710 45559070 - 5361 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-798G7.4 NA 0.118 70-80% NA NA CRC,PAAD NA NA boxplot RP13-1056D16.2 NA chr3 49775285 49775614 + 330 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP13-1056D16.2 NA 0.024 10-20% Testis 4.906892038 Normal,PAAD NA NA boxplot CTD-2215E18.2 NA chr5 97188090 97201880 - 13791 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2215E18.2 NA 0.024 20-30% NA NA Normal NA NA boxplot RP11-797M17.1 NA chr12 107093298 107123314 + 30017 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-797M17.1 NA 0.024 80-90% Testis 4.906892038 Breast_cancer,Normal NA NA boxplot AC024937.4 NA chr3 195996738 195998233 + 1496 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC024937.4 NA 0.024 90-100% NA NA HCC NA NA boxplot RP11-66B24.4 NA chr15 100892859 100919283 - 26425 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-66B24.4 NA 0.541 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot RP11-76E12.1 NA chr14 97632647 97686658 - 54012 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-76E12.1 NA 0.012 10-20% Testis 4.906892038 Breast_cancer,PAAD NA NA boxplot CTD-2026K11.4 NA chr15 75639760 75640976 + 1217 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2026K11.4 NA 0.388 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot CTD-2012K14.7 NA chr16 67561411 67562309 - 899 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2012K14.7 NA 0.176 40-50% NA NA CRC,HCC,Normal NA NA boxplot CMB9-55F22.1 NA chr11 779617 780755 + 1139 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CMB9-55F22.1 NA 0.212 50-60% NA NA Breast_cancer,CRC,Normal,PAAD NA NA boxplot CTD-2349P21.12 NA chr17 30803654 30804077 + 424 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2349P21.12 NA 0.435 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-499P20.2 NA chr10 18513115 18545651 - 32537 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-499P20.2 exo_circ_050587,exo_circ_056085 0.4 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot SNRPCP19 small nuclear ribonucleoprotein polypeptide C pseudogene 19 chr7 24906135 24906594 - 460 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SNRPCP19 NA 0.024 50-60% NA NA Breast_cancer,PAAD NA NA boxplot ANKRD44-IT1 ANKRD44 intronic transcript 1 chr2 197250858 197302519 - 51662 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ANKRD44-IT1 NA 0.329 10-20% Testis 1.619885587 CRC,HCC,Normal,PAAD CRC(up) NA boxplot TPT1P5 tumor protein, translationally-controlled 1 pseudogene 5 chr5 31908361 31909186 + 826 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TPT1P5 NA 0.047 30-40% NA NA Normal,PAAD NA NA boxplot RP4-675C20.4 NA chr1 117493515 117495006 + 1492 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-675C20.4 NA 0.071 70-80% NA NA CRC,HCC,Normal NA NA boxplot RP1-223E5.4 NA chr6 13614111 13615155 - 1045 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-223E5.4 exo_circ_033401 0.106 70-80% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP4-803A2.1 NA chr1 32979947 32980472 + 526 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-803A2.1 NA 0.024 30-40% NA NA Breast_cancer,HCC,Normal NA NA boxplot CTD-2541J13.1 NA chr18 67481791 67484966 - 3176 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2541J13.1 NA 0.024 0-10% NA NA PAAD NA NA boxplot HM13-IT1 HM13 intronic transcript 1 chr20 31563166 31564076 + 911 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HM13-IT1 NA 0.094 40-50% NA NA CRC,Normal,PAAD NA NA boxplot RP11-359D24.1 NA chr3 81840547 81922861 + 82315 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-359D24.1 NA 0.047 30-40% Testis 4.906892038 HCC,Normal NA NA boxplot AC138035.3 NA chr5 181329049 181331839 - 2791 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC138035.3 NA 0.012 50-60% NA NA Breast_cancer,HCC NA NA boxplot RP11-544A12.4 NA chr9 131132852 131167505 - 34654 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-544A12.4 NA 0.176 10-20% Testis 3.838392691 Breast_cancer,CRC,HCC,Normal NA NA boxplot TPTE2P2 transmembrane phosphoinositide 3-phosphatase and tensin homolog 2 pseudogene 2 chr13 52219344 52334277 - 114934 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TPTE2P2 NA 0.047 80-90% Testis 3.900203904 CRC,HCC,Normal,PAAD NA NA boxplot RP11-293M10.6 NA chr14 75423683 75427741 - 4059 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-293M10.6 NA 0.612 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),HCC(down),PAAD(down) NA boxplot AC005546.2 NA chr19 13131571 13132410 + 840 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC005546.2 NA 0.035 70-80% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot CTC-366B18.4 NA chr5 75608817 75609983 + 1167 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-366B18.4 NA 0.129 60-70% NA NA CRC,HCC,Normal NA NA boxplot HIGD1AP12 HIG1 hypoxia inducible domain family member 1A pseudogene 12 chr1 111380291 111380571 + 281 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HIGD1AP12 NA 0.012 40-50% Testis 4.906892038 PAAD NA NA boxplot RP11-15A1.4 NA chr19 43891233 43895411 + 4179 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-15A1.4 NA 0.047 30-40% NA NA CRC,Normal NA NA boxplot RP11-1046B16.3 NA chr14 69617122 69617648 + 527 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1046B16.3 NA 0.129 70-80% NA NA CRC,HCC,Normal NA NA boxplot OR4A46P olfactory receptor family 4 subfamily A member 46 pseudogene chr11 48496348 48497280 + 933 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=OR4A46P NA 0.012 10-20% NA NA HCC NA NA boxplot AC006145.4 NA chr7 82009177 82029955 + 20779 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC006145.4 NA 0.012 60-70% NA NA HCC,Normal,PAAD NA NA boxplot RP11-139H15.6 NA chr15 55346347 55346752 - 406 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-139H15.6 NA 0.106 70-80% NA NA CRC,HCC,Normal NA NA boxplot RP11-676B18.1 NA chr13 37142967 37146718 - 3752 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-676B18.1 NA 0.012 50-60% NA NA Breast_cancer NA NA boxplot RP11-665C16.5 NA chr14 55325834 55339501 - 13668 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-665C16.5 NA 0.012 50-60% NA NA CRC NA NA boxplot LINC01305 long intergenic non-protein coding RNA 1305 chr2 174326027 174330643 + 4617 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01305 NA 0.012 60-70% NA NA Breast_cancer,CRC NA NA boxplot HMGN1P15 high mobility group nucleosome binding domain 1 pseudogene 15 chr5 115289036 115289330 - 295 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HMGN1P15 NA 0.024 20-30% NA NA CRC NA NA boxplot RSL24D1P8 ribosomal L24 domain containing 1 pseudogene 8 chr19 12096424 12096915 + 492 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RSL24D1P8 exo_circ_052097 0.012 80-90% NA NA CRC NA NA boxplot RP11-445N18.5 NA chr10 45164228 45181427 - 17200 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-445N18.5 NA 0.294 30-40% Testis 2.71239811 CRC,HCC,Normal,PAAD NA NA boxplot RP11-563N4.1 NA chr2 32165046 32165757 - 712 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-563N4.1 NA 0.082 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-90E9.1 NA chr12 98794485 98794964 + 480 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-90E9.1 NA 0.094 60-70% NA NA HCC,Normal,PAAD NA NA boxplot HRAT92 heart tissue-associated transcript 92 chr7 520391 525232 + 4842 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HRAT92 NA 0.918 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot IGBP1P4 immunoglobulin (CD79A) binding protein 1 pseudogene 4 chr4 82401578 82402456 - 879 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=IGBP1P4 NA 0.035 90-100% Testis 2.846451757 CRC,Normal NA NA boxplot CTD-2199O4.3 NA chr5 10195121 10197628 - 2508 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2199O4.3 NA 0.035 20-30% NA NA CRC,Normal,PAAD NA NA boxplot RP11-676J12.8 NA chr17 789744 790525 - 782 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-676J12.8 NA 0.024 30-40% NA NA CRC NA NA boxplot NPM1P29 nucleophosmin 1 (nucleolar phosphoprotein B23, numatrin) pseudogene 29 chr3 149938997 149939799 - 803 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NPM1P29 NA 0.071 30-40% NA NA CRC,Normal NA NA boxplot RP1-13D10.2 NA chr6 16160926 16161411 + 486 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-13D10.2 NA 0.059 70-80% NA NA Breast_cancer,CRC,Normal NA NA boxplot RP11-264B14.1 NA chr17 61034636 61070122 - 35487 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-264B14.1 NA 0.071 90-100% Lung 1.579201025 Normal NA NA boxplot CH507-513H4.5 NA chr21 8254592 8255514 - 923 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CH507-513H4.5 NA 0.765 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(up) NA boxplot RP11-31K23.1 NA chr8 95947781 95948233 - 453 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-31K23.1 NA 0.024 70-80% Testis 4.906892038 Breast_cancer,CRC,Normal NA NA boxplot PLCG1-AS1 PLCG1 antisense RNA 1 chr20 41098329 41138003 - 39675 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PLCG1-AS1 NA 0.576 30-40% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP4-583P15.16 NA chr20 63730072 63730377 - 306 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-583P15.16 NA 0.153 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot MYHAS myosin heavy chain gene cluster antisense RNA chr17 10383144 10623886 + 240743 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MYHAS NA 0.012 90-100% NA NA Breast_cancer,HCC NA NA boxplot RP4-601P9.2 NA chr12 114713811 114767957 + 54147 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-601P9.2 NA 0.024 0-10% NA NA Breast_cancer,CRC,Normal NA NA boxplot RP5-943J3.1 NA chr1 89788914 89790492 + 1579 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-943J3.1 NA 0.047 40-50% NA NA Breast_cancer,CRC,Normal NA NA boxplot HMGB1P10 high mobility group box 1 pseudogene 10 chr22 26560526 26561088 + 563 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HMGB1P10 NA 1 0-10% NA NA CHD,CRC,HCC,Normal,PAAD CHD(up),CRC(up),HCC(up),PAAD(up) NA boxplot RP11-296E23.2 NA chr18 21316878 21317795 + 918 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-296E23.2 NA 0.012 10-20% NA NA PAAD NA NA boxplot RP11-562I5.2 NA chr2 231497090 231507256 - 10167 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-562I5.2 exo_circ_013816,exo_circ_020676,exo_circ_006813 0.471 10-20% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(down),PAAD(down) NA boxplot RP11-12O16.1 NA chr15 33105758 33106236 - 479 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-12O16.1 NA 0.012 80-90% NA NA CRC NA NA boxplot NUTF2P8 nuclear transport factor 2 pseudogene 8 chr2 21362292 21364025 - 1734 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NUTF2P8 NA 0.012 50-60% NA NA Normal NA NA boxplot TECRP1 trans-2,3-enoyl-CoA reductase pseudogene 1 chr4 86949669 86950113 - 445 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TECRP1 NA 1 0-10% NA NA CHD,CRC,HCC,Normal,PAAD CHD(up),HCC(up) NA boxplot RP11-477G18.2 NA chr4 112171215 112171527 + 313 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-477G18.2 NA 0.071 60-70% NA NA CRC,Normal,PAAD NA NA boxplot CTD-2054N24.1 NA chr15 99791127 99792847 + 1721 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2054N24.1 NA 0.035 50-60% NA NA Breast_cancer,CRC,HCC NA NA boxplot STXBP5-AS1 STXBP5 antisense RNA 1 chr6 146841901 147204614 - 362714 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=STXBP5-AS1 exo_circ_010271,exo_circ_025312,exo_circ_055131 0.929 0-10% NA NA CHD,CRC,HCC,Normal,PAAD CHD(down) NA boxplot LINC01629 long intergenic non-protein coding RNA 1629 chr14 76959638 76965802 + 6165 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01629 NA 0.024 20-30% NA NA Breast_cancer,PAAD NA NA boxplot CTD-2296D1.5 NA chr5 7373117 7379790 + 6674 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2296D1.5 NA 0.012 90-100% Testis 4.906892038 CRC NA NA boxplot CTD-2303H24.2 NA chr17 18511221 18551705 - 40485 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2303H24.2 NA 0.682 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-15I11.2 NA chr1 212168207 212190259 + 22053 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-15I11.2 NA 0.012 60-70% Spleen 4.240010592 Breast_cancer,Normal NA NA boxplot RP11-752G15.10 NA chr15 82738386 82739122 + 737 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-752G15.10 NA 0.012 90-100% NA NA Normal NA NA boxplot YBX1P8 Y-box binding protein 1 pseudogene 8 chrX 46684765 46685707 - 943 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=YBX1P8 NA 0.106 50-60% Pituitary 4.906892038 Breast_cancer,CRC,Normal,PAAD NA NA boxplot PWAR5 Prader Willi/Angelman region RNA 5 chr15 24985053 24988232 + 3180 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PWAR5 NA 0.929 0-10% NA NA CHD,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot RP11-365F18.1 NA chr7 139227537 139227828 - 292 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-365F18.1 NA 0.012 40-50% Testis 2.599840856 HCC NA NA boxplot RP11-400N9.1 NA chr2 233351132 233353416 - 2285 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-400N9.1 NA 0.082 70-80% Prostate 1.604639936 Breast_cancer,CRC,Normal NA NA boxplot RP11-526I2.5 NA chr15 100547765 100550153 - 2389 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-526I2.5 NA 0.235 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-1094M14.5 NA chr17 35499690 35510270 - 10581 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1094M14.5 NA 0.576 10-20% NA NA CRC,HCC,Normal,PAAD NA NA boxplot KB-1458E12.1 NA chr8 98371355 98388247 - 16893 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KB-1458E12.1 NA 0.012 90-100% NA NA NA NA NA boxplot RP11-566K19.5 NA chr15 22770523 22776199 - 5677 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-566K19.5 NA 0.106 30-40% Testis 3.775265105 Breast_cancer,CRC,HCC,Normal NA NA boxplot RP11-130C6.1 NA chr4 128552590 128553416 - 827 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-130C6.1 NA 0.024 80-90% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-256I9.2 NA chr16 65190973 65234914 - 43942 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-256I9.2 NA 0.024 60-70% Vagina 4.495327843 HCC NA NA boxplot SNX18P12 sorting nexin 18 pseudogene 12 chr21 9364467 9365225 - 759 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SNX18P12 NA 0.024 30-40% NA NA Breast_cancer,CRC,Normal NA NA boxplot RP11-777J24.1 NA chr8 92144088 92144435 - 348 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-777J24.1 NA 0.012 90-100% NA NA Normal NA NA boxplot RP11-226L15.1 NA chr1 160020300 160020727 + 428 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-226L15.1 NA 0.012 40-50% NA NA Breast_cancer,Normal NA NA boxplot RP13-401N8.1 NA chr20 25751218 25752761 + 1544 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP13-401N8.1 NA 0.094 50-60% Testis 1.28816536 Breast_cancer,CRC,HCC,Normal NA NA boxplot RP11-723O4.3 NA chr3 128869624 128870026 + 403 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-723O4.3 NA 0.024 90-100% Testis 1.720788538 CRC NA NA boxplot FUT8-AS1 FUT8 antisense RNA 1 chr14 65411170 65412690 - 1521 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FUT8-AS1 NA 0.659 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD PAAD(up) NA boxplot RPS4XP2 ribosomal protein S4X pseudogene 2 chr20 4629427 4630219 - 793 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPS4XP2 NA 0.012 70-80% Testis 3.909180699 HCC,Normal NA NA boxplot VN1R42P vomeronasal 1 receptor 42 pseudogene chr7 64933273 64933616 + 344 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=VN1R42P NA 0.082 20-30% NA NA CHD,CRC,Normal NA NA boxplot SAMD11P1 sterile alpha motif domain containing 11 pseudogene 1 chr17 2613284 2613944 - 661 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SAMD11P1 NA 0.012 90-100% Testis 4.906892038 Breast_cancer,CRC NA NA boxplot AF038458.5 NA chr19 35960512 35964063 + 3552 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AF038458.5 NA 0.024 60-70% Testis 1.765570835 Breast_cancer,HCC,PAAD NA NA boxplot RP1-91J24.1 NA chr6 144257034 144257624 - 591 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-91J24.1 NA 0.024 50-60% NA NA Normal NA NA boxplot RP11-95O2.5 NA chr18 37243776 37247506 + 3731 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-95O2.5 NA 0.059 60-70% NA NA CRC,Normal NA NA boxplot RPS3AP22 ribosomal protein S3a pseudogene 22 chr5 88381957 88382725 + 769 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPS3AP22 NA 0.012 40-50% Brain 4.906892038 NA NA NA boxplot RP11-248J18.3 NA chr14 50723777 50724272 - 496 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-248J18.3 NA 0.4 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-357K9.2 NA chrX 37441523 37442068 + 546 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-357K9.2 NA 0.024 80-90% NA NA Normal NA NA boxplot CTC-523E23.11 NA chr19 34849278 34860576 - 11299 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-523E23.11 NA 0.682 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-109M17.2 NA chr9 10948372 10948481 - 110 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-109M17.2 NA 0.012 90-100% NA NA NA NA NA boxplot AC068858.1 NA chr11 44973902 44978028 + 4127 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC068858.1 NA 0.012 80-90% Testis 4.906892038 Breast_cancer,PAAD NA NA boxplot RP5-994D16.9 NA chr1 42775813 42776790 - 978 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-994D16.9 NA 0.082 10-20% NA NA HCC,Normal,PAAD NA NA boxplot LINC01023 long intergenic non-protein coding RNA 1023 chr5 108727825 108728260 - 436 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01023 exo_circ_049414,exo_circ_044145 0.482 30-40% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot GOLGA8CP golgin A8 family member C, pseudogene chr15 20562375 20575696 + 13322 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GOLGA8CP NA 0.024 80-90% Testis 4.87136321 Breast_cancer,HCC NA NA boxplot RP13-131K19.1 NA chr3 48979918 48983985 - 4068 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP13-131K19.1 NA 0.106 70-80% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CTD-3137H5.4 NA chr19 18448275 18448805 - 531 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-3137H5.4 NA 0.035 70-80% NA NA CRC,Normal NA NA boxplot CTD-2353N24.1 NA chr5 65732973 65733654 + 682 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2353N24.1 NA 0.047 60-70% Cervix 4.906892038 CRC,Normal,PAAD NA NA boxplot NTAN1P3 N-terminal asparagine amidase pseudogene 3 chr12 67424272 67424986 - 715 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NTAN1P3 NA 0.012 30-40% NA NA CRC NA NA boxplot LRRC75A-AS1 LRRC75A antisense RNA 1 chr17 16438822 16478678 + 39857 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LRRC75A-AS1 NA 1 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up) NA boxplot RPL29P24 ribosomal protein L29 pseudogene 24 chr12 120522664 120523443 - 780 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL29P24 NA 0.012 60-70% NA NA Normal NA NA boxplot RP3-405J10.5 NA chr12 50286244 50289231 + 2988 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-405J10.5 NA 0.035 50-60% NA NA Normal,PAAD NA NA boxplot SMARCE1P6 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 pseudogene 6 chr2 26149204 26150731 + 1528 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SMARCE1P6 NA 0.094 30-40% NA NA CRC,Normal,PAAD NA NA boxplot AC226119.5 NA chr4 3915183 3955419 - 40237 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC226119.5 NA 0.035 70-80% NA NA CRC,HCC,Normal NA NA boxplot CTD-2325P2.4 NA chr14 68627166 68628445 - 1280 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2325P2.4 NA 0.047 40-50% NA NA Breast_cancer,CRC,Normal NA NA boxplot RP5-856G1.2 NA chr6 1079929 1104946 + 25018 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-856G1.2 NA 0.012 90-100% NA NA HCC NA NA boxplot RP11-35G9.5 NA chr18 57639455 57738044 + 98590 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-35G9.5 exo_circ_020507,exo_circ_000515,exo_circ_032324,exo_circ_031352 0.929 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),PAAD(down) NA boxplot GPC5-AS1 GPC5 antisense RNA 1 chr13 92701389 92721614 - 20226 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GPC5-AS1 NA 0.047 70-80% NA NA CHD,HCC,Normal NA NA boxplot CTB-113I20.2 NA chr5 134005147 134005562 + 416 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTB-113I20.2 NA 0.129 60-70% NA NA Breast_cancer,CRC,HCC,PAAD NA NA boxplot RP11-111F5.4 NA chr9 62374128 62376836 - 2709 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-111F5.4 NA 0.4 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-30K9.5 NA chr15 58856831 58865063 - 8233 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-30K9.5 NA 0.035 70-80% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot JAKMIP2-AS1 JAKMIP2 antisense RNA 1 chr5 147559994 147662009 + 102016 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=JAKMIP2-AS1 NA 0.306 30-40% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RPS7P11 ribosomal protein S7 pseudogene 11 chr17 46721582 46722167 - 586 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPS7P11 NA 1 0-10% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot CTD-2530N21.5 NA chr8 22169338 22171710 + 2373 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2530N21.5 NA 0.024 50-60% NA NA Breast_cancer,CRC NA NA boxplot RP11-486L19.2 NA chr16 84192558 84197053 - 4496 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-486L19.2 NA 0.059 30-40% Testis 2.404018015 Breast_cancer,CRC,Normal NA NA boxplot RP11-466A19.1 NA chr17 32495536 32499333 + 3798 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-466A19.1 NA 0.035 80-90% NA NA Breast_cancer,CRC,Normal NA NA boxplot RP11-350F16.1 NA chr8 46922561 46928832 + 6272 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-350F16.1 NA 0.141 30-40% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot CTD-2013N17.1 NA chr19 16412684 16413576 + 893 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2013N17.1 NA 0.012 70-80% NA NA Breast_cancer,PAAD NA NA boxplot RP11-412P11.1 NA chr4 22997551 23056862 + 59312 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-412P11.1 NA 0.012 70-80% Testis 4.906892038 HCC NA NA boxplot RP11-74M13.4 NA chr12 56822985 56874268 + 51284 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-74M13.4 NA 0.012 80-90% Ovary 2.846821669 Breast_cancer,HCC NA NA boxplot CTB-41I6.2 NA chr17 8967523 8976995 + 9473 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTB-41I6.2 NA 0.765 10-20% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down) NA boxplot RP11-379B18.6 NA chr3 125774714 125797953 + 23240 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-379B18.6 NA 0.024 20-30% NA NA Normal NA NA boxplot RP11-631M6.2 NA chr5 61375112 61375855 + 744 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-631M6.2 NA 0.929 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down) NA boxplot RPL13AP25 ribosomal protein L13a pseudogene 25 chr13 54440704 54441315 - 612 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL13AP25 NA 1 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down) NA boxplot RP11-182N22.8 NA chr9 35096378 35098141 + 1764 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-182N22.8 NA 0.059 20-30% NA NA CRC,HCC,PAAD NA NA boxplot RP11-554I8.1 NA chr10 6618716 6625346 + 6631 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-554I8.1 NA 0.635 10-20% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot IFNL3P1 interferon, lambda 3 pseudogene 1 chr19 39236433 39237293 - 861 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=IFNL3P1 NA 0.165 40-50% Pancreas 2.952580865 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-411B10.3 NA chr18 14104542 14105226 + 685 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-411B10.3 NA 0.012 20-30% NA NA Normal NA NA boxplot RP11-395I6.2 NA chr4 40265472 40266457 + 986 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-395I6.2 NA 0.024 50-60% NA NA CRC,Normal NA NA boxplot TOMM20P2 TOMM20 pseudogene 2 chr17 35514766 35515186 - 421 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TOMM20P2 NA 0.835 0-10% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-847H18.2 NA chr12 34022281 34046417 - 24137 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-847H18.2 NA 0.082 50-60% NA NA HCC,Normal NA NA boxplot RP11-89C3.3 NA chr11 111089870 111090368 - 499 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-89C3.3 NA 0.035 10-20% NA NA CRC,Normal NA NA boxplot RP11-15E18.1 NA chr17 60526293 60550798 + 24506 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-15E18.1 NA 0.047 60-70% Testis 1.883816238 Breast_cancer,CRC,HCC,Normal NA NA boxplot RP5-1007F24.1 NA chr7 26538378 26541048 + 2671 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-1007F24.1 NA 0.059 40-50% NA NA HCC,Normal,PAAD NA NA boxplot RP11-423G4.10 NA chr12 108833721 108834384 - 664 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-423G4.10 NA 0.071 10-20% NA NA CRC,Normal,PAAD NA NA boxplot SHANK2-AS1 SHANK2 antisense RNA 1 chr11 70631094 70635490 + 4397 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SHANK2-AS1 NA 0.024 90-100% Testis 3.878755404 Breast_cancer,CHD,HCC NA NA boxplot RBPMS-AS1 RBPMS antisense RNA 1 chr8 30382119 30385401 - 3283 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RBPMS-AS1 NA 0.141 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot LINC00634 long intergenic non-protein coding RNA 634 chr22 41952165 41958933 + 6769 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00634 NA 0.012 90-100% Brain 3.531093742 Breast_cancer NA NA boxplot CTD-2516F10.2 NA chr11 7427266 7512515 - 85250 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2516F10.2 exo_circ_010808 0.659 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot WASH7P WAS protein family homolog 7 pseudogene chr12 14522 32015 - 17494 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=WASH7P NA 1 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up),CRC(up),HCC(up),PAAD(up) NA boxplot CTD-2058B24.2 NA chr14 38034287 38194281 - 159995 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2058B24.2 NA 0.024 70-80% Nerve 1.570510784 Normal,PAAD NA NA boxplot RP11-435F17.1 NA chr3 113850237 113850731 - 495 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-435F17.1 NA 0.012 90-100% NA NA CRC,HCC,Normal,PAAD NA NA boxplot AC005682.5 NA chr7 22854178 22861579 + 7402 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC005682.5 NA 0.824 10-20% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down) NA boxplot LINC00051 long intergenic non-protein coding RNA 51 chr8 142198356 142209003 + 10648 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00051 NA 0.012 40-50% NA NA Breast_cancer,HCC NA NA boxplot OR3A4P olfactory receptor family 3 subfamily A member 4 pseudogene chr17 3310312 3311189 + 878 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=OR3A4P NA 0.012 90-100% Testis 4.906892038 Breast_cancer,Normal NA NA boxplot RP11-517P14.7 NA chr10 43523256 43525217 + 1962 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-517P14.7 NA 0.094 30-40% NA NA CRC,Normal,PAAD NA NA boxplot RP4-565E6.1 NA chr1 148159213 148255012 - 95800 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-565E6.1 NA 0.071 50-60% NA NA Breast_cancer,CRC,HCC,PAAD NA NA boxplot RP5-1186N24.3 NA chr6 28587378 28591747 + 4370 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-1186N24.3 NA 0.024 20-30% Testis 3.565858058 PAAD NA NA boxplot RP3-522D1.1 NA chr1 112850028 112877871 + 27844 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-522D1.1 NA 0.2 70-80% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-175E9.1 NA chr8 23707141 23789487 + 82347 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-175E9.1 NA 0.012 50-60% NA NA Breast_cancer,CRC NA NA boxplot TBC1D3P2 TBC1 domain family member 3 pseudogene 2 chr17 62264705 62275655 - 10951 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TBC1D3P2 NA 0.024 90-100% Testis 4.906892038 Breast_cancer,HCC NA NA boxplot RPL23AP35 ribosomal protein L23a pseudogene 35 chr2 186261419 186261919 - 501 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL23AP35 exo_circ_038246 0.047 30-40% NA NA CRC,Normal NA NA boxplot PRR13P5 proline rich 13 pseudogene 5 chr19 39943239 39943680 - 442 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PRR13P5 NA 1 0-10% NA NA CHD,CRC,HCC,Normal,PAAD CHD(up),CRC(up),PAAD(up) NA boxplot CTD-2012J19.1 NA chr5 1614836 1616334 + 1499 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2012J19.1 NA 0.812 30-40% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(down) NA boxplot ARF4P2 ADP ribosylation factor 4 pseudogene 2 chr20 62872250 62873076 - 827 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ARF4P2 NA 0.012 50-60% Testis 3.683196647 Breast_cancer NA NA boxplot RP5-1029F21.2 NA chr17 552566 553417 + 852 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-1029F21.2 NA 0.012 90-100% NA NA Breast_cancer,HCC,Normal NA NA boxplot AC018766.6 NA chr19 49852887 49854967 - 2081 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC018766.6 NA 0.141 70-80% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-340L3.1 NA chr14 32879246 32882830 + 3585 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-340L3.1 NA 0.012 0-10% NA NA Breast_cancer,PAAD NA NA boxplot HNRNPA1P8 heterogeneous nuclear ribonucleoprotein A1 pseudogene 8 chr7 84983556 84984506 + 951 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HNRNPA1P8 NA 0.541 80-90% Testis 3.158525844 CHD,CRC,HCC,Normal,PAAD NA NA boxplot FAM83A-AS1 FAM83A antisense RNA 1 chr8 123201172 123202743 - 1572 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FAM83A-AS1 NA 0.024 80-90% NA NA Breast_cancer,CRC NA NA boxplot RP11-93K22.6 NA chr3 129954105 129969294 - 15190 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-93K22.6 exo_circ_054056 0.035 20-30% NA NA Normal,PAAD NA NA boxplot RP11-70L8.4 NA chr9 21858910 21861926 - 3017 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-70L8.4 NA 0.094 70-80% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-558O12.1 NA chrX 3717149 3717600 + 452 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-558O12.1 NA 0.012 20-30% Testis 4.648763104 Normal NA NA boxplot AC106053.1 NA chr2 18784807 18787752 + 2946 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC106053.1 exo_circ_031538,exo_circ_003373,exo_circ_036845 0.012 80-90% Testis 4.092496568 NA NA NA boxplot RP11-844P9.6 NA chr5 176173345 176199295 - 25951 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-844P9.6 NA 0.059 60-70% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot AL133243.1 NA chr2 32521927 32523547 + 1621 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AL133243.1 NA 0.2 20-30% NA NA Breast_cancer,CRC,Normal,PAAD NA NA boxplot RP11-569A11.2 NA chr1 202632428 202632911 + 484 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-569A11.2 NA 0.024 70-80% Testis 4.475146612 Breast_cancer,PAAD NA NA boxplot RP11-495K9.6 NA chr12 131662596 131664704 + 2109 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-495K9.6 NA 0.024 50-60% Testis 3.614810482 Breast_cancer,HCC,Normal NA NA boxplot SOX9-AS1 SOX9 antisense RNA 1 chr17 72034107 72237203 - 203097 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SOX9-AS1 NA 0.024 90-100% NA NA Breast_cancer,HCC NA NA boxplot P3H2-AS1 P3H2 antisense RNA 1 chr3 190120964 190144846 + 23883 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=P3H2-AS1 NA 0.035 50-60% NA NA HCC,Normal NA NA boxplot CTD-2653M23.3 NA chr5 36861736 36862217 - 482 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2653M23.3 NA 0.024 50-60% NA NA HCC,PAAD NA NA boxplot RP11-493E12.3 NA chr2 61115787 61164825 + 49039 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-493E12.3 exo_circ_052626 0.929 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down) NA boxplot MTND5P11 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 5 pseudogene 11 chr5 134924648 134926459 - 1812 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MTND5P11 NA 0.318 20-30% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-196I18.4 NA chr9 107117459 107121705 - 4247 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-196I18.4 NA 0.118 90-100% NA NA Normal NA NA boxplot MED28P1 mediator complex subunit 28 pseudogene 1 chr10 68991137 68991707 + 571 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MED28P1 NA 0.035 90-100% NA NA CRC,PAAD NA NA boxplot TAF1A-AS1 TAF1A antisense RNA 1 chr1 222589825 222593032 + 3208 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TAF1A-AS1 NA 0.329 20-30% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot PTENP1-AS PTENP1 antisense RNA chr9 33677268 33688011 + 10744 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PTENP1-AS NA 0.294 60-70% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-172F4.2 NA chr9 96407284 96407797 + 514 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-172F4.2 NA 0.859 20-30% NA NA CRC,HCC,Normal,PAAD CHD(down),PAAD(down) NA boxplot HM13-AS1 HM13 antisense RNA 1 chr20 31567707 31573263 - 5557 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HM13-AS1 NA 0.141 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot AC091177.1 NA chr17 30956280 30956961 - 682 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC091177.1 NA 0.4 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot SMAD1-AS2 SMAD1 antisense RNA 2 chr4 145497073 145502971 - 5899 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SMAD1-AS2 NA 0.012 80-90% NA NA HCC NA NA boxplot STAG3L3 stromal antigen 3-like 3 (pseudogene) chr7 72969696 73005922 - 36227 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=STAG3L3 NA 0.965 0-10% NA NA CHD,CRC,HCC,Normal,PAAD CHD(down),CRC(up),PAAD(up) NA boxplot AC007383.4 NA chr2 206115547 206122323 + 6777 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC007383.4 NA 0.165 60-70% NA NA CRC,HCC,Normal NA NA boxplot RPSAP61 ribosomal protein SA pseudogene 61 chrX 44741087 44741964 + 878 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPSAP61 NA 0.541 80-90% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-195F19.9 NA chr9 34665665 34681298 + 15634 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-195F19.9 NA 0.224 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot AC009229.5 NA chr2 38203363 38239590 - 36228 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC009229.5 NA 0.012 10-20% Nerve 2.914496521 NA NA NA boxplot CTD-2256P15.2 NA chr5 10352701 10353601 - 901 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2256P15.2 NA 0.294 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-449P15.1 NA chr7 1055360 1059261 - 3902 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-449P15.1 NA 0.247 10-20% NA NA HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot RP11-285C1.2 NA chr4 153034211 153091165 + 56955 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-285C1.2 NA 0.012 70-80% NA NA Breast_cancer,CRC NA NA boxplot KB-1125A3.11 NA chr22 23856427 23857039 - 613 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KB-1125A3.11 NA 0.141 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot GTF2IRD2P1 GTF2I repeat domain containing 2 pseudogene 1 chr7 73242751 73280119 - 37369 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GTF2IRD2P1 NA 0.906 10-20% NA NA CHD,CRC,HCC,Normal,PAAD CHD(up),CRC(up),HCC(up),PAAD(up) NA boxplot SOS1-IT1 SOS1 intronic transcript 1 chr2 38992279 38993857 - 1579 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SOS1-IT1 NA 0.435 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-434D9.2 NA chr5 67800740 67890096 - 89357 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-434D9.2 NA 0.012 20-30% NA NA HCC NA NA boxplot LOC440461 Rho GTPase activating protein 27 pseudogene chr17 68198921 68199596 + 676 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LOC440461 NA 0.212 20-30% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-344N17.11 NA chrX 48279423 48281792 + 2370 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-344N17.11 NA 0.012 90-100% NA NA PAAD NA NA boxplot RP11-566K19.9 NA chr15 23326256 23334127 - 7872 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-566K19.9 NA 0.024 60-70% Testis 4.88629752 HCC NA NA boxplot KNOP1P1 lysine-rich nucleolar protein 1 pseudogene 1 chr12 24583561 24584549 + 989 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KNOP1P1 NA 0.012 80-90% Testis 4.906892038 Breast_cancer,PAAD NA NA boxplot COX6A1P2 cytochrome c oxidase subunit VIa polypeptide 1 pseudogene 2 chr6 37044860 37045189 + 330 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=COX6A1P2 NA 1 0-10% NA NA CHD,CRC,HCC,Normal,PAAD CRC(up),HCC(up) NA boxplot HNRNPA3P8 heterogeneous nuclear ribonucleoprotein A3 pseudogene 8 chr3 80216261 80217234 + 974 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HNRNPA3P8 NA 0.012 0-10% NA NA Breast_cancer,PAAD NA NA boxplot CXXC1P1 CXXC finger protein 1 pseudogene 1 chrX 47707191 47753456 + 46266 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CXXC1P1 NA 0.012 80-90% NA NA Breast_cancer,Normal NA NA boxplot CTC-559E9.5 NA chr19 19788755 19790531 - 1777 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-559E9.5 NA 0.847 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down),PAAD(down) NA boxplot LEF1-AS1 LEF1 antisense RNA 1 chr4 108167525 108256836 + 89312 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LEF1-AS1 exo_circ_043957 0.765 10-20% Testis 4.018188531 Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot RP11-292E2.4 NA chr3 153431856 153443531 + 11676 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-292E2.4 NA 0.071 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot NBEAP3 neurobeachin pseudogene 3 chr22 15852990 15893942 + 40953 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NBEAP3 NA 0.094 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP5-991G20.1 NA chr16 72665170 72791624 + 126455 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-991G20.1 NA 0.741 10-20% Testis 1.268901361 Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down) NA boxplot RP11-24F11.5 NA chr3 46416524 46423591 - 7068 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-24F11.5 NA 0.082 40-50% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot RPS14P8 ribosomal protein S14 pseudogene 8 chr5 116562562 116562930 + 369 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPS14P8 NA 0.024 90-100% NA NA CRC NA NA boxplot HSPB1P1 heat shock protein family B (small) member 1 pseudogene 1 chr9 72007881 72008136 - 256 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HSPB1P1 NA 0.235 90-100% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot AC009120.3 NA chr16 74312609 74313390 - 782 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC009120.3 NA 0.176 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot VDAC1P6 voltage-dependent anion channel 1 pseudogene 6 chrY 5207215 5208069 - 855 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=VDAC1P6 NA 0.965 0-10% Muscle 3.084223704 CHD,CRC,HCC,Normal,PAAD CRC(down) NA boxplot RP11-365D9.1 NA chr1 235614674 235616397 + 1724 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-365D9.1 NA 0.012 60-70% NA NA Breast_cancer,PAAD NA NA boxplot CTD-3096M3.1 NA chr18 5310396 5317664 + 7269 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-3096M3.1 NA 0.2 40-50% Spleen 4.182159874 CRC,HCC,Normal,PAAD NA NA boxplot RP11-63P12.2 NA chr9 72275453 72275973 + 521 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-63P12.2 NA 0.024 10-20% NA NA Breast_cancer,PAAD NA NA boxplot CTD-3193O13.11 NA chr19 7870561 7871296 + 736 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-3193O13.11 NA 0.012 60-70% NA NA Normal NA NA boxplot RP11-121M22.1 NA chr11 130314993 130403657 + 88665 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-121M22.1 NA 0.329 20-30% Testis 1.740234349 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AP000320.7 NA chr21 34073592 34360033 + 286442 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AP000320.7 NA 0.906 10-20% NA NA CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-550H2.1 NA chr1 75932479 76019356 + 86878 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-550H2.1 NA 0.024 80-90% Testis 4.906892038 CRC,Normal NA NA boxplot RP11-863P13.6 NA chr16 88087387 88087932 + 546 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-863P13.6 NA 0.035 20-30% NA NA CRC,PAAD NA NA boxplot LRRC37A17P leucine-rich repeat containing 37 member A17, pseudogene chr17 46978481 47054569 + 76089 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LRRC37A17P NA 0.976 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down),HCC(down) NA boxplot RP4-753M9.1 NA chr22 45000565 45003619 - 3055 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-753M9.1 NA 0.035 30-40% Testis 3.102370126 Breast_cancer,Normal,PAAD NA NA boxplot LA16c-60G3.6 NA chr22 15541436 15578006 + 36571 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LA16c-60G3.6 NA 0.012 60-70% Testis 4.906892038 HCC NA NA boxplot SMG1P1 SMG1 pseudogene 1 chr16 22437008 22492220 + 55213 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SMG1P1 NA 1 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP1-30M3.5 NA chr6 24700907 24701793 - 887 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-30M3.5 NA 0.565 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot ABCA9-AS1 ABCA9 antisense RNA 1 chr17 68944531 69042784 + 98254 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ABCA9-AS1 NA 0.2 30-40% Spleen 3.322404159 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot LINC00864 long intergenic non-protein coding RNA 864 chr10 87397023 87424792 - 27770 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00864 NA 0.024 60-70% Kidney 3.344085733 Breast_cancer,HCC,Normal,PAAD NA NA boxplot RP11-105N14.2 NA chr2 213266995 213276152 - 9158 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-105N14.2 NA 0.012 70-80% Testis 3.868811843 PAAD NA NA boxplot RP11-187C18.3 NA chr9 41479960 41480548 + 589 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-187C18.3 NA 0.706 10-20% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(down) NA boxplot RP11-1134I14.2 NA chr8 47089572 47198861 - 109290 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1134I14.2 NA 0.024 70-80% Testis 4.777906603 Breast_cancer,HCC NA NA boxplot AC061992.2 NA chr17 78315729 78347798 + 32070 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC061992.2 NA 0.082 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-173A16.2 NA chr18 62245810 62247412 + 1603 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-173A16.2 exo_circ_057798 0.165 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot STAM-AS1 STAM antisense RNA 1 (head to head) chr10 17641284 17643878 - 2595 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=STAM-AS1 NA 0.035 40-50% NA NA Breast_cancer,Normal NA NA boxplot RP11-568A7.3 NA chr6 167237508 167240480 - 2973 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-568A7.3 NA 0.012 30-40% Testis 3.440721971 Breast_cancer,HCC NA NA boxplot RP11-78A19.4 NA chr18 11857155 11857554 - 400 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-78A19.4 NA 0.059 40-50% NA NA CRC,PAAD NA NA boxplot RP11-659G9.3 NA chr11 82963681 83039115 - 75435 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-659G9.3 NA 0.012 60-70% NA NA Breast_cancer,CRC,PAAD NA NA boxplot XXbac-B135H6.15 NA chr22 20957092 20964679 + 7588 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=XXbac-B135H6.15 NA 0.671 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RPL10AP6 ribosomal protein L10a pseudogene 6 chr3 61742455 61743106 - 652 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL10AP6 NA 1 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CRC(down) NA boxplot RP11-927P21.1 NA chr17 64892729 64910180 + 17452 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-927P21.1 NA 0.271 70-80% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-66H6.3 NA chr16 11066496 11071102 - 4607 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-66H6.3 NA 0.024 30-40% Testis 4.71494101 Breast_cancer,Normal NA NA boxplot GLYATL1P4 glycine-N-acyltransferase like 1 pseudogene 4 chr11 59042737 59050971 + 8235 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GLYATL1P4 NA 0.071 80-90% NA NA Normal,PAAD NA NA boxplot RP11-493E3.1 NA chr15 89876540 89877285 + 746 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-493E3.1 NA 0.012 80-90% NA NA HCC NA NA boxplot CTD-2561J22.2 NA chr19 21382865 21387177 + 4313 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2561J22.2 NA 0.494 10-20% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down) NA boxplot GABARAPL3 GABA(A) receptors associated protein like 3, pseudogene chr15 90348844 90349197 - 354 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GABARAPL3 NA 0.012 80-90% Testis 3.991155267 Breast_cancer,Normal NA NA boxplot ANP32C acidic nuclear phosphoprotein 32 family member C chr4 164197007 164197711 - 705 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ANP32C NA 0.459 80-90% Brain 4.906892038 CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-95M5.1 NA chr3 14799331 14811414 - 12084 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-95M5.1 NA 0.012 50-60% Testis 3.75503591 Breast_cancer,HCC NA NA boxplot LINC01187 long intergenic non-protein coding RNA 1187 chr5 170191579 170199141 - 7563 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01187 NA 0.071 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot STAG3L1 stromal antigen 3-like 1 (pseudogene) chr7 75359194 75395383 + 36190 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=STAG3L1 NA 0.976 0-10% NA NA CHD,CRC,HCC,Normal,PAAD PAAD(up) NA boxplot AIMP1P2 aminoacyl tRNA synthetase complex-interacting multifunctional protein 1 pseudogene 2 chr1 172885947 172886258 - 312 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AIMP1P2 NA 0.012 60-70% NA NA NA NA NA boxplot RP11-395B7.4 NA chr7 101014320 101017608 - 3289 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-395B7.4 NA 0.329 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-1055B8.3 NA chr17 81376001 81385360 - 9360 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1055B8.3 NA 0.035 60-70% Brain 1.185244738 Breast_cancer,CRC,PAAD NA NA boxplot AP000797.3 NA chr11 115659658 115843146 + 183489 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AP000797.3 NA 0.012 80-90% Brain 4.906892038 HCC NA NA boxplot RP11-355N15.2 NA chr15 58456188 58456348 + 161 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-355N15.2 NA 0.047 40-50% NA NA CRC,Normal,PAAD NA NA boxplot RP11-528A10.2 NA chr6 18363417 18365423 - 2007 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-528A10.2 NA 0.012 90-100% Testis 4.09017609 HCC NA NA boxplot AC009005.2 NA chr19 567210 572228 - 5019 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC009005.2 NA 0.318 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-204C23.1 NA chr3 1962381 1987470 - 25090 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-204C23.1 NA 0.024 90-100% Testis 4.906892038 Normal NA NA boxplot ACTG1P12 actin gamma 1 pseudogene 12 chr3 12070195 12071360 + 1166 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ACTG1P12 NA 0.012 50-60% Testis 3.243159232 NA NA NA boxplot RP11-97O12.5 NA chr15 88477871 88478387 - 517 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-97O12.5 NA 0.306 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RPS15AP7 ribosomal protein S15a pseudogene 7 chr1 62190522 62190926 + 405 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPS15AP7 NA 0.012 90-100% NA NA NA NA NA boxplot CTC-444N24.11 NA chr19 57304305 57308562 + 4258 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-444N24.11 NA 0.906 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-10A14.3 NA chr8 9141424 9145435 + 4012 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-10A14.3 NA 0.141 70-80% Testis 2.800373152 HCC,Normal,PAAD NA NA boxplot MGC16275 uncharacterized protein MGC16275 chr17 74209980 74213342 - 3363 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MGC16275 NA 0.871 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-430C7.4 NA chr1 204603035 204616565 + 13531 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-430C7.4 NA 0.188 60-70% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot RP11-116D17.5 NA chr12 115332146 115332566 - 421 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-116D17.5 NA 0.012 90-100% NA NA HCC NA NA boxplot AC062020.1 NA chr2 123066151 123073481 - 7331 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC062020.1 NA 0.012 40-50% Testis 4.906892038 Normal NA NA boxplot RP11-578F21.3 NA chr15 28332237 28336609 + 4373 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-578F21.3 NA 0.094 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CTD-2302E22.5 NA chr14 63594031 63595291 - 1261 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2302E22.5 NA 0.141 70-80% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot CTD-2536I1.3 NA chr15 95225326 95225864 - 539 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2536I1.3 NA 0.012 80-90% NA NA Normal NA NA boxplot RP11-61G19.1 NA chr4 10685003 10697661 + 12659 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-61G19.1 NA 0.035 80-90% NA NA CRC,HCC,Normal NA NA boxplot RP11-427P5.3 NA chr3 46918807 46918935 - 129 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-427P5.3 NA 0.329 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-332H18.3 NA chr17 61382785 61384680 + 1896 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-332H18.3 exo_circ_057615 0.024 90-100% NA NA Breast_cancer,CRC,PAAD NA NA boxplot LINC01513 NA chr5 10479371 10482309 + 2939 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01513 NA 0.106 50-60% NA NA CRC,HCC,Normal NA NA boxplot RP11-445N18.7 NA chr10 45147394 45171389 + 23996 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-445N18.7 NA 0.035 70-80% NA NA Normal NA NA boxplot AC091153.4 NA chr17 4673830 4696831 + 23002 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC091153.4 NA 0.024 90-100% NA NA CRC,Normal NA NA boxplot AC093162.5 NA chr2 85315041 85316529 + 1489 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC093162.5 NA 0.047 30-40% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot RP11-309L24.10 NA chr7 128952527 128953316 - 790 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-309L24.10 NA 0.141 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-93B14.10 NA chr20 62651272 62652186 - 915 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-93B14.10 NA 0.541 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CH17-140K24.2 NA chr5 141136683 141245380 - 108698 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CH17-140K24.2 NA 0.035 90-100% NA NA HCC NA NA boxplot DPY19L2P3 DPY19L2 pseudogene 3 chr7 29650227 29742594 + 92368 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DPY19L2P3 NA 0.353 40-50% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot MEIS1-AS2 MEIS1 antisense RNA 2 chr2 66439088 66441836 - 2749 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MEIS1-AS2 NA 0.424 50-60% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot CTD-2287O16.5 NA chr5 116083807 116085416 - 1610 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2287O16.5 NA 0.282 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-624C23.1 NA chr8 24295814 24912073 - 616260 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-624C23.1 NA 0.612 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AOX3P NA chr2 200678233 200738781 + 60549 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AOX3P NA 0.118 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot LINC00892 long intergenic non-protein coding RNA 892 chrX 136639543 136642429 + 2887 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00892 NA 0.929 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down) NA boxplot SNHG25 small nucleolar RNA host gene 25 chr17 64145970 64146476 + 507 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SNHG25 NA 0.212 70-80% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP13-582O9.7 NA chr8 143290399 143290621 - 223 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP13-582O9.7 NA 0.106 20-30% NA NA Breast_cancer,CRC,Normal,PAAD NA NA boxplot RP11-136K14.3 NA chr6 150650772 150652025 - 1254 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-136K14.3 NA 0.012 90-100% Spleen 2.30318733 Normal NA NA boxplot AC113189.5 NA chr17 7581964 7584072 - 2109 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC113189.5 NA 0.753 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CTA-150C2.13 NA chr22 38921227 38924708 + 3482 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTA-150C2.13 NA 0.035 40-50% NA NA Breast_cancer,Normal NA NA boxplot GS1-166A23.2 NA chr7 16593626 16594224 - 599 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GS1-166A23.2 NA 0.059 70-80% NA NA CRC,Normal,PAAD NA NA boxplot CTB-55O6.10 NA chr19 14119106 14119537 + 432 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTB-55O6.10 NA 0.071 50-60% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot RP11-6C10.1 NA chr2 175033778 175034192 - 415 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-6C10.1 NA 0.035 70-80% NA NA CRC,Normal NA NA boxplot BRD9P2 NA chr5 767382 768930 - 1549 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=BRD9P2 NA 0.271 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-1022B3.1 NA chr12 63292625 63360037 - 67413 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1022B3.1 NA 0.012 20-30% Thyroid 4.481561569 HCC,Normal NA NA boxplot RP11-524F11.2 NA chr17 17591428 17610485 + 19058 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-524F11.2 NA 0.035 20-30% NA NA Breast_cancer,HCC,Normal NA NA boxplot LA16c-352F7.1 NA chr16 85489813 85490831 + 1019 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LA16c-352F7.1 NA 0.118 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RPL23AP21 ribosomal protein L23a pseudogene 21 chr1 258568 259024 - 457 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL23AP21 NA 0.6 30-40% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-54D18.4 NA chr9 15055057 15056052 + 996 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-54D18.4 NA 0.918 20-30% NA NA CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-572P18.1 NA chr10 120354701 120355183 - 483 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-572P18.1 NA 0.929 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(up),HCC(up),PAAD(up) NA boxplot FLVCR1-AS1 FLVCR1 antisense RNA 1 (head to head) chr1 212852108 212858088 - 5981 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FLVCR1-AS1 NA 0.694 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot DSG2-AS1 DSG2 antisense RNA 1 chr18 31542146 31556911 - 14766 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DSG2-AS1 NA 0.059 70-80% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC006378.2 NA chr7 93969442 94011113 + 41672 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC006378.2 NA 0.059 20-30% NA NA HCC,Normal NA NA boxplot EIF4BP9 eukaryotic translation initiation factor 4B pseudogene 9 chrX 66074835 66076347 - 1513 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=EIF4BP9 NA 0.012 0-10% Fallopian Tube 4.906892038 Breast_cancer,PAAD NA NA boxplot LINC00636 long intergenic non-protein coding RNA 636 chr3 107883248 107928907 + 45660 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00636 NA 0.082 70-80% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot AC073254.1 NA chr2 232580948 232611971 - 31024 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC073254.1 NA 0.329 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot RP11-61L14.6 NA chr1 154579065 154579663 - 599 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-61L14.6 NA 0.047 70-80% NA NA CRC,Normal,PAAD NA NA boxplot RP11-474C8.3 NA chr12 48160245 48160878 - 634 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-474C8.3 NA 0.165 60-70% Testis 4.906892038 CRC,HCC,Normal,PAAD NA NA boxplot RP11-196G11.5 NA chr16 31122235 31124064 + 1830 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-196G11.5 NA 0.859 10-20% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(down) NA boxplot RP13-766D20.1 NA chr17 81513063 81513184 + 122 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP13-766D20.1 NA 0.035 80-90% Testis 4.906892038 Breast_cancer,Normal NA NA boxplot RP11-149I2.4 NA chr9 21995482 21996013 + 532 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-149I2.4 NA 0.035 60-70% Testis 4.410907761 Breast_cancer,CRC,Normal,PAAD NA NA boxplot LIPC-AS1 NA chr15 58434890 58498735 - 63846 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LIPC-AS1 NA 0.035 40-50% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot HERC2P4 hect domain and RLD 2 pseudogene 4 chr16 32103245 32188107 - 84863 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HERC2P4 NA 0.388 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-57H12.3 NA chr1 95163219 95233982 - 70764 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-57H12.3 NA 0.365 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RPS14P4 ribosomal protein S14 pseudogene 4 chr2 111295629 111296046 - 418 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPS14P4 NA 0.106 30-40% Thyroid 4.906892038 CRC,Normal,PAAD NA NA boxplot RP11-372K14.2 NA chr4 151139991 151141103 + 1113 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-372K14.2 NA 0.282 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-498C9.4 NA chr17 81862778 81863102 + 325 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-498C9.4 NA 0.012 40-50% NA NA NA NA NA boxplot RP11-753H16.3 NA chr12 54353661 54497688 + 144028 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-753H16.3 NA 0.082 40-50% Bladder 2.354719088 CRC,HCC,Normal,PAAD NA NA boxplot RP11-736K20.6 NA chr11 86955619 87000959 + 45341 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-736K20.6 NA 0.106 30-40% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot PTCHD3P2 patched domain containing 3 pseudogene 2 chr2 169767185 169768799 - 1615 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PTCHD3P2 NA 0.012 90-100% Testis 1.58688974 Breast_cancer,Normal,PAAD NA NA boxplot LINC00656 long intergenic non-protein coding RNA 656 chr20 23125068 23132621 - 7554 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00656 NA 0.071 70-80% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot RP11-30K9.6 NA chr15 58768072 58770974 - 2903 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-30K9.6 NA 0.129 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot ZNF571-AS1 ZNF571 antisense RNA 1 chr19 37548914 37587348 + 38435 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ZNF571-AS1 NA 0.565 20-30% Testis 1.599655085 Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-626P14.2 NA chr14 26809417 26836458 + 27042 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-626P14.2 NA 0.012 80-90% Testis 4.259861835 NA NA NA boxplot RPS26P8 ribosomal protein S26 pseudogene 8 chr17 45608571 45608918 + 348 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPS26P8 NA 0.906 0-10% Testis 2.962504669 CHD,CRC,HCC,Normal,PAAD CHD(up),CRC(up),HCC(up),PAAD(up) NA boxplot RP11-374F3.5 NA chr13 30344672 30347167 + 2496 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-374F3.5 NA 0.082 40-50% NA NA CRC,HCC,Normal NA NA boxplot LINC01068 long intergenic non-protein coding RNA 1068 chr13 79566727 79571436 + 4710 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01068 NA 0.047 10-20% Testis 3.413429441 HCC,Normal NA NA boxplot PNKDP1 PNKD pseudogene 1 chrX 131803312 131803741 - 430 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PNKDP1 NA 0.012 90-100% NA NA Breast_cancer NA NA boxplot RP11-64D24.4 NA chr11 114360635 114380045 - 19411 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-64D24.4 NA 0.012 30-40% Testis 1.03653494 Breast_cancer,PAAD NA NA boxplot RP11-521B24.3 NA chr14 105416884 105419739 - 2856 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-521B24.3 exo_circ_005121 0.329 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot LINC01485 long intergenic non-protein coding RNA 1485 chr5 173786790 173809039 - 22250 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01485 NA 0.071 40-50% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot RP11-108H9.1 NA chr13 54940843 54986719 + 45877 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-108H9.1 NA 0.012 40-50% NA NA Normal NA NA boxplot LINC00303 long intergenic non-protein coding RNA 303 chr1 204032447 204041265 - 8819 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00303 NA 0.024 10-20% Testis 4.202483068 Breast_cancer,Normal,PAAD NA NA boxplot ALG1L9P asparagine-linked glycosylation 1-like 9, pseudogene chr11 71800541 71804640 - 4100 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ALG1L9P NA 0.2 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-347P5.1 NA chr2 196151263 196154881 + 3619 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-347P5.1 NA 0.059 80-90% NA NA Breast_cancer,CRC,Normal,PAAD NA NA boxplot LINC01481 long intergenic non-protein coding RNA 1481 chr12 70219132 70221862 - 2731 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01481 exo_circ_022716 0.882 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-403E24.1 NA chrX 64144872 64147052 - 2181 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-403E24.1 NA 0.024 70-80% Ovary 2.655365544 CRC,Normal NA NA boxplot SNHG3 small nucleolar RNA host gene 3 chr1 28505980 28510892 + 4913 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SNHG3 NA 0.941 0-10% NA NA CHD,CRC,HCC,Normal,PAAD CHD(down),CRC(up),PAAD(up) NA boxplot MARK2P9 MAP/microtubule affinity-regulating kinase 2 pseudogene 9 chr10 92418667 92420875 + 2209 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MARK2P9 NA 0.035 30-40% Testis 3.263788116 Breast_cancer,Normal NA NA boxplot RP11-474B12.1 NA chr16 47299447 47317814 + 18368 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-474B12.1 NA 0.024 80-90% Testis 4.305951453 Normal NA NA boxplot AC017035.2 NA chr2 197028711 197030143 - 1433 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC017035.2 NA 0.141 30-40% NA NA CRC,HCC,Normal NA NA boxplot FAM90A2P family with sequence similarity 90, member A2 pseudogene chr8 12172202 12178575 - 6374 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FAM90A2P NA 0.012 10-20% NA NA HCC NA NA boxplot NBR2 neighbor of BRCA1 gene 2 (non-protein coding) chr17 43125610 43153671 + 28062 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NBR2 NA 0.894 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot CBX1P4 chromobox 1 pseudogene 4 chrX 17282637 17283093 + 457 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CBX1P4 NA 0.012 70-80% NA NA CRC NA NA boxplot SEPT14P19 NA chr19 186373 195696 - 9324 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SEPT14P19 NA 0.047 90-100% NA NA CRC,PAAD NA NA boxplot RP11-982M15.8 NA chr14 104661120 104665558 - 4439 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-982M15.8 NA 0.588 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(up) NA boxplot RP11-305O6.3 NA chr12 65281657 65286728 + 5072 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-305O6.3 NA 0.035 10-20% NA NA Breast_cancer,Normal,PAAD NA NA boxplot RP11-745C15.2 NA chr7 54759425 54804928 + 45504 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-745C15.2 NA 0.047 20-30% Testis 4.274939291 CRC,Normal,PAAD NA NA boxplot RP11-554D15.1 NA chr6 74069451 74690727 + 621277 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-554D15.1 NA 0.024 80-90% Fallopian Tube 4.063740154 Normal,PAAD NA NA boxplot DYNLT3P2 dynein, light chain, Tctex-type 3 pseudogene 2 chr2 128199901 128200195 + 295 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DYNLT3P2 NA 0.035 70-80% NA NA CRC,Normal NA NA boxplot RP11-177C12.1 NA chr4 37868292 37869978 + 1687 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-177C12.1 NA 0.647 10-20% NA NA CRC,HCC,Normal,PAAD CHD(down),HCC(down),PAAD(down) NA boxplot RP11-567C2.1 NA chr12 90107739 90112779 + 5041 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-567C2.1 NA 0.024 20-30% Testis 1.356896667 Normal NA NA boxplot CTC-451P13.1 NA chr5 79284132 79284918 - 787 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-451P13.1 NA 0.376 80-90% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP3-465N24.6 NA chr1 25247837 25248321 + 485 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-465N24.6 NA 0.094 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-501C14.7 NA chr17 49037122 49037429 + 308 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-501C14.7 NA 0.024 0-10% NA NA PAAD NA NA boxplot RP11-571M6.18 NA chr12 57814494 57814926 + 433 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-571M6.18 NA 0.024 80-90% NA NA Normal,PAAD NA NA boxplot ZNF252P-AS1 ZNF252P antisense RNA 1 chr8 145002811 145006046 + 3236 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ZNF252P-AS1 NA 0.129 80-90% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CTB-193M12.1 NA chr16 15608474 15610563 + 2090 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTB-193M12.1 NA 0.024 80-90% NA NA HCC NA NA boxplot RP1-292B18.1 NA chr6 151099529 151099933 + 405 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-292B18.1 NA 0.082 40-50% NA NA HCC,Normal,PAAD NA NA boxplot KRT18P12 keratin 18 pseudogene 12 chr1 214532195 214533467 + 1273 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KRT18P12 NA 0.118 70-80% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC008175.1 NA chrY 22438940 22485592 + 46653 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC008175.1 NA 0.035 80-90% Testis 4.906892038 CRC,HCC,Normal,PAAD NA NA boxplot RP3-388M5.9 NA chr22 43812456 43817394 + 4939 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-388M5.9 NA 0.035 30-40% NA NA CRC,Normal NA NA boxplot CH507-338C24.2 NA chr21 7626344 7627528 - 1185 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CH507-338C24.2 NA 0.082 70-80% NA NA CRC,HCC,PAAD NA NA boxplot ADAMTS9-AS2 ADAMTS9 antisense RNA 2 chr3 64684909 65011468 + 326560 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ADAMTS9-AS2 NA 0.741 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD PAAD(up) NA boxplot LL22NC03-N64E9.1 NA chr22 15796959 15798346 + 1388 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LL22NC03-N64E9.1 NA 0.106 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CTD-2555A7.2 NA chr16 89046172 89052965 - 6794 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2555A7.2 NA 0.012 50-60% Brain 3.672717774 Breast_cancer NA NA boxplot AC005253.4 NA chr19 18568506 18569375 - 870 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC005253.4 NA 0.447 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot SMARCE1P5 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 pseudogene 5 chr13 44594858 44596082 + 1225 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SMARCE1P5 NA 0.882 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up),HCC(down) NA boxplot AOC4P amine oxidase, copper containing 4, pseudogene chr17 42865922 42874369 + 8448 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AOC4P NA 0.024 70-80% NA NA Breast_cancer,PAAD NA NA boxplot RPL12P35 ribosomal protein L12 pseudogene 35 chr15 72379215 72379710 - 496 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL12P35 NA 0.129 80-90% NA NA Breast_cancer,CHD,HCC,Normal,PAAD NA NA boxplot RP1-111C20.3 NA chr6 159064728 159065273 - 546 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-111C20.3 NA 0.071 60-70% Adrenal Gland 4.906892038 HCC,Normal,PAAD NA NA boxplot XPOTP1 exportin, tRNA pseudogene 1 chr20 34213495 34215892 - 2398 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=XPOTP1 NA 0.565 30-40% Skin 1.037767988 CHD,CRC,HCC,Normal,PAAD NA NA boxplot PRRT3-AS1 PRRT3 antisense RNA 1 chr3 9947404 9954787 + 7384 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PRRT3-AS1 NA 0.188 10-20% NA NA CRC,HCC,Normal,PAAD PAAD(up) NA boxplot RP11-57G10.8 NA chr10 67849525 67850746 + 1222 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-57G10.8 NA 0.106 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot AC006372.4 NA chr7 157466231 157499716 + 33486 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC006372.4 NA 0.024 30-40% Testis 2.290766497 Breast_cancer,Normal NA NA boxplot RP5-1107A17.4 NA chr17 56982749 56985104 + 2356 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-1107A17.4 NA 0.059 50-60% NA NA Breast_cancer,CRC,Normal NA NA boxplot RP11-455I9.1 NA chr7 93954044 93956519 - 2476 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-455I9.1 NA 0.106 60-70% NA NA Breast_cancer,CRC,Normal,PAAD NA NA boxplot ZMIZ1-AS1 ZMIZ1 antisense RNA 1 chr10 78943328 79067895 - 124568 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ZMIZ1-AS1 NA 0.294 20-30% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot CTB-50L17.16 NA chr19 4457962 4471493 - 13532 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTB-50L17.16 NA 0.082 80-90% Testis 2.156450949 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC015922.5 NA chr17 15829369 15908632 + 79264 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC015922.5 NA 0.012 70-80% Testis 4.906892038 HCC NA NA boxplot USP12PX ubiquitin specific peptidase 12 pseudogene, X-linked chrX 90112650 90113706 + 1057 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=USP12PX NA 0.235 90-100% NA NA CRC,HCC,Normal,PAAD NA NA boxplot TTTY2 testis-specific transcript, Y-linked 2 (non-protein coding) chrY 9740584 9758476 + 17893 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TTTY2 NA 0.012 80-90% Testis 4.906892038 CRC,HCC NA NA boxplot ARSD-AS1 ARSD antisense RNA 1 chrX 2904904 2906081 + 1178 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ARSD-AS1 NA 0.106 30-40% NA NA CRC,Normal,PAAD NA NA boxplot BRDTP1 bromodomain, testis-specific pseudogene 1 chrX 96337236 96337912 - 677 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=BRDTP1 NA 0.024 80-90% NA NA PAAD NA NA boxplot RP11-158K1.3 NA chr8 124488510 124491643 + 3134 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-158K1.3 NA 0.565 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP3-395M20.8 NA chr1 2549920 2557031 - 7112 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-395M20.8 NA 0.871 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot AC005614.5 NA chr19 40048757 40090925 - 42169 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC005614.5 NA 0.906 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down) NA boxplot RP11-799D4.3 NA chr17 35164243 35167012 - 2770 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-799D4.3 NA 0.035 60-70% Testis 3.665211216 CRC,Normal NA NA boxplot RP11-196E1.3 NA chr11 119608423 119659284 + 50862 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-196E1.3 NA 0.024 80-90% Brain 1.567272399 Breast_cancer,PAAD NA NA boxplot RP11-188P17.2 NA chr4 182881777 182882203 - 427 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-188P17.2 NA 0.047 90-100% NA NA CRC,Normal,PAAD NA NA boxplot AC011738.4 NA chr7 43508728 43522542 - 13815 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC011738.4 NA 0.012 50-60% Testis 1.721350172 Breast_cancer NA NA boxplot C3orf79 chromosome 3 open reading frame 79 chr3 153484495 153502697 + 18203 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=C3orf79 NA 0.047 90-100% NA NA CRC,Normal,PAAD NA NA boxplot BNIP3P6 BCL2/adenovirus E1B 19kDa interacting protein 3 pseudogene 6 chr14 18418775 18419273 + 499 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=BNIP3P6 NA 0.024 40-50% NA NA PAAD NA NA boxplot CTD-2308G16.1 NA chr15 51752485 51756475 + 3991 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2308G16.1 NA 0.024 80-90% Testis 2.30432011 CRC,Normal NA NA boxplot GLTSCR2-AS1 GLTSCR2 antisense RNA 1 chr19 47757036 47768840 - 11805 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GLTSCR2-AS1 NA 0.012 30-40% NA NA Breast_cancer,HCC NA NA boxplot HNRNPCP2 heterogeneous nuclear ribonucleoprotein C pseudogene 2 chr2 189923336 189924216 + 881 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HNRNPCP2 NA 1 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up) NA boxplot SDCBPP2 syndecan binding protein (syntenin) pseudogene 2 chr8 69942948 69944648 + 1701 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SDCBPP2 NA 0.035 30-40% Testis 3.627504805 HCC,Normal NA NA boxplot AC091493.2 NA chr3 16687986 16697479 - 9494 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC091493.2 NA 0.106 60-70% Testis 4.906892038 CRC,HCC,Normal,PAAD NA NA boxplot PPIAP13 peptidylprolyl isomerase A (cyclophilin A) pseudogene 13 chr10 75089248 75089725 - 478 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PPIAP13 NA 0.012 90-100% Muscle 4.615697741 Normal NA NA boxplot RP11-109L13.1 NA chr11 117135528 117138582 + 3055 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-109L13.1 NA 0.612 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-661A12.4 NA chr8 143542110 143542400 + 291 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-661A12.4 NA 0.059 80-90% NA NA Normal,PAAD NA NA boxplot ENPP7P10 ectonucleotide pyrophosphatase/phosphodiesterase 7 pseudogene 10 chr4 9079023 9141608 + 62586 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ENPP7P10 NA 0.024 90-100% NA NA Breast_cancer,HCC,PAAD NA NA boxplot RP11-93B14.4 NA chr20 62732566 62735347 - 2782 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-93B14.4 NA 0.024 80-90% NA NA Breast_cancer,PAAD NA NA boxplot YBX1P10 Y-box binding protein 1 pseudogene 10 chr9 35971344 35972318 - 975 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=YBX1P10 NA 1 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot FTH1P5 ferritin, heavy polypeptide 1 pseudogene 5 chr6 50912712 50913256 - 545 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FTH1P5 NA 1 0-10% NA NA CHD,CRC,HCC,Normal,PAAD CHD(up),CRC(up),HCC(up),PAAD(up) NA boxplot RP11-701P16.2 NA chr4 184813619 184821300 + 7682 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-701P16.2 NA 0.094 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CTB-11I22.2 NA chr5 159227715 159245127 + 17413 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTB-11I22.2 NA 0.024 10-20% NA NA CRC,HCC NA NA boxplot CTD-3065B20.3 NA chr15 90604225 90614558 - 10334 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-3065B20.3 NA 0.188 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot HMGN1P14 high mobility group nucleosome binding domain 1 pseudogene 14 chr5 111846050 111846566 - 517 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HMGN1P14 NA 0.012 0-10% NA NA CRC NA NA boxplot RP11-530C5.4 NA chr12 79818784 79819465 - 682 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-530C5.4 NA 0.118 60-70% NA NA CRC,Normal,PAAD NA NA boxplot LINC00365 long intergenic non-protein coding RNA 365 chr13 30103178 30108875 - 5698 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00365 NA 0.024 20-30% Stomach 1.923888309 Breast_cancer,PAAD NA NA boxplot RP11-89H19.2 NA chr12 47905122 47906865 + 1744 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-89H19.2 NA 0.024 50-60% NA NA Breast_cancer,Normal,PAAD NA NA boxplot LINC00377 long intergenic non-protein coding RNA 377 chr13 81043670 81044442 + 773 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00377 NA 0.012 80-90% NA NA Normal NA NA boxplot RP11-334A14.2 NA chr1 52993201 52993702 - 502 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-334A14.2 NA 0.906 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down) NA boxplot AC092755.4 NA chr15 59644298 59672302 - 28005 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC092755.4 NA 0.024 70-80% NA NA CRC NA NA boxplot GRPEL2-AS1 GRPEL2 antisense RNA 1 chr5 149348116 149357642 - 9527 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GRPEL2-AS1 NA 0.071 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP3-324O17.7 NA chr20 31535263 31535626 + 364 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-324O17.7 NA 0.059 80-90% NA NA CRC,Normal NA NA boxplot HSP90AA4P heat shock protein 90kDa alpha family class A member 4, pseudogene chr4 189472965 189475192 + 2228 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HSP90AA4P NA 0.012 60-70% Testis 4.906892038 Breast_cancer,Normal NA NA boxplot RP11-488L18.8 NA chr1 247210691 247241823 - 31133 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-488L18.8 NA 0.518 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-416A14.1 NA chr1 39206512 39206957 + 446 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-416A14.1 NA 0.024 80-90% NA NA Normal NA NA boxplot CTB-63M22.1 NA chr5 166382305 166382599 + 295 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTB-63M22.1 NA 0.929 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down) NA boxplot TRBV25OR9-2 T cell receptor beta variable 25/OR9-2 (pseudogene) chr9 33662166 33662663 + 498 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TRBV25OR9-2 NA 0.071 70-80% Testis 4.906892038 Breast_cancer,CRC,HCC,Normal NA NA boxplot LINC-PINT long intergenic non-protein coding RNA, p53 induced transcript chr7 130941760 131110176 - 168417 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC-PINT exo_circ_042394,exo_circ_004240,exo_circ_002689 0.965 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD PAAD(up) NA boxplot CTD-2125J1.1 NA chr15 34651135 34655764 - 4630 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2125J1.1 NA 0.012 90-100% Testis 4.906892038 NA NA NA boxplot LINC00640 long intergenic non-protein coding RNA 640 chr14 51333393 51365557 + 32165 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00640 NA 0.118 10-20% Skin 1.731074196 CHD,CRC,HCC,Normal CHD(up) NA boxplot RP11-119F7.5 NA chr10 68698500 68700794 + 2295 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-119F7.5 NA 0.376 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot TUG1 taurine up-regulated 1 (non-protein coding) chr22 30970677 30979395 + 8719 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TUG1 exo_circ_005758,exo_circ_042954 1 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA Yes boxplot RP11-439L18.2 NA chr6 142946047 142956698 - 10652 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-439L18.2 NA 0.659 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CTD-2591A6.2 NA chr14 28318141 28418612 + 100472 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2591A6.2 NA 0.047 60-70% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot CTD-3051D23.4 NA chr14 104857792 104858836 - 1045 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-3051D23.4 NA 0.012 40-50% NA NA PAAD NA NA boxplot RP1-172N19.5 NA chrX 72777608 72779097 + 1490 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-172N19.5 NA 0.141 80-90% NA NA CRC,HCC,Normal,PAAD NA NA boxplot LINC00539 long intergenic non-protein coding RNA 539 chr13 21303515 21348721 - 45207 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00539 NA 0.6 20-30% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot CERS3-AS1 CERS3 antisense RNA 1 chr15 100372939 100437914 + 64976 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CERS3-AS1 NA 0.012 20-30% NA NA HCC NA NA boxplot RPS3AP25 ribosomal protein S3a pseudogene 25 chr7 94695027 94695819 - 793 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPS3AP25 NA 0.435 90-100% NA NA CRC,HCC,Normal,PAAD NA NA boxplot TATDN2P2 TatD DNase domain containing 2 pseudogene 2 chr6 158609706 158621636 - 11931 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TATDN2P2 NA 0.224 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC079807.4 NA chr2 47941696 48240983 - 299288 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC079807.4 NA 0.647 10-20% Testis 3.457955055 Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot FZD10-AS1 FZD10 antisense RNA 1 (head to head) chr12 130144315 130162256 - 17942 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FZD10-AS1 NA 0.2 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD PAAD(up) NA boxplot FMR1-IT1 FMR1 intronic transcript 1 chrX 147946941 147947583 + 643 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FMR1-IT1 NA 0.047 40-50% NA NA CRC,Normal NA NA boxplot RP1-151B14.6 NA chr22 37166757 37182850 + 16094 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-151B14.6 NA 0.094 50-60% Testis 2.660528511 Breast_cancer,CRC,Normal,PAAD NA NA boxplot AC092155.1 NA chr2 62532583 62533059 - 477 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC092155.1 NA 0.553 70-80% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-104N10.1 NA chr16 89492017 89504460 - 12444 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-104N10.1 exo_circ_034530 0.094 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-298I3.4 NA chr14 22982698 22999078 + 16381 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-298I3.4 NA 0.247 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CYP21A1P cytochrome P450 family 21 subfamily A member 1, pseudogene chr6 32005636 32008451 + 2816 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CYP21A1P NA 0.071 70-80% Adrenal Gland 2.870430017 Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot MTCO1P23 MT-CO1 pseudogene 23 chr10 69591406 69592931 - 1526 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MTCO1P23 NA 0.012 40-50% NA NA Normal NA NA boxplot RABGAP1L-IT1 RABGAP1L intronic transcript 1 chr1 174896958 174897996 + 1039 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RABGAP1L-IT1 NA 0.118 60-70% Fallopian Tube 4.906892038 Breast_cancer,CRC,Normal NA NA boxplot RP11-54I5.1 NA chrX 55961208 55962482 + 1275 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-54I5.1 NA 0.118 70-80% NA NA CRC,HCC,Normal NA NA boxplot RP11-22P6.2 NA chr16 28862166 28863340 - 1175 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-22P6.2 NA 0.035 80-90% NA NA Breast_cancer,Normal NA NA boxplot RP11-419L20.2 NA chr8 109470131 109471117 + 987 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-419L20.2 NA 0.035 70-80% Thyroid 2.500416988 CRC,PAAD NA NA boxplot RP11-430H10.1 NA chr11 45355371 45366121 + 10751 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-430H10.1 NA 0.153 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-37C7.3 NA chr15 39782571 39785617 + 3047 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-37C7.3 NA 0.118 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-354O24.1 NA chr4 91887886 91904335 + 16450 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-354O24.1 NA 0.012 90-100% NA NA NA NA NA boxplot RP3-425P12.4 NA chr6 25140003 25141403 + 1401 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-425P12.4 NA 0.894 10-20% NA NA CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-297K8.2 NA chr1 161153760 161159349 - 5590 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-297K8.2 NA 0.341 60-70% Testis 4.906892038 CRC,HCC,Normal,PAAD NA NA boxplot TUBB2BP1 tubulin beta 2B class IIb pseudogene 1 chr6 3177044 3179764 - 2721 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TUBB2BP1 exo_circ_026485 0.153 70-80% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot RPL34P18 ribosomal protein L34 pseudogene 18 chr8 93957338 93957691 - 354 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL34P18 NA 0.847 60-70% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-295M18.6 NA chr1 220828676 220829211 - 536 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-295M18.6 NA 0.024 10-20% NA NA HCC,PAAD NA NA boxplot RP11-418J17.1 NA chr1 119140396 119275973 + 135578 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-418J17.1 NA 0.882 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),PAAD(up) NA boxplot CTC-436K13.2 NA chr5 158275711 158278813 + 3103 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-436K13.2 NA 0.012 10-20% NA NA HCC NA NA boxplot RP11-131L12.2 NA chr12 118375350 118376275 - 926 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-131L12.2 NA 0.024 80-90% Testis 1.082052207 CRC,Normal NA NA boxplot RPS4XP5 ribosomal protein S4X pseudogene 5 chr2 63642455 63644038 - 1584 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPS4XP5 NA 0.094 50-60% NA NA CRC,HCC,Normal NA NA boxplot RP11-435F17.3 NA chr3 113885298 113886031 + 734 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-435F17.3 NA 0.306 80-90% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-428J1.4 NA chr6 5031756 5054423 - 22668 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-428J1.4 NA 0.706 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD HCC(up) NA boxplot RP11-852E15.1 NA chr3 45883640 45884113 - 474 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-852E15.1 NA 0.012 90-100% Brain 4.906892038 Breast_cancer NA NA boxplot RP11-260M2.1 NA chr2 210028417 210029156 + 740 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-260M2.1 NA 0.212 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CTD-2292P10.2 NA chr8 142727283 142727690 - 408 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2292P10.2 NA 0.012 60-70% NA NA HCC NA NA boxplot RP11-810P12.7 NA chr11 61967794 61969490 + 1697 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-810P12.7 NA 0.306 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-626G11.3 NA chr16 19119976 19121629 - 1654 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-626G11.3 NA 0.165 40-50% NA NA HCC,Normal,PAAD NA NA boxplot MTCO2P19 MT-CO2 pseudogene 19 chrX 102797531 102798128 + 598 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MTCO2P19 NA 0.035 30-40% NA NA HCC,PAAD NA NA boxplot RHOT1P1 ras homolog family member T1 pseudogene 1 chr18 14222008 14222331 + 324 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RHOT1P1 NA 0.953 0-10% Testis 1.230269184 CHD,CRC,HCC,Normal,PAAD PAAD(down) NA boxplot LINC01422 long intergenic non-protein coding RNA 1422 chr22 26903292 26920611 + 17320 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01422 exo_circ_005756 0.494 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CHMP1B2P charged multivesicular body protein 1B2, pseudogene chrX 80228489 80335364 - 106876 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CHMP1B2P NA 0.659 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up),HCC(up) NA boxplot RP11-134E15.2 NA chr14 32271857 32272301 - 445 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-134E15.2 NA 0.918 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(down),PAAD(down) NA boxplot RP11-558F24.2 NA chr1 9660828 9662626 - 1799 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-558F24.2 NA 0.012 70-80% NA NA Breast_cancer,Normal NA NA boxplot RP11-38J22.2 NA chr1 206160887 206161276 - 390 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-38J22.2 NA 0.2 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-387A1.6 NA chr2 176189919 176192538 - 2620 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-387A1.6 NA 0.024 40-50% NA NA Breast_cancer,Normal NA NA boxplot DARS-AS1 DARS antisense RNA 1 chr2 135985176 136022593 + 37418 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DARS-AS1 NA 0.471 40-50% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP4-622L5.7 NA chr1 32204769 32206814 - 2046 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-622L5.7 NA 0.329 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot FLJ46284 uncharacterized LOC441369 chr8 92699742 92879502 - 179761 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FLJ46284 exo_circ_050276 0.082 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot HCG4P7 HLA complex group 4 pseudogene 7 chr6 29887294 29888268 - 975 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HCG4P7 NA 0.376 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot MTATP6P3 mitochondrially encoded ATP synthase 6 pseudogene 3 chr17 22529934 22530609 + 676 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MTATP6P3 NA 0.012 70-80% NA NA HCC NA NA boxplot RP3-323A16.1 NA chr22 35160947 35215025 + 54079 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-323A16.1 NA 0.059 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-100N20.1 NA chr4 81164940 81193395 + 28456 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-100N20.1 NA 0.012 80-90% Testis 4.906892038 Breast_cancer NA NA boxplot RP11-342D11.2 NA chr10 33211277 33213804 + 2528 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-342D11.2 NA 0.235 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot AC091133.1 NA chr17 48931791 48937100 + 5310 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC091133.1 NA 0.588 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-963H4.3 NA chr17 10849541 10880895 + 31355 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-963H4.3 NA 0.141 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-74M11.2 NA chr4 11740948 11769468 - 28521 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-74M11.2 NA 0.012 30-40% NA NA Normal NA NA boxplot RP11-1280N14.3 NA chr5 71102898 71128753 - 25856 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1280N14.3 NA 0.859 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(up),HCC(up),PAAD(up) NA boxplot RP11-531F16.3 NA chr3 182950783 182956307 - 5525 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-531F16.3 NA 0.118 60-70% NA NA CRC,Normal,PAAD NA NA boxplot AC090945.1 NA chr3 15878047 15879571 + 1525 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC090945.1 NA 0.059 70-80% NA NA Breast_cancer,CRC,HCC,PAAD NA NA boxplot NDUFA6-AS1 NDUFA6 antisense RNA 1 (head to head) chr22 42090931 42137742 + 46812 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NDUFA6-AS1 NA 0.682 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-631M21.7 NA chr10 147820 148751 - 932 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-631M21.7 NA 0.012 0-10% NA NA Breast_cancer,HCC NA NA boxplot ANAPC1P1 anaphase promoting complex subunit 1 pseudogene 1 chr2 86861825 86922693 + 60869 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ANAPC1P1 NA 0.518 40-50% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot OR7E154P olfactory receptor family 7 subfamily E member 154 pseudogene chr8 7705182 7706113 - 932 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=OR7E154P NA 0.012 90-100% NA NA CRC NA NA boxplot MYCNOS MYCN opposite strand chr2 15921037 15942249 - 21213 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MYCNOS NA 0.353 60-70% Testis 2.808471704 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RFESDP1 Rieske (Fe-S) domain containing pseudogene 1 chr13 22850101 22850561 + 461 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RFESDP1 NA 0.306 10-20% Testis 4.906892038 CHD,CRC,HCC,Normal,PAAD CHD(up) NA boxplot HMGB3P12 high mobility group box 3 pseudogene 12 chr3 26216322 26216877 + 556 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HMGB3P12 NA 0.035 20-30% Testis 4.906892038 CHD,CRC,Normal NA NA boxplot LINC01322 long intergenic non-protein coding RNA 1322 chr3 165206960 165655423 + 448464 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01322 NA 0.047 80-90% NA NA Breast_cancer,Normal,PAAD NA NA boxplot AC015849.13 NA chr17 35818399 35823713 + 5315 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC015849.13 NA 0.012 70-80% NA NA NA NA NA boxplot CASP16P caspase 16, pseudogene chr16 3144219 3149963 + 5745 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CASP16P NA 0.059 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-81H14.1 NA chr12 68426331 68427737 - 1407 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-81H14.1 exo_circ_034175 0.235 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-459I19.1 NA chr2 218818690 218819144 + 455 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-459I19.1 NA 0.071 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CTD-2292P10.4 NA chr8 142702252 142726973 - 24722 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2292P10.4 NA 0.106 50-60% Testis 1.879092648 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-531H8.2 NA chr11 15571819 15622403 - 50585 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-531H8.2 NA 0.341 30-40% Whole Blood 3.594205274 CRC,HCC,Normal,PAAD NA NA boxplot AC092415.1 NA chr3 27997210 28028604 - 31395 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC092415.1 exo_circ_033039 0.094 0-10% NA NA HCC,Normal,PAAD NA NA boxplot RP11-18H21.3 NA chr4 152207421 152225870 - 18450 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-18H21.3 exo_circ_054506 0.071 30-40% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot GS1-5L10.1 NA chr8 91975908 91977418 + 1511 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GS1-5L10.1 NA 0.024 20-30% Nerve 1.205308672 HCC NA NA boxplot LL0XNC01-240C2.1 NA chrX 104062542 104063037 - 496 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LL0XNC01-240C2.1 NA 0.024 20-30% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot PKMP3 pyruvate kinase, muscle pseudogene 3 chr6 85659892 85660606 - 715 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PKMP3 NA 0.129 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CTB-83J4.1 NA chr19 54224523 54224881 + 359 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTB-83J4.1 NA 0.035 50-60% NA NA CRC,HCC,Normal NA NA boxplot CTC-329H14.1 NA chr5 108784098 108785552 + 1455 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-329H14.1 NA 0.047 10-20% NA NA Breast_cancer,Normal,PAAD NA NA boxplot CTD-2062F14.2 NA chr14 100480952 100481274 + 323 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2062F14.2 NA 0.012 20-30% NA NA Breast_cancer,CRC,HCC NA NA boxplot RP11-74C13.4 NA chr1 204131062 204131966 + 905 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-74C13.4 NA 0.082 70-80% NA NA HCC,Normal NA NA boxplot NIFKP3 nucleolar protein interacting with the FHA domain of MKI67 pseudogene 3 chr12 7604350 7605214 - 865 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NIFKP3 NA 0.247 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot NOP14-AS1 NOP14 antisense RNA 1 chr4 2934899 2961738 + 26840 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NOP14-AS1 NA 0.976 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-665C16.9 NA chr14 55229217 55229681 + 465 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-665C16.9 NA 0.929 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-457M11.7 NA chr6 26602733 26606661 + 3929 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-457M11.7 NA 0.118 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-57H14.2 NA chr10 112950646 112951875 - 1230 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-57H14.2 NA 0.235 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot ARHGEF26-AS1 ARHGEF26 antisense RNA 1 chr3 154024401 154121332 - 96932 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ARHGEF26-AS1 NA 0.259 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP13-270P17.2 NA chr18 3190397 3247277 + 56881 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP13-270P17.2 NA 0.588 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot XXyac-YM21GA2.4 NA chr9 87864166 87866290 + 2125 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=XXyac-YM21GA2.4 NA 0.035 10-20% Testis 2.853256541 Normal NA NA boxplot RP11-536K17.1 NA chr8 116402543 116403757 - 1215 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-536K17.1 NA 0.012 10-20% NA NA NA NA NA boxplot SEC11B SEC11 homolog B, signal peptidase complex subunit (pseudogene) chr8 54522799 54523297 - 499 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SEC11B NA 0.012 80-90% NA NA Breast_cancer,PAAD NA NA boxplot WASIR1 WASH and IL9R antisense RNA 1 chrY 57201143 57203357 - 2215 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=WASIR1 NA 0.082 60-70% Ovary 3.43812782 CRC,HCC,PAAD NA NA boxplot AP000472.2 NA chr21 22008944 22098459 - 89516 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AP000472.2 NA 0.059 10-20% NA NA Breast_cancer,HCC,PAAD NA NA boxplot NOVA1-AS1 NOVA1 antisense RNA 1 (head to head) chr14 26598412 26806467 + 208056 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NOVA1-AS1 NA 0.024 30-40% Testis 4.395623692 Breast_cancer,PAAD NA NA boxplot ARMC10P1 armadillo repeat containing 10 pseudogene 1 chr3 94506766 94507620 - 855 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ARMC10P1 NA 0.447 50-60% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up) NA boxplot LINC01138 long intergenic non-protein coding RNA 1138 chr1 148362995 148460150 - 97156 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01138 NA 0.953 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot AC009410.1 NA chr2 228483261 228611395 - 128135 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC009410.1 NA 0.024 60-70% Adrenal Gland 4.586631206 HCC,Normal NA NA boxplot RP11-97O12.7 NA chr15 88459717 88511521 - 51805 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-97O12.7 NA 0.788 20-30% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(down),PAAD(down) NA boxplot RP11-1084E5.1 NA chr8 108895029 109063417 - 168389 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1084E5.1 NA 0.341 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-736E3.3 NA chr7 113075124 113077181 - 2058 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-736E3.3 NA 0.012 60-70% NA NA CRC NA NA boxplot RP11-353N4.6 NA chr1 149607765 149612402 + 4638 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-353N4.6 NA 0.541 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-582J16.5 NA chr8 22613908 22616657 - 2750 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-582J16.5 NA 0.812 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot HNRNPA1P38 heterogeneous nuclear ribonucleoprotein A1pseudogene 38 chr8 141459075 141460031 + 957 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HNRNPA1P38 NA 0.024 40-50% Testis 3.036496456 PAAD NA NA boxplot AP000254.8 NA chr21 31666728 31667247 - 520 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AP000254.8 NA 0.224 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot AC011330.5 NA chr15 43663654 43684339 - 20686 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC011330.5 NA 0.847 20-30% NA NA CRC,HCC,Normal,PAAD HCC(up) NA boxplot LINC00824 long intergenic non-protein coding RNA 824 chr8 128405269 128564679 - 159411 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00824 NA 0.212 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC007204.2 NA chr19 19900968 19963464 + 62497 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC007204.2 NA 0.106 90-100% Thyroid 4.086335678 Breast_cancer,HCC,Normal NA NA boxplot RP11-547M24.1 NA chr2 64208498 64208716 - 219 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-547M24.1 NA 0.024 90-100% NA NA Breast_cancer,CRC,Normal NA NA boxplot LINC01364 long intergenic non-protein coding RNA 1364 chr1 87353524 87371655 - 18132 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01364 NA 0.012 10-20% NA NA Breast_cancer,Normal NA NA boxplot RP11-373J21.1 NA chr4 72323028 72330751 + 7724 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-373J21.1 NA 0.012 90-100% NA NA HCC NA NA boxplot LINC00884 long intergenic non-protein coding RNA 884 chr3 194487454 194518279 + 30826 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00884 NA 0.271 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC007040.8 NA chr2 71002531 71064743 - 62213 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC007040.8 NA 0.059 20-30% Testis 4.906892038 HCC,Normal,PAAD NA NA boxplot AC007562.1 NA chrY 25512301 25527786 - 15486 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC007562.1 NA 0.012 80-90% NA NA HCC NA NA boxplot CTD-2650P22.1 NA chr15 52010999 52019095 - 8097 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2650P22.1 NA 0.059 80-90% Testis 2.304136758 CRC,HCC,Normal NA NA boxplot CTC-338M12.13 NA chr5 181291673 181295572 + 3900 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-338M12.13 NA 0.294 70-80% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-356B19.11 NA chr9 127366770 127367397 + 628 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-356B19.11 NA 0.071 60-70% NA NA CRC,Normal,PAAD NA NA boxplot RP1-197B17.7 NA chr12 47728151 47730598 - 2448 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-197B17.7 NA 0.129 30-40% NA NA Breast_cancer,CRC,Normal,PAAD NA NA boxplot RP11-62F24.2 NA chr9 16726814 16727524 + 711 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-62F24.2 NA 0.059 20-30% NA NA Breast_cancer,CRC,Normal,PAAD NA NA boxplot NDUFS5P1 NADH:ubiquinone oxidoreductase subunit S5 pseudogene 1 chr6 136475862 136476150 - 289 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NDUFS5P1 NA 0.047 30-40% NA NA CRC,PAAD NA NA boxplot CTB-186G2.4 NA chr19 38683873 38693606 - 9734 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTB-186G2.4 NA 0.082 40-50% Testis 4.906892038 CRC,Normal NA NA boxplot RP11-672A2.6 NA chr11 76625462 76626834 - 1373 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-672A2.6 NA 0.294 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot PGAM1P6 phosphoglycerate mutase 1 pseudogene 6 chr2 23872268 23873014 - 747 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PGAM1P6 NA 0.035 70-80% NA NA Breast_cancer,CRC NA NA boxplot LINC01435 long intergenic non-protein coding RNA 1435 chr10 107694973 108197849 - 502877 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01435 NA 0.024 30-40% NA NA HCC NA NA boxplot AC123023.1 NA chr3 34203244 34268811 + 65568 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC123023.1 NA 0.129 30-40% Testis 3.782683592 CRC,HCC,Normal,PAAD NA NA boxplot DACT3-AS1 DACT3 antisense RNA 1 chr19 46660364 46677447 + 17084 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DACT3-AS1 NA 0.012 90-100% Testis 2.120782755 Breast_cancer,Normal NA NA boxplot CTD-3157E16.2 NA chr17 15789016 15789705 + 690 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-3157E16.2 NA 0.4 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP5-894A10.2 NA chr7 141652381 141656810 - 4430 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-894A10.2 NA 0.329 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-421N8.1 NA chr18 68277802 68278243 - 442 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-421N8.1 NA 0.894 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-291B21.2 NA chr12 10553363 10558049 + 4687 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-291B21.2 NA 0.929 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-502I4.3 NA chr15 67541072 67542604 - 1533 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-502I4.3 NA 0.318 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP4-647C14.2 NA chr14 73242651 73245979 - 3329 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-647C14.2 NA 0.718 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot RP4-536B24.3 NA chr16 87780134 87806476 - 26343 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-536B24.3 NA 0.012 30-40% Testis 4.906892038 Breast_cancer NA NA boxplot ISCA1P6 iron-sulfur cluster assembly 1 pseudogene 6 chr2 128518788 128519177 - 390 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ISCA1P6 NA 0.918 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up),CRC(up),HCC(up),PAAD(up) NA boxplot RP5-867C24.4 NA chr17 47161075 47162064 - 990 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-867C24.4 NA 0.059 70-80% NA NA CRC,Normal NA NA boxplot PTPN2P2 protein tyrosine phosphatase, non-receptor type 2 pseudogene 2 chr13 30553670 30554693 + 1024 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PTPN2P2 NA 0.024 80-90% NA NA Normal NA NA boxplot AC002044.1 NA chr16 73015047 73016016 - 970 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC002044.1 NA 0.047 50-60% NA NA Breast_cancer,CRC,Normal NA NA boxplot RP11-295G24.5 NA chr9 132768965 132770212 - 1248 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-295G24.5 NA 0.035 80-90% NA NA Breast_cancer,CRC NA NA boxplot OR7E100P olfactory receptor family 7 subfamily E member 100 pseudogene chr3 112524187 112525201 - 1015 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=OR7E100P NA 0.035 50-60% NA NA HCC,Normal,PAAD NA NA boxplot OR52T1P olfactory receptor family 52 subfamily T member 1 pseudogene chr11 5566678 5567616 - 939 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=OR52T1P NA 0.024 60-70% Ovary 4.906892038 CRC,Normal NA NA boxplot AC007228.5 NA chr19 56672268 56684653 + 12386 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC007228.5 NA 0.012 20-30% NA NA CRC NA NA boxplot RP11-1109M24.5 NA chr17 22266425 22288133 + 21709 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1109M24.5 NA 0.176 50-60% Testis 4.799251611 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC137675.1 NA chr3 27525353 27525394 + 42 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC137675.1 NA 0.012 90-100% NA NA NA NA NA boxplot AC011558.5 NA chr19 1038727 1039064 - 338 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC011558.5 NA 0.412 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot AC108868.3 NA chr2 106470799 106477669 - 6871 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC108868.3 NA 0.106 70-80% Pituitary 4.51555571 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC016722.3 NA chr2 46852020 46853496 - 1477 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC016722.3 NA 0.024 60-70% NA NA HCC,Normal NA NA boxplot RP11-803B1.2 NA chr3 75384059 75391810 - 7752 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-803B1.2 NA 0.012 30-40% NA NA CRC NA NA boxplot RP11-22L13.1 NA chr1 3306636 3310096 - 3461 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-22L13.1 NA 0.012 20-30% NA NA Breast_cancer,HCC NA NA boxplot RP11-332H17.1 NA chr1 170024077 170024683 + 607 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-332H17.1 NA 0.094 60-70% Testis 4.906892038 CRC,HCC,Normal NA NA boxplot PTBP1P polypyrimidine tract binding protein 1 pseudogene chr14 65279267 65281166 + 1900 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PTBP1P NA 0.082 70-80% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-883G14.1 NA chr16 50884209 50901061 + 16853 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-883G14.1 NA 0.012 90-100% NA NA Breast_cancer,CRC,HCC NA NA boxplot RP11-262H14.11 NA chr9 62888535 62889921 + 1387 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-262H14.11 NA 0.047 30-40% NA NA CRC,HCC NA NA boxplot RAB9BP1 RAB9B, member RAS oncogene family pseudogene 1 chr5 105099473 105100098 + 626 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RAB9BP1 NA 0.012 20-30% NA NA HCC NA NA boxplot RP11-427M20.1 NA chr4 133871246 134010690 - 139445 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-427M20.1 NA 0.259 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-571L19.8 NA chr4 99067256 99068125 - 870 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-571L19.8 NA 0.188 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP5-874C20.7 NA chr6 28315613 28315883 - 271 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-874C20.7 NA 0.012 0-10% NA NA CRC NA NA boxplot SNRPCP9 small nuclear ribonucleoprotein polypeptide C pseudogene 9 chr7 97885868 97886074 + 207 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SNRPCP9 NA 0.047 90-100% NA NA Breast_cancer,Normal,PAAD NA NA boxplot HIST1H2BPS2 histone cluster 1, H2b, pseudogene 2 chr6 27864062 27864401 - 340 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HIST1H2BPS2 NA 0.188 60-70% Testis 4.906892038 Breast_cancer,CRC,HCC,Normal NA NA boxplot AKR7L aldo-keto reductase family 7-like (gene/pseudogene) chr1 19265982 19274194 - 8213 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AKR7L NA 0.165 70-80% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC011343.1 NA chr5 159776772 159871384 - 94613 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC011343.1 NA 0.035 60-70% NA NA Breast_cancer,CRC,HCC,PAAD NA NA boxplot CNN2P9 calponin 2 pseudogene 9 chr6 110858239 110859147 + 909 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CNN2P9 NA 0.318 30-40% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-1029J19.4 NA chr14 101628984 101632530 - 3547 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1029J19.4 NA 0.024 50-60% NA NA Breast_cancer,HCC NA NA boxplot CTC-260E6.6 NA chr19 20125377 20321305 - 195929 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-260E6.6 NA 0.647 10-20% Thyroid 1.162558086 Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),HCC(down),PAAD(down) NA boxplot RPL12P21 ribosomal protein L12 pseudogene 21 chr5 139035148 139035987 - 840 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL12P21 NA 0.024 70-80% NA NA CRC NA NA boxplot RP1-300G12.2 NA chr6 81527102 81534915 - 7814 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-300G12.2 NA 0.082 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP1-207H1.3 NA chr6 38923029 38953099 - 30071 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-207H1.3 NA 0.012 90-100% Testis 4.521737557 Breast_cancer,HCC NA NA boxplot RP11-168O16.2 NA chr1 201031136 201043073 + 11938 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-168O16.2 NA 0.012 30-40% Testis 4.257801436 Breast_cancer,HCC NA NA boxplot AC005154.6 NA chr7 30516309 30594809 - 78501 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC005154.6 exo_circ_042413,exo_circ_020901,exo_circ_042414,exo_circ_000713 0.929 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-575I8.1 NA chr9 27829276 27844481 + 15206 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-575I8.1 NA 0.012 90-100% Testis 3.461817705 Normal NA NA boxplot RP11-622A1.2 NA chr4 73508803 73534128 + 25326 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-622A1.2 NA 0.012 30-40% Liver 4.832531665 Breast_cancer,CRC NA NA boxplot RP1-244F24.1 NA chr6 45421079 45422005 - 927 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-244F24.1 NA 0.094 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-10N16.3 NA chr1 24307556 24321901 - 14346 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-10N16.3 NA 0.024 30-40% Testis 2.199851914 Breast_cancer,HCC,PAAD NA NA boxplot RP11-687D19.1 NA chr18 38655209 38687998 - 32790 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-687D19.1 NA 0.012 80-90% Testis 4.906892038 Normal NA NA boxplot RP11-757F18.3 NA chr3 112185480 112185998 - 519 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-757F18.3 NA 0.012 90-100% NA NA Breast_cancer,PAAD NA NA boxplot CTD-2523D13.2 NA chr11 119729583 119739623 + 10041 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2523D13.2 NA 0.035 40-50% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot GS1-410F4.5 NA chr12 67978107 67978387 - 281 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GS1-410F4.5 NA 0.012 90-100% NA NA Normal NA NA boxplot CIR1P1 corepressor interacting with RBPJ, 1 pseudogene 1 chr5 154559308 154560440 - 1133 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CIR1P1 NA 0.012 10-20% NA NA PAAD NA NA boxplot CTD-2161E19.1 NA chr5 86884231 86884881 - 651 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2161E19.1 NA 0.165 90-100% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot LINC01106 long intergenic non-protein coding RNA 1106 chr2 110375138 110384442 - 9305 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01106 NA 0.718 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up),HCC(up) NA boxplot RP11-728E14.2 NA chr17 21457434 21458989 + 1556 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-728E14.2 NA 0.353 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-49C9.2 NA chrX 150114378 150116520 + 2143 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-49C9.2 NA 0.318 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-65G9.1 NA chrY 21038289 21044724 - 6436 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-65G9.1 NA 0.082 20-30% NA NA HCC,Normal,PAAD NA NA boxplot RP4-584D14.7 NA chr7 150341771 150342607 + 837 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-584D14.7 NA 0.035 80-90% NA NA Breast_cancer,CRC,Normal NA NA boxplot RP11-96D1.8 NA chr16 68290087 68292790 - 2704 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-96D1.8 NA 0.188 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot HK2P1 hexokinase 2 pseudogene 1 chrX 80571871 80574607 - 2737 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HK2P1 NA 0.282 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-390F4.10 NA chr9 6704471 6707780 + 3310 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-390F4.10 NA 0.012 60-70% Testis 4.106174458 NA NA NA boxplot KRT18P26 keratin 18 pseudogene 26 chr2 74306728 74308008 - 1281 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KRT18P26 NA 0.012 90-100% Testis 4.906892038 CRC NA NA boxplot RP11-145A3.4 NA chr1 225803148 225803448 + 301 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-145A3.4 NA 0.024 70-80% NA NA Breast_cancer,Normal NA NA boxplot RP11-104H15.10 NA chr17 7439506 7445966 + 6461 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-104H15.10 exo_circ_017265 0.482 70-80% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot LINC00963 long intergenic non-protein coding RNA 963 chr9 129483451 129513686 + 30236 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00963 NA 0.988 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down),PAAD(up) NA boxplot RP11-419I17.2 NA chr8 12476462 12477122 + 661 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-419I17.2 NA 0.059 60-70% NA NA CRC,Normal,PAAD NA NA boxplot RPL22P19 ribosomal protein L22 pseudogene 19 chr12 124935455 124935895 - 441 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL22P19 NA 0.024 80-90% NA NA HCC,Normal NA NA boxplot NCBP2-AS1 NCBP2 antisense RNA 1 chr3 196939877 196942534 + 2658 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NCBP2-AS1 NA 0.235 70-80% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RPL12P25 ribosomal protein L12 pseudogene 25 chr9 477750 478423 + 674 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL12P25 NA 0.071 50-60% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot XXbac-B135H6.18 NA chr22 20981361 20981755 - 395 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=XXbac-B135H6.18 NA 0.082 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot GOLGA2P6 golgin A2 pseudogene 6 chr10 30364410 30374386 - 9977 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GOLGA2P6 NA 0.012 0-10% Testis 4.906892038 Breast_cancer,Normal NA NA boxplot RPS26P11 ribosomal protein S26 pseudogene 11 chrX 72044545 72044892 + 348 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPS26P11 NA 0.976 0-10% NA NA CHD,CRC,HCC,Normal,PAAD CHD(up) NA boxplot TRPC2 transient receptor potential cation channel, subfamily C, member 2, pseudogene chr11 3609901 3637559 + 27659 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TRPC2 NA 0.8 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CRC(up),HCC(up),PAAD(up) NA boxplot LINC00345 long intergenic non-protein coding RNA 345 chr13 52484161 52484680 - 520 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00345 NA 0.047 0-10% Testis 4.906892038 Normal NA NA boxplot RP11-423E7.2 NA chr3 172301654 172303052 - 1399 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-423E7.2 NA 0.024 20-30% NA NA Breast_cancer,Normal NA NA boxplot RP11-434I12.5 NA chr8 73277364 73278046 - 683 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-434I12.5 NA 0.024 60-70% NA NA PAAD NA NA boxplot RP11-245D16.4 NA chr13 52454775 52455331 - 557 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-245D16.4 NA 0.318 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-571I18.4 NA chr4 53997415 53997712 - 298 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-571I18.4 NA 0.059 80-90% NA NA CRC,HCC NA NA boxplot CTD-2542C24.14 NA chr19 20674923 20696533 + 21611 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2542C24.14 NA 0.012 10-20% NA NA CRC NA NA boxplot AC007386.2 NA chr2 64901840 64905137 - 3298 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC007386.2 NA 0.212 30-40% Spleen 3.11563178 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot SLC10A5P1 SLC10A5 pseudogene 1 chr8 81634357 81635662 - 1306 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SLC10A5P1 NA 0.024 70-80% NA NA PAAD NA NA boxplot LINC00603 long intergenic non-protein coding RNA 603 chr5 39892138 40053324 + 161187 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00603 NA 0.012 90-100% NA NA Breast_cancer,Normal NA NA boxplot AC015969.3 NA chr2 68361214 68365584 - 4371 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC015969.3 NA 0.553 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down) NA boxplot RP11-434P11.2 NA chr2 73750256 73750786 - 531 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-434P11.2 NA 0.141 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-461L13.4 NA chr4 152308283 152309983 - 1701 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-461L13.4 NA 0.035 80-90% Testis 4.906892038 CRC NA NA boxplot RP11-459O16.9 NA chr9 42978851 42979918 + 1068 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-459O16.9 NA 0.035 40-50% NA NA CRC,HCC NA NA boxplot RP11-706O15.3 NA chrX 3853010 3882317 - 29308 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-706O15.3 NA 0.882 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(up),HCC(up),PAAD(up) NA boxplot RP11-44F14.5 NA chr16 53448748 53449590 + 843 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-44F14.5 NA 0.071 40-50% NA NA CRC,HCC,Normal NA NA boxplot RP11-443P15.2 NA chr3 185959943 185980872 + 20930 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-443P15.2 NA 0.129 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD PAAD(up) NA boxplot LINC00473 long intergenic non-protein coding RNA 473 chr6 165908802 165988048 - 79247 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00473 NA 0.094 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD PAAD(up) NA boxplot RP11-90D11.1 NA chr8 95505406 95527524 + 22119 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-90D11.1 NA 0.012 70-80% NA NA Breast_cancer,PAAD NA NA boxplot LINC01515 long intergenic non-protein coding RNA 1515 chr10 65570338 65768835 + 198498 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01515 exo_circ_056164,exo_circ_012689 0.706 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CRC(down),PAAD(up) NA boxplot AC004112.4 NA chr7 112328189 112409623 - 81435 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC004112.4 NA 0.012 20-30% Testis 4.326101826 Breast_cancer,Normal NA NA boxplot RP11-768F21.1 NA chr12 119387987 119668079 - 280093 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-768F21.1 NA 0.824 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot HNF1A-AS1 HNF1A antisense RNA 1 chr12 120941728 120980965 - 39238 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HNF1A-AS1 NA 0.059 10-20% Stomach 2.460340801 Breast_cancer,HCC,Normal,PAAD NA NA boxplot RP11-533F5.2 NA chr4 56760919 56761485 - 567 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-533F5.2 NA 0.059 80-90% Testis 4.906892038 HCC,Normal NA NA boxplot CHODL-AS1 CHODL antisense RNA 1 chr21 17835016 17885608 - 50593 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CHODL-AS1 NA 0.035 80-90% Skin 4.906892038 Normal NA NA boxplot RP11-728K20.1 NA chr7 149891191 149909704 - 18514 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-728K20.1 NA 0.635 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-886P16.10 NA chr19 8444570 8445597 - 1028 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-886P16.10 NA 0.259 70-80% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC009120.4 NA chr16 74054151 74296762 - 242612 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC009120.4 NA 0.071 60-70% Testis 3.80903592 Breast_cancer,HCC,Normal NA NA boxplot RP11-632F7.3 NA chr4 40812779 40826151 + 13373 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-632F7.3 NA 0.024 90-100% NA NA HCC,Normal NA NA boxplot LINC00894 long intergenic non-protein coding RNA 894 chrX 149938628 150224580 + 285953 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00894 NA 0.553 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CRC(up) NA boxplot RP11-535A5.1 NA chr18 22347846 22348252 - 407 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-535A5.1 NA 0.176 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-7F18.2 NA chr8 67343975 67345087 + 1113 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-7F18.2 NA 0.094 70-80% NA NA CRC,HCC,Normal NA NA boxplot LINC01020 long intergenic non-protein coding RNA 1020 chr5 5034359 5070004 + 35646 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01020 NA 0.012 10-20% Testis 4.38344633 Breast_cancer,HCC NA NA boxplot RP11-304C12.5 NA chr11 6323554 6324023 + 470 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-304C12.5 NA 0.035 70-80% NA NA HCC,PAAD NA NA boxplot THUMPD3P1 THUMP domain containing 3 pseudogene 1 chr7 40151613 40154151 + 2539 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=THUMPD3P1 NA 0.012 30-40% NA NA NA NA NA boxplot RP11-27I1.6 NA chr9 120812475 120812845 - 371 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-27I1.6 NA 0.071 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot HNRNPA3P6 heterogeneous nuclear ribonucleoprotein A3 pseudogene 6 chr3 75214631 75215636 + 1006 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HNRNPA3P6 NA 1 0-10% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot PMS2P6 PMS1 homolog 2, mismatch repair system component pseudogene 6 chr7 75316048 75327765 - 11718 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PMS2P6 NA 0.941 0-10% NA NA CHD,CRC,HCC,Normal,PAAD CHD(down),HCC(up) NA boxplot LINC01251 long intergenic non-protein coding RNA 1251 chr9 33732975 33738416 - 5442 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01251 NA 0.059 70-80% NA NA CRC,HCC,PAAD NA NA boxplot ANKRD26P2 ankyrin repeat domain 26 pseudogene 2 chr13 38922727 38936199 - 13473 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ANKRD26P2 NA 0.012 0-10% NA NA PAAD NA NA boxplot CTD-2201E9.4 NA chr5 9363275 9422481 + 59207 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2201E9.4 NA 0.035 50-60% Artery 4.906892038 CRC,PAAD NA NA boxplot RP11-561O23.5 NA chr9 68306528 68330626 + 24099 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-561O23.5 NA 0.047 40-50% Testis 4.789534233 Breast_cancer,PAAD NA NA boxplot RP11-17A4.3 NA chr8 56536758 56540497 - 3740 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-17A4.3 NA 0.035 80-90% Testis 4.768672916 Breast_cancer,CRC,HCC NA NA boxplot RP5-836N17.4 NA chr20 32116171 32116629 + 459 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-836N17.4 NA 0.071 40-50% NA NA CRC,Normal NA NA boxplot SLC25A6P5 solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6 pseudogene 5 chr9 105849710 105851425 + 1716 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SLC25A6P5 exo_circ_010545,exo_circ_055785 0.024 70-80% NA NA PAAD NA NA boxplot LINC00452 long intergenic non-protein coding RNA 452 chr13 113888306 113923512 + 35207 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00452 NA 0.024 50-60% Testis 3.344162059 Breast_cancer,Normal NA NA boxplot RP11-226P1.2 NA chr14 81727780 81743138 - 15359 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-226P1.2 NA 0.012 90-100% Testis 4.906892038 Normal NA NA boxplot HMGN2P6 high mobility group nucleosomal binding domain 2 pseudogene 6 chr14 25267064 25267336 - 273 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HMGN2P6 NA 0.224 30-40% Cervix 4.906892038 CHD,CRC,HCC,Normal,PAAD CHD(up) NA boxplot RP11-417O11.5 NA chr10 74005137 74027915 + 22779 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-417O11.5 NA 0.024 60-70% NA NA CRC NA NA boxplot RP11-317G22.2 NA chr4 48936582 48936880 + 299 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-317G22.2 NA 0.012 10-20% Brain 4.906892038 HCC NA NA boxplot MGC15885 uncharacterized protein MGC15885 chr15 62637172 62645291 - 8120 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MGC15885 NA 0.012 60-70% NA NA Breast_cancer,Normal NA NA boxplot RP11-1134I14.4 NA chr8 47189305 47189560 + 256 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1134I14.4 NA 0.035 20-30% NA NA Breast_cancer,HCC,PAAD NA NA boxplot RP11-241F15.1 NA chr4 49486926 49489554 - 2629 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-241F15.1 NA 0.247 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot C10orf25 chromosome 10 open reading frame 25 chr10 44997698 45000888 - 3191 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=C10orf25 NA 0.941 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up),HCC(up) NA boxplot RP11-420L9.2 NA chr6 3754099 3754840 + 742 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-420L9.2 NA 0.035 80-90% NA NA CRC,HCC NA NA boxplot AC131056.3 NA chr17 36183235 36196471 + 13237 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC131056.3 NA 0.812 10-20% Spleen 3.881854216 Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-549K20.1 NA chr5 25126305 25190656 - 64352 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-549K20.1 NA 0.059 90-100% Testis 4.906892038 Breast_cancer,Normal NA NA boxplot RP11-366M4.1 NA chr4 165012366 165012845 - 480 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-366M4.1 NA 0.588 80-90% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-63A1.1 NA chr17 46916770 46923034 - 6265 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-63A1.1 NA 0.024 70-80% Testis 3.658316965 CRC NA NA boxplot IPMKP1 inositol polyphosphate multikinase pseudogene 1 chr13 22837026 22837880 - 855 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=IPMKP1 NA 0.012 90-100% Testis 4.189082973 HCC NA NA boxplot AC007386.4 NA chr2 65030727 65053017 + 22291 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC007386.4 NA 0.376 20-30% Spleen 2.98881408 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-175P13.2 NA chr12 100143058 100144671 + 1614 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-175P13.2 NA 0.047 40-50% Testis 1.351597482 CRC,Normal NA NA boxplot RP11-510M2.2 NA chr16 71462278 71465941 + 3664 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-510M2.2 NA 0.071 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP4-742J24.2 NA chr20 11909404 11918677 - 9274 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-742J24.2 NA 0.129 70-80% NA NA CRC,HCC,Normal NA NA boxplot RP3-466P17.2 NA chr6 145736911 145737173 - 263 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-466P17.2 NA 0.024 70-80% NA NA HCC,Normal NA NA boxplot RP11-20B24.4 NA chr17 28897738 28899402 + 1665 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-20B24.4 NA 0.2 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CTD-2349P21.3 NA chr17 30738182 30740275 + 2094 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2349P21.3 NA 0.2 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC109309.4 NA chr11 3226061 3232838 + 6778 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC109309.4 NA 0.024 80-90% Cervix 1.748094538 Breast_cancer,HCC,Normal NA NA boxplot RP11-100F15.1 NA chr12 114077133 114079902 + 2770 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-100F15.1 NA 0.012 70-80% Testis 4.906892038 PAAD NA NA boxplot CTD-2105E13.15 NA chr19 55377579 55378125 - 547 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2105E13.15 NA 0.012 90-100% NA NA Breast_cancer,CRC,Normal NA NA boxplot RP4-784A16.1 NA chr1 53267935 53268601 + 667 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-784A16.1 NA 0.012 60-70% Testis 3.300924815 Breast_cancer,HCC NA NA boxplot RP11-307C12.12 NA chr1 154961825 154962623 + 799 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-307C12.12 NA 0.471 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC090286.2 NA chr17 18908279 18908865 + 587 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC090286.2 NA 0.141 30-40% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot RP11-382A20.1 NA chr15 83044368 83044771 + 404 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-382A20.1 NA 0.024 70-80% NA NA HCC NA NA boxplot AC116609.3 NA chr2 741977 749856 + 7880 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC116609.3 NA 0.012 80-90% Testis 4.698318591 NA NA NA boxplot ISCA1P2 iron-sulfur cluster assembly 1 pseudogene 2 chr1 229042171 229042591 + 421 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ISCA1P2 NA 0.012 90-100% NA NA Breast_cancer,HCC,Normal NA NA boxplot RP11-203E8.1 NA chr8 24169957 24177080 - 7124 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-203E8.1 NA 0.153 40-50% Small Intestine 3.576362831 CRC,HCC,Normal,PAAD NA NA boxplot RP11-705O24.3 NA chr8 61821481 61825252 - 3772 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-705O24.3 NA 0.012 90-100% Testis 4.906892038 Normal NA NA boxplot DANT2 DXZ4 associated non-coding transcript 2, distal chrX 115917271 115969089 - 51819 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DANT2 NA 0.035 0-10% NA NA PAAD NA NA boxplot ANKRD19P ankyrin repeat domain 19, pseudogene chr9 92809388 92888693 + 79306 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ANKRD19P NA 0.176 10-20% Testis 3.033310535 Breast_cancer,HCC,Normal,PAAD NA NA boxplot RP11-45A17.3 NA chr10 131996738 131999846 + 3109 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-45A17.3 NA 0.2 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot NPM1P26 nucleophosmin 1 (nucleolar phosphoprotein B23, numatrin) pseudogene 26 chr10 96560185 96560922 + 738 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NPM1P26 NA 0.024 40-50% NA NA Normal NA NA boxplot BRD2-IT1 BRD2 intronic transcript 1 chr6 32970232 32970886 + 655 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=BRD2-IT1 NA 0.035 30-40% NA NA HCC,Normal NA NA boxplot RP11-455B3.1 NA chr5 97881420 97922695 + 41276 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-455B3.1 exo_circ_004062 0.024 70-80% Testis 1.463389815 Normal,PAAD NA NA boxplot RP11-348H3.2 NA chr1 212824027 212824505 + 479 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-348H3.2 NA 0.024 80-90% NA NA Breast_cancer,Normal NA NA boxplot PRAMENP PRAME N-terminal-like, pseudogene chr22 21991099 22043934 - 52836 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PRAMENP NA 0.518 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-655C2.3 NA chr11 58497888 58505758 - 7871 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-655C2.3 NA 0.012 30-40% Testis 1.776793584 PAAD NA NA boxplot CCR12P chemokine (C-C motif) receptor 12, pseudogene chr13 99407781 99409062 - 1282 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CCR12P NA 0.376 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC073043.1 NA chr2 199867396 199911159 - 43764 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC073043.1 NA 0.071 60-70% Testis 4.094422301 Breast_cancer,CRC,Normal,PAAD NA NA boxplot RP11-266K4.14 NA chr12 8217758 8221115 + 3358 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-266K4.14 NA 0.118 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot TBC1D3P1-DHX40P1 TBC1D3P1-DHX40P1 readthrough transcribed pseudogene chr17 59962363 60018975 - 56613 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TBC1D3P1-DHX40P1 NA 0.8 20-30% Testis 4.906892038 Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down),PAAD(up) NA boxplot KCNIP4-IT1 KCNIP4 intronic transcript 1 chr4 21843341 21853188 - 9848 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KCNIP4-IT1 NA 0.035 30-40% NA NA Breast_cancer,HCC,PAAD NA NA boxplot RP5-1103B4.3 NA chr1 56963886 56996757 + 32872 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-1103B4.3 NA 0.012 70-80% Liver 4.906892038 HCC NA NA boxplot RP11-104D21.2 NA chrX 51082818 51091228 + 8411 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-104D21.2 NA 0.012 90-100% NA NA Normal NA NA boxplot LL22NC03-102D1.18 uncharacterized LOC105372949 chr22 22692778 22693312 - 535 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LL22NC03-102D1.18 NA 0.012 70-80% Testis 3.907778346 Breast_cancer,PAAD NA NA boxplot KYNUP1 kynureninase pseudogene 1 chr17 19166896 19169668 - 2773 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KYNUP1 NA 0.012 90-100% NA NA CRC NA NA boxplot RP11-1020A11.2 NA chr3 9958717 9962539 + 3823 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1020A11.2 NA 0.376 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot MIATNB MIAT neighbor (non-protein coding) chr22 26672767 26780207 + 107441 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MIATNB exo_circ_029090,exo_circ_003005,exo_circ_029091 0.929 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down) NA boxplot ULK4P2 ULK4 pseudogene 2 chr15 30572738 30600647 + 27910 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ULK4P2 NA 0.412 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-704M14.1 NA chr4 69182100 69216766 + 34667 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-704M14.1 NA 0.212 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CTC-338M12.7 NA chr5 181224646 181230685 - 6040 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-338M12.7 NA 0.341 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot LINC01611 long intergenic non-protein coding RNA 1611 chr6 84421028 84556152 - 135125 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01611 NA 0.024 20-30% NA NA Breast_cancer,HCC NA NA boxplot RP11-755J8.1 NA chr20 30656033 30723932 - 67900 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-755J8.1 NA 0.576 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down) NA boxplot MT1XP1 metallothionein 1X pseudogene 1 chr1 16241213 16241398 - 186 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MT1XP1 NA 0.024 80-90% NA NA Breast_cancer,Normal NA NA boxplot RP11-34P13.8 NA chr1 89551 91105 - 1555 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-34P13.8 NA 0.106 80-90% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-574K11.32 NA chr10 73769264 73772862 - 3599 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-574K11.32 NA 0.847 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot RP11-400K9.4 NA chr8 53515171 53523931 - 8761 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-400K9.4 NA 0.306 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot ESRG embryonic stem cell related (non-protein coding) chr3 54632122 54639857 - 7736 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ESRG NA 0.247 30-40% Vagina 2.798113775 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-67L14.1 NA chr2 112840328 112844195 + 3868 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-67L14.1 NA 0.035 10-20% NA NA Breast_cancer,CRC,PAAD NA NA boxplot RP11-432I13.6 NA chr10 45187292 45198323 - 11032 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-432I13.6 exo_circ_045128 0.188 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot DHRS4-AS1 DHRS4 antisense RNA 1 chr14 23938731 23988839 - 50109 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DHRS4-AS1 NA 1 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot HIF1AP1 hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) pseudogene 1 chr14 75116426 75116600 - 175 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HIF1AP1 NA 0.012 80-90% NA NA NA NA NA boxplot RP11-44F14.4 NA chr16 53362019 53363678 - 1660 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-44F14.4 NA 0.012 80-90% NA NA CRC NA NA boxplot RP11-1151B14.5 NA chr18 58511598 58512310 - 713 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1151B14.5 NA 0.012 10-20% NA NA Breast_cancer,PAAD NA NA boxplot RP11-66B24.2 NA chr15 100849561 100861756 + 12196 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-66B24.2 NA 0.059 10-20% NA NA Breast_cancer,Normal,PAAD NA NA boxplot RP11-1069G10.2 NA chr15 62895812 62899543 + 3732 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1069G10.2 NA 0.024 40-50% NA NA Breast_cancer,CRC,Normal,PAAD NA NA boxplot LINC00328-2P long intergenic non-protein coding RNA 328-2, pseudogene chr13 18809830 18810048 + 219 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00328-2P NA 0.012 80-90% NA NA CHD NA NA boxplot RP11-451O13.1 NA chr1 157925065 157949071 + 24007 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-451O13.1 NA 0.012 70-80% Testis 4.524170185 Breast_cancer,HCC NA NA boxplot ADARB2-AS1 ADARB2 antisense RNA 1 chr10 1526637 1556984 + 30348 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ADARB2-AS1 NA 0.012 40-50% Brain 4.11496027 Breast_cancer,PAAD NA NA boxplot LINC01615 long intergenic non-protein coding RNA 1615 chr6 169158092 169162924 - 4833 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01615 NA 0.047 20-30% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot SNX18P4 sorting nexin 18 pseudogene 4 chr9 66082350 66083187 - 838 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SNX18P4 NA 0.024 80-90% Testis 4.906892038 Breast_cancer,CRC,Normal NA NA boxplot SIX3-AS1 SIX3 antisense RNA 1 chr2 44940154 44941873 - 1720 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SIX3-AS1 NA 0.012 20-30% Pituitary 3.639140276 Breast_cancer,HCC NA NA boxplot RP11-867G23.8 NA chr11 66347950 66364804 + 16855 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-867G23.8 NA 0.4 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot HMGN2P15 high mobility group nucleosomal binding domain 2 pseudogene 15 chr17 42753530 42753799 - 270 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HMGN2P15 NA 0.435 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-815J21.4 NA chr15 85619623 85670948 - 51326 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-815J21.4 NA 0.024 20-30% NA NA HCC,PAAD NA NA boxplot HCG4P11 HLA complex group 4 pseudogene 11 chr6 29722981 29723971 - 991 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HCG4P11 NA 0.435 40-50% Spleen 1.552958978 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot C22orf34 chromosome 22 open reading frame 34 chr22 49414524 49657542 - 243019 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=C22orf34 exo_circ_046560 0.859 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CRC(up),PAAD(up) NA boxplot LINC00412 long intergenic non-protein coding RNA 412 chr13 27236282 27236811 - 530 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00412 exo_circ_005059,exo_circ_051187 0.129 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-616M22.12 NA chr16 1223639 1224143 + 505 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-616M22.12 NA 0.012 90-100% NA NA Breast_cancer NA NA boxplot RP11-630C16.2 NA chr12 41829898 41932592 - 102695 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-630C16.2 NA 0.047 80-90% NA NA Breast_cancer,Normal,PAAD NA NA boxplot CHMP4BP1 charged multivesicular body protein 4B pseudogene 1 chr14 55298644 55299231 + 588 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CHMP4BP1 NA 0.282 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot FAM60CP family with sequence similarity 60, member C pseudogene chr18 60016778 60017441 - 664 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FAM60CP NA 0.859 40-50% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-575C1.1 NA chr3 137535572 137536142 - 571 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-575C1.1 NA 0.012 90-100% NA NA NA NA NA boxplot RP11-63E5.1 NA chr8 264315 264672 + 358 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-63E5.1 NA 0.012 90-100% Testis 4.011751626 CRC NA NA boxplot AC010150.1 NA chr2 25856461 25856966 - 506 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC010150.1 NA 0.153 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-8L18.3 NA chr10 34663859 34664101 - 243 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-8L18.3 NA 0.059 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot NIPA2P4 non imprinted in Prader-Willi/Angelman syndrome 2 pseudogene 4 chr8 81617220 81618560 - 1341 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NIPA2P4 NA 0.012 30-40% NA NA NA NA NA boxplot AC024084.1 NA chr7 136025761 136084668 + 58908 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC024084.1 NA 0.647 0-10% Testis 3.361226846 Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down) NA boxplot RP11-813I20.2 NA chr14 55748208 55773203 + 24996 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-813I20.2 NA 0.035 60-70% NA NA Breast_cancer,Normal NA NA boxplot CTD-2195B23.3 NA chr19 41221426 41222051 - 626 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2195B23.3 NA 0.024 90-100% NA NA Breast_cancer,HCC NA NA boxplot CALR4P calreticulin 4, pseudogene chr1 51561866 51594897 - 33032 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CALR4P NA 0.024 80-90% NA NA Breast_cancer,CHD,Normal NA NA boxplot RP11-20I20.1 NA chr4 1100016 1101558 - 1543 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-20I20.1 NA 0.035 50-60% NA NA Normal NA NA boxplot AP001056.1 NA chr21 44175489 44176453 + 965 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AP001056.1 NA 0.071 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-356M20.3 NA chr15 59348648 59359889 - 11242 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-356M20.3 NA 0.094 30-40% NA NA CRC,Normal,PAAD NA NA boxplot PABPC1P7 poly(A) binding protein, cytoplasmic 1 pseudogene 7 chr4 102896725 102898237 + 1513 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PABPC1P7 NA 0.012 30-40% NA NA Normal NA NA boxplot CSNK1G2P1 casein kinase 1, gamma 2 pseudogene 1 chr9 5040945 5041940 + 996 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CSNK1G2P1 NA 0.118 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot LA16c-13E4.3 NA chr22 15290718 15297196 + 6479 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LA16c-13E4.3 NA 0.024 0-10% NA NA Breast_cancer,PAAD NA NA boxplot RFX3-AS1 RFX3 antisense RNA 1 chr9 3526723 3691814 + 165092 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RFX3-AS1 exo_circ_015250,exo_circ_004532,exo_circ_013922,exo_circ_022392 0.882 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down) NA boxplot CTD-2035E11.5 NA chr5 43061395 43062441 + 1047 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2035E11.5 NA 0.118 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RPS2P46 ribosomal protein S2 pseudogene 46 chr17 19445970 19446852 - 883 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPS2P46 NA 1 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot AP003068.23 NA chr11 65177606 65181834 - 4229 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AP003068.23 NA 0.929 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-73E17.3 NA chr14 34920865 34921006 + 142 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-73E17.3 NA 0.047 40-50% NA NA Normal NA NA boxplot AC083949.1 NA chr2 42143238 42170301 - 27064 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC083949.1 exo_circ_032843,exo_circ_036902 0.8 0-10% Spleen 3.563987847 CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down) NA boxplot RP11-887P2.6 NA chr12 93836167 93838038 + 1872 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-887P2.6 exo_circ_028477 0.094 70-80% NA NA CRC,HCC,Normal NA NA boxplot ATP6V0E1P2 ATPase, H+ transporting, lysosomal 9kDa, V0 subunit e1 pseudogene 2 chr3 41859350 41859594 - 245 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ATP6V0E1P2 NA 0.024 50-60% NA NA PAAD NA NA boxplot RP11-216B9.8 NA chr9 128595893 128596633 + 741 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-216B9.8 NA 0.035 80-90% NA NA CRC,PAAD NA NA boxplot RP11-56B16.6 NA chr15 51833134 51833426 + 293 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-56B16.6 NA 0.035 90-100% NA NA CRC,PAAD NA NA boxplot TTTY7 testis-specific transcript, Y-linked 7 (non-protein coding) chrY 6449468 6457906 + 8439 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TTTY7 NA 0.012 60-70% NA NA Normal NA NA boxplot ZBTB45P2 zinc finger and BTB domain containing 45 pseudogene 2 chr2 110383112 110384642 + 1531 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ZBTB45P2 NA 0.012 80-90% NA NA HCC NA NA boxplot CTD-2015G9.2 NA chr16 86722091 86741059 + 18969 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2015G9.2 NA 0.094 30-40% Salivary Gland 2.395298312 Breast_cancer,CRC,HCC,PAAD NA NA boxplot AC010761.6 NA chr17 28732963 28743102 - 10140 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC010761.6 NA 0.082 80-90% NA NA Normal,PAAD NA NA boxplot RP11-1109F11.3 NA chr12 89367807 89369301 + 1495 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1109F11.3 NA 0.035 30-40% NA NA Breast_cancer,CRC,Normal,PAAD NA NA boxplot CTD-3030D20.1 NA chr19 21276023 21276332 - 310 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-3030D20.1 NA 0.024 80-90% NA NA CRC NA NA boxplot RP3-467K16.2 NA chr1 15326680 15343876 - 17197 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-467K16.2 NA 0.024 10-20% NA NA CRC,Normal,PAAD NA NA boxplot DPH3P1 diphthamide biosynthesis 3 pseudogene 1 chr20 62845664 62845912 + 249 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DPH3P1 NA 0.012 0-10% NA NA PAAD NA NA boxplot RPP40P2 ribonuclease P/MRP 40kDa subunit pseudogene 2 chr13 59262680 59263391 + 712 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPP40P2 NA 0.012 30-40% NA NA CRC NA NA boxplot RP11-403I13.8 NA chr1 145164099 145216058 - 51960 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-403I13.8 NA 0.929 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(up),PAAD(up) NA boxplot RP11-290O12.2 NA chr4 154142122 154298819 + 156698 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-290O12.2 NA 0.047 10-20% NA NA CRC,HCC,Normal NA NA boxplot C1DP1 C1D nuclear receptor corepressor pseudogene 1 chr10 32511336 32511737 - 402 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=C1DP1 NA 1 0-10% NA NA CHD,CRC,HCC,Normal,PAAD CHD(up) NA boxplot CTD-2006K23.1 NA chr17 74599840 74607229 + 7390 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2006K23.1 NA 0.871 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),PAAD(down) NA boxplot RP11-109A6.5 NA chr10 129784983 129806971 + 21989 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-109A6.5 NA 0.141 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC073934.6 NA chr7 127644685 127652012 - 7328 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC073934.6 NA 0.024 70-80% Testis 4.661735722 CRC,Normal,PAAD NA NA boxplot RP11-154H23.5 NA chr3 71567863 71571112 + 3250 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-154H23.5 NA 0.012 80-90% NA NA HCC,PAAD NA NA boxplot CTD-2175A23.1 NA chr5 52932419 52990278 - 57860 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2175A23.1 NA 0.188 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-125F14.2 NA chr11 47323983 47324181 + 199 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-125F14.2 NA 0.012 90-100% NA NA NA NA NA boxplot RP4-736L20.3 NA chr1 10429881 10430677 - 797 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-736L20.3 NA 0.024 60-70% Testis 4.283843387 Normal,PAAD NA NA boxplot RP4-612B15.2 NA chr1 86784913 86785467 + 555 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-612B15.2 NA 0.388 80-90% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-501O2.4 NA chr3 148195729 148280098 - 84370 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-501O2.4 exo_circ_029753,exo_circ_009842 0.012 90-100% Testis 4.906892038 PAAD NA NA boxplot RP11-27K13.3 NA chr1 117025482 117059490 - 34009 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-27K13.3 NA 0.094 20-30% NA NA Breast_cancer,CRC,Normal,PAAD NA NA boxplot RP11-159F24.2 NA chr5 43336164 43348716 + 12553 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-159F24.2 NA 0.012 80-90% Testis 4.340066158 Breast_cancer,PAAD NA NA boxplot RP11-21A7A.2 NA chr11 64035970 64103653 + 67684 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-21A7A.2 NA 0.012 70-80% NA NA Breast_cancer NA NA boxplot HNRNPA3P10 heterogeneous nuclear ribonucleoprotein A3 pseudogene 10 chr12 51712469 51713606 - 1138 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HNRNPA3P10 NA 0.247 90-100% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot NUFIP1P nuclear fragile X mental retardation protein interacting protein 1 pseudogene chr6 66093431 66094909 - 1479 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NUFIP1P NA 0.812 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot RP11-481J2.4 NA chr16 58522970 58523842 + 873 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-481J2.4 NA 0.506 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CTB-50L17.9 NA chr19 4454014 4455286 + 1273 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTB-50L17.9 NA 0.376 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CTD-3128G10.7 NA chr19 6716386 6717742 - 1357 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-3128G10.7 NA 0.165 40-50% NA NA Breast_cancer,HCC,PAAD NA NA boxplot PRADC1P1 protease-associated domain containing 1 pseudogene 1 chr3 36976316 36976840 + 525 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PRADC1P1 NA 0.012 10-20% NA NA Normal NA NA boxplot CTC-338M12.6 NA chr5 181195496 181203103 + 7608 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-338M12.6 NA 0.118 50-60% Testis 1.061079739 Breast_cancer,CRC,HCC,Normal NA NA boxplot RP11-408A13.4 NA chr9 14588797 14590065 - 1269 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-408A13.4 exo_circ_039425 0.047 30-40% NA NA CRC,Normal NA NA boxplot RP13-1032I1.7 NA chr17 81701324 81703300 - 1977 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP13-1032I1.7 NA 0.753 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-102M11.1 NA chr3 136736500 136737229 - 730 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-102M11.1 NA 0.882 30-40% NA NA CRC,HCC,Normal,PAAD CRC(up) NA boxplot RP11-521C22.2 NA chr10 50334538 50336123 + 1586 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-521C22.2 NA 0.188 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-239A17.1 NA chr12 16661766 16788375 + 126610 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-239A17.1 NA 0.012 0-10% NA NA Breast_cancer,HCC NA NA boxplot RNF216P1 ring finger protein 216 pseudogene 1 chr7 4973988 5040675 + 66688 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RNF216P1 exo_circ_044636 1 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-513H8.1 NA chr8 134211865 134320447 - 108583 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-513H8.1 NA 0.024 30-40% NA NA PAAD NA NA boxplot LLNLF-191C12.1 NA chr19 51842878 51843315 - 438 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LLNLF-191C12.1 NA 0.024 10-20% NA NA Normal NA NA boxplot RP11-473M20.11 NA chr16 3106764 3109576 + 2813 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-473M20.11 NA 0.024 40-50% Testis 1.081945911 Breast_cancer,Normal NA NA boxplot RP11-680L20.1 NA chr11 87258851 87259259 - 409 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-680L20.1 NA 0.012 70-80% NA NA NA NA NA boxplot RP4-597N16.4 NA chr1 235104180 235104609 - 430 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-597N16.4 NA 0.035 90-100% NA NA HCC,Normal NA NA boxplot PPP1R12BP1 protein phosphatase 1 regulatory subunit 12B pseudogene 1 chrY 26277923 26354418 - 76496 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PPP1R12BP1 NA 0.012 90-100% Testis 4.759209713 HCC,Normal,PAAD NA NA boxplot AC007193.6 NA chr19 46101122 46196218 + 95097 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC007193.6 NA 0.012 70-80% NA NA Breast_cancer,HCC NA NA boxplot MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) chr11 65502914 65503008 + 95 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MALAT1 exo_circ_031196,exo_circ_009136,exo_circ_001793,exo_circ_016768,exo_circ_039732,exo_circ_045317,exo_circ_034023,exo_circ_050844,exo_circ_022582,exo_circ_045316,exo_circ_032017,exo_circ_036466 1 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down),CRC(up),HCC(down),PAAD(up) Yes boxplot RP5-906A24.2 NA chr17 39173290 39177503 + 4214 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-906A24.2 NA 0.024 60-70% Brain 4.906892038 HCC,Normal,PAAD NA NA boxplot CTB-186H2.2 NA chr17 35963488 35965472 - 1985 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTB-186H2.2 NA 0.012 10-20% Liver 4.906892038 Normal NA NA boxplot CTC-367J11.1 NA chr5 150475531 150485968 - 10438 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-367J11.1 NA 0.224 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot AC018442.1 NA chr8 99695957 99698017 + 2061 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC018442.1 NA 0.129 50-60% Skin 1.293722135 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot LINC01033 long intergenic non-protein coding RNA 1033 chr5 54320944 54415125 + 94182 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01033 NA 0.059 80-90% Testis 4.906892038 Breast_cancer,Normal,PAAD NA NA boxplot CTB-158E9.2 NA chr5 154493576 154494743 + 1168 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTB-158E9.2 NA 0.012 80-90% NA NA Breast_cancer,PAAD NA NA boxplot RP11-923I11.8 NA chr12 51817889 51818358 - 470 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-923I11.8 NA 0.024 80-90% NA NA Breast_cancer,Normal,PAAD NA NA boxplot RP11-276H7.3 NA chr1 16159266 16161883 + 2618 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-276H7.3 NA 0.024 30-40% NA NA CRC NA NA boxplot RP11-15J22.8 NA chr12 122501187 122501641 + 455 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-15J22.8 NA 0.024 70-80% NA NA Breast_cancer,CRC NA NA boxplot RP11-151F5.2 NA chr9 110024881 110025358 - 478 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-151F5.2 NA 0.059 90-100% NA NA HCC,Normal,PAAD NA NA boxplot CTD-2184D3.5 NA chr15 52056675 52100523 - 43849 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2184D3.5 NA 0.012 80-90% NA NA Breast_cancer,HCC NA NA boxplot RP11-78O7.3 NA chr17 19868568 19868689 + 122 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-78O7.3 NA 0.047 60-70% NA NA CRC,Normal NA NA boxplot RP4-530I15.9 NA chr20 50570975 50578041 - 7067 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-530I15.9 NA 0.188 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot GJA6P gap junction protein alpha 6 pseudogene chrX 18535079 18536120 + 1042 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GJA6P NA 0.082 60-70% NA NA Breast_cancer,CRC,Normal,PAAD NA NA boxplot CTC-756D1.2 NA chr8 23458601 23484971 + 26371 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-756D1.2 NA 0.071 20-30% NA NA CRC,HCC,PAAD NA NA boxplot RLIMP2 ring finger protein, LIM domain interacting pseudogene 2 chr1 113125321 113126883 - 1563 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RLIMP2 NA 0.106 70-80% NA NA HCC,Normal,PAAD NA NA boxplot RP11-512N21.3 NA chr12 101923410 101924719 - 1310 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-512N21.3 NA 0.035 30-40% Testis 4.129229085 Normal NA NA boxplot AC090602.2 NA chr15 24910874 24911125 - 252 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC090602.2 NA 0.047 90-100% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot RP11-122L4.2 NA chr8 39522976 39580134 + 57159 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-122L4.2 NA 0.012 70-80% NA NA HCC NA NA boxplot RP11-378A12.1 NA chr8 2589985 2623382 - 33398 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-378A12.1 NA 0.071 50-60% Testis 3.223075176 Breast_cancer,CRC,HCC,Normal NA NA boxplot RP11-744K17.3 NA chr17 22331597 22332410 + 814 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-744K17.3 NA 0.012 80-90% NA NA NA NA NA boxplot RP11-169E6.1 NA chr16 46973989 46978983 + 4995 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-169E6.1 NA 0.082 70-80% NA NA CRC,HCC,Normal NA NA boxplot RP11-384L8.1 NA chr3 32236688 32238578 - 1891 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-384L8.1 NA 0.247 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CTD-2001J20.1 NA chr19 30553956 30558058 + 4103 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2001J20.1 NA 0.035 20-30% NA NA Breast_cancer,Normal,PAAD NA NA boxplot CH17-302M23.1 NA chr14 22595808 22598946 - 3139 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CH17-302M23.1 NA 0.071 80-90% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot MTND5P33 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 5 pseudogene 33 chr16 10720015 10721464 - 1450 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MTND5P33 NA 0.012 90-100% NA NA NA NA NA boxplot RP11-401P9.6 NA chr16 50606076 50613684 - 7609 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-401P9.6 NA 0.012 20-30% NA NA Normal NA NA boxplot HMGB1P8 high mobility group box 1 pseudogene 8 chr15 89135547 89136495 - 949 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HMGB1P8 NA 0.012 70-80% NA NA Breast_cancer NA NA boxplot RP11-1277A3.2 NA chr5 177619059 177672209 - 53151 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1277A3.2 exo_circ_020834,exo_circ_007492 0.929 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot MIR365B microRNA 365b chr17 31571142 31575659 + 4518 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MIR365B NA 0.024 60-70% NA NA Breast_cancer,CRC,Normal NA NA boxplot RP5-1099D15.1 NA chr20 10612861 10614229 - 1369 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-1099D15.1 NA 0.741 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-555H23.1 NA chrX 5305714 5307128 - 1415 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-555H23.1 NA 0.012 40-50% NA NA CRC NA NA boxplot RP11-21M24.2 NA chr16 22374859 22378180 + 3322 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-21M24.2 NA 0.012 70-80% Testis 1.177041874 NA NA NA boxplot AC005481.5 NA chr7 157614023 157618765 + 4743 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC005481.5 NA 0.012 30-40% Testis 2.31174854 Breast_cancer,CRC NA NA boxplot RP11-548L20.1 NA chr4 34120894 34269747 - 148854 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-548L20.1 NA 0.012 40-50% Liver 4.263922431 PAAD NA NA boxplot RP11-4B16.1 NA chr18 77108284 77110537 - 2254 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-4B16.1 NA 0.118 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AL353898.1 NA chr1 54099968 54100224 - 257 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AL353898.1 NA 0.059 50-60% Fallopian Tube 4.906892038 HCC,Normal,PAAD NA NA boxplot PTGES3P1 prostaglandin E synthase 3 (cytosolic) pseudogene 1 chr1 89104285 89104767 - 483 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PTGES3P1 NA 1 0-10% NA NA CHD,CRC,HCC,Normal,PAAD CRC(down) NA boxplot RP11-290C10.1 NA chr12 9867027 9869808 + 2782 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-290C10.1 NA 0.165 50-60% Skin 1.511567072 CRC,HCC,Normal,PAAD NA NA boxplot RP11-34F13.2 NA chr15 67834310 67838879 - 4570 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-34F13.2 NA 0.059 50-60% NA NA Breast_cancer,CRC,Normal NA NA boxplot CTD-2147F2.1 NA chr15 97295881 97432094 + 136214 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2147F2.1 NA 0.012 90-100% Testis 3.178703305 HCC,PAAD NA NA boxplot AC000032.2 NA chr1 109693117 109693742 - 626 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC000032.2 NA 0.024 80-90% Testis 3.463648871 CRC,Normal NA NA boxplot LINC01182 long intergenic non-protein coding RNA 1182 chr4 13655179 13977075 + 321897 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01182 exo_circ_049225 0.329 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CCDC39-AS1 CCDC39 antisense RNA 1 chr3 180680084 180700449 + 20366 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CCDC39-AS1 NA 0.012 10-20% Testis 2.989891339 HCC NA NA boxplot OXCT2P1 3-oxoacid CoA-transferase 2 pseudogene 1 chr1 39514956 39516490 + 1535 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=OXCT2P1 NA 0.212 10-20% Testis 1.54567456 CHD,CRC,HCC,Normal,PAAD CHD(up) NA boxplot RP11-216L13.18 NA chr9 136800366 136829466 + 29101 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-216L13.18 NA 0.906 10-20% NA NA CRC,HCC,Normal,PAAD CHD(down) NA boxplot FKBP9P1 FK506 binding protein 9 pseudogene 1 chr7 55681074 55713252 - 32179 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FKBP9P1 NA 0.482 30-40% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot GS1-393G12.14 NA chr8 144409492 144409976 + 485 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GS1-393G12.14 NA 0.094 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot TSIX TSIX transcript, XIST antisense RNA chrX 73792205 73829231 + 37027 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TSIX NA 0.271 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD PAAD(up) NA boxplot RMRP RNA component of mitochondrial RNA processing endoribonuclease chr9 35657754 35658017 - 264 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RMRP NA 1 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up),CRC(up),PAAD(up) NA boxplot TCF7L1-IT1 TCF7L1 intronic transcript 1 chr2 85186409 85187253 + 845 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TCF7L1-IT1 NA 0.071 50-60% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot RP11-646I19.1 NA chr2 166414489 166414729 + 241 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-646I19.1 NA 0.012 70-80% NA NA Normal NA NA boxplot RP11-788A1.1 NA chr2 131821987 131822920 - 934 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-788A1.1 NA 0.012 60-70% NA NA HCC NA NA boxplot RP1-292L20.3 NA chr14 70906657 70907111 - 455 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-292L20.3 NA 0.388 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot ENO1-AS1 ENO1 antisense RNA 1 chr1 8878835 8879894 + 1060 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ENO1-AS1 NA 0.118 60-70% Testis 1.643746153 Breast_cancer,CRC,HCC,Normal NA NA boxplot RP11-73M7.9 NA chr1 31644694 31649371 + 4678 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-73M7.9 NA 0.012 60-70% Testis 2.305448268 NA NA NA boxplot RP5-1073O3.2 NA chr1 113812379 113829171 + 16793 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-1073O3.2 exo_circ_037874 0.024 60-70% Testis 3.827218594 CRC,Normal NA NA boxplot RP5-1057I20.4 NA chr12 47784923 47786002 + 1080 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-1057I20.4 NA 0.212 70-80% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot LINC00880 long intergenic non-protein coding RNA 880 chr3 157081667 157123004 - 41338 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00880 NA 0.165 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CIDECP cell death-inducing DFFA-like effector c pseudogene chr3 10014238 10026365 - 12128 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CIDECP NA 0.976 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot PARP4P3 NA chr22 16653892 16659628 - 5737 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PARP4P3 NA 0.012 60-70% Testis 1.162398529 Normal NA NA boxplot CMAHP cytidine monophospho-N-acetylneuraminic acid hydroxylase, pseudogene chr6 25081068 25166555 - 85488 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CMAHP exo_circ_049798,exo_circ_012954,exo_circ_022127,exo_circ_024699,exo_circ_049799,exo_circ_030584,exo_circ_044456,exo_circ_055185,exo_circ_041564,exo_circ_049800,exo_circ_022128,exo_circ_055184,exo_circ_020871,exo_circ_014138 1 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down) NA boxplot PFN1P1 profilin 1 pseudogene 1 chr1 171670517 171670939 - 423 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PFN1P1 NA 1 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP1-178F15.5 NA chr1 153626332 153634340 - 8009 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-178F15.5 NA 0.847 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down) NA boxplot RP11-442N24__B.1 NA chr1 28643228 28648581 + 5354 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-442N24__B.1 NA 0.212 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-401G5.1 NA chr9 73870896 73873297 - 2402 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-401G5.1 NA 0.012 90-100% NA NA NA NA NA boxplot AC105393.2 NA chr2 421057 422303 + 1247 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC105393.2 NA 0.012 60-70% Testis 3.604631631 CRC NA NA boxplot YRDCP1 yrdC N(6)-threonylcarbamoyltransferase domain containing pseudogene 1 chr9 94432631 94433273 - 643 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=YRDCP1 NA 0.012 90-100% NA NA Breast_cancer,PAAD NA NA boxplot CTA-331P3.1 NA chr6 110477907 110479436 + 1530 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTA-331P3.1 NA 0.329 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot VTI1BP1 vesicle transport through interaction with t-SNAREs 1B pseudogene 1 chr3 100225374 100226073 + 700 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=VTI1BP1 NA 0.012 80-90% NA NA Breast_cancer,Normal NA NA boxplot RP1-241P17.4 NA chrX 115718942 115719229 - 288 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-241P17.4 NA 0.929 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down) NA boxplot SBF2-AS1 SBF2 antisense RNA 1 chr11 9758292 9811319 + 53028 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SBF2-AS1 NA 0.929 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up) NA boxplot ADIRF-AS1 ADIRF antisense RNA 1 chr10 86965345 86971311 - 5967 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ADIRF-AS1 NA 0.388 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC092667.2 NA chr2 100104919 100107504 + 2586 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC092667.2 NA 0.212 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot LINC01204 long intergenic non-protein coding RNA 1204 chrX 45505388 45630202 + 124815 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01204 NA 0.035 10-20% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot RP11-472N19.3 NA chr14 92253493 92263656 - 10164 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-472N19.3 NA 0.035 70-80% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot LINC00621 long intergenic non-protein coding RNA 621 chr13 22894656 22916369 - 21714 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00621 NA 0.012 80-90% NA NA Breast_cancer,HCC NA NA boxplot RPL34P33 ribosomal protein L34 pseudogene 33 chr19 22699352 22699685 + 334 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL34P33 NA 0.012 90-100% Testis 4.906892038 HCC NA NA boxplot RP11-40C6.2 NA chr9 87525302 87525475 + 174 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-40C6.2 NA 0.035 70-80% NA NA CRC NA NA boxplot RP11-317F20.3 NA chr10 114424445 114427398 - 2954 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-317F20.3 NA 0.012 0-10% NA NA Breast_cancer NA NA boxplot CTAGE7P CTAGE family member 7, pseudogene chr10 130106046 130108481 + 2436 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTAGE7P NA 0.059 90-100% NA NA Breast_cancer,HCC,Normal NA NA boxplot RP11-3K16.1 NA chr3 169709295 169709765 + 471 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-3K16.1 NA 0.094 90-100% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CTD-2373J6.1 NA chr5 90388468 90389363 - 896 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2373J6.1 NA 0.129 10-20% NA NA HCC,Normal,PAAD NA NA boxplot FLJ37505 uncharacterized LOC400087 chr12 127881617 127898639 + 17023 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FLJ37505 NA 0.012 60-70% NA NA Normal NA NA boxplot UBE2Q2P8 ubiquitin conjugating enzyme E2Q family member 2 pseudogene 8 chr15 84255913 84256014 + 102 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=UBE2Q2P8 NA 0.012 70-80% NA NA Normal NA NA boxplot MTND4P16 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 pseudogene 16 chr3 106894352 106895718 - 1367 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MTND4P16 NA 0.012 80-90% NA NA NA NA NA boxplot RP11-64B16.2 NA chr12 119194850 119195394 + 545 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-64B16.2 NA 0.929 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot AC002480.3 NA chr7 22563337 22573996 + 10660 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC002480.3 exo_circ_055430,exo_circ_008990 0.706 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),PAAD(down) NA boxplot RP11-728F11.3 NA chr11 117818443 117821992 + 3550 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-728F11.3 NA 0.012 60-70% Kidney 3.326928098 PAAD NA NA boxplot RP11-93I21.3 NA chr4 124499942 124558434 - 58493 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-93I21.3 NA 0.553 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot ASAP1-IT2 ASAP1 intronic transcript 2 chr8 130082738 130084768 - 2031 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ASAP1-IT2 exo_circ_033659,exo_circ_024713 0.118 20-30% NA NA Breast_cancer,CRC,Normal,PAAD NA NA boxplot RP5-1050D4.3 NA chr17 4967995 4968822 + 828 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-1050D4.3 NA 0.271 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-429G19.3 NA chr10 95833508 95873758 + 40251 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-429G19.3 NA 0.341 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot PPIAP2 peptidylprolyl isomerase A (cyclophilin A) pseudogene 2 chr20 25368275 25368766 - 492 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PPIAP2 NA 0.059 60-70% NA NA CRC,Normal NA NA boxplot DAP3P2 death associated protein 3 pseudogene 2 chr2 171491422 171491931 + 510 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DAP3P2 NA 0.071 10-20% NA NA CHD,HCC,Normal NA NA boxplot TTC28-AS1 TTC28 antisense RNA 1 chr22 27919376 28008581 + 89206 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TTC28-AS1 NA 0.894 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot CASC8 cancer susceptibility candidate 8 (non-protein coding) chr8 127289817 127482139 - 192323 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CASC8 exo_circ_004370 0.224 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot ADAM1B ADAM metallopeptidase domain 1B (pseudogene) chr12 111927018 111929017 + 2000 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ADAM1B NA 0.024 90-100% NA NA Normal NA NA boxplot XIST X inactive specific transcript (non-protein coding) chrX 73820651 73852753 - 32103 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=XIST NA 0.624 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CRC(up),HCC(down),PAAD(up) NA boxplot RPL36AP45 ribosomal protein L36a pseudogene 45 chr15 75186651 75186968 - 318 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL36AP45 NA 0.035 90-100% Testis 2.079604705 Normal NA NA boxplot RP11-117D22.2 NA chr1 53366668 53368245 - 1578 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-117D22.2 NA 0.388 30-40% Spleen 2.262476074 CRC,HCC,Normal,PAAD NA NA boxplot RP11-826N14.4 NA chr5 176137157 176155738 + 18582 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-826N14.4 NA 0.059 60-70% Testis 3.007062541 CRC,HCC,Normal,PAAD NA NA boxplot LINC00304 long intergenic non-protein coding RNA 304 chr16 89159146 89164245 + 5100 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00304 NA 0.129 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot ILF2P1 interleukin enhancer binding factor 2 pseudogene 1 chr3 65687301 65688468 + 1168 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ILF2P1 NA 0.012 80-90% NA NA NA NA NA boxplot RP11-605P22.1 NA chr7 37796058 37796888 + 831 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-605P22.1 NA 0.059 10-20% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-85K15.3 NA chr14 35086035 35088059 + 2025 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-85K15.3 NA 0.071 70-80% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot LCMT1-AS1 LCMT1 antisense RNA 1 chr16 25085592 25111555 - 25964 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LCMT1-AS1 NA 0.271 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RPL31P52 ribosomal protein L31 pseudogene 52 chr12 120450437 120450803 - 367 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL31P52 NA 0.024 70-80% NA NA CRC,HCC NA NA boxplot OFD1P1Y OFD1 pseudogene 1, Y-linked chrY 17809807 17825329 + 15523 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=OFD1P1Y NA 0.024 10-20% NA NA CHD,HCC,Normal NA NA boxplot SPATA42 spermatogenesis associated 42 (non-protein coding) chr1 108857217 108858524 + 1308 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SPATA42 NA 0.024 80-90% Testis 4.872731644 CRC NA NA boxplot RP11-706F1.1 NA chr4 189193100 189204877 + 11778 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-706F1.1 NA 0.024 60-70% Testis 4.906892038 Breast_cancer,HCC NA NA boxplot CTD-2545M3.8 NA chr19 50486810 50487638 - 829 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2545M3.8 NA 0.341 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-278C7.4 NA chr12 32725248 32725660 - 413 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-278C7.4 NA 0.094 50-60% NA NA CRC,HCC,Normal NA NA boxplot AC020743.2 NA chr7 50141540 50142823 - 1284 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC020743.2 NA 0.035 50-60% NA NA CRC,HCC,Normal NA NA boxplot RP11-775D22.2 NA chr7 130141731 130142615 + 885 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-775D22.2 NA 0.188 70-80% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot SLX1A-SULT1A3 SLX1A-SULT1A3 readthrough (NMD candidate) chr16 30193892 30204310 + 10419 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SLX1A-SULT1A3 NA 0.976 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up),CRC(up),HCC(up),PAAD(up) NA boxplot RP11-14I17.2 NA chr8 26422593 26423929 + 1337 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-14I17.2 NA 0.012 90-100% NA NA NA NA NA boxplot AC012507.4 NA chr2 230908852 230910102 + 1251 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC012507.4 NA 0.8 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down),HCC(down) NA boxplot AC009299.5 NA chr2 161340816 161341326 - 511 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC009299.5 NA 0.929 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down) NA boxplot RP11-70F11.8 NA chr12 49911953 49930320 + 18368 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-70F11.8 NA 0.024 70-80% Testis 4.548337416 Breast_cancer,HCC,Normal NA NA boxplot RP11-823P9.4 NA chr5 21493436 21494596 + 1161 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-823P9.4 NA 0.024 60-70% NA NA Breast_cancer,CRC,Normal NA NA boxplot RP11-776B3.1 NA chr18 46915021 46915623 - 603 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-776B3.1 NA 0.059 80-90% NA NA CRC NA NA boxplot LL0XNC01-116E7.1 NA chrX 103910305 103911352 - 1048 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LL0XNC01-116E7.1 NA 0.035 80-90% NA NA CRC,Normal NA NA boxplot RP5-1055C14.6 NA chrX 103651735 103652106 - 372 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-1055C14.6 NA 0.471 10-20% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot WDR7-OT1 WDR7 overlapping transcript 1 chr18 57027832 57038845 + 11014 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=WDR7-OT1 NA 0.541 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot AC016717.1 NA chr2 225698254 225698539 + 286 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC016717.1 NA 0.024 20-30% Pituitary 2.640974607 PAAD NA NA boxplot RP11-227D13.4 NA chr15 48729080 48729844 - 765 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-227D13.4 NA 0.188 60-70% Testis 3.393257562 CRC,HCC,Normal,PAAD NA NA boxplot RP11-566K19.6 NA chr15 22757857 22778741 + 20885 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-566K19.6 NA 0.588 10-20% Testis 1.456336314 Breast_cancer,CRC,HCC,Normal,PAAD PAAD(up) NA boxplot EGFR-AS1 EGFR antisense RNA 1 chr7 55179750 55188934 - 9185 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=EGFR-AS1 NA 0.047 40-50% NA NA Breast_cancer,HCC,Normal NA NA boxplot RP11-837J7.3 NA chr12 109997419 109999127 - 1709 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-837J7.3 NA 0.047 60-70% NA NA Breast_cancer,Normal,PAAD NA NA boxplot RP4-563E14.1 NA chr20 62928621 62929297 - 677 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-563E14.1 NA 0.282 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot AC090505.6 NA chr3 194708421 194782168 + 73748 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC090505.6 NA 0.035 50-60% Testis 4.796801904 Breast_cancer,Normal,PAAD NA NA boxplot KLHL30-AS1 KLHL30 antisense RNA 1 chr2 238152889 238155994 - 3106 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KLHL30-AS1 NA 0.035 50-60% NA NA Breast_cancer,Normal,PAAD NA NA boxplot CTB-5E10.3 NA chr19 13772118 13774118 - 2001 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTB-5E10.3 NA 0.153 60-70% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot RP11-347C12.8 NA chr16 30218220 30221930 + 3711 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-347C12.8 NA 0.071 90-100% NA NA CRC,HCC,PAAD NA NA boxplot NUS1P2 NUS1 dehydrodolichyl diphosphate synthase subunit pseudogene 2 chr13 22915651 22916523 + 873 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NUS1P2 NA 0.047 40-50% Kidney 3.012963849 Breast_cancer,CHD,CRC,HCC,Normal NA NA boxplot CTD-2270P14.1 NA chr16 2660349 2673444 - 13096 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2270P14.1 NA 0.682 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(up),HCC(down),PAAD(up) NA boxplot AP000695.6 NA chr21 36430360 36481070 + 50711 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AP000695.6 NA 0.259 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-463O9.2 NA chr16 86595189 86597639 + 2451 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-463O9.2 NA 0.012 90-100% NA NA Breast_cancer NA NA boxplot RP11-596C23.6 NA chr14 49861176 49864326 - 3151 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-596C23.6 NA 0.506 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot LINC00189 long intergenic non-protein coding RNA 189 chr21 29193480 29288205 + 94726 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00189 NA 0.412 30-40% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-448N11.2 NA chr6 62547427 62548272 + 846 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-448N11.2 NA 0.012 30-40% NA NA HCC NA NA boxplot SNX18P5 sorting nexin 18 pseudogene 5 chr9 42923277 42924144 + 868 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SNX18P5 NA 0.012 20-30% Testis 4.906892038 Breast_cancer,CHD NA NA boxplot RP11-383G6.4 NA chr3 142450102 142452149 + 2048 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-383G6.4 NA 0.047 30-40% NA NA Breast_cancer,Normal,PAAD NA NA boxplot RPL29P33 ribosomal protein L29 pseudogene 33 chr19 34296277 34296592 - 316 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL29P33 NA 0.082 90-100% NA NA CHD,CRC,Normal,PAAD NA NA boxplot AF196970.3 NA chrX 48698963 48737163 - 38201 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AF196970.3 NA 0.471 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot ARMC4P1 armadillo repeat containing 4 pseudogene 1 chr10 27258762 27288824 + 30063 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ARMC4P1 NA 0.224 20-30% Testis 2.603182989 CRC,HCC,Normal,PAAD NA NA boxplot NSFP1 N-ethylmaleimide-sensitive factor pseudogene 1 chr17 46372855 46487141 + 114287 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NSFP1 NA 0.988 0-10% NA NA CHD,CRC,HCC,Normal,PAAD CRC(up),HCC(up),PAAD(up) NA boxplot RP4-697P8.3 NA chr20 10875333 10909272 - 33940 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-697P8.3 NA 0.012 10-20% Testis 4.906892038 Breast_cancer,Normal NA NA boxplot RNASEH2CP1 ribonuclease H2 subunit C pseudogene 1 chrY 2789827 2790328 + 502 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RNASEH2CP1 NA 0.012 60-70% Skin 4.185777613 Normal NA NA boxplot RP1-80N2.4 NA chr6 6685148 6686984 + 1837 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-80N2.4 NA 0.012 30-40% NA NA Breast_cancer,Normal NA NA boxplot RP11-476J6.1 NA chr14 47801926 47802201 - 276 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-476J6.1 NA 0.012 70-80% NA NA PAAD NA NA boxplot PLA2G12AP1 phospholipase A2 group XIIA pseudogene 1 chr1 52368677 52369244 + 568 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PLA2G12AP1 NA 0.553 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-498P14.3 NA chr9 97195351 97197687 - 2337 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-498P14.3 NA 0.6 20-30% NA NA CRC,HCC,Normal,PAAD PAAD(up) NA boxplot LPP-AS2 LPP antisense RNA 2 chr3 188151206 188154057 - 2852 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LPP-AS2 NA 0.8 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-872J21.5 NA chr14 96537170 96537904 + 735 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-872J21.5 NA 0.235 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot C22orf24 chromosome 22 open reading frame 24 chr22 31933521 31945518 - 11998 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=C22orf24 NA 0.282 40-50% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot LINC00607 long intergenic non-protein coding RNA 607 chr2 215611563 215843722 - 232160 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00607 exo_circ_015844 0.153 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-425A6.5 NA chr10 35604485 35608153 - 3669 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-425A6.5 NA 0.012 30-40% NA NA Breast_cancer,PAAD NA NA boxplot AC093724.2 NA chr2 131723253 131724279 - 1027 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC093724.2 NA 0.282 80-90% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC010761.9 NA chr17 28745569 28747652 - 2084 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC010761.9 NA 0.082 80-90% NA NA HCC,Normal,PAAD NA NA boxplot RP11-24N18.1 NA chr16 28830612 28837200 - 6589 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-24N18.1 NA 0.741 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot ANP32AP1 acidic nuclear phosphoprotein 32 family member A pseudogene 1 chr15 35181799 35238197 + 56399 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ANP32AP1 NA 0.071 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC097381.1 NA chr4 7939001 7940296 + 1296 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC097381.1 NA 0.047 80-90% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot RP3-439F8.1 NA chr22 46541495 46548196 + 6702 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-439F8.1 NA 0.024 30-40% NA NA Breast_cancer,Normal NA NA boxplot TPTEP1 transmembrane phosphatase with tensin homology pseudogene 1 chr22 16601887 16698742 + 96856 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TPTEP1 NA 1 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down) NA boxplot GAPLINC gastric adenocarcinoma associated, positive CD44 regulator, long intergenic non-coding RNA chr18 3466250 3478978 + 12729 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GAPLINC NA 0.129 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RPL21P108 ribosomal protein L21 pseudogene 108 chr13 74377163 74377951 - 789 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL21P108 NA 0.012 50-60% NA NA Normal NA NA boxplot RORA-AS1 RORA antisense RNA 1 chr15 60479178 60630637 + 151460 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RORA-AS1 exo_circ_057211 0.565 20-30% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot POM121L9P POM121 transmembrane nucleoporin like 9, pseudogene chr22 24251828 24265525 + 13698 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=POM121L9P NA 0.047 40-50% Testis 1.960012106 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot IKBKGP1 inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase gamma pseudogene 1 chrX 154639978 154648275 - 8298 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=IKBKGP1 NA 0.988 0-10% Spleen 4.090594954 CHD,CRC,HCC,Normal,PAAD CHD(up),CRC(up),HCC(up),PAAD(up) NA boxplot ATP5A1P3 ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1 pseudogene 3 chr16 72005037 72006543 - 1507 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ATP5A1P3 NA 0.047 20-30% NA NA CHD,CRC,HCC,Normal NA NA boxplot RPS27AP2 ribosomal protein S27a pseudogene 2 chr20 17516843 17517307 + 465 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPS27AP2 NA 0.224 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot LINC01119 long intergenic non-protein coding RNA 1119 chr2 46816697 46859007 + 42311 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01119 NA 0.059 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot KIF25-AS1 KIF25 antisense RNA 1 chr6 167992822 167997077 - 4256 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KIF25-AS1 NA 0.118 30-40% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot FRG2KP NA chr16 31563082 31567716 - 4635 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FRG2KP NA 0.012 90-100% NA NA Breast_cancer,HCC NA NA boxplot CEBPB-AS1 CEBPB antisense RNA 1 chr20 50184598 50191498 - 6901 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CEBPB-AS1 NA 0.635 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up) NA boxplot LINC01151 long intergenic non-protein coding RNA 1151 chr8 122670385 122694106 - 23722 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01151 NA 0.918 0-10% NA NA CHD,CRC,HCC,Normal,PAAD CHD(down),HCC(down) NA boxplot RP1-163M9.8 NA chr1 16656879 16667524 + 10646 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-163M9.8 NA 0.282 70-80% NA NA Breast_cancer,CRC,HCC,PAAD NA NA boxplot RP11-126O1.5 NA chr18 58670009 58671877 - 1869 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-126O1.5 NA 0.224 50-60% Testis 1.54304268 CRC,HCC,Normal,PAAD NA NA boxplot GGT4P gamma-glutamyltransferase 4 pseudogene chr13 18253526 18270822 - 17297 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GGT4P NA 0.012 70-80% NA NA Breast_cancer NA NA boxplot FOXG1-AS1 FOXG1 antisense RNA 1 (head to head) chr14 28729083 28765277 - 36195 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FOXG1-AS1 NA 0.012 70-80% NA NA HCC NA NA boxplot OR5AK4P olfactory receptor family 5 subfamily AK member 4 pseudogene chr11 57037534 57038436 + 903 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=OR5AK4P NA 0.047 0-10% Spleen 4.906892038 Normal NA NA boxplot RP11-215P8.3 NA chr5 134399495 134401921 + 2427 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-215P8.3 NA 0.071 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RNU11 RNA, U11 small nuclear chr1 28648600 28648733 + 134 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RNU11 NA 0.141 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-182M20.2 NA chr13 75375511 75377294 - 1784 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-182M20.2 NA 0.024 20-30% NA NA PAAD NA NA boxplot RP11-126H7.4 NA chr10 77866875 77869610 + 2736 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-126H7.4 NA 0.012 90-100% NA NA Breast_cancer,CRC NA NA boxplot RP11-259O2.1 NA chr5 1933863 1959176 + 25314 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-259O2.1 NA 0.024 20-30% NA NA PAAD NA NA boxplot RP11-264B17.5 NA chr16 28989140 28990778 - 1639 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-264B17.5 NA 0.259 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot DGCR12 DiGeorge syndrome critical region gene 12 (non-protein coding) chr22 19061041 19061843 - 803 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DGCR12 NA 0.071 60-70% NA NA CRC,Normal,PAAD NA NA boxplot RP11-844P9.5 NA chr5 176143085 176185155 - 42071 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-844P9.5 exo_circ_008909 0.106 50-60% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot RP11-345P4.9 NA chr1 1613758 1615795 - 2038 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-345P4.9 NA 0.588 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RPL15P18 ribosomal protein L15 pseudogene 18 chr13 100150481 100151092 - 612 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL15P18 NA 0.024 80-90% Ovary 4.228226049 Breast_cancer,Normal,PAAD NA NA boxplot CTC-236F12.4 NA chr5 56457795 56481946 - 24152 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-236F12.4 NA 0.188 60-70% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot LINC00950 long intergenic non-protein coding RNA 950 chr9 35858738 35865518 + 6781 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00950 NA 0.282 20-30% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RPS7P10 ribosomal protein S7 pseudogene 10 chr13 21628413 21629015 - 603 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPS7P10 NA 1 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CRC(down) NA boxplot RP11-613M5.2 NA chr12 76660405 76660884 + 480 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-613M5.2 NA 0.788 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot DICER1-AS1 DICER1 antisense RNA 1 chr14 95157645 95179933 + 22289 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DICER1-AS1 NA 0.506 20-30% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up) NA boxplot RP11-805F19.3 NA chr18 14990707 14993235 - 2529 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-805F19.3 NA 0.012 30-40% NA NA Breast_cancer,HCC NA NA boxplot SNHG23 small nucleolar RNA host gene 23 chr14 100894770 101027415 + 132646 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SNHG23 exo_circ_001472,exo_circ_016956,exo_circ_051279,exo_circ_051283,exo_circ_034269,exo_circ_028547,exo_circ_051281,exo_circ_022788,exo_circ_031252,exo_circ_051282,exo_circ_041721,exo_circ_011028,exo_circ_045649 0.765 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-216N14.8 NA chr1 153746851 153751227 - 4377 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-216N14.8 NA 0.082 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP13-128O4.3 NA chrX 118769796 118770857 + 1062 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP13-128O4.3 NA 0.071 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-461F16.3 NA chr12 76878193 76880352 + 2160 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-461F16.3 exo_circ_019598 0.012 90-100% NA NA Breast_cancer NA NA boxplot RP3-407E4.4 NA chr6 63440766 63443580 + 2815 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-407E4.4 NA 0.012 90-100% NA NA HCC NA NA boxplot RP11-1E6.1 NA chr4 43340875 43345600 + 4726 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1E6.1 NA 0.129 40-50% Testis 4.906892038 CRC,HCC,Normal,PAAD NA NA boxplot AC097713.4 NA chr2 234444590 234454595 - 10006 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC097713.4 NA 0.212 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-396B14.2 NA chr16 11196177 11224969 + 28793 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-396B14.2 NA 0.047 70-80% NA NA Breast_cancer,Normal,PAAD NA NA boxplot P2RY10P2 purinergic receptor P2Y, G-protein coupled, 10 pseudogene 2 chrX 79084936 79085848 + 913 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=P2RY10P2 NA 0.012 80-90% NA NA HCC NA NA boxplot AP001437.1 NA chr21 37365477 37365932 - 456 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AP001437.1 exo_circ_034875 0.188 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot AC000403.4 NA chr13 76887551 76891135 + 3585 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC000403.4 NA 0.624 10-20% NA NA CRC,HCC,Normal,PAAD CHD(down) NA boxplot ATP11AUN ATP11A upstream neighbor chr13 112647044 112684497 + 37454 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ATP11AUN NA 0.012 30-40% NA NA Breast_cancer,HCC NA NA boxplot RP11-80B9.1 NA chr1 240765557 240768680 + 3124 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-80B9.1 NA 0.012 60-70% Testis 4.10089473 Normal NA NA boxplot AF127577.8 NA chr21 14918534 14947096 + 28563 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AF127577.8 NA 0.012 50-60% NA NA Breast_cancer,HCC NA NA boxplot AC124789.1 NA chr17 38450394 38452444 - 2051 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC124789.1 NA 0.318 40-50% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot AJ003147.11 NA chr16 3273609 3275807 + 2199 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AJ003147.11 NA 0.176 10-20% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot KRT8P36 keratin 8 pseudogene 36 chr3 138101478 138102917 - 1440 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KRT8P36 NA 0.024 70-80% NA NA Breast_cancer,PAAD NA NA boxplot RP11-72M17.1 NA chr14 66212810 66509394 - 296585 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-72M17.1 NA 0.329 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP1-261D10.1 NA chr14 71330342 71330738 - 397 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-261D10.1 NA 0.635 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-51L5.5 NA chr17 62282387 62297026 - 14640 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-51L5.5 NA 0.8 40-50% Testis 4.906892038 CRC,HCC,Normal,PAAD NA NA boxplot TTLL11-IT1 TTLL11 intronic transcript 1 chr9 121884636 121963719 - 79084 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TTLL11-IT1 NA 0.035 80-90% NA NA CRC NA NA boxplot RP13-348B13.2 NA chrX 89423738 89446983 + 23246 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP13-348B13.2 NA 0.106 70-80% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RPSAP52 ribosomal protein SA pseudogene 52 chr12 65758020 65826997 - 68978 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPSAP52 NA 0.035 40-50% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot AC009227.3 NA chr2 154459857 154460820 + 964 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC009227.3 exo_circ_015798 0.012 10-20% Brain 4.906892038 Normal NA NA boxplot RP11-446E24.3 NA chr1 54137746 54142980 + 5235 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-446E24.3 NA 0.012 30-40% NA NA Breast_cancer,HCC NA NA boxplot RP11-272D12.1 NA chr15 73335260 73342387 + 7128 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-272D12.1 NA 0.012 90-100% Testis 4.906892038 Breast_cancer,PAAD NA NA boxplot LINC00174 long intergenic non-protein coding RNA 174 chr7 66376044 66401338 - 25295 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00174 NA 0.588 20-30% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot LLNLR-245B6.1 NA chr19 58310449 58326933 - 16485 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LLNLR-245B6.1 NA 0.871 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down) NA boxplot AP000437.3 NA chr11 61143380 61145464 - 2085 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AP000437.3 NA 0.071 40-50% NA NA Breast_cancer,CRC,Normal,PAAD NA NA boxplot RP11-96D1.11 NA chr16 68225969 68229145 - 3177 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-96D1.11 NA 0.635 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot RP11-416I2.1 NA chr17 17011914 17014990 - 3077 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-416I2.1 NA 0.024 90-100% Brain 3.11190756 Breast_cancer,PAAD NA NA boxplot RBM22P2 RNA binding motif protein 22 pseudogene 2 chr13 30539597 30543461 - 3865 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RBM22P2 NA 0.035 30-40% NA NA Breast_cancer,Normal,PAAD NA NA boxplot AC006116.12 NA chr19 56387412 56388424 + 1013 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC006116.12 NA 0.012 70-80% NA NA HCC,Normal NA NA boxplot RP11-286B14.2 NA chr1 95743096 95759470 + 16375 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-286B14.2 NA 0.012 60-70% Salivary Gland 4.062632168 PAAD NA NA boxplot RP11-247A12.8 NA chr9 129175807 129177575 + 1769 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-247A12.8 NA 0.024 70-80% NA NA CRC,HCC,Normal NA NA boxplot RP11-12M9.4 NA chr22 41074180 41075239 - 1060 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-12M9.4 NA 0.012 20-30% NA NA Breast_cancer,Normal NA NA boxplot HERC2P10 hect domain and RLD 2 pseudogene 10 chr15 30815271 30844153 + 28883 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HERC2P10 NA 0.071 50-60% Testis 1.643083677 Breast_cancer,CRC,HCC,Normal NA NA boxplot COX17P1 COX17, cytochrome c oxidase copper chaperone pseudogene 1 chr13 46490930 46491121 + 192 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=COX17P1 NA 0.847 60-70% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP5-837J1.6 NA chr17 35018660 35018991 + 332 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-837J1.6 exo_circ_034572 0.012 90-100% NA NA NA NA NA boxplot RPL35P6 ribosomal protein L35 pseudogene 6 chr8 18774547 18774918 - 372 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL35P6 NA 0.094 50-60% Heart 2.776442332 HCC,Normal,PAAD NA NA boxplot RP11-641C17.1 NA chr3 60732144 60732636 - 493 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-641C17.1 NA 0.012 70-80% NA NA NA NA NA boxplot KCNMB3P1 potassium channel subfamily M regulatory beta subunit 3 pseudogene 1 chr22 16575363 16582707 - 7345 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KCNMB3P1 NA 0.059 60-70% Testis 4.906892038 HCC,Normal,PAAD NA NA boxplot RP11-278A23.1 NA chr16 87693537 87696147 - 2611 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-278A23.1 NA 0.247 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot LINC01556 long intergenic non-protein coding RNA 1556 chr6 28943877 28944537 + 661 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01556 NA 0.012 90-100% NA NA HCC NA NA boxplot AC027612.4 NA chr2 91736726 91767439 + 30714 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC027612.4 NA 0.047 70-80% Testis 3.204575241 Breast_cancer,PAAD NA NA boxplot RPL10P15 ribosomal protein L10 pseudogene chr19 9820141 9820455 + 315 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL10P15 NA 0.341 90-100% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-686O6.1 NA chr2 202336739 202337200 + 462 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-686O6.1 NA 0.035 50-60% NA NA CRC,Normal NA NA boxplot UXT-AS1 UXT antisense RNA 1 chrX 47658833 47660377 + 1545 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=UXT-AS1 NA 0.435 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-347L15.1 NA chr17 56803841 56804269 - 429 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-347L15.1 NA 0.012 0-10% NA NA PAAD NA NA boxplot RP13-492C18.2 NA chr7 56421857 56448375 - 26519 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP13-492C18.2 NA 0.035 40-50% Testis 3.516367693 HCC,Normal NA NA boxplot CTD-2341M24.1 NA chr14 85934710 86129778 + 195069 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2341M24.1 exo_circ_037572,exo_circ_034329 0.918 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(down) NA boxplot RASGRF2-AS1 RASGRF2 antisense RNA 1 chr5 80947697 80960907 - 13211 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RASGRF2-AS1 NA 0.141 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot TSPEAR-AS2 TSPEAR antisense RNA 2 chr21 44517216 44525952 + 8737 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TSPEAR-AS2 NA 0.024 20-30% NA NA Breast_cancer,Normal NA NA boxplot RP11-202H2.1 NA chr12 86599578 86838998 - 239421 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-202H2.1 NA 0.024 80-90% NA NA Normal NA NA boxplot RP11-835E18.4 NA chr18 5240255 5241167 - 913 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-835E18.4 NA 0.094 50-60% NA NA Normal,PAAD NA NA boxplot RP11-158I9.8 NA chr11 118791254 118793137 + 1884 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-158I9.8 NA 0.671 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD PAAD(up) NA boxplot RP11-15B24.4 NA chr9 82451656 82455225 + 3570 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-15B24.4 NA 0.024 40-50% Testis 4.906892038 CRC,HCC,Normal NA NA boxplot RP11-134G8.6 NA chr1 201520056 201520549 + 494 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-134G8.6 NA 0.365 70-80% NA NA CRC,HCC,Normal,PAAD NA NA boxplot FAM201A family with sequence similarity 201 member A chr9 38620474 38624990 + 4517 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FAM201A NA 0.129 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot AC074011.2 NA chr2 28633282 28664540 - 31259 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC074011.2 NA 0.059 50-60% NA NA Breast_cancer,Normal NA NA boxplot CTD-2006C1.2 NA chr19 11987617 12046275 + 58659 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2006C1.2 NA 0.906 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-420K14.6 NA chr19 21750747 21753438 + 2692 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-420K14.6 NA 0.047 20-30% Testis 1.846631927 Breast_cancer,HCC,Normal NA NA boxplot OR7A1P olfactory receptor family 7 subfamily A member 1 pseudogene chr19 14891895 14892804 - 910 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=OR7A1P NA 0.012 60-70% NA NA Breast_cancer,Normal NA NA boxplot RP3-473L9.4 NA chr12 111369282 111403310 + 34029 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-473L9.4 NA 0.212 70-80% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-394O2.3 NA chr20 46364551 46390885 + 26335 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-394O2.3 NA 0.118 20-30% NA NA HCC,Normal,PAAD NA NA boxplot LINC01072 long intergenic non-protein coding RNA 1072 chr13 20102701 20103230 + 530 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01072 NA 0.012 90-100% Testis 4.906892038 Normal NA NA boxplot DPYD-AS2 DPYD antisense RNA 2 chr1 97796921 97798066 + 1146 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DPYD-AS2 NA 0.012 80-90% Testis 4.625725151 Normal NA NA boxplot CMB9-22P13.1 NA chr11 65455258 65466720 + 11463 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CMB9-22P13.1 exo_circ_016767,exo_circ_050843,exo_circ_041254,exo_circ_040895,exo_circ_041255,exo_circ_036465 0.671 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down) NA boxplot RP1-102E24.6 NA chr12 6477714 6480207 + 2494 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-102E24.6 NA 0.035 40-50% NA NA Breast_cancer,HCC,Normal NA NA boxplot RPL7AP11 ribosomal protein L7a pseudogene 11 chr3 121494110 121494908 + 799 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL7AP11 NA 1 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up),CRC(up),HCC(up) NA boxplot RP11-379C10.4 NA chr9 128090969 128094457 - 3489 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-379C10.4 NA 0.024 90-100% Testis 1.652639781 CRC,PAAD NA NA boxplot RP11-234K19.1 NA chr4 79596542 79597173 + 632 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-234K19.1 NA 0.741 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-274J7.3 NA chr12 63887379 63888598 - 1220 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-274J7.3 NA 0.012 80-90% Thyroid 4.906892038 HCC NA NA boxplot RP11-109E24.2 NA chr4 42657496 42657928 + 433 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-109E24.2 NA 0.047 80-90% Testis 4.214429761 Breast_cancer,CRC,Normal,PAAD NA NA boxplot AC004076.5 NA chr19 57449689 57453011 + 3323 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC004076.5 NA 0.176 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot LINC01397 long intergenic non-protein coding RNA 1397 chr1 110082688 110109719 + 27032 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01397 NA 0.024 10-20% NA NA Breast_cancer,PAAD NA NA boxplot RP11-589C21.5 NA chr8 42151772 42152763 - 992 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-589C21.5 NA 0.059 70-80% Testis 4.906892038 CRC,Normal NA NA boxplot CDC20P1 cell division cycle 20 pseudogene 1 chr9 87011652 87013151 + 1500 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CDC20P1 NA 0.341 40-50% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot CTC-436K13.6 NA chr5 158225352 158234376 - 9025 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-436K13.6 NA 0.059 80-90% NA NA HCC,Normal NA NA boxplot RP11-343J3.2 NA chr10 69575807 69577154 + 1348 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-343J3.2 NA 0.035 60-70% Brain 1.321358801 HCC,Normal NA NA boxplot RP11-500G10.5 NA chr10 130104569 130104998 - 430 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-500G10.5 NA 0.012 50-60% NA NA Normal NA NA boxplot RP11-552M11.8 NA chr1 111431046 111433068 - 2023 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-552M11.8 NA 0.329 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC073342.12 NA chr7 143255264 143287380 - 32117 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC073342.12 NA 0.082 20-30% Testis 2.38016607 HCC,Normal,PAAD NA NA boxplot PCBP1-AS1 PCBP1 antisense RNA 1 chr2 69962263 70103220 - 140958 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PCBP1-AS1 exo_circ_036212,exo_circ_014974,exo_circ_038396,exo_circ_053927,exo_circ_053928 0.976 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot RP11-798G7.8 NA chr17 45531577 45533838 + 2262 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-798G7.8 NA 0.106 70-80% NA NA CRC,HCC,Normal,PAAD NA NA boxplot FAM225A family with sequence similarity 225 member A (non-protein coding) chr9 113113073 113119928 + 6856 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FAM225A NA 0.576 30-40% Testis 3.624014588 Breast_cancer,CHD,CRC,HCC,Normal,PAAD PAAD(up) NA boxplot RP11-388M20.1 NA chr16 31196131 31196963 + 833 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-388M20.1 NA 0.118 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP5-1056H1.2 NA chr20 6065966 6067897 - 1932 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-1056H1.2 NA 0.024 60-70% NA NA Breast_cancer,HCC,Normal NA NA boxplot AC137934.1 NA chr16 90185997 90222678 + 36682 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC137934.1 NA 0.388 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot C2-AS1 C2 antisense RNA 1 chr6 31934474 31941724 - 7251 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=C2-AS1 NA 0.012 90-100% NA NA Breast_cancer NA NA boxplot RP11-586K12.8 NA chr16 32675037 32678831 + 3795 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-586K12.8 NA 0.012 90-100% NA NA Normal NA NA boxplot RP11-266L9.6 NA chr16 25071490 25072727 - 1238 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-266L9.6 NA 0.059 50-60% NA NA Breast_cancer,CRC,Normal NA NA boxplot CTD-2240J17.2 NA chr15 81392759 81393384 + 626 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2240J17.2 NA 0.012 50-60% NA NA NA NA NA boxplot AC069277.2 NA chr3 6490479 6736129 + 245651 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC069277.2 exo_circ_025733 0.271 10-20% Testis 3.155125385 Breast_cancer,CRC,HCC,Normal,PAAD PAAD(up) NA boxplot RP11-592H6.3 NA chr12 5583797 5584085 + 289 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-592H6.3 NA 0.012 0-10% NA NA Normal NA NA boxplot RP11-254I22.1 NA chr5 96050115 96215519 + 165405 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-254I22.1 NA 0.035 70-80% Testis 1.868997918 HCC,Normal NA NA boxplot RP11-1129I3.1 NA chr15 56542952 56629592 - 86641 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1129I3.1 NA 0.106 70-80% Testis 4.59533401 CRC,HCC,PAAD NA NA boxplot LINC01415 long intergenic non-protein coding RNA 1415 chr18 55776727 55781721 - 4995 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01415 NA 0.529 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up) NA boxplot NOC2LP1 NA chr2 130229379 130232106 + 2728 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NOC2LP1 NA 0.494 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP5-991G20.2 NA chr16 72805998 72809872 + 3875 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-991G20.2 NA 0.071 50-60% Testis 1.348870426 CRC,HCC,Normal,PAAD NA NA boxplot CTD-2622I13.3 NA chr19 4061615 4062749 - 1135 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2622I13.3 NA 0.106 40-50% NA NA CRC,Normal,PAAD NA NA boxplot RP11-148E17.1 NA chr14 28936889 29028763 + 91875 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-148E17.1 NA 0.035 80-90% Testis 4.906892038 Breast_cancer,HCC,Normal NA NA boxplot CFAP44-AS1 CFAP44 antisense RNA 1 chr3 113403991 113433992 + 30002 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CFAP44-AS1 NA 0.024 90-100% NA NA CRC NA NA boxplot CTD-2561J22.5 NA chr19 21444241 21463908 - 19668 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2561J22.5 NA 0.765 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),PAAD(down) NA boxplot RP11-384O8.1 NA chr2 222317242 222318653 - 1412 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-384O8.1 NA 0.035 70-80% NA NA Breast_cancer,CRC,PAAD NA NA boxplot AC005519.4 NA chr14 74289127 74294425 - 5299 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC005519.4 NA 0.106 40-50% NA NA Breast_cancer,CRC,Normal,PAAD NA NA boxplot RP11-83J16.1 NA chr15 34943080 34943394 + 315 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-83J16.1 NA 0.682 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-456N14.4 NA chr3 58174478 58178374 - 3897 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-456N14.4 NA 0.012 80-90% NA NA Breast_cancer NA NA boxplot RP11-419C5.2 NA chr16 69976388 69996188 - 19801 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-419C5.2 exo_circ_005401,exo_circ_020466 0.671 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot TMEM220-AS1 TMEM220 antisense RNA 1 chr17 10729777 10815164 + 85388 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TMEM220-AS1 exo_circ_041776 0.341 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot BTF3L4P1 basic transcription factor 3-like 4 pseudogene 1 chr21 17518526 17518993 - 468 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=BTF3L4P1 NA 0.012 90-100% NA NA Normal,PAAD NA NA boxplot RP1-257C22.2 NA chr13 31960325 31961946 - 1622 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-257C22.2 NA 0.035 20-30% NA NA Normal NA NA boxplot FAM170B-AS1 FAM170B antisense RNA 1 chr10 49121839 49151547 + 29709 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FAM170B-AS1 NA 0.024 40-50% Testis 4.859512121 Breast_cancer,HCC,PAAD NA NA boxplot TTC3-AS1 TTC3 antisense RNA 1 chr21 37187666 37193926 - 6261 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TTC3-AS1 NA 0.047 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-359G22.2 NA chr20 22668484 22685344 - 16861 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-359G22.2 NA 0.047 60-70% Testis 4.409644813 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-367E12.4 NA chr8 73984493 73984883 + 391 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-367E12.4 NA 0.141 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot ABCB10P1 ATP binding cassette subfamily B member 10 pseudogene 1 chr15 23179869 23182049 + 2181 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ABCB10P1 NA 0.165 70-80% Testis 4.676775133 Breast_cancer,CHD,CRC,HCC,PAAD NA NA boxplot RP11-338K17.5 NA chr12 123649068 123650485 + 1418 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-338K17.5 NA 0.094 60-70% NA NA Breast_cancer,CRC,Normal,PAAD NA NA boxplot AC008074.4 NA chr2 64486353 64500904 + 14552 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC008074.4 NA 0.047 60-70% Skin 4.160688149 Breast_cancer,HCC,Normal,PAAD NA NA boxplot RP11-74J13.8 NA chr13 41132939 41236686 + 103748 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-74J13.8 NA 0.565 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CTD-2192J16.26 NA chr19 12682693 12687279 - 4587 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2192J16.26 NA 0.035 90-100% NA NA Breast_cancer,CRC NA NA boxplot RP11-927P21.8 NA chr17 64881091 64881181 + 91 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-927P21.8 NA 0.059 80-90% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP4-792G4.3 NA chr1 63359823 63361179 - 1357 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-792G4.3 NA 0.012 80-90% Nerve 4.248245208 Breast_cancer NA NA boxplot RP11-317G6.1 NA chr15 63675146 63713758 + 38613 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-317G6.1 NA 0.659 30-40% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot RP11-454H19.2 NA chr11 40107244 40112599 - 5356 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-454H19.2 NA 0.024 30-40% NA NA Breast_cancer,CRC,Normal NA NA boxplot RP11-454K7.1 NA chr14 45377268 45389286 + 12019 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-454K7.1 NA 0.024 0-10% Testis 1.757145964 CRC,HCC NA NA boxplot CTD-2310F14.1 NA chr5 56927874 56929573 + 1700 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2310F14.1 NA 0.118 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-711K1.8 NA chr12 11212219 11251389 + 39171 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-711K1.8 NA 0.024 50-60% NA NA CRC NA NA boxplot CTD-2134P3.1 NA chr5 28782678 28809249 - 26572 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2134P3.1 NA 0.012 90-100% NA NA Normal NA NA boxplot RP3-431A14.4 NA chr6 36737050 36737986 + 937 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-431A14.4 NA 0.012 80-90% NA NA Breast_cancer,Normal NA NA boxplot RP13-131K19.6 NA chr3 49029316 49029706 + 391 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP13-131K19.6 NA 0.259 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CTD-2186M15.3 NA chr5 32174471 32175272 + 802 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2186M15.3 NA 0.541 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RPS15AP12 ribosomal protein S15a pseudogene 12 chr1 220143964 220144351 - 388 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPS15AP12 NA 0.988 10-20% NA NA CHD,CRC,HCC,Normal,PAAD CHD(up),HCC(up) NA boxplot AC091132.1 NA chr17 45452844 45464065 + 11222 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC091132.1 NA 0.059 40-50% NA NA CRC,HCC NA NA boxplot RP11-49I11.4 NA chr18 36189824 36190272 + 449 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-49I11.4 NA 0.012 90-100% NA NA Breast_cancer,Normal NA NA boxplot DPPA3P1 developmental pluripotency associated 3 pseudogene 1 chrX 103961811 103962279 - 469 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DPPA3P1 NA 0.012 80-90% NA NA CRC NA NA boxplot AP4B1-AS1 AP4B1 antisense RNA 1 chr1 113856635 113901237 + 44603 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AP4B1-AS1 NA 0.459 10-20% NA NA CHD,CRC,HCC,Normal,PAAD CHD(up) NA boxplot RP11-290F5.1 NA chr4 184365183 184382306 - 17124 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-290F5.1 NA 0.247 20-30% Liver 2.58578115 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-120J1.1 NA chr9 14317085 14357908 + 40824 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-120J1.1 NA 0.035 70-80% NA NA Breast_cancer,HCC NA NA boxplot MIR4432HG MIR4432 host gene chr2 60359216 60391375 - 32160 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MIR4432HG exo_circ_048787 0.247 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC093063.2 NA chr19 39693925 39696258 + 2334 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC093063.2 NA 0.012 50-60% NA NA HCC NA NA boxplot CTD-2023N9.3 NA chr5 57614389 57617431 + 3043 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2023N9.3 NA 0.059 50-60% NA NA HCC,Normal,PAAD NA NA boxplot RP1-45N11.1 NA chr6 90345219 90362632 + 17414 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-45N11.1 NA 0.059 50-60% Testis 2.239597117 CRC,HCC,Normal NA NA boxplot PLAC4 placenta specific 4 chr21 41175231 41185239 - 10009 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PLAC4 NA 0.141 10-20% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot C8orf49 chromosome 8 open reading frame 49 chr8 11761256 11763223 + 1968 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=C8orf49 NA 0.071 30-40% Ovary 2.323126792 HCC,Normal NA NA boxplot RP11-707G18.1 NA chr12 25385670 25386241 - 572 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-707G18.1 NA 0.188 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-73M7.6 NA chr1 31644049 31660162 + 16114 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-73M7.6 NA 0.035 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-153K16.2 NA chr12 23181334 23251499 - 70166 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-153K16.2 NA 0.012 60-70% Pituitary 4.906892038 Breast_cancer NA NA boxplot RP11-923I11.5 NA chr12 51848223 51852729 + 4507 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-923I11.5 NA 0.106 50-60% Nerve 1.273187003 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-307C12.11 NA chr1 155045191 155046118 - 928 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-307C12.11 NA 0.282 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP3-448I9.2 NA chr6 14391231 14393288 - 2058 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-448I9.2 NA 0.106 40-50% Testis 4.111376212 CRC,HCC,Normal,PAAD NA NA boxplot RP11-1152H14.1 NA chr2 157917712 157918371 + 660 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1152H14.1 NA 0.153 80-90% NA NA CRC,Normal,PAAD NA NA boxplot RP11-756P10.6 NA chr4 188740507 188741281 - 775 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-756P10.6 NA 0.224 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-759L5.2 NA chrX 16474342 16475340 - 999 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-759L5.2 NA 0.012 80-90% NA NA NA NA NA boxplot PRKCQ-AS1 PRKCQ antisense RNA 1 chr10 6580419 6616452 + 36034 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PRKCQ-AS1 NA 0.976 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-326K13.5 NA chr18 32031035 32031359 + 325 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-326K13.5 NA 0.224 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot SLC6A21P solute carrier family 6 member 21, pseudogene chr19 49255472 49256102 - 631 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SLC6A21P NA 0.012 70-80% NA NA Breast_cancer,HCC NA NA boxplot TEX36-AS1 TEX36 antisense RNA 1 chr10 125574371 125578445 + 4075 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TEX36-AS1 NA 0.012 60-70% NA NA Breast_cancer,PAAD NA NA boxplot CHCHD4P2 coiled-coil-helix-coiled-coil-helix domain containing 4 pseudogene 2 chr9 108097432 108097851 - 420 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CHCHD4P2 NA 0.047 80-90% Testis 4.267135438 Breast_cancer,Normal NA NA boxplot AC005538.3 NA chr2 233865496 233867359 - 1864 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC005538.3 NA 0.576 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-342K6.3 NA chr2 75697583 75697996 + 414 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-342K6.3 NA 0.012 40-50% NA NA CRC NA NA boxplot RP11-87C12.6 NA chr12 121874193 121874337 + 145 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-87C12.6 NA 0.035 40-50% NA NA HCC,Normal NA NA boxplot AP003068.9 NA chr11 65110714 65111695 - 982 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AP003068.9 NA 0.329 20-30% Adrenal Gland 4.906892038 CRC,HCC,Normal,PAAD NA NA boxplot RANP3 RAN, member RAS oncogene family pseudogene 3 chr11 74652636 74652911 + 276 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RANP3 NA 0.059 70-80% NA NA CRC,HCC,PAAD NA NA boxplot RP11-304F15.6 NA chr17 49914403 49932918 + 18516 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-304F15.6 NA 0.012 80-90% NA NA Breast_cancer,PAAD NA NA boxplot TMEM254-AS1 TMEM254 antisense RNA 1 chr10 80046860 80078912 - 32053 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TMEM254-AS1 exo_circ_004704,exo_circ_014203,exo_circ_013371 0.376 30-40% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot HOXA-AS2 HOXA cluster antisense RNA 2 chr7 27107777 27134302 + 26526 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HOXA-AS2 NA 0.541 20-30% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot AC079767.3 NA chr2 207654781 207654951 + 171 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC079767.3 NA 0.012 80-90% NA NA PAAD NA NA boxplot SFTPD-AS1 SFTPD antisense RNA 1 chr10 79968213 79973213 + 5001 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SFTPD-AS1 NA 0.024 80-90% NA NA Breast_cancer,HCC NA NA boxplot CFL1P6 cofilin 1 (non-muscle) pseudogene 6 chr1 10990978 10991797 - 820 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CFL1P6 NA 0.024 70-80% Testis 1.966608156 Breast_cancer,CRC,PAAD NA NA boxplot CCT8P1 chaperonin containing TCP1 subunit 8 pseudogene 1 chr1 147203276 147204932 - 1657 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CCT8P1 NA 0.847 10-20% NA NA CHD,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-235E17.6 NA chr17 3655621 3658092 - 2472 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-235E17.6 NA 0.047 40-50% NA NA Breast_cancer,CRC,HCC,PAAD NA NA boxplot LINC00960 long intergenic non-protein coding RNA 960 chr3 75672391 75679303 + 6913 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00960 NA 0.388 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot NPIPP1 nuclear pore complex interacting protein pseudogene 1 chr16 15104312 15123498 - 19187 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NPIPP1 NA 0.965 10-20% NA NA CHD,CRC,HCC,Normal,PAAD CHD(up) NA boxplot RP11-688G15.3 NA chr14 99512501 99513576 + 1076 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-688G15.3 NA 0.165 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot ZNF519P4 zinc finger protein 519 pseudogene 4 chr4 393534 393658 + 125 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ZNF519P4 NA 0.012 30-40% NA NA Normal NA NA boxplot RP11-582J16.4 NA chr8 22540845 22545405 - 4561 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-582J16.4 NA 0.224 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot RP11-266L9.1 NA chr16 25015978 25021023 + 5046 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-266L9.1 NA 0.094 20-30% Testis 4.34645539 CRC,HCC,Normal NA NA boxplot RP4-621B10.8 NA chr1 92189237 92190707 + 1471 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-621B10.8 NA 0.153 50-60% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot RP11-883G14.3 NA chr16 51035118 51038764 - 3647 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-883G14.3 NA 0.012 10-20% NA NA HCC NA NA boxplot KNOP1P4 lysine-rich nucleolar protein 1 pseudogene 4 chr6 72986313 72987750 + 1438 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KNOP1P4 exo_circ_055241 0.059 90-100% Testis 4.569523346 Breast_cancer,CRC,Normal,PAAD NA NA boxplot AC016831.3 NA chr7 130823205 130823511 - 307 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC016831.3 NA 0.012 20-30% NA NA Normal NA NA boxplot AL157902.3 NA chr1 117596832 117605770 - 8939 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AL157902.3 NA 0.024 90-100% Testis 4.818031169 CRC,Normal,PAAD NA NA boxplot CITF22-49E9.3 NA chr22 49933198 49934074 - 877 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CITF22-49E9.3 NA 0.118 40-50% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot RP4-612C19.1 NA chr1 93190740 93191060 - 321 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-612C19.1 NA 0.012 90-100% Bladder 4.147404562 NA NA NA boxplot LINC01343 long intergenic non-protein coding RNA 1343 chr1 38209034 38214767 - 5734 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01343 NA 0.012 0-10% NA NA Breast_cancer,HCC NA NA boxplot GXYLT1P6 glucoside xylosyltransferase 1 pseudogene 6 chr9 64488600 64489786 + 1187 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GXYLT1P6 NA 0.094 40-50% NA NA HCC,Normal,PAAD NA NA boxplot AC015923.1 NA chr17 63381231 63414312 - 33082 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC015923.1 NA 0.012 30-40% Testis 4.680962656 Normal,PAAD NA NA boxplot RP11-117L5.1 NA chr12 130425004 130430661 + 5658 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-117L5.1 NA 0.012 20-30% NA NA Breast_cancer,HCC NA NA boxplot RP11-284G10.1 NA chr9 115739663 115744239 - 4577 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-284G10.1 NA 0.035 20-30% Testis 4.906892038 PAAD NA NA boxplot RP11-136O12.2 NA chr8 125466939 125541373 + 74435 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-136O12.2 NA 0.035 60-70% Liver 3.126753521 Breast_cancer,HCC,PAAD NA NA boxplot LIFR-AS1 LIFR antisense RNA 1 chr5 38556786 38671216 + 114431 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LIFR-AS1 NA 0.353 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot ARMCX7P armadillo repeat containing, X-linked 7, pseudogene chrX 101597510 101598671 + 1162 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ARMCX7P NA 0.824 60-70% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot RMST rhabdomyosarcoma 2 associated transcript (non-protein coding) chr12 97431653 97565035 + 133383 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RMST exo_circ_022733,exo_circ_034197,exo_circ_000987 0.941 0-10% Thyroid 3.133610297 Breast_cancer,CHD,CRC,HCC,Normal,PAAD CRC(down),HCC(up) NA boxplot AC004637.1 NA chr19 3672582 3674295 + 1714 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC004637.1 NA 0.047 50-60% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot TGFB2-AS1 TGFB2 antisense RNA 1 (head to head) chr1 218344196 218345678 - 1483 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TGFB2-AS1 NA 0.235 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-325P15.2 NA chr1 147082338 147083578 - 1241 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-325P15.2 NA 0.165 70-80% Salivary Gland 3.649487618 CRC,HCC,Normal,PAAD NA NA boxplot SCb-64M4.1 NA chr8 89826593 89833564 + 6972 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SCb-64M4.1 exo_circ_010526 0.012 80-90% NA NA PAAD NA NA boxplot CTC-428H11.2 NA chr5 87376256 87377180 - 925 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-428H11.2 NA 0.682 10-20% NA NA CRC,HCC,Normal,PAAD CHD(down),HCC(down),PAAD(up) NA boxplot RHEBP2 Ras-homolog enriched in brain pseudogene 2 chr10 47706203 47706802 + 600 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RHEBP2 NA 0.929 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down),PAAD(up) NA boxplot DYNLL1P4 dynein, light chain, LC8-type 1 pseudogene 4 chr12 113789542 113789807 - 266 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DYNLL1P4 NA 0.012 70-80% NA NA CRC,HCC NA NA boxplot RAB11B-AS1 RAB11B antisense RNA 1 chr19 8374373 8390685 - 16313 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RAB11B-AS1 NA 0.859 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up),PAAD(up) NA boxplot HNRNPA3P15 heterogeneous nuclear ribonucleoprotein A3 pseudogene 15 chr2 197014990 197016015 + 1026 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HNRNPA3P15 NA 0.024 40-50% NA NA CRC,Normal NA NA boxplot RP11-876N24.2 NA chr16 10864914 10888752 - 23839 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-876N24.2 NA 0.118 30-40% NA NA CRC,HCC,Normal NA NA boxplot AP000679.2 NA chr11 120168977 120171679 + 2703 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AP000679.2 NA 0.012 40-50% Vagina 1.103996939 Breast_cancer,HCC NA NA boxplot RP11-677M14.7 NA chr11 124800450 124834487 + 34038 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-677M14.7 NA 0.6 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down) NA boxplot NPM1P18 nucleophosmin 1 (nucleolar phosphoprotein B23, numatrin) pseudogene 18 chr7 36818959 36819690 + 732 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NPM1P18 NA 0.365 80-90% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot AC067968.3 NA chr19 44023604 44025262 - 1659 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC067968.3 NA 0.012 40-50% Testis 4.906892038 HCC NA NA boxplot UBR5-AS1 UBR5 antisense RNA 1 chr8 102239394 102253333 + 13940 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=UBR5-AS1 NA 0.682 10-20% NA NA CRC,HCC,Normal,PAAD CHD(down),PAAD(down) NA boxplot RP11-530C5.1 NA chr12 79690144 79778451 + 88308 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-530C5.1 NA 0.2 40-50% Testis 2.45045533 Breast_cancer,HCC,Normal,PAAD NA NA boxplot RP5-1125A11.6 NA chr20 33989480 33991818 - 2339 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-1125A11.6 NA 0.188 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot TRIM43CP tripartite motif containing 43C, pseudogene chr2 97025981 97031636 - 5656 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TRIM43CP NA 0.012 80-90% Testis 4.189801536 Breast_cancer,CRC NA NA boxplot RP11-139H15.7 NA chr15 55343141 55343575 - 435 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-139H15.7 NA 0.059 60-70% NA NA CRC,HCC,PAAD NA NA boxplot RP11-379I19.3 NA chr8 59601378 59613775 + 12398 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-379I19.3 NA 0.012 10-20% Testis 4.906892038 PAAD NA NA boxplot ZBTB20-AS4 ZBTB20 antisense RNA 4 chr3 115100423 115103061 + 2639 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ZBTB20-AS4 NA 0.047 0-10% NA NA Breast_cancer,CHD,Normal NA NA boxplot WARS2-IT1 WARS2 intronic transcript 1 chr1 119047405 119064785 + 17381 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=WARS2-IT1 NA 0.012 0-10% NA NA Breast_cancer,Normal NA NA boxplot RP11-611O2.3 NA chr12 68841946 68842384 + 439 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-611O2.3 NA 0.847 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(up),PAAD(up) NA boxplot RP11-546K22.3 NA chr8 51950284 51950690 + 407 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-546K22.3 NA 0.082 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-643M14.1 NA chr15 62060503 62062434 + 1932 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-643M14.1 NA 0.035 70-80% Testis 1.286154363 HCC,Normal NA NA boxplot RP11-281P11.1 NA chr3 104502700 104503266 + 567 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-281P11.1 NA 0.012 20-30% NA NA Breast_cancer,HCC NA NA boxplot CTC-510F12.3 NA chr19 11208195 11208702 + 508 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-510F12.3 NA 0.024 90-100% NA NA HCC NA NA boxplot RP4-737E23.2 NA chr20 23187961 23190307 + 2347 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-737E23.2 NA 0.047 40-50% NA NA Breast_cancer,CRC,Normal NA NA boxplot RRN3P3 RRN3 homolog, RNA polymerase I transcription factor pseudogene 3 chr16 22418672 22437715 - 19044 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RRN3P3 NA 0.953 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up) NA boxplot CTNNAP1 NA chr5 115389643 115392370 - 2728 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTNNAP1 NA 0.059 50-60% Small Intestine 2.985295644 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CTD-2568A17.8 NA chr19 50792685 50793584 - 900 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2568A17.8 NA 0.024 20-30% Testis 4.906892038 Breast_cancer,PAAD NA NA boxplot RP11-359I18.1 NA chr3 58511310 58511676 + 367 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-359I18.1 NA 0.024 70-80% Liver 1.495425432 HCC,Normal NA NA boxplot RP11-10C24.3 NA chr3 33795688 33796950 - 1263 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-10C24.3 NA 0.318 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP1-228P16.4 NA chr12 48011304 48025469 + 14166 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-228P16.4 NA 0.012 90-100% Testis 4.906892038 Breast_cancer,PAAD NA NA boxplot RP11-157H4.1 NA chr13 73844683 73845130 - 448 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-157H4.1 NA 0.035 60-70% NA NA CRC,PAAD NA NA boxplot RP11-485M7.2 NA chr5 133052769 133052971 + 203 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-485M7.2 NA 0.118 70-80% NA NA CRC,HCC,Normal,PAAD NA NA boxplot EPB41L4A-AS2 EPB41L4A antisense RNA 2 (head to head) chr5 112419583 112420978 + 1396 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=EPB41L4A-AS2 NA 0.259 30-40% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot DDX11L9 DEAD/H-box helicase 11 like 9 chr15 101976558 101979093 - 2536 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DDX11L9 NA 0.988 0-10% Testis 4.906892038 Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up),CRC(up),HCC(up),PAAD(up) NA boxplot PABPC1P3 poly(A) binding protein, cytoplasmic 1 pseudogene 3 chrX 74583088 74583546 - 459 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PABPC1P3 NA 0.635 70-80% NA NA CRC,HCC,Normal,PAAD NA NA boxplot MIR3150B microRNA 3150b chr8 95066808 95073182 - 6375 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MIR3150B NA 0.153 40-50% Testis 3.878717496 Breast_cancer,CRC,HCC,Normal NA NA boxplot RP5-843L14.1 NA chr20 56577563 56598621 + 21059 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-843L14.1 NA 0.035 20-30% Testis 4.906892038 Breast_cancer,CRC,PAAD NA NA boxplot RP11-110J1.2 NA chr1 157059232 157060762 - 1531 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-110J1.2 NA 0.824 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-57H12.5 NA chr1 95243167 95278940 - 35774 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-57H12.5 NA 0.024 50-60% NA NA Normal NA NA boxplot RP11-661A12.8 NA chr8 143578358 143583304 + 4947 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-661A12.8 NA 0.929 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down) NA boxplot AC004951.5 NA chr7 43984994 43990207 - 5214 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC004951.5 NA 0.635 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-166N6.2 NA chr3 150890636 151038818 + 148183 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-166N6.2 NA 0.035 80-90% Whole Blood 4.18256567 Breast_cancer,CRC,HCC,Normal NA NA boxplot AC074391.1 NA chr2 65436711 66084639 + 647929 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC074391.1 NA 0.082 60-70% Testis 1.411853723 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP4-758J18.7 NA chr1 1420245 1422691 + 2447 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-758J18.7 NA 0.012 60-70% NA NA Breast_cancer,HCC,Normal NA NA boxplot CTD-2517M22.17 NA chr8 144512567 144513672 + 1106 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2517M22.17 NA 0.082 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC005077.7 NA chr7 76108434 76132187 - 23754 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC005077.7 NA 0.118 50-60% Testis 3.859920571 CRC,HCC,Normal,PAAD NA NA boxplot PRKAR2A-AS1 PRKAR2A antisense RNA 1 chr3 48847572 48851981 + 4410 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PRKAR2A-AS1 NA 0.635 10-20% Testis 1.48774082 Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up) NA boxplot FOXN3P1 forkhead box N3 pseudogene 1 chrX 102546734 102548213 - 1480 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FOXN3P1 NA 0.012 60-70% Testis 4.906892038 Breast_cancer,CRC NA NA boxplot RP11-336A10.2 NA chr10 5712174 5744067 - 31894 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-336A10.2 NA 0.353 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot EIF1AXP2 eukaryotic translation initiation factor 1A, X-linked pseudogene 2 chr14 65528830 65529574 - 745 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=EIF1AXP2 NA 0.012 20-30% NA NA PAAD NA NA boxplot LA16c-425C2.1 NA chr16 1579242 1580308 - 1067 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LA16c-425C2.1 NA 0.047 80-90% NA NA CRC,Normal NA NA boxplot RP11-442O1.3 NA chr16 85142696 85146001 - 3306 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-442O1.3 NA 0.071 50-60% NA NA Breast_cancer,Normal NA NA boxplot RP11-572B2.1 NA chr3 5187172 5188298 - 1127 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-572B2.1 NA 0.259 70-80% NA NA CRC,HCC,Normal,PAAD NA NA boxplot AC026188.1 NA chr3 3250687 3627296 - 376610 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC026188.1 exo_circ_043879 0.082 70-80% NA NA CRC,Normal,PAAD NA NA boxplot RP11-541F9.2 NA chr1 191875495 192011260 + 135766 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-541F9.2 NA 0.635 0-10% Testis 4.906892038 CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down) NA boxplot RP11-374M1.3 NA chr9 61898805 61911022 - 12218 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-374M1.3 NA 0.012 90-100% Testis 4.647708616 NA NA NA boxplot RP11-789C17.1 NA chr18 8402847 8405161 + 2315 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-789C17.1 NA 0.035 30-40% NA NA CRC,HCC NA NA boxplot RP11-1180F24.1 NA chr15 22690454 22691158 - 705 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1180F24.1 NA 0.212 0-10% NA NA CRC,HCC,Normal CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot AC083899.3 NA chr2 87125390 87196647 + 71258 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC083899.3 NA 0.894 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(up),HCC(up),PAAD(up) NA boxplot RP11-365H22.2 NA chr4 51918772 51919381 + 610 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-365H22.2 NA 0.024 70-80% NA NA CRC NA NA boxplot RP11-540K16.1 NA chr1 181174484 181182208 + 7725 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-540K16.1 NA 0.059 80-90% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot RP11-259P20.1 NA chr6 116492297 116497099 + 4803 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-259P20.1 NA 0.424 40-50% Spleen 4.906892038 CRC,HCC,Normal,PAAD NA NA boxplot RP11-253I19.3 NA chr12 12485353 12491581 + 6229 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-253I19.3 NA 0.024 90-100% NA NA CRC,HCC,Normal NA NA boxplot CTD-2526A2.2 NA chr17 80453735 80454729 - 995 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2526A2.2 NA 0.071 50-60% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot PNLIPRP2 pancreatic lipase-related protein 2 chr10 116620953 116645143 + 24191 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PNLIPRP2 NA 0.012 60-70% Pancreas 4.803184899 Breast_cancer,HCC NA NA boxplot RP11-198M15.1 NA chrX 46725164 46725818 - 655 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-198M15.1 NA 0.118 40-50% Cervix 4.906892038 CRC,HCC,Normal,PAAD NA NA boxplot TULP3P1 tubby like protein 3 pseudogene 1 chr13 96947637 96948927 - 1291 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TULP3P1 NA 0.012 80-90% Testis 4.906892038 PAAD NA NA boxplot RP11-627G23.1 NA chr11 134436473 134505661 + 69189 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-627G23.1 exo_circ_050780 0.141 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-680F8.4 NA chr15 29728186 29729531 - 1346 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-680F8.4 NA 0.012 30-40% NA NA Breast_cancer NA NA boxplot RP11-640I15.1 NA chr17 15651590 15654489 + 2900 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-640I15.1 NA 0.024 20-30% NA NA Breast_cancer,PAAD NA NA boxplot RP11-305O6.4 NA chr12 65171262 65171917 + 656 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-305O6.4 exo_circ_051101 0.2 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot DGCR5 DiGeorge syndrome critical region gene 5 (non-protein coding) chr22 18970525 19031242 + 60718 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DGCR5 NA 0.106 0-10% Brain 2.113143558 Breast_cancer,CHD,CRC,HCC,PAAD CHD(up) NA boxplot CTB-131B5.5 NA chr5 140157319 140173051 + 15733 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTB-131B5.5 exo_circ_029772 0.318 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot KANTR KDM5C adjacent non-coding transcript chrX 53094145 53167014 + 72870 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KANTR NA 0.365 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD PAAD(up) NA boxplot bP-2171C21.2 NA chr21 9053122 9059060 + 5939 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=bP-2171C21.2 NA 0.129 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot KRT8P45 keratin 8 pseudogene 45 chr1 157073257 157074703 + 1447 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KRT8P45 NA 0.106 70-80% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot TUBBP1 tubulin beta pseudogene 1 chr8 30351873 30353518 + 1646 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TUBBP1 NA 0.988 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up),HCC(up) NA boxplot RPL7P24 ribosomal protein L7 pseudogene 24 chr5 80500332 80501400 + 1069 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL7P24 NA 0.071 70-80% NA NA CRC,HCC,Normal,PAAD NA NA boxplot ZNF322P1 zinc finger protein 322 pseudogene 1 chr9 97198303 97199511 - 1209 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ZNF322P1 NA 0.871 0-10% NA NA CHD,CRC,HCC,Normal,PAAD CHD(up),CRC(up),HCC(up),PAAD(up) NA boxplot LINC00383 long intergenic non-protein coding RNA 383 chr13 69222346 69292154 + 69809 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00383 NA 0.012 70-80% NA NA PAAD NA NA boxplot RP4-777L9.2 NA chr20 16576068 16579615 + 3548 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-777L9.2 NA 0.024 90-100% NA NA Breast_cancer,PAAD NA NA boxplot HSPE1P11 heat shock protein family E (Hsp10) member 1 pseudogene 11 chr6 35023522 35023831 + 310 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HSPE1P11 NA 0.082 20-30% NA NA CRC,Normal,PAAD NA NA boxplot CTB-31O20.2 NA chr19 1874871 1876169 - 1299 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTB-31O20.2 NA 0.776 10-20% NA NA CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP4-798A10.2 NA chr1 16460948 16468481 + 7534 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-798A10.2 NA 0.365 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-492A10.1 NA chr5 114488997 114668410 - 179414 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-492A10.1 NA 0.047 80-90% Testis 4.906892038 Breast_cancer,HCC,Normal NA NA boxplot RP11-1E4.1 NA chr8 10050485 10054254 - 3770 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1E4.1 NA 0.035 70-80% Testis 2.515669447 CRC,Normal NA NA boxplot AC084290.2 NA chr12 40286289 40286662 + 374 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC084290.2 NA 0.035 70-80% NA NA CRC,Normal NA NA boxplot RP11-927P21.9 NA chr17 64892728 64892845 + 118 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-927P21.9 NA 0.118 70-80% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-331N16.1 NA chr1 242975005 242975084 + 80 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-331N16.1 NA 0.012 80-90% NA NA HCC,PAAD NA NA boxplot MIR4496 microRNA 4496 chr12 108628687 108641318 + 12632 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MIR4496 NA 0.424 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CRC(down),HCC(down),PAAD(down) NA boxplot RP11-85I21.1 NA chr3 67296300 67306359 + 10060 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-85I21.1 NA 0.012 30-40% Testis 4.906892038 CRC NA NA boxplot CTC-548K16.2 NA chr19 14305458 14370196 - 64739 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-548K16.2 NA 0.435 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CTD-2260A17.2 NA chr5 96814028 96935809 - 121782 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2260A17.2 NA 0.776 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),PAAD(down) NA boxplot UNC93B5 unc-93 homolog B5 pseudogene (C. elegans) chr11 67711702 67716005 - 4304 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=UNC93B5 NA 0.024 60-70% NA NA Breast_cancer,CRC,HCC,PAAD NA NA boxplot RP11-703I16.1 NA chr18 12031178 12032181 - 1004 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-703I16.1 NA 0.047 70-80% NA NA HCC,Normal,PAAD NA NA boxplot RP11-455O6.8 NA chr17 81251194 81251803 + 610 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-455O6.8 NA 0.129 70-80% NA NA CRC,HCC,Normal,PAAD NA NA boxplot AC008063.2 NA chr2 162073256 162075169 + 1914 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC008063.2 NA 0.059 20-30% Prostate 1.732138845 HCC,Normal NA NA boxplot LINC01002 long intergenic non-protein coding RNA 1002 chr19 198264 239440 - 41177 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01002 NA 0.718 30-40% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CRC(up) NA boxplot RPL21P123 ribosomal protein L21 pseudogene 123 chr17 29716279 29716685 - 407 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL21P123 NA 0.176 40-50% NA NA CRC,Normal,PAAD NA NA boxplot RP11-192H23.7 NA chr17 28633206 28635950 + 2745 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-192H23.7 NA 0.494 40-50% Testis 1.055324092 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-69I8.3 NA chr6 131950946 132077393 + 126448 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-69I8.3 NA 0.329 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot WI2-80269A6.1 NA chrX 151497726 151498354 + 629 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=WI2-80269A6.1 NA 0.024 60-70% NA NA Breast_cancer,CRC,Normal NA NA boxplot MAPK6PS4 mitogen-activated protein kinase 6 pseudogene 4 chr8 46972476 46974617 - 2142 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MAPK6PS4 NA 0.082 90-100% Testis 4.206798218 HCC,Normal NA NA boxplot RP11-264E20.1 NA chr11 128615867 128621806 - 5940 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-264E20.1 NA 0.082 60-70% NA NA Breast_cancer,CRC,Normal,PAAD NA NA boxplot RP1-310O13.13 NA chr20 31970181 31970831 + 651 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-310O13.13 NA 0.012 90-100% NA NA Normal NA NA boxplot MBL1P mannose-binding lectin (protein A) 1, pseudogene chr10 79904898 79950336 + 45439 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MBL1P NA 0.094 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RPS3AP23 ribosomal protein S3a pseudogene 23 chr6 141635650 141636503 - 854 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPS3AP23 exo_circ_055112,exo_circ_055113,exo_circ_044403 0.012 50-60% NA NA NA NA NA boxplot AC138035.2 NA chr5 181306502 181324685 + 18184 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC138035.2 NA 0.871 10-20% NA NA CRC,HCC,Normal,PAAD CRC(up),HCC(up),PAAD(up) NA boxplot CTB-50L17.5 NA chr19 4429689 4430934 - 1246 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTB-50L17.5 NA 0.012 80-90% NA NA Breast_cancer,HCC NA NA boxplot RP11-66B24.1 NA chr15 100861843 100874369 + 12527 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-66B24.1 NA 0.024 10-20% Salivary Gland 1.34169559 Breast_cancer,PAAD NA NA boxplot RP11-78I14.1 NA chr2 36513255 36513732 - 478 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-78I14.1 NA 0.082 90-100% NA NA HCC,Normal,PAAD NA NA boxplot CTC-241N9.1 NA chr5 179859013 179861283 + 2271 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-241N9.1 NA 0.247 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP13-638C3.4 NA chr17 82602989 82604178 - 1190 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP13-638C3.4 NA 0.341 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot GS1-259H13.7 NA chr7 99638242 99638767 - 526 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GS1-259H13.7 NA 0.024 80-90% NA NA Normal NA NA boxplot RP11-713M15.2 NA chr8 120812219 120813359 + 1141 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-713M15.2 NA 0.588 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CTC-439O9.1 NA chr19 31364297 31366098 + 1802 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-439O9.1 NA 0.024 60-70% NA NA Breast_cancer,PAAD NA NA boxplot RP11-567M16.6 NA chr18 79677287 79679358 - 2072 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-567M16.6 NA 0.388 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot ST20-AS1 ST20 antisense RNA 1 chr15 79922771 79926993 + 4223 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ST20-AS1 NA 0.788 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up) NA boxplot RP11-149I23.3 NA chr10 89283765 89292125 + 8361 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-149I23.3 NA 0.059 40-50% NA NA Normal,PAAD NA NA boxplot EEF1DP8 eukaryotic translation elongation factor 1 delta pseudogene 8 chr11 62169293 62169828 + 536 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=EEF1DP8 NA 0.024 20-30% NA NA Breast_cancer,Normal,PAAD NA NA boxplot LINC00355 long intergenic non-protein coding RNA 355 chr13 63986371 64076011 - 89641 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00355 exo_circ_028522 0.235 0-10% Testis 4.906892038 Breast_cancer,CRC,HCC,Normal,PAAD CRC(up) NA boxplot CH507-154B10.2 NA chr21 6986450 6997765 - 11316 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CH507-154B10.2 NA 0.224 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot AC002310.7 NA chr16 30572250 30583860 + 11611 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC002310.7 NA 0.212 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-109D20.2 NA chr15 45073492 45074048 - 557 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-109D20.2 NA 0.188 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-693J15.5 NA chr12 92466451 92492091 + 25641 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-693J15.5 NA 0.906 0-10% Spleen 2.801545973 Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),HCC(down),PAAD(down) NA boxplot AC007563.4 NA chr2 216785774 216786144 - 371 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC007563.4 NA 0.024 10-20% NA NA Normal NA NA boxplot NSUN5P2 NOP2/Sun RNA methyltransferase family member 5 pseudogene 2 chr7 72947581 72954790 - 7210 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NSUN5P2 NA 0.847 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CRC(up) NA boxplot HCG24 HLA complex group 24 (non-protein coding) chr6 33144783 33147767 + 2985 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HCG24 NA 0.012 20-30% Brain 4.560863884 CRC NA NA boxplot HSPA8P4 heat shock protein family A (Hsp70) member 8 pseudogene 4 chr5 130140031 130141950 + 1920 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HSPA8P4 NA 0.047 20-30% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot LINC01270 long intergenic non-protein coding RNA 1270 chr20 50292720 50314922 + 22203 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01270 NA 0.412 20-30% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up) NA boxplot LINC00562 long intergenic non-protein coding RNA 562 chr13 47930153 47932622 - 2470 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00562 NA 0.129 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-399K21.13 NA chr10 75408973 75409326 - 354 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-399K21.13 NA 0.012 80-90% NA NA Breast_cancer NA NA boxplot AL133243.4 NA chr2 32563328 32566436 + 3109 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AL133243.4 NA 0.165 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot U91328.21 NA chr6 25983812 25999167 - 15356 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=U91328.21 NA 0.294 0-10% NA NA HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot LINC00266-2P long intergenic non-protein coding RNA 266-2, pseudogene chrY 24278681 24291346 + 12666 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00266-2P NA 0.012 90-100% NA NA CHD,PAAD NA NA boxplot RP11-524C21.1 NA chr6 22213306 22214237 - 932 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-524C21.1 NA 0.012 90-100% Ovary 1.866313075 HCC NA NA boxplot KRT17P6 keratin 17 pseudogene 6 chr17 20512560 20517479 - 4920 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KRT17P6 NA 0.047 80-90% NA NA Breast_cancer,CRC,Normal,PAAD NA NA boxplot AP001604.3 NA chr21 27358885 27448579 - 89695 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AP001604.3 NA 0.4 30-40% Spleen 4.084005338 CRC,HCC,Normal,PAAD NA NA boxplot RP11-16B9.1 NA chr15 61834752 61852152 + 17401 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-16B9.1 NA 0.012 80-90% Testis 4.906892038 HCC NA NA boxplot RP13-516M14.10 NA chr17 82244770 82245591 + 822 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP13-516M14.10 NA 0.271 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-63G10.3 NA chr1 58812808 58813342 - 535 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-63G10.3 NA 0.012 80-90% NA NA NA NA NA boxplot RP11-514A9.1 NA chr2 144877734 144882033 - 4300 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-514A9.1 NA 0.012 30-40% Testis 4.906892038 CRC NA NA boxplot CTD-2319I12.3 NA chr17 60113793 60120687 - 6895 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2319I12.3 NA 0.012 40-50% NA NA Breast_cancer NA NA boxplot RP11-291L22.9 NA chr10 38403189 38452153 + 48965 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-291L22.9 NA 0.729 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CRC(up) NA boxplot RP11-274B18.4 NA chr9 68541036 68644442 + 103407 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-274B18.4 NA 0.024 40-50% Kidney 2.719013566 Breast_cancer,HCC,Normal NA NA boxplot RP11-368I7.6 NA chr16 89684642 89685304 + 663 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-368I7.6 NA 0.012 80-90% NA NA NA NA NA boxplot GPS2P1 G protein pathway suppressor 2 pseudogene 1 chr9 2875442 2876427 - 986 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GPS2P1 NA 0.035 70-80% NA NA Breast_cancer,HCC,Normal NA NA boxplot PWWP2AP1 PWWP domain containing 2A pseudogene 1 chr13 80654755 80657027 + 2273 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PWWP2AP1 exo_circ_034259,exo_circ_002074,exo_circ_037530,exo_circ_028537 0.082 40-50% Testis 4.790776786 Breast_cancer,CRC,HCC,Normal NA NA boxplot RP11-433J8.2 NA chr14 96741191 96790613 + 49423 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-433J8.2 NA 0.012 20-30% Testis 4.199446518 Breast_cancer,PAAD NA NA boxplot RP11-977G19.11 NA chr12 56300142 56314808 + 14667 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-977G19.11 NA 0.635 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot PAXBP1-AS1 PAXBP1 antisense RNA 1 chr21 32728115 32743122 + 15008 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PAXBP1-AS1 NA 0.624 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CRC(up) NA boxplot RP11-115N4.1 NA chr7 91311368 91515409 + 204042 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-115N4.1 NA 0.047 60-70% NA NA Breast_cancer,CRC,HCC,PAAD NA NA boxplot RP11-120K18.3 NA chr16 31361278 31361695 - 418 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-120K18.3 NA 0.012 20-30% Whole Blood 3.45291902 Breast_cancer,Normal NA NA boxplot HMGA1P4 high mobility group AT-hook 1 pseudogene 4 chr9 128663134 128663578 - 445 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HMGA1P4 NA 0.412 30-40% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot CTC-806A22.1 NA chr5 145337932 145381670 - 43739 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-806A22.1 exo_circ_054791,exo_circ_008900,exo_circ_054794,exo_circ_044194,exo_circ_044192 0.012 40-50% NA NA HCC,Normal NA NA boxplot CTD-3099C6.7 NA chr19 52575883 52585561 - 9679 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-3099C6.7 NA 0.141 60-70% NA NA HCC,Normal,PAAD NA NA boxplot CTD-2568P8.1 NA chr14 60323236 60323907 + 672 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2568P8.1 exo_circ_017006,exo_circ_005168 0.059 70-80% Testis 4.906892038 CRC,HCC,PAAD NA NA boxplot RP11-284F21.7 NA chr1 156646507 156661424 - 14918 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-284F21.7 NA 0.376 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot LINC00920 long intergenic non-protein coding RNA 920 chr16 66408524 66412135 + 3612 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00920 NA 0.671 10-20% NA NA CHD,CRC,HCC,Normal,PAAD CRC(down) NA boxplot MTRF1LP1 mitochondrial translational release factor 1 like pseudogene 1 chr11 113711720 113712398 + 679 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MTRF1LP1 NA 0.2 80-90% NA NA CRC,HCC,Normal,PAAD NA NA boxplot LINC00898 long intergenic non-protein coding RNA 898 chr22 47621043 47631569 - 10527 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00898 NA 0.024 90-100% Testis 4.64364986 Breast_cancer,PAAD NA NA boxplot AC096579.13 NA chr2 88811186 88825207 - 14022 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC096579.13 NA 0.012 20-30% NA NA Breast_cancer,PAAD NA NA boxplot AC009052.12 NA chr16 57461055 57462737 + 1683 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC009052.12 NA 0.576 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CT45A11P cancer/testis antigen family 45, member A11, pseudogene chrX 135942478 135947139 - 4662 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CT45A11P NA 0.341 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot FLJ26850 FLJ26850 protein chr19 50050589 50066793 + 16205 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FLJ26850 NA 0.012 70-80% NA NA Breast_cancer NA NA boxplot KB-1572G7.2 NA chr22 23652860 23717347 - 64488 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KB-1572G7.2 NA 0.788 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD PAAD(up) NA boxplot CTD-2026D20.2 NA chr17 47409322 47423526 - 14205 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2026D20.2 NA 0.294 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot ASS1P12 argininosuccinate synthetase 1 pseudogene 12 chr9 32945996 32947222 + 1227 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ASS1P12 NA 0.024 80-90% NA NA Breast_cancer,HCC,Normal NA NA boxplot L3MBTL4-AS1 L3MBTL4 antisense RNA 1 chr18 6256747 6260934 + 4188 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=L3MBTL4-AS1 NA 0.376 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot NUTM2A-AS1 NUTM2A antisense RNA 1 chr10 87203875 87342612 - 138738 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NUTM2A-AS1 NA 0.988 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down) NA boxplot FRG1CP FSHD region gene 1 family member C, pseudogene chr20 28580709 28602664 - 21956 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FRG1CP NA 0.918 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-793H13.11 NA chr12 53500162 53500936 - 775 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-793H13.11 NA 0.176 70-80% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-135A1.3 NA chr3 194091561 194109174 + 17614 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-135A1.3 NA 0.035 20-30% Testis 4.906892038 HCC,Normal NA NA boxplot LA16c-358B7.4 NA chr16 1305547 1309413 - 3867 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LA16c-358B7.4 NA 0.012 90-100% NA NA Breast_cancer,CRC NA NA boxplot RP11-867G23.3 NA chr11 66269832 66278525 - 8694 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-867G23.3 NA 0.388 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP4-751H13.7 NA chr7 149858400 149862492 - 4093 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-751H13.7 NA 0.224 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot ITPK1-AS1 ITPK1 antisense RNA 1 chr14 93067452 93072152 + 4701 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ITPK1-AS1 NA 0.012 80-90% NA NA Breast_cancer,HCC NA NA boxplot AMMECR1-IT1 AMMECR1 intronic transcript 1 chrX 110305420 110307221 - 1802 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AMMECR1-IT1 NA 0.012 80-90% NA NA NA NA NA boxplot RP11-299G20.5 NA chr15 101299656 101301648 - 1993 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-299G20.5 NA 0.8 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(up),PAAD(up) NA boxplot RP11-325N19.3 NA chr15 39921042 39925880 + 4839 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-325N19.3 NA 0.024 60-70% Testis 4.637200518 Breast_cancer,CRC NA NA boxplot GUSBP8 glucuronidase, beta pseudogene 8 chr5 99532628 99534611 + 1984 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GUSBP8 NA 0.024 80-90% Testis 4.906892038 Breast_cancer,HCC,Normal NA NA boxplot RP11-292F9.1 NA chr9 41760088 41764175 + 4088 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-292F9.1 NA 0.071 70-80% Spleen 3.320146184 HCC NA NA boxplot AC007319.1 NA chr2 187003220 187554663 + 551444 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC007319.1 NA 0.518 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-927P21.2 NA chr17 64899766 64900716 + 951 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-927P21.2 NA 0.024 70-80% NA NA CRC,PAAD NA NA boxplot RP11-566F5.1 NA chr10 109680442 109681041 + 600 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-566F5.1 NA 0.6 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP1-193H18.3 NA chr17 69477139 69501755 - 24617 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-193H18.3 NA 0.024 60-70% NA NA CRC,HCC NA NA boxplot RP1-198K11.5 NA chr20 21302731 21303704 - 974 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-198K11.5 NA 0.541 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-141J10.1 NA chr9 70708047 70712863 + 4817 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-141J10.1 NA 0.047 90-100% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-613M10.6 NA chr9 37509150 37510299 + 1150 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-613M10.6 NA 0.365 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC108004.2 NA chr17 183824 191587 - 7764 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC108004.2 NA 0.035 40-50% Testis 2.8706255 Breast_cancer,HCC,Normal NA NA boxplot AC005307.1 NA chr19 28418483 28429490 - 11008 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC005307.1 NA 0.106 80-90% Pancreas 4.275925617 CRC,HCC,Normal NA NA boxplot LINC00323 long intergenic non-protein coding RNA 323 chr21 41141493 41148133 - 6641 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00323 NA 0.094 50-60% Brain 1.088986834 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC108142.1 NA chr4 181874438 182145249 - 270812 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC108142.1 NA 0.024 20-30% NA NA Breast_cancer,PAAD NA NA boxplot RP11-885B4.1 NA chr12 2695765 2812902 - 117138 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-885B4.1 NA 0.318 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-127I20.7 NA chr16 4730115 4752565 - 22451 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-127I20.7 NA 0.024 90-100% NA NA Breast_cancer,HCC NA NA boxplot AC010642.2 NA chr19 58319277 58320489 + 1213 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC010642.2 NA 0.012 90-100% NA NA Breast_cancer NA NA boxplot MTND1P32 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 1 pseudogene 32 chrX 102785667 102786604 + 938 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MTND1P32 NA 0.035 30-40% NA NA CRC,PAAD NA NA boxplot PTGER4P3 prostaglandin E receptor 4 pseudogene 3 chr9 63775892 63776143 - 252 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PTGER4P3 NA 0.035 80-90% Spleen 4.560215671 Breast_cancer,CHD,CRC,HCC NA NA boxplot HNRNPA3P3 heterogeneous nuclear ribonucleoprotein A3 pseudogene 3 chrX 140032344 140033480 + 1137 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HNRNPA3P3 NA 0.541 70-80% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-671E7.1 NA chr10 45725694 45726038 - 345 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-671E7.1 NA 0.035 40-50% NA NA Breast_cancer,CRC,HCC NA NA boxplot RP4-668J24.2 NA chr6 1383790 1385066 - 1277 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-668J24.2 NA 0.024 40-50% Esophagus 1.86592541 Breast_cancer,PAAD NA NA boxplot AC004156.3 NA chr19 663482 669500 + 6019 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC004156.3 NA 0.012 10-20% NA NA Breast_cancer,Normal NA NA boxplot AC072052.7 NA chr7 6490793 6491098 - 306 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC072052.7 NA 0.024 60-70% NA NA PAAD NA NA boxplot ALG1L5P asparagine-linked glycosylation 1-like 5, pseudogene chr7 6923804 6930835 + 7032 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ALG1L5P NA 0.012 90-100% Testis 4.906892038 Breast_cancer,Normal NA NA boxplot LINC01128 long intergenic non-protein coding RNA 1128 chr1 825138 859446 + 34309 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01128 NA 0.976 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP3-462C17.1 NA chr6 40516336 40523933 - 7598 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-462C17.1 NA 0.035 40-50% Testis 4.906892038 CRC,HCC,Normal NA NA boxplot RP5-998N21.4 NA chr1 143877731 143885076 - 7346 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-998N21.4 NA 0.024 20-30% NA NA HCC,Normal NA NA boxplot RP11-12M5.4 NA chr1 179829609 179836124 - 6516 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-12M5.4 NA 0.059 50-60% Testis 2.83828244 CRC,Normal,PAAD NA NA boxplot NRBF2P4 nuclear receptor binding factor 2 pseudogene 4 chr8 107983116 107983965 + 850 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NRBF2P4 NA 0.129 80-90% NA NA Breast_cancer,HCC,Normal NA NA boxplot FABP5P11 fatty acid binding protein 5 pseudogene 11 chr22 16595089 16595485 - 397 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FABP5P11 NA 0.012 90-100% NA NA HCC,PAAD NA NA boxplot RP11-239L20.6 NA chr6 27001208 27001648 - 441 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-239L20.6 NA 0.012 70-80% NA NA NA NA NA boxplot RP11-102C16.3 NA chr1 167052551 167058542 + 5992 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-102C16.3 NA 0.012 50-60% Testis 4.622138644 CRC,Normal NA NA boxplot SLFNL1-AS1 SLFNL1 antisense RNA 1 chr1 41014590 41043890 + 29301 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SLFNL1-AS1 NA 0.235 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD PAAD(up) NA boxplot AC067945.3 NA chr2 190992639 190993567 - 929 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC067945.3 NA 0.129 20-30% NA NA CRC,HCC,Normal NA NA boxplot AC060834.2 NA chr7 9726241 9728272 + 2032 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC060834.2 NA 0.082 60-70% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot RP11-480D4.4 NA chr5 8455946 8456558 - 613 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-480D4.4 NA 0.012 80-90% Testis 4.233232182 CRC NA NA boxplot RP11-268P4.6 NA chr12 22638464 22638943 + 480 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-268P4.6 NA 0.012 50-60% NA NA CRC NA NA boxplot RPL23AP15 ribosomal protein L23a pseudogene 15 chr1 228449163 228449621 - 459 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL23AP15 NA 0.012 10-20% NA NA PAAD NA NA boxplot SPDYE11 speedy/RINGO cell cycle regulator family member E11 chr7 73048055 73057911 - 9857 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SPDYE11 NA 0.024 70-80% NA NA HCC,Normal,PAAD NA NA boxplot GOLGA6L3 golgin A6 family-like 3 chr15 85240472 85247170 + 6699 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GOLGA6L3 NA 0.529 70-80% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot AC005618.6 NA chr5 141326210 141329357 + 3148 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC005618.6 NA 0.059 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot AC002984.2 NA chr19 36173406 36173853 - 448 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC002984.2 NA 0.012 80-90% NA NA HCC NA NA boxplot RP11-345J18.2 NA chr15 25708470 25710869 - 2400 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-345J18.2 NA 0.271 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot LINC01597 long intergenic non-protein coding RNA 1597 chr20 30278906 30288479 - 9574 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01597 NA 0.176 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RAD23BLP RAD23 homolog B-like (S. cerevisiae) pseudogene chr21 15694300 15696581 - 2282 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RAD23BLP NA 0.012 30-40% NA NA HCC NA NA boxplot RP11-284F21.9 NA chr1 156637783 156641004 - 3222 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-284F21.9 NA 0.059 30-40% Small Intestine 1.029681011 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC083843.4 NA chr8 134783694 134785879 - 2186 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC083843.4 NA 0.024 20-30% NA NA Normal NA NA boxplot RP11-122M14.1 NA chr1 211675762 211690103 + 14342 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-122M14.1 NA 0.035 20-30% Testis 3.959182226 Breast_cancer,HCC,Normal NA NA boxplot PCDHGB9P protocadherin gamma subfamily B, 9 pseudogene chr5 141439853 141442449 + 2597 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PCDHGB9P NA 0.082 60-70% NA NA Breast_cancer,CRC,HCC NA NA boxplot AL121578.7 NA chrX 37994344 37994790 + 447 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AL121578.7 NA 0.012 90-100% Testis 4.782613716 Breast_cancer,PAAD NA NA boxplot MTCYBP23 MT-CYB pseudogene 23 chr15 58154960 58156061 + 1102 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MTCYBP23 NA 0.082 20-30% NA NA CRC,HCC,Normal NA NA boxplot RPL19P14 ribosomal protein L19 pseudogene 14 chr8 98782055 98782628 + 574 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL19P14 NA 0.012 10-20% NA NA CRC NA NA boxplot DFFBP1 DNA fragmentation factor, 40kDa, beta polypeptide pseudogene 1 chr9 32566148 32567126 - 979 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DFFBP1 NA 0.224 10-20% NA NA CHD,CRC,HCC,Normal,PAAD CHD(up) NA boxplot LAGE3P1 L antigen family member 3 pseudogene 1 chr9 33019682 33020165 - 484 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LAGE3P1 NA 0.059 50-60% NA NA CRC,Normal,PAAD NA NA boxplot RP11-284F21.10 NA chr1 156641666 156644887 - 3222 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-284F21.10 NA 0.447 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD PAAD(up) NA boxplot RP11-161D15.3 NA chr4 173924207 173990861 - 66655 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-161D15.3 NA 0.012 80-90% NA NA HCC NA NA boxplot RP11-155D18.13 NA chr3 51951849 51953902 - 2054 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-155D18.13 NA 0.071 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AP000892.4 NA chr11 117316362 117328038 - 11677 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AP000892.4 NA 0.024 70-80% Testis 1.999458212 Normal NA NA boxplot CTD-2165H16.4 NA chr5 14661808 14664604 - 2797 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2165H16.4 NA 0.071 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-496N12.6 NA chr1 225447243 225465343 - 18101 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-496N12.6 NA 0.341 30-40% Colon 1.497648917 CRC,HCC,Normal,PAAD NA NA boxplot RP11-1017G21.4 NA chr14 102036315 102066228 - 29914 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1017G21.4 NA 0.459 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CTD-2363C16.1 NA chr5 158983006 158984789 + 1784 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2363C16.1 NA 0.024 0-10% Testis 3.826185975 Normal NA NA boxplot RP11-554J4.1 NA chr2 55617909 55618373 + 465 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-554J4.1 NA 0.447 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot LINC00488 long intergenic non-protein coding RNA 488 chr3 109178165 109185257 + 7093 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00488 NA 0.012 60-70% NA NA Breast_cancer NA NA boxplot ADORA2A-AS1 ADORA2A antisense RNA 1 chr22 24429206 24495074 - 65869 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ADORA2A-AS1 NA 0.071 50-60% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot PCMTD1P7 protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1 pseudogene 7 chr20 29321310 29321666 - 357 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PCMTD1P7 NA 0.012 90-100% NA NA CRC NA NA boxplot RP11-54O7.1 NA chr1 911435 914948 + 3514 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-54O7.1 NA 0.082 10-20% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot AC156455.1 NA chr12 122063306 122068616 + 5311 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC156455.1 NA 0.118 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot UGT1A13P UDP glucuronosyltransferase 1 family, polypeptide A13 pseudogene chr2 233647926 233649026 + 1101 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=UGT1A13P NA 0.024 10-20% NA NA Breast_cancer,PAAD NA NA boxplot RP11-64D22.1 NA chr3 151759747 151762011 - 2265 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-64D22.1 NA 0.024 90-100% Skin 4.462848798 CRC NA NA boxplot RP13-20L14.10 NA chr17 82462601 82464255 + 1655 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP13-20L14.10 NA 0.2 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot HNRNPA1P7 heterogeneous nuclear ribonucleoprotein A1 pseudogene 7 chr18 32412214 32413176 - 963 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HNRNPA1P7 NA 1 0-10% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot MIRLET7DHG MIRLET7D host gene chr9 94176602 94204568 - 27967 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MIRLET7DHG NA 0.024 80-90% Testis 4.906892038 HCC,Normal NA NA boxplot RP11-449J21.5 NA chr17 76140556 76154650 + 14095 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-449J21.5 NA 0.4 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC022007.5 NA chr3 10006418 10011209 - 4792 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC022007.5 NA 0.541 30-40% Testis 1.665703337 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC005754.7 NA chr5 141100242 141174391 - 74150 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC005754.7 NA 0.024 90-100% Testis 4.247787439 HCC NA NA boxplot RPARP-AS1 RPARP antisense RNA 1 chr10 102449817 102461106 + 11290 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPARP-AS1 NA 0.965 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot ODCP ornithine decarboxylase pseudogene chr7 129028889 129030527 + 1639 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ODCP NA 0.094 10-20% NA NA HCC,Normal,PAAD NA NA boxplot GOLGA8VP golgin A8 family member V, pseudogene chr15 101771758 101781989 - 10232 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GOLGA8VP NA 0.012 20-30% NA NA Breast_cancer,Normal NA NA boxplot MYH16 myosin, heavy chain 16 pseudogene chr7 99238794 99311130 + 72337 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MYH16 NA 0.047 20-30% Testis 3.048571629 Breast_cancer,HCC,Normal,PAAD NA NA boxplot LINC00641 long intergenic non-protein coding RNA 641 chr14 21200079 21206900 - 6822 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00641 NA 0.588 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CRC(up),PAAD(up) NA boxplot UBE2FP1 ubiquitin conjugating enzyme E2F (putative) pseudogene 1 chr3 37143512 37143958 - 447 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=UBE2FP1 NA 0.482 10-20% NA NA CHD,CRC,HCC,Normal,PAAD CHD(up) NA boxplot RHOXF1P1 Rhox homeobox family member 1 pseudogene 1 chrX 120010718 120015544 - 4827 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RHOXF1P1 NA 0.247 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-45A12.1 NA chr11 44694863 44696301 - 1439 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-45A12.1 NA 0.518 10-20% Fallopian Tube 4.037004207 CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down) NA boxplot ADAMTS7P4 ADAMTS7 pseudogene 4 chr15 85255369 85330334 - 74966 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ADAMTS7P4 NA 0.659 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot RP11-210M15.2 NA chr15 80344853 80403575 - 58723 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-210M15.2 NA 0.271 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC079250.1 NA chr2 47690716 47691246 - 531 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC079250.1 NA 0.929 10-20% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(down) NA boxplot RP11-203M5.8 NA chr14 20474789 20477089 - 2301 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-203M5.8 NA 0.447 20-30% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot LINC01115 long intergenic non-protein coding RNA 1115 chr2 779840 868426 - 88587 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01115 NA 0.059 60-70% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot VN2R1P vomeronasal 2 receptor 1 pseudogene chr3 156019646 156037647 + 18002 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=VN2R1P NA 0.012 90-100% Testis 4.906892038 NA NA NA boxplot ALDOAP1 aldolase, fructose-bisphosphate A pseudogene 1 chr3 52193170 52194785 + 1616 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ALDOAP1 NA 0.012 90-100% NA NA Breast_cancer NA NA boxplot AC000095.9 NA chr22 19018043 19018916 - 874 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC000095.9 NA 0.071 50-60% NA NA Breast_cancer,CRC,PAAD NA NA boxplot LINC01232 long intergenic non-protein coding RNA 1232 chr13 99486962 99499306 - 12345 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01232 NA 0.882 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-161I6.2 NA chr18 1883524 2240847 - 357324 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-161I6.2 NA 0.047 40-50% Testis 3.530358804 CRC,HCC,PAAD NA NA boxplot RP11-97C16.1 NA chr3 3152942 3153435 + 494 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-97C16.1 NA 0.471 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot AC021188.4 NA chr2 96307263 96321731 - 14469 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC021188.4 NA 0.541 10-20% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-429K17.1 NA chr16 20385957 20391164 + 5208 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-429K17.1 NA 0.012 60-70% Testis 4.906892038 HCC NA NA boxplot RP11-20I20.4 NA chr4 1167778 1168174 + 397 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-20I20.4 NA 0.071 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot LINC00426 long intergenic non-protein coding RNA 426 chr13 30340270 30377145 - 36876 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00426 NA 0.894 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-190A12.9 NA chr1 159910094 159910554 - 461 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-190A12.9 NA 0.047 90-100% NA NA Breast_cancer,CRC,Normal NA NA boxplot AC023347.1 NA chr2 126308510 126343992 + 35483 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC023347.1 NA 0.024 80-90% Testis 4.906892038 Normal NA NA boxplot BMS1P1 NA chr10 46786674 46811989 + 25316 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=BMS1P1 NA 0.929 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP3-468K18.6 NA chr6 143858062 143858689 - 628 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-468K18.6 NA 0.012 90-100% NA NA HCC NA NA boxplot NF1P8 neurofibromin 1 pseudogene 8 chr2 131189834 131197493 - 7660 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NF1P8 NA 0.353 20-30% Testis 4.906892038 CRC,HCC,Normal,PAAD NA NA boxplot CTC-461F20.1 NA chr5 16617225 16621276 + 4052 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-461F20.1 NA 0.024 80-90% Testis 2.784739097 Breast_cancer,CRC,Normal NA NA boxplot RP4-678D15.1 NA chr20 53255979 53487274 - 231296 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-678D15.1 NA 0.224 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-395A13.2 NA chr2 127886556 127887185 + 630 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-395A13.2 NA 0.706 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-398K22.12 NA chr6 73263215 73301401 + 38187 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-398K22.12 NA 0.588 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-442H21.2 NA chr10 72274915 72275980 - 1066 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-442H21.2 NA 0.553 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot RP5-1159O4.2 NA chr7 7550104 7552440 - 2337 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-1159O4.2 NA 0.071 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-1259L22.2 NA chr5 178344843 178345316 + 474 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1259L22.2 NA 0.012 20-30% Liver 4.825564338 HCC NA NA boxplot RPSAP18 ribosomal protein SA pseudogene 18 chr1 160266340 160267225 - 886 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPSAP18 NA 0.776 50-60% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-7F17.8 NA chr14 77028086 77031572 + 3487 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-7F17.8 NA 0.894 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot COX7BP1 cytochrome c oxidase subunit VIIb pseudogene 1 chr22 35194699 35194942 - 244 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=COX7BP1 NA 0.024 90-100% Testis 4.906892038 CRC NA NA boxplot CTD-2561B21.3 NA chr17 80960766 80961713 - 948 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2561B21.3 NA 0.012 10-20% NA NA Breast_cancer,PAAD NA NA boxplot RPL7P47 ribosomal protein L7 pseudogene 47 chr16 17932720 17933275 + 556 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL7P47 NA 0.024 90-100% NA NA CHD,HCC,Normal NA NA boxplot RP11-286H15.1 NA chr2 127625997 127626848 - 852 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-286H15.1 NA 0.047 30-40% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot RP11-148O21.6 NA chr8 11552488 11552991 - 504 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-148O21.6 NA 0.012 50-60% NA NA Normal NA NA boxplot NPPA-AS1 NPPA antisense RNA 1 chr1 11841017 11848079 + 7063 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NPPA-AS1 exo_circ_030418 0.835 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),HCC(down) NA boxplot RP1-168P16.2 NA chr16 89392375 89412564 - 20190 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-168P16.2 NA 0.2 70-80% Testis 1.172707468 CRC,HCC,Normal,PAAD NA NA boxplot TPT1P4 tumor protein, translationally-controlled 1 pseudogene 4 chr6 144200447 144200965 - 519 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TPT1P4 NA 0.459 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot APCDD1L-AS1 APCDD1L antisense RNA 1 (head to head) chr20 58515379 58619888 + 104510 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=APCDD1L-AS1 NA 0.176 40-50% Salivary Gland 1.461994511 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot HSBP1P1 heat shock factor binding protein 1 pseudogene 1 chr14 58463971 58464136 + 166 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HSBP1P1 NA 0.012 50-60% NA NA HCC NA NA boxplot AB019441.29 NA chr14 105978520 105979146 - 627 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AB019441.29 NA 0.929 10-20% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down) NA boxplot RPL6P8 ribosomal protein L6 pseudogene 8 chr3 160584945 160585787 + 843 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL6P8 NA 0.012 60-70% Testis 4.906892038 HCC NA NA boxplot UGDH-AS1 UGDH antisense RNA 1 chr4 39528019 39594707 + 66689 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=UGDH-AS1 NA 0.529 20-30% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up) NA boxplot C1orf140 uncharacterized LOC400804 chr1 221330080 221336296 - 6217 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=C1orf140 NA 0.047 30-40% NA NA Breast_cancer,CRC,Normal,PAAD NA NA boxplot DUX4L27 double homeobox 4 like 27 chr12 34208415 34209675 - 1261 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DUX4L27 NA 0.306 20-30% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot AF064858.8 NA chr21 38988707 39006153 - 17447 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AF064858.8 NA 0.329 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot HNRNPA1P12 heterogeneous nuclear ribonucleoprotein A1 pseudogene 12 chr5 80359080 80360040 - 961 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HNRNPA1P12 NA 0.271 50-60% NA NA CHD,CRC,HCC,Normal,PAAD CHD(up) NA boxplot RP11-426J5.2 NA chr18 48673575 48688419 - 14845 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-426J5.2 NA 0.024 90-100% Testis 4.906892038 HCC,PAAD NA NA boxplot CTB-171A8.1 NA chr19 44632199 44718759 - 86561 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTB-171A8.1 NA 0.153 20-30% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot CTD-2184D3.7 NA chr15 52124561 52140246 + 15686 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2184D3.7 NA 0.165 70-80% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-562A8.4 NA chr15 50497195 50498744 - 1550 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-562A8.4 NA 0.012 40-50% NA NA HCC,PAAD NA NA boxplot RP11-138I18.1 NA chr10 11611305 11612227 + 923 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-138I18.1 NA 0.2 50-60% Testis 4.906892038 CRC,Normal,PAAD NA NA boxplot RP11-523O18.5 NA chr10 48976554 48993046 - 16493 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-523O18.5 NA 0.282 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot MIR17HG miR-17-92 cluster host gene chr13 91347820 91354579 + 6760 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MIR17HG NA 0.165 10-20% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-404O13.4 NA chr1 158195633 158196131 - 499 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-404O13.4 NA 0.259 30-40% Testis 3.676376367 CRC,HCC,Normal,PAAD NA NA boxplot RP11-764D10.2 NA chr17 44486153 44486815 - 663 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-764D10.2 NA 0.047 70-80% NA NA CRC NA NA boxplot RP11-561N12.8 NA chr7 64590599 64591133 - 535 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-561N12.8 NA 0.012 40-50% NA NA Normal NA NA boxplot UBE2Q2P11 ubiquitin conjugating enzyme E2Q family member 2 pseudogene 11 chr15 84412773 84421837 - 9065 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=UBE2Q2P11 NA 0.012 70-80% NA NA NA NA NA boxplot EIF4E2P2 eukaryotic translation initiation factor 4E family member 2 pseudogene 2 chr3 115279125 115279860 + 736 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=EIF4E2P2 NA 0.024 60-70% NA NA Normal,PAAD NA NA boxplot DISC1FP1 DISC1 fusion partner 1 (non-protein coding) chr11 90251232 90915052 + 663821 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DISC1FP1 NA 0.447 30-40% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-832A4.7 NA chr11 118264593 118266817 + 2225 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-832A4.7 NA 0.035 60-70% NA NA Breast_cancer,HCC,PAAD NA NA boxplot RP5-1057J7.7 NA chr1 23378380 23379029 - 650 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-1057J7.7 NA 0.012 90-100% NA NA Breast_cancer,Normal NA NA boxplot RP11-634B7.4 NA chr1 247639749 247747062 + 107314 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-634B7.4 exo_circ_043221,exo_circ_003170 0.047 70-80% Testis 4.366494084 Breast_cancer,CRC,HCC,Normal NA NA boxplot RP11-174O3.3 NA chr3 120349449 120423826 + 74378 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-174O3.3 NA 0.141 70-80% Testis 4.906892038 Breast_cancer,HCC,Normal,PAAD NA NA boxplot FOXP1-IT1 FOXP1 intronic transcript 1 chr3 71570255 71574457 - 4203 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FOXP1-IT1 exo_circ_033093,exo_circ_054379 0.271 10-20% Testis 1.532826433 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-395L14.17 NA chr2 113657908 113658675 + 768 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-395L14.17 NA 0.918 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),PAAD(up) NA boxplot HCG20 HLA complex group 20 (non-protein coding) chr6 30766825 30792250 + 25426 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HCG20 NA 0.035 20-30% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot RP11-474D1.2 NA chr12 130070325 130072685 + 2361 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-474D1.2 NA 0.012 30-40% Testis 4.781566105 Breast_cancer,Normal NA NA boxplot STMN1P1 stathmin 1 pseudogene 1 chr12 31715342 31715781 - 440 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=STMN1P1 NA 0.129 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-521C20.3 NA chr15 40088832 40089386 + 555 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-521C20.3 NA 0.212 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP4-594A5.1 NA chr7 8303741 8341343 + 37603 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-594A5.1 NA 0.012 20-30% Testis 4.906892038 NA NA NA boxplot RP11-46I8.1 NA chr17 5060356 5062123 + 1768 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-46I8.1 NA 0.012 90-100% NA NA CRC NA NA boxplot LINC01158 long intergenic non-protein coding RNA 1158 chr2 104807572 104853183 - 45612 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01158 NA 0.035 80-90% NA NA Breast_cancer,HCC NA NA boxplot CTB-147N14.4 NA chr19 46826895 46828440 - 1546 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTB-147N14.4 NA 0.012 80-90% NA NA Normal NA NA boxplot RP11-319G9.3 NA chr16 78895361 78899644 + 4284 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-319G9.3 NA 0.082 10-20% NA NA Breast_cancer,CRC,Normal,PAAD NA NA boxplot JARID2-AS1 JARID2 antisense RNA 1 chr6 15247815 15248634 - 820 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=JARID2-AS1 NA 0.624 30-40% Testis 3.712688982 Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-1094M14.1 NA chr17 35566517 35566672 + 156 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1094M14.1 NA 0.012 70-80% NA NA PAAD NA NA boxplot CH17-13I23.1 NA chr1 143461221 143498767 - 37547 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CH17-13I23.1 NA 0.094 90-100% NA NA CRC,HCC,Normal NA NA boxplot RP1-200G19.1 NA chr17 69707193 69707373 - 181 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-200G19.1 NA 0.047 70-80% NA NA HCC,Normal,PAAD NA NA boxplot LINC00858 long intergenic non-protein coding RNA 858 chr10 84279980 84294659 + 14680 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00858 NA 0.024 60-70% NA NA Breast_cancer,HCC NA NA boxplot SCARNA15 small Cajal body-specific RNA 15 chr20 43304555 43304679 + 125 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SCARNA15 NA 0.153 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot TRERNA1 translation regulatory long non-coding RNA 1 chr20 50040716 50041504 - 789 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TRERNA1 NA 0.035 70-80% Testis 4.079809129 Breast_cancer,HCC,Normal NA NA boxplot RP5-1119A7.14 NA chr22 36445395 36454944 - 9550 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-1119A7.14 NA 0.235 50-60% Testis 1.905855721 CRC,HCC,Normal,PAAD NA NA boxplot NACAP3 nascent polypeptide associated complex alpha subunit pseudogene 3 chr12 93124063 93124543 - 481 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NACAP3 NA 0.047 70-80% NA NA CRC,HCC,Normal NA NA boxplot AC087294.2 NA chr17 21214331 21230035 + 15705 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC087294.2 NA 0.224 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot IDH1-AS1 IDH1 antisense RNA 1 chr2 208255247 208256181 + 935 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=IDH1-AS1 NA 0.129 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot UMODL1-AS1 UMODL1 antisense RNA 1 chr21 42102134 42108534 - 6401 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=UMODL1-AS1 NA 0.318 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-113D6.10 NA chr11 18209138 18214562 + 5425 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-113D6.10 NA 0.012 80-90% Testis 4.906892038 Breast_cancer,CRC,Normal NA NA boxplot RP11-724M22.1 NA chr4 98496364 98509935 + 13572 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-724M22.1 NA 0.012 80-90% Ovary 2.381575902 Breast_cancer,CRC,HCC NA NA boxplot RP11-328P23.2 NA chr7 65235790 65236723 - 934 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-328P23.2 NA 0.012 80-90% Brain 4.906892038 Breast_cancer,CRC NA NA boxplot KCCAT211 renal clear cell carcinoma-associated transcript 211 chr3 177816865 177899224 + 82360 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KCCAT211 NA 0.012 50-60% NA NA Breast_cancer,HCC NA NA boxplot LINC01215 long intergenic non-protein coding RNA 1215 chr3 108125821 108138610 + 12790 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01215 NA 0.976 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down),PAAD(down) NA boxplot FARSA-AS1 FARSA antisense RNA 1 chr19 12930522 12933296 + 2775 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FARSA-AS1 NA 0.082 90-100% NA NA CRC,HCC,Normal,PAAD NA NA boxplot AC104809.4 NA chr2 240954617 240967451 - 12835 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC104809.4 NA 0.6 20-30% Spleen 3.319307804 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-454P21.1 NA chr5 17684584 17955857 + 271274 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-454P21.1 NA 0.035 50-60% NA NA CRC,HCC NA NA boxplot RP1-111D6.5 NA chr6 149246095 149255415 + 9321 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-111D6.5 NA 0.012 50-60% NA NA Breast_cancer,CRC,Normal NA NA boxplot SRP68P1 signal recognition particle 68kDa pseudogene 1 chr17 16787235 16788141 - 907 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SRP68P1 NA 0.012 90-100% Testis 3.169276497 Normal NA NA boxplot RPS19P1 ribosomal protein S19 pseudogene 1 chr20 18504633 18505066 + 434 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPS19P1 NA 0.012 80-90% Testis 4.906892038 Normal NA NA boxplot LRRC37BP1 leucine rich repeat containing 37B pseudogene 1 chr17 30629680 30637466 + 7787 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LRRC37BP1 NA 0.988 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-128M1.1 NA chr20 2207217 2213151 + 5935 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-128M1.1 NA 0.082 60-70% Testis 1.656309532 Breast_cancer,HCC,Normal NA NA boxplot MIR3622A microRNA 3622a chr8 27701194 27703789 + 2596 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MIR3622A NA 0.012 80-90% NA NA Breast_cancer NA NA boxplot CTD-2600O9.2 NA chr16 57759358 57760024 + 667 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2600O9.2 NA 0.094 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot SEPT14P8 septin 14 pseudogene 8 chr8 200385 200562 - 178 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SEPT14P8 NA 0.024 90-100% NA NA CRC,Normal NA NA boxplot RP11-278L15.2 NA chr3 149384179 149385800 - 1622 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-278L15.2 NA 0.012 80-90% NA NA NA NA NA boxplot PSMD4P1 proteasome (prosome, macropain) 26S subunit, non-ATPase, 4 pseudogene 1 chr21 36485983 36487411 - 1429 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PSMD4P1 NA 0.024 40-50% NA NA HCC NA NA boxplot PWAR1 Prader Willi/Angelman region RNA 1 chr15 25135642 25138055 + 2414 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PWAR1 NA 0.035 90-100% NA NA CRC NA NA boxplot RPL27P12 ribosomal protein L27 pseudogene 12 chr12 123721246 123721639 - 394 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL27P12 NA 0.012 90-100% Testis 4.906892038 Breast_cancer,HCC NA NA boxplot COX6CP18 cytochrome c oxidase subunit VIc pseudogene 18 chr11 2771356 2771577 + 222 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=COX6CP18 NA 0.024 90-100% NA NA CRC NA NA boxplot RP13-516M14.1 NA chr17 82293716 82294910 + 1195 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP13-516M14.1 NA 0.565 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-10C24.1 NA chr3 33797149 33797681 - 533 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-10C24.1 NA 0.318 10-20% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-44F14.10 NA chr16 53391089 53392473 + 1385 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-44F14.10 NA 0.188 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CTD-2571E19.3 NA chr8 62143311 62144769 - 1459 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2571E19.3 NA 0.059 30-40% NA NA Breast_cancer,Normal,PAAD NA NA boxplot RP3-453C12.14 NA chr20 45345115 45345823 - 709 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-453C12.14 NA 0.035 70-80% NA NA HCC,Normal NA NA boxplot KLF7-IT1 KLF7 intronic transcript 1 chr2 207120884 207122044 - 1161 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KLF7-IT1 exo_circ_046715 0.294 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-279O9.4 NA chr4 185471516 185472263 + 748 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-279O9.4 NA 0.129 30-40% NA NA CRC,HCC,Normal NA NA boxplot AF127936.5 NA chr21 14761710 14763090 - 1381 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AF127936.5 NA 0.6 10-20% NA NA CRC,HCC,Normal,PAAD PAAD(up) NA boxplot FAM25E family with sequence similarity 25 member E chr10 45815428 45817324 - 1897 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FAM25E NA 0.024 10-20% Testis 4.906892038 PAAD NA NA boxplot NCLP1 nucleolin pseudogene 1 chr9 136812788 136815536 - 2749 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NCLP1 NA 0.024 80-90% NA NA Breast_cancer,HCC,PAAD NA NA boxplot RP5-894A10.6 NA chr7 141662922 141663846 - 925 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-894A10.6 NA 0.518 20-30% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot BAALC-AS1 BAALC antisense RNA 1 chr8 103156990 103298772 - 141783 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=BAALC-AS1 exo_circ_001464 0.729 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down),PAAD(up) NA boxplot RP11-260N14.1 NA chr7 135246113 135317752 - 71640 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-260N14.1 NA 0.012 50-60% NA NA Breast_cancer,Normal NA NA boxplot AC007040.6 NA chr2 70994510 71002754 + 8245 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC007040.6 NA 0.035 90-100% Testis 3.631755457 Normal NA NA boxplot RP11-296K13.4 NA chr17 29352069 29404105 + 52037 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-296K13.4 NA 0.718 10-20% Testis 4.906892038 CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP3-329A5.8 NA chr6 35220370 35224630 - 4261 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-329A5.8 NA 0.094 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-182J1.14 NA chr15 84389729 84395903 + 6175 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-182J1.14 NA 0.012 10-20% NA NA Breast_cancer,Normal NA NA boxplot C15orf54 chromosome 15 open reading frame 54 chr15 39250684 39254845 + 4162 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=C15orf54 NA 0.882 0-10% Salivary Gland 1.921847001 Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot ANKRD26P1 ankyrin repeat domain 26 pseudogene 1 chr16 46469341 46569097 - 99757 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ANKRD26P1 NA 0.176 50-60% Testis 4.781902327 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP5-996D20.3 NA chr22 46481329 46481760 - 432 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-996D20.3 NA 0.024 80-90% NA NA PAAD NA NA boxplot AC114765.1 NA chr2 220105656 220450778 + 345123 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC114765.1 NA 0.012 20-30% NA NA Breast_cancer NA NA boxplot RP3-337H4.6 NA chr6 43538822 43539703 - 882 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-337H4.6 NA 0.659 70-80% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-807H22.7 NA chr11 72163322 72209241 - 45920 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-807H22.7 NA 0.035 0-10% Spleen 4.398614495 CRC,Normal,PAAD NA NA boxplot FAM35DP family with sequence similarity 35, member A pseudogene chr10 47689707 47730436 + 40730 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FAM35DP NA 0.553 30-40% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-505C13.1 NA chr9 108252154 108254820 - 2667 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-505C13.1 exo_circ_055787 0.024 60-70% Testis 4.906892038 CRC,HCC NA NA boxplot RP11-863P13.4 NA chr16 88088041 88100985 - 12945 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-863P13.4 NA 0.047 60-70% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot ROPN1L-AS1 ROPN1L antisense RNA 1 chr5 10441290 10441792 - 503 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ROPN1L-AS1 NA 0.165 40-50% Testis 4.906892038 CRC,HCC,Normal,PAAD NA NA boxplot RNU12 RNA, U12 small nuclear chr22 42615244 42615907 + 664 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RNU12 NA 0.153 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP5-858B6.1 NA chr1 230823641 230824707 - 1067 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-858B6.1 NA 0.012 10-20% NA NA PAAD NA NA boxplot RP11-732A19.2 NA chr11 6608667 6610135 - 1469 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-732A19.2 NA 0.506 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot LDHAL6FP lactate dehydrogenase A-like 6F, pseudogene chr6 157299045 157300126 - 1082 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LDHAL6FP NA 0.071 50-60% Testis 1.867729423 Breast_cancer,CRC,Normal NA NA boxplot MTND5P5 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 5 pseudogene 5 chr4 101972423 101972798 + 376 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MTND5P5 exo_circ_043941 0.118 30-40% NA NA CRC,Normal NA NA boxplot CTC-459M5.2 NA chr5 112192020 112210139 + 18120 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-459M5.2 NA 0.071 50-60% Testis 1.994966759 Breast_cancer,HCC,Normal,PAAD NA NA boxplot SLC16A1-AS1 SLC16A1 antisense RNA 1 chr1 112956415 113047055 + 90641 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SLC16A1-AS1 NA 0.6 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD PAAD(up) NA boxplot RP11-96C21.2 NA chr15 70570958 70586606 - 15649 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-96C21.2 NA 0.024 80-90% NA NA Breast_cancer,PAAD NA NA boxplot CTD-3224K15.3 NA chr5 139644460 139645002 - 543 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-3224K15.3 NA 0.071 10-20% NA NA Breast_cancer,Normal,PAAD NA NA boxplot AP000265.1 NA chr21 32259804 32261585 - 1782 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AP000265.1 NA 0.024 90-100% NA NA Breast_cancer,Normal NA NA boxplot C16orf47 chromosome 16 open reading frame 47 chr16 73126637 73144447 - 17811 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=C16orf47 NA 0.047 50-60% NA NA HCC,Normal,PAAD NA NA boxplot LINC01424 long intergenic non-protein coding RNA 1424 chr21 44802577 44804717 + 2141 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01424 NA 0.012 80-90% NA NA Normal NA NA boxplot RP1-273N12.4 NA chr6 98829967 98832508 - 2542 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-273N12.4 NA 0.012 80-90% NA NA Breast_cancer,HCC NA NA boxplot AC144450.2 NA chr2 1620510 1625419 - 4910 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC144450.2 NA 0.035 10-20% NA NA Breast_cancer,PAAD NA NA boxplot RP11-5G9.6 NA chr13 43894725 43895182 - 458 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-5G9.6 NA 0.047 70-80% NA NA HCC NA NA boxplot RP3-405J10.3 NA chr12 50185580 50191363 - 5784 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-405J10.3 NA 0.059 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RPL12P38 ribosomal protein L12 pseudogene 38 chr17 60433678 60435996 - 2319 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL12P38 NA 1 10-20% Testis 1.997093972 Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up),CRC(up),HCC(up) NA boxplot RP11-319E16.2 NA chr12 5315961 5319347 + 3387 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-319E16.2 NA 0.012 30-40% NA NA NA NA NA boxplot RP11-989F5.3 NA chr12 130810821 130812622 - 1802 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-989F5.3 NA 0.071 60-70% NA NA CRC,HCC,Normal NA NA boxplot RP11-351E7.2 NA chr8 72429620 72430112 + 493 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-351E7.2 NA 0.012 90-100% NA NA HCC NA NA boxplot LINC00691 long intergenic non-protein coding RNA 691 chr3 24096269 24103238 - 6970 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00691 NA 0.012 0-10% Testis 4.815776147 Breast_cancer,PAAD NA NA boxplot CHCHD2P7 coiled-coil-helix-coiled-coil-helix domain containing 2 pseudogene 7 chr4 87785920 87786371 - 452 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CHCHD2P7 NA 0.012 70-80% Kidney 4.67074254 HCC NA NA boxplot LRRC37A15P leucine-rich repeat containing 37 member A15, pseudogene chr4 102727274 102730721 - 3448 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LRRC37A15P exo_circ_033102,exo_circ_013620 0.894 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP3-471M13.2 NA chr1 172906900 172907684 + 785 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-471M13.2 NA 0.082 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot AC008984.7 NA chr19 54301758 54306026 - 4269 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC008984.7 NA 0.059 80-90% Whole Blood 3.557771962 CRC,HCC,Normal,PAAD NA NA boxplot ATE1-AS1 ATE1 antisense RNA 1 chr10 121928312 121951965 + 23654 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ATE1-AS1 NA 0.353 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-13N13.6 NA chr18 21673628 21682561 + 8934 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-13N13.6 NA 0.012 80-90% NA NA CRC NA NA boxplot ENPP7P3 ectonucleotide pyrophosphatase/phosphodiesterase 7 pseudogene 3 chr3 130167790 130168030 - 241 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ENPP7P3 NA 0.024 80-90% NA NA Breast_cancer,CRC NA NA boxplot RP3-449O17.1 NA chr22 38335762 38398929 - 63168 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-449O17.1 NA 0.729 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CRC(up),PAAD(up) NA boxplot RP11-311H10.4 NA chr9 33402857 33409948 + 7092 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-311H10.4 NA 0.012 90-100% Testis 3.38287629 Breast_cancer,PAAD NA NA boxplot RP11-77M5.1 NA chr1 163259850 163260659 + 810 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-77M5.1 NA 0.012 70-80% NA NA HCC NA NA boxplot RP11-229P13.2 NA chr9 136935840 136937161 + 1322 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-229P13.2 NA 0.024 30-40% NA NA Breast_cancer,PAAD NA NA boxplot RP11-286O18.1 NA chr14 50821880 50823501 + 1622 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-286O18.1 NA 0.306 40-50% Testis 4.864427242 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AL035610.1 NA chr21 28048404 28137611 + 89208 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AL035610.1 NA 0.082 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot LDHBP1 lactate dehydrogenase B pseudogene 1 chr13 113276616 113277734 + 1119 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LDHBP1 NA 0.012 10-20% Testis 4.0687438 Breast_cancer NA NA boxplot LINC01032 long intergenic non-protein coding RNA 1032 chr1 192937300 192948257 - 10958 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01032 exo_circ_053142,exo_circ_015644,exo_circ_032522,exo_circ_043132 0.035 30-40% Testis 4.741310061 Breast_cancer,CHD,CRC NA NA boxplot RP11-437J2.3 NA chr10 93762453 93771991 + 9539 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-437J2.3 NA 0.024 30-40% NA NA Breast_cancer,Normal,PAAD NA NA boxplot RP11-326I11.3 NA chr4 184474802 184477304 + 2503 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-326I11.3 NA 0.706 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),PAAD(down) NA boxplot RP11-182J1.18 NA chr15 84597809 84633987 - 36179 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-182J1.18 NA 0.576 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC004069.2 NA chr4 105137280 105140619 - 3340 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC004069.2 NA 0.682 10-20% NA NA CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-798G7.7 NA chr17 45549781 45558738 - 8958 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-798G7.7 NA 0.588 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot AKR1C7P aldo-keto reductase family 1, member C7, pseudogene chr10 5275173 5288470 - 13298 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AKR1C7P NA 0.376 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot MKLN1-AS MKLN1 antisense RNA chr7 131309744 131328222 - 18479 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MKLN1-AS NA 0.635 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up) NA boxplot RP11-713C5.1 NA chr18 72743756 72745961 - 2206 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-713C5.1 NA 0.165 10-20% Brain 3.131881226 CRC,HCC,Normal,PAAD NA NA boxplot RP11-462L8.1 NA chr10 32958845 33082102 + 123258 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-462L8.1 NA 0.247 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-14I17.3 NA chr8 26440491 26442595 + 2105 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-14I17.3 NA 0.106 30-40% Ovary 1.01481266 CRC,HCC,Normal,PAAD NA NA boxplot PCNPP1 PEST containing nuclear protein pseudogene 1 chr12 111669852 111670362 - 511 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PCNPP1 NA 0.271 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-342M1.7 NA chr1 42886597 42888767 - 2171 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-342M1.7 NA 0.012 80-90% Testis 4.81086532 Breast_cancer,HCC NA NA boxplot RP11-45D17.1 NA chrX 151611664 151671196 + 59533 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-45D17.1 NA 0.012 40-50% NA NA NA NA NA boxplot RP4-800M22.1 NA chr1 52160261 52160600 - 340 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-800M22.1 NA 0.341 70-80% NA NA CRC,HCC,Normal NA NA boxplot CTD-2331H12.5 NA chr19 52861807 52864151 - 2345 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2331H12.5 NA 0.282 10-20% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-362K14.6 NA chr3 169794962 169796213 + 1252 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-362K14.6 NA 0.212 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-498C9.16 NA chr17 81878667 81879557 + 891 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-498C9.16 NA 0.071 60-70% NA NA HCC,Normal NA NA boxplot RP1-151B14.9 NA chr22 37215738 37215891 - 154 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-151B14.9 NA 0.024 40-50% NA NA HCC,Normal NA NA boxplot RPS3P2 ribosomal protein S3 pseudogene 2 chr20 38537758 38538458 + 701 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPS3P2 NA 0.106 40-50% NA NA CRC,HCC,Normal NA NA boxplot RAB30-AS1 RAB30 antisense RNA 1 (head to head) chr11 83072066 83106719 + 34654 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RAB30-AS1 NA 0.953 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD PAAD(up) NA boxplot RP11-554D14.6 NA chr12 107839291 107864562 - 25272 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-554D14.6 NA 0.012 50-60% Pituitary 1.834766455 Breast_cancer,Normal NA NA boxplot CTD-2319I12.9 NA chr17 60124110 60125474 - 1365 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2319I12.9 NA 0.012 80-90% NA NA PAAD NA NA boxplot AP000593.7 NA chr11 72302139 72302965 + 827 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AP000593.7 NA 0.047 40-50% NA NA CRC,PAAD NA NA boxplot RP4-559A3.6 NA chr1 225936411 225937557 - 1147 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-559A3.6 NA 0.035 90-100% NA NA HCC,Normal NA NA boxplot CTD-3014M21.1 NA chr17 43360041 43361361 - 1321 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-3014M21.1 NA 0.506 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot GM140 uncharacterized LOC100287948 chr1 181236388 181238604 + 2217 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GM140 NA 0.012 60-70% NA NA NA NA NA boxplot RP3-331H24.5 NA chr6 71295173 71417436 - 122264 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-331H24.5 NA 0.235 70-80% NA NA CRC,HCC,Normal,PAAD NA NA boxplot IL12A-AS1 IL12A antisense RNA 1 chr3 159913400 160225299 - 311900 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=IL12A-AS1 NA 0.059 60-70% Testis 3.290880266 Breast_cancer,Normal,PAAD NA NA boxplot CTD-2139B15.5 NA chr5 17369225 17375577 - 6353 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2139B15.5 NA 0.035 40-50% Testis 4.906892038 HCC,PAAD NA NA boxplot RP11-468H14.2 NA chr8 17131181 17149789 + 18609 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-468H14.2 exo_circ_016502 0.153 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-96P7.1 NA chr16 76634998 76658478 + 23481 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-96P7.1 NA 0.024 80-90% Testis 4.764150286 Breast_cancer,CRC,Normal NA NA boxplot RP11-267M23.1 NA chr8 94427712 94429888 - 2177 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-267M23.1 NA 0.518 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot ELDR EGFR long non-coding downstream RNA chr7 55235965 55255635 - 19671 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ELDR NA 0.024 30-40% NA NA HCC NA NA boxplot SETP12 SET pseudogene 12 chr4 120895494 120897083 - 1590 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SETP12 NA 0.047 50-60% NA NA Normal,PAAD NA NA boxplot RP11-510J16.5 NA chr16 82044336 82139631 - 95296 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-510J16.5 NA 0.047 80-90% NA NA Breast_cancer,HCC,Normal NA NA boxplot AF127936.9 NA chr21 14818843 15014430 - 195588 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AF127936.9 exo_circ_029055 0.906 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down) NA boxplot AP000925.2 NA chr11 111670956 111672404 - 1449 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AP000925.2 exo_circ_056273 0.024 20-30% NA NA Breast_cancer,Normal NA NA boxplot RP11-297C4.1 NA chr16 30498766 30499554 - 789 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-297C4.1 NA 0.529 30-40% Adrenal Gland 1.739075373 CRC,HCC,Normal,PAAD NA NA boxplot RP11-8H2.1 NA chr18 46028306 46029829 + 1524 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-8H2.1 NA 0.153 30-40% Testis 2.982103574 CRC,HCC,Normal,PAAD NA NA boxplot RP11-568J23.8 NA chr16 85697335 85697868 - 534 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-568J23.8 NA 0.059 70-80% NA NA CRC,HCC NA NA boxplot RP1-308E4.1 NA chr1 28453541 28453934 + 394 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-308E4.1 NA 0.106 50-60% Cervix 4.906892038 CRC,Normal,PAAD NA NA boxplot LINC00261 long intergenic non-protein coding RNA 261 chr20 22547671 22578642 - 30972 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00261 NA 0.306 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot PHACTR2-AS1 PHACTR2 antisense RNA 1 chr6 143554325 143562031 - 7707 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PHACTR2-AS1 NA 0.024 60-70% NA NA Breast_cancer,HCC,Normal NA NA boxplot AC007036.5 NA chr7 30157531 30159534 + 2004 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC007036.5 NA 0.929 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot CA5BP1 carbonic anhydrase VB pseudogene 1 chrX 15674932 15703724 + 28793 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CA5BP1 NA 0.965 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD PAAD(up) NA boxplot SEPT7P7 septin 7 pseudogene 7 chr9 98606833 98608133 + 1301 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SEPT7P7 NA 0.024 90-100% NA NA Breast_cancer,CRC,Normal NA NA boxplot RP11-235E17.4 NA chr17 3601761 3602272 - 512 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-235E17.4 NA 0.035 70-80% NA NA Breast_cancer,CRC,Normal,PAAD NA NA boxplot RP11-290O12.1 NA chr4 154373886 154374347 + 462 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-290O12.1 NA 0.012 50-60% NA NA Normal NA NA boxplot RP11-108O10.2 NA chr11 111768668 111778350 - 9683 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-108O10.2 NA 0.024 10-20% Liver 3.048290843 PAAD NA NA boxplot SETP6 SET pseudogene 6 chr3 81612238 81612805 - 568 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SETP6 NA 0.059 50-60% NA NA CRC,Normal,PAAD NA NA boxplot AC069213.4 NA chr3 195349664 195350030 + 367 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC069213.4 NA 0.012 50-60% NA NA Normal NA NA boxplot MTND1P28 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 1 pseudogene 28 chr2 117023918 117024867 + 950 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MTND1P28 NA 0.012 50-60% NA NA HCC NA NA boxplot RPL23AP52 ribosomal protein L23a pseudogene 52 chr7 11006399 11006876 - 478 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL23AP52 NA 0.012 90-100% NA NA Normal NA NA boxplot RP1-90J4.1 NA chr12 47415008 47420179 + 5172 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-90J4.1 NA 0.012 60-70% Testis 4.783956407 Breast_cancer,HCC,Normal NA NA boxplot SEPT7P2 septin 7 pseudogene 2 chr7 45723780 45768985 - 45206 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SEPT7P2 NA 0.976 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RPL7P8 ribosomal protein L7 pseudogene 8 chr1 109651370 109652099 + 730 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL7P8 NA 0.012 90-100% NA NA NA NA NA boxplot RP11-480D4.2 NA chr5 8387638 8457564 - 69927 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-480D4.2 NA 0.106 70-80% NA NA CRC,HCC,Normal NA NA boxplot RP4-555D20.3 NA chr3 43996896 43997443 + 548 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-555D20.3 NA 0.012 70-80% Testis 3.799168633 Breast_cancer,Normal NA NA boxplot RP11-85B7.5 NA chr17 9244666 9244897 - 232 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-85B7.5 NA 0.024 70-80% NA NA CRC,Normal NA NA boxplot AC004862.6 NA chr7 80312574 80391474 - 78901 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC004862.6 NA 0.035 10-20% NA NA HCC,PAAD NA NA boxplot DDX6P2 DEAD-box helicase 6 pseudogene 2 chr13 86275493 86277262 + 1770 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DDX6P2 NA 0.035 80-90% NA NA HCC,Normal NA NA boxplot RP1-56K13.3 NA chr17 38918801 38921769 - 2969 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-56K13.3 NA 0.565 10-20% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot ATP5A1P7 ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1 pseudogene 7 chr9 62686912 62688190 + 1279 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ATP5A1P7 NA 0.012 10-20% NA NA HCC NA NA boxplot GHc-210E9.2 NA chrX 101191115 101191409 - 295 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GHc-210E9.2 NA 0.047 40-50% Testis 4.906892038 Breast_cancer,HCC,Normal NA NA boxplot RP11-50I19.2 NA chr12 32000375 32001222 + 848 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-50I19.2 NA 0.224 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-99J16__A.2 NA chr1 230710698 230795492 - 84795 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-99J16__A.2 NA 0.059 10-20% NA NA Breast_cancer,HCC NA NA boxplot RP11-167P11.2 NA chr16 67738588 67739922 - 1335 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-167P11.2 NA 0.059 50-60% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot NEAT1 nuclear paraspeckle assembly transcript 1 (non-protein coding) chr11 65422774 65445540 + 22767 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NEAT1 NA 1 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down),CRC(up),HCC(down),PAAD(up) Yes boxplot AC007318.5 NA chr2 65205108 65205988 + 881 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC007318.5 NA 0.929 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-578O24.2 NA chr8 78723796 78724136 - 341 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-578O24.2 NA 0.024 50-60% NA NA Breast_cancer,CRC,PAAD NA NA boxplot RP11-174C7.3 NA chr6 129819637 129820170 - 534 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-174C7.3 NA 0.012 60-70% NA NA CRC NA NA boxplot SNX29P2 sorting nexin 29 pseudogene 2 chr16 29350746 29370272 + 19527 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SNX29P2 NA 0.988 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot CTA-228A9.4 NA chr22 38130216 38150612 + 20397 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTA-228A9.4 NA 0.129 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot ABHD17AP6 abhydrolase domain containing 17A pseudogene 6 chr17 20814620 20844257 + 29638 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ABHD17AP6 NA 0.976 20-30% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up),HCC(up) NA boxplot DLEU2 deleted in lymphocytic leukemia 2 (non-protein coding) chr13 49982552 50125720 - 143169 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DLEU2 exo_circ_021119,exo_circ_012409,exo_circ_045612,exo_circ_039987,exo_circ_011004,exo_circ_006746,exo_circ_016941,exo_circ_001470 1 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot OR7E7P olfactory receptor family 7 subfamily E member 7 pseudogene chr7 97946987 97947998 - 1012 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=OR7E7P NA 0.106 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP1-124C6.1 NA chr6 113428540 113433421 - 4882 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-124C6.1 NA 0.035 60-70% NA NA CRC,HCC NA NA boxplot RP11-248C1.3 NA chr10 89837612 89839334 - 1723 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-248C1.3 NA 0.082 70-80% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-483M24.2 NA chrX 7113005 7113404 - 400 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-483M24.2 NA 0.012 20-30% NA NA Breast_cancer,PAAD NA NA boxplot RP11-337C18.8 NA chr1 147172771 147211568 + 38798 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-337C18.8 NA 0.894 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot AP000442.1 NA chr11 59616429 59639861 + 23433 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AP000442.1 exo_circ_004831 0.271 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot ALKBH3-AS1 ALKBH3 antisense RNA 1 chr11 43909292 43920944 - 11653 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ALKBH3-AS1 NA 0.024 10-20% Testis 1.975586174 Normal,PAAD NA NA boxplot RP11-90C4.1 NA chr1 55581037 55868248 + 287212 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-90C4.1 exo_circ_053379 0.8 0-10% Testis 3.508709173 Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP13-578N3.3 NA chr4 143700257 143865072 + 164816 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP13-578N3.3 NA 0.918 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down) NA boxplot CTD-3224I3.3 NA chr11 11243188 11243715 - 528 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-3224I3.3 NA 0.012 90-100% Testis 2.18784519 Breast_cancer,Normal NA NA boxplot CTC-518P12.6 NA chr19 4838332 4838907 + 576 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-518P12.6 NA 0.4 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP3-428L16.2 NA chr6 160990318 160992342 - 2025 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-428L16.2 NA 0.282 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot THUMPD3-AS1 THUMPD3 antisense RNA 1 chr3 9349689 9398579 - 48891 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=THUMPD3-AS1 NA 0.929 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down),HCC(down) NA boxplot FUNDC2P4 FUN14 domain containing 2 pseudogene 4 chr22 39155525 39155945 + 421 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FUNDC2P4 NA 0.035 70-80% NA NA CRC NA NA boxplot EIF5P1 eukaryotic translation initiation factor 5 pseudogene 1 chrX 9818239 9819469 - 1231 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=EIF5P1 NA 0.012 0-10% NA NA Normal NA NA boxplot LINC00243 long intergenic non-protein coding RNA 243 chr6 30798654 30830659 - 32006 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00243 NA 0.647 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-195C7.3 NA chr1 176272483 176273402 + 920 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-195C7.3 NA 0.082 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-465K16.1 NA chr8 40900016 40901854 - 1839 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-465K16.1 NA 0.012 80-90% Testis 4.101113606 Normal NA NA boxplot PGM5P4-AS1 PGM5P4 antisense RNA 1 chr2 113527568 113542672 - 15105 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PGM5P4-AS1 NA 0.047 70-80% NA NA CRC,PAAD NA NA boxplot UBE2Q2P9 ubiquitin conjugating enzyme E2Q family member 2 pseudogene 9 chr3 72006774 72006975 + 202 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=UBE2Q2P9 NA 0.012 0-10% NA NA Normal NA NA boxplot MEIS3P1 Meis homeobox 3 pseudogene 1 chr17 15786618 15787575 + 958 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MEIS3P1 NA 0.647 30-40% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-701H24.5 NA chr15 24984864 24985173 + 310 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-701H24.5 exo_circ_045813 0.212 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot LINC01186 long intergenic non-protein coding RNA 1186 chrX 46325924 46327645 - 1722 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01186 NA 0.035 20-30% NA NA Breast_cancer,PAAD NA NA boxplot OIP5-AS1 OIP5 antisense RNA 1 chr15 41283990 41309737 + 25748 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=OIP5-AS1 NA 1 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-375A5.1 NA chr1 77346046 77349585 - 3540 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-375A5.1 NA 0.176 40-50% Brain 4.906892038 CRC,Normal,PAAD NA NA boxplot RP11-96D1.9 NA chr16 68199795 68200981 + 1187 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-96D1.9 NA 0.059 60-70% NA NA Breast_cancer,CRC NA NA boxplot RP11-359B20.1 NA chr8 33436268 33436700 - 433 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-359B20.1 NA 0.035 20-30% NA NA Normal NA NA boxplot MIR371B microRNA 371b chr19 53787597 53788169 - 573 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MIR371B NA 0.129 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-365P13.5 NA chr13 110916004 110917827 + 1824 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-365P13.5 NA 0.106 30-40% NA NA CRC,Normal,PAAD NA NA boxplot RP11-907D1.3 NA chr14 96992864 96996601 + 3738 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-907D1.3 NA 0.059 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP13-977J11.8 NA chr12 132190213 132190997 + 785 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP13-977J11.8 NA 0.024 60-70% NA NA Breast_cancer,Normal,PAAD NA NA boxplot CTB-11I22.1 NA chr5 159209921 159248796 + 38876 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTB-11I22.1 NA 0.024 10-20% Testis 3.871732076 HCC NA NA boxplot EPN2-AS1 EPN2 antisense RNA 1 chr17 19296596 19306261 - 9666 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=EPN2-AS1 NA 0.024 40-50% NA NA Breast_cancer,HCC,Normal NA NA boxplot RP11-90K18.1 NA chr16 60925733 60928541 - 2809 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-90K18.1 NA 0.012 40-50% NA NA Breast_cancer,CRC NA NA boxplot LINC00643 long intergenic non-protein coding RNA 643 chr14 62114353 62130962 + 16610 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00643 NA 0.576 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down),PAAD(up) NA boxplot HLA-DRB9 major histocompatibility complex, class II, DR beta 9 (pseudogene) chr6 32459821 32473500 - 13680 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HLA-DRB9 exo_circ_022133 0.012 40-50% NA NA Normal NA NA boxplot RP11-213H15.1 NA chr5 91280097 91281142 - 1046 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-213H15.1 NA 0.012 90-100% NA NA Normal NA NA boxplot ATP5A1P8 ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1 pseudogene 8 chr9 39654241 39655531 - 1291 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ATP5A1P8 NA 0.012 80-90% NA NA CRC NA NA boxplot RP11-416N2.4 NA chr10 103608619 103610050 + 1432 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-416N2.4 NA 0.118 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-13N13.5 NA chr18 21661787 21662395 - 609 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-13N13.5 NA 0.035 80-90% NA NA CRC NA NA boxplot AL136419.6 NA chr14 24209646 24215987 - 6342 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AL136419.6 NA 0.929 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RPS19P3 ribosomal protein S19 pseudogene 3 chr14 34568689 34569129 - 441 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPS19P3 NA 0.082 80-90% NA NA CRC,Normal NA NA boxplot NDUFA5P11 NADH:ubiquinone oxidoreductase subunit A5 pseudogene 11 chr16 47598654 47598996 - 343 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NDUFA5P11 NA 0.918 10-20% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(down),PAAD(down) NA boxplot RP11-467H10.1 NA chr7 77115399 77116192 - 794 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-467H10.1 NA 0.059 80-90% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CYP2AB1P cytochrome P450 family 2 subfamily AB member 1, pseudogene chr3 183895900 183910936 - 15037 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CYP2AB1P NA 0.024 10-20% Stomach 4.521336404 Breast_cancer,PAAD NA NA boxplot EDRF1-AS1 EDRF1 antisense RNA 1 chr10 125725634 125752110 - 26477 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=EDRF1-AS1 NA 0.129 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-737O24.2 NA chr18 2948238 2960756 + 12519 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-737O24.2 NA 0.518 20-30% Whole Blood 1.35338605 Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot AC006014.7 NA chr7 75474707 75486108 - 11402 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC006014.7 NA 0.835 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-452N17.1 NA chr2 164573741 164574054 + 314 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-452N17.1 NA 0.929 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down) NA boxplot ZNF321P zinc finger protein 321, pseudogene chr19 52927135 52942601 - 15467 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ZNF321P exo_circ_052166 0.894 10-20% NA NA CHD,CRC,HCC,Normal,PAAD CHD(down),PAAD(down) NA boxplot RPL23AP1 ribosomal protein L23a pseudogene 1 chr6 29726669 29727139 - 471 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL23AP1 NA 0.647 20-30% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot METTL15P3 methyltransferase like 15 pseudogene 3 chrX 22435598 22436818 + 1221 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=METTL15P3 NA 0.012 90-100% NA NA HCC NA NA boxplot TAS2R63P taste 2 receptor member 63 pseudogene chr12 11048332 11049256 - 925 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TAS2R63P NA 0.047 20-30% NA NA CRC,PAAD NA NA boxplot CTC-444N24.7 NA chr19 57293083 57294469 - 1387 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-444N24.7 NA 0.212 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot VTI1BP2 vesicle transport through interaction with t-SNAREs 1B pseudogene 2 chr4 183483490 183484185 + 696 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=VTI1BP2 NA 0.012 70-80% NA NA HCC NA NA boxplot MIR762HG MIR762 host gene chr16 30875222 30895220 + 19999 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MIR762HG NA 0.706 20-30% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down),PAAD(down) NA boxplot RP11-318K15.2 NA chr8 55893595 55895739 + 2145 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-318K15.2 exo_circ_050243,exo_circ_055702,exo_circ_013673 0.259 10-20% NA NA CRC,HCC,Normal,PAAD CRC(up) NA boxplot RP11-521D12.1 NA chr2 9638772 9649439 + 10668 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-521D12.1 NA 0.012 80-90% Brain 2.052560444 Breast_cancer,Normal NA NA boxplot RP11-876N24.5 NA chr16 10938886 10940044 - 1159 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-876N24.5 NA 0.835 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),HCC(up),PAAD(up) NA boxplot RP11-273B20.1 NA chr12 7129079 7131198 - 2120 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-273B20.1 NA 0.047 70-80% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot LMF1-AS1 LMF1 antisense RNA 1 chr16 921033 934495 + 13463 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LMF1-AS1 NA 0.082 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-73M11.3 NA chr13 112811566 112812158 + 593 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-73M11.3 NA 0.035 70-80% NA NA CRC,HCC,Normal NA NA boxplot AC100802.3 NA chr8 20079305 20118442 + 39138 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC100802.3 NA 0.012 40-50% Testis 4.500354856 HCC NA NA boxplot TREML3P triggering receptor expressed on myeloid cells like 3, pseudogene chr6 41208713 41217947 - 9235 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TREML3P NA 0.647 10-20% Whole Blood 3.48537151 Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot LINC01564 long intergenic non-protein coding RNA 1564 chr6 53628380 53631394 + 3015 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01564 NA 0.024 50-60% NA NA CRC NA NA boxplot RP11-320A16.1 NA chr15 88989519 88990245 - 727 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-320A16.1 NA 0.012 0-10% Testis 3.898914179 PAAD NA NA boxplot SEPT2P1 septin 2 pseudogene 1 chr1 105698039 105698218 + 180 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SEPT2P1 NA 0.412 80-90% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP1-153P14.8 NA chr6 37507348 37535616 + 28269 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-153P14.8 NA 0.271 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-158A14.1 NA chr8 6036433 6036974 - 542 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-158A14.1 NA 0.012 90-100% Testis 4.906892038 Breast_cancer,Normal NA NA boxplot MTATP8P1 mitochondrially encoded ATP synthase 8 pseudogene 1 chr1 633535 633741 + 207 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MTATP8P1 NA 0.753 0-10% NA NA CRC,HCC,Normal,PAAD PAAD(up) NA boxplot RP11-530N7.2 NA chr17 6927472 6928191 - 720 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-530N7.2 NA 0.224 30-40% Pituitary 2.110891565 CRC,HCC,Normal,PAAD NA NA boxplot RP11-603B24.1 NA chr15 22278971 22282872 + 3902 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-603B24.1 NA 0.929 0-10% Testis 3.365921776 Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-359J14.2 NA chr12 22460519 22463914 - 3396 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-359J14.2 NA 0.153 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot AC073842.19 NA chr7 100130964 100140439 + 9476 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC073842.19 NA 0.071 70-80% Pituitary 1.919459559 CRC,Normal,PAAD NA NA boxplot ACTBP2 actin, beta pseudogene 2 chr5 77784881 77786003 + 1123 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ACTBP2 NA 0.906 60-70% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-271K11.6 NA chr17 30617680 30617790 - 111 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-271K11.6 NA 0.012 80-90% NA NA HCC NA NA boxplot AC005363.9 NA chr16 1963745 1964095 - 351 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC005363.9 NA 0.141 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RPL9P16 ribosomal protein L9 pseudogene 16 chr4 168755816 168756382 + 567 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL9P16 NA 0.024 30-40% Cervix 2.58458936 PAAD NA NA boxplot PTPN2P1 protein tyrosine phosphatase, non-receptor type 2 pseudogene 1 chr1 178746683 178747754 - 1072 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PTPN2P1 NA 0.741 30-40% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-472B18.1 NA chr4 39480255 39481905 + 1651 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-472B18.1 NA 0.082 60-70% NA NA CRC,HCC,Normal NA NA boxplot LGALS8-AS1 LGALS8 antisense RNA 1 chr1 236523052 236524508 - 1457 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LGALS8-AS1 NA 0.071 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot BMP6P1 bone morphogenetic protein 6 pseudogene 1 chr22 22185941 22186619 + 679 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=BMP6P1 NA 0.012 50-60% Testis 4.419995425 CRC NA NA boxplot RP11-686G8.5 NA chr12 111649573 111649938 + 366 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-686G8.5 NA 0.435 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot C2orf27B chromosome 2 open reading frame 27B chr2 131794961 131801661 - 6701 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=C2orf27B NA 0.047 90-100% Pancreas 3.775846207 Breast_cancer,HCC,PAAD NA NA boxplot KRT18P31 keratin 18 pseudogene 31 chr5 36885206 36886497 + 1292 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KRT18P31 exo_circ_003979 0.353 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot XXbac-B444P24.8 NA chr22 20198729 20204918 - 6190 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=XXbac-B444P24.8 NA 0.529 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot HYALP1 hyaluronoglucosaminidase pseudogene 1 chr7 123814139 123829252 + 15114 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HYALP1 NA 0.012 10-20% Testis 4.906892038 Normal NA NA boxplot RP11-479G22.8 NA chr10 32887255 32889311 - 2057 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-479G22.8 NA 0.341 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot GDNF-AS1 GDNF antisense RNA 1 (head to head) chr5 37811589 37953827 + 142239 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GDNF-AS1 NA 0.024 70-80% NA NA Breast_cancer,PAAD NA NA boxplot RP5-1068H6.1 NA chr20 4735669 4736673 - 1005 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-1068H6.1 NA 0.012 10-20% Testis 4.906892038 Normal NA NA boxplot NARF-IT1 NARF intronic transcript 1 chr17 82482098 82483388 + 1291 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NARF-IT1 NA 0.176 60-70% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot RP11-386G11.5 NA chr12 48998367 49019235 + 20869 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-386G11.5 NA 0.153 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-648O15.2 NA chr11 87121058 87121596 + 539 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-648O15.2 NA 0.047 20-30% NA NA CRC,PAAD NA NA boxplot RP1-167A14.2 NA chr6 166969626 166999065 - 29440 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-167A14.2 NA 0.294 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot GAPDHP66 glyceraldehyde-3-phosphate dehydrogenase pseudogene 66 chr18 3977649 3978615 - 967 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GAPDHP66 NA 0.012 40-50% Testis 4.079338683 Breast_cancer,HCC NA NA boxplot RP11-575B7.3 NA chr1 60114875 60149679 + 34805 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-575B7.3 NA 0.047 70-80% Testis 4.253411892 CRC,Normal NA NA boxplot RP11-145G20.1 NA chr4 96310701 96818864 + 508164 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-145G20.1 exo_circ_044134 0.318 10-20% Testis 4.906892038 CRC,HCC,Normal,PAAD NA NA boxplot RP11-505P4.6 NA chr6 73492025 73492742 - 718 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-505P4.6 NA 0.318 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot XX-C00717C00720L.1 NA chr22 50316035 50317025 + 991 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=XX-C00717C00720L.1 NA 0.024 90-100% NA NA Breast_cancer,CRC,HCC NA NA boxplot RP11-293A21.1 NA chr4 26859806 26860599 - 794 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-293A21.1 NA 0.424 30-40% Testis 2.548393822 CRC,HCC,Normal,PAAD NA NA boxplot RP4-669K10.8 NA chr1 28544460 28546542 + 2083 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-669K10.8 NA 0.082 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC006042.8 NA chr7 7980312 7982228 + 1917 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC006042.8 NA 0.2 10-20% NA NA CRC,HCC,Normal,PAAD PAAD(up) NA boxplot RP11-352D13.5 NA chr15 69278675 69295322 + 16648 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-352D13.5 NA 0.012 80-90% Kidney 2.644258153 Breast_cancer NA NA boxplot RP11-506M12.1 NA chr7 100115214 100127139 - 11926 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-506M12.1 NA 0.118 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot KRT8P48 keratin 8 pseudogene 48 chr5 146706381 146707600 - 1220 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KRT8P48 NA 0.094 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CTD-3224K15.2 NA chr5 139648999 139649728 - 730 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-3224K15.2 NA 0.047 90-100% NA NA HCC,Normal NA NA boxplot SDHCP3 succinate dehydrogenase complex subunit C pseudogene 3 chr2 23943846 23944351 + 506 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SDHCP3 NA 0.047 80-90% NA NA CRC,Normal,PAAD NA NA boxplot CTC-543D15.8 NA chr19 9538733 9539734 + 1002 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-543D15.8 NA 0.506 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot STRCP1 stereocilin pseudogene 1 chr15 43699488 43718184 - 18697 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=STRCP1 NA 0.129 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-561N12.2 NA chr7 64005576 64016130 + 10555 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-561N12.2 NA 0.012 0-10% Testis 4.906892038 Breast_cancer,PAAD NA NA boxplot RP11-56G10.2 NA chr12 74538145 74538633 - 489 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-56G10.2 NA 0.565 10-20% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot LEMD1-AS1 LEMD1 antisense RNA 1 chr1 205373252 205387440 + 14189 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LEMD1-AS1 NA 0.024 70-80% Ovary 3.204910116 Normal NA NA boxplot CTD-2196E14.5 NA chr16 23687049 23687689 - 641 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2196E14.5 NA 0.024 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-543H12.1 NA chr12 81094375 81125845 - 31471 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-543H12.1 NA 0.047 70-80% Testis 4.868339115 Normal,PAAD NA NA boxplot RP11-429D19.1 NA chr15 59266720 59271162 - 4443 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-429D19.1 NA 0.012 10-20% NA NA Breast_cancer NA NA boxplot CFL1P5 cofilin 1 (non-muscle) pseudogene 5 chr5 69313371 69313872 - 502 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CFL1P5 NA 0.141 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot PGGT1BP1 protein geranylgeranyltransferase type I, beta subunit pseudogene 1 chr10 50726947 50727969 - 1023 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PGGT1BP1 NA 0.059 90-100% Testis 4.906892038 Normal,PAAD NA NA boxplot RP11-11M20.4 NA chr20 62066830 62068437 + 1608 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-11M20.4 NA 0.082 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot TPM3P6 tropomyosin 3 pseudogene 6 chr19 53479350 53480091 + 742 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TPM3P6 NA 0.718 30-40% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot CTA-398F10.1 NA chr8 8414690 8424632 - 9943 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTA-398F10.1 NA 0.012 20-30% Testis 4.906892038 Normal NA NA boxplot CTA-315H11.2 NA chr7 73609262 73611502 - 2241 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTA-315H11.2 NA 0.012 20-30% NA NA Breast_cancer NA NA boxplot YWHAQP5 YWHAQ pseudogene 5 chr2 98694109 98695490 + 1382 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=YWHAQP5 NA 0.024 90-100% NA NA Breast_cancer,CRC,HCC NA NA boxplot ANKRD30BP3 ankyrin repeat domain 30B pseudogene 3 chr10 45156775 45176925 + 20151 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ANKRD30BP3 NA 0.012 80-90% Testis 4.706514283 Normal NA NA boxplot RP11-334E15.1 NA chr2 161433874 161437458 + 3585 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-334E15.1 NA 0.024 10-20% NA NA Breast_cancer,PAAD NA NA boxplot PARGP1 poly(ADP-ribose) glycohydrolase pseudogene 1 chr10 45854093 45972154 - 118062 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PARGP1 NA 1 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down) NA boxplot AC010136.2 NA chr2 217978707 217992615 + 13909 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC010136.2 NA 0.059 70-80% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot CTC-338M12.4 uncharacterized LOC101928649 chr5 181246523 181272167 + 25645 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-338M12.4 NA 0.694 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down) NA boxplot RP3-449M8.6 NA chr14 74474007 74474864 - 858 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-449M8.6 NA 0.094 80-90% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot LL0XNC01-7P3.1 NA chrX 49273054 49275768 + 2715 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LL0XNC01-7P3.1 NA 0.176 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot LINC00911 long intergenic non-protein coding RNA 911 chr14 85393879 85420074 + 26196 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00911 NA 0.024 30-40% Testis 4.399883994 Normal NA NA boxplot RP11-138I17.1 NA chr4 136796722 137212799 - 416078 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-138I17.1 NA 0.047 10-20% NA NA CRC,HCC,PAAD NA NA boxplot TATDN1P1 TatD DNase domain containing 1 pseudogene 1 chr10 63222155 63223045 + 891 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TATDN1P1 NA 0.365 70-80% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot AC022182.2 NA chr8 60937705 60939871 - 2167 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC022182.2 NA 0.176 80-90% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-403N16.4 NA chr9 79913269 79915736 + 2468 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-403N16.4 NA 0.012 80-90% NA NA Breast_cancer,PAAD NA NA boxplot RP11-712B9.2 NA chr11 95150539 95234104 + 83566 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-712B9.2 NA 0.906 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-98D18.3 NA chr1 151763384 151769501 - 6118 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-98D18.3 NA 0.741 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-12A20.6 NA chr9 67723736 67724105 + 370 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-12A20.6 NA 0.012 90-100% NA NA HCC NA NA boxplot RP11-365D23.2 NA chr1 214612960 214613398 - 439 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-365D23.2 NA 0.024 70-80% NA NA Normal NA NA boxplot RPL13AP3 ribosomal protein L13a pseudogene 3 chr14 55766177 55767717 + 1541 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL13AP3 NA 0.024 90-100% Testis 4.906892038 CRC,Normal NA NA boxplot RP4-614C10.3 NA chr2 89622213 89640635 - 18423 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-614C10.3 NA 0.059 90-100% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-426C22.4 NA chr16 29217170 29220031 - 2862 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-426C22.4 NA 0.082 30-40% NA NA Breast_cancer,Normal,PAAD NA NA boxplot RP11-545A16.3 NA chr1 179586705 179589175 + 2471 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-545A16.3 NA 0.012 70-80% Testis 2.716936868 Breast_cancer,CRC NA NA boxplot AC010761.10 NA chr17 28749731 28750079 - 349 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC010761.10 NA 0.047 70-80% NA NA Normal NA NA boxplot CTA-331F8.1 NA chr16 58597589 58597945 - 357 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTA-331F8.1 NA 0.047 40-50% Testis 4.466585996 CRC,PAAD NA NA boxplot LA16c-380A1.2 NA chr16 707650 709067 + 1418 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LA16c-380A1.2 NA 0.024 50-60% NA NA Breast_cancer,CRC,Normal NA NA boxplot TMPOP2 thymopoietin pseudogene 2 (functional) chr16 74667506 74668706 + 1201 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TMPOP2 NA 0.118 40-50% NA NA CRC,HCC,Normal NA NA boxplot AC010967.2 NA chr2 52722677 52910020 - 187344 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC010967.2 NA 0.012 20-30% NA NA NA NA NA boxplot UBE2V2P3 ubiquitin conjugating enzyme E2 variant 2 pseudogene 3 chr1 11278616 11279351 - 736 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=UBE2V2P3 NA 0.012 50-60% NA NA Normal NA NA boxplot KIR2DP1 killer cell immunoglobulin-like receptor, two domains, pseudogene 1 chr19 54755023 54767371 + 12349 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KIR2DP1 NA 0.212 60-70% Whole Blood 3.615762763 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CTD-2017F17.2 NA chr15 64950916 64951435 - 520 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2017F17.2 NA 0.388 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot LAP3P2 leucine aminopeptidase 3 pseudogene 2 chr6 36673817 36675270 + 1454 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LAP3P2 NA 0.6 60-70% Testis 4.906892038 CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-492I21.1 NA chr1 176017277 176018760 + 1484 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-492I21.1 NA 0.012 80-90% NA NA PAAD NA NA boxplot RP3-430N8.10 NA chr22 30977516 30977858 - 343 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-430N8.10 NA 0.176 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CTD-3035D6.1 NA chr14 90766531 90766989 + 459 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-3035D6.1 NA 0.106 90-100% NA NA HCC,Normal,PAAD NA NA boxplot RP11-327F22.6 NA chr16 50712844 50713589 + 746 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-327F22.6 NA 0.118 50-60% NA NA CRC,Normal NA NA boxplot RP11-1101H11.1 NA chr5 177682294 177713969 + 31676 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1101H11.1 NA 0.024 30-40% NA NA HCC,Normal NA NA boxplot HMGN2P34 high mobility group nucleosomal binding domain 2 pseudogene 34 chr10 72636497 72636765 - 269 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HMGN2P34 NA 0.012 80-90% Testis 4.906892038 Breast_cancer,HCC NA NA boxplot RP11-646I6.5 NA chr4 56387625 56388153 + 529 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-646I6.5 NA 0.118 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot FAM45BP family with sequence similarity 45, member A pseudogene chrX 130494965 130496588 + 1624 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FAM45BP NA 0.929 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),PAAD(down) NA boxplot AC018462.2 NA chr2 62069447 62146881 - 77435 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC018462.2 NA 0.235 50-60% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot RP11-1250I15.2 NA chr5 34105750 34106336 - 587 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1250I15.2 NA 0.012 40-50% NA NA CRC NA NA boxplot RP11-849F2.5 NA chr17 8365563 8381328 + 15766 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-849F2.5 NA 0.094 80-90% NA NA CRC,Normal,PAAD NA NA boxplot LOC401913 ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase) pseudogene chr19 34866352 34866919 + 568 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LOC401913 NA 0.012 60-70% Testis 4.068124767 Breast_cancer,Normal NA NA boxplot ZNF337-AS1 ZNF337 antisense RNA 1 chr20 25624045 25678074 + 54030 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ZNF337-AS1 exo_circ_011479 0.588 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up),PAAD(up) NA boxplot RP11-563D10.1 NA chr1 194149473 194198694 + 49222 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-563D10.1 NA 0.071 30-40% Liver 3.861933984 HCC,Normal,PAAD NA NA boxplot RP11-712L6.5 NA chr11 126294298 126304318 - 10021 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-712L6.5 NA 0.235 10-20% NA NA CRC,HCC,Normal NA NA boxplot RP11-805I24.3 NA chr16 86192793 86198913 - 6121 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-805I24.3 NA 0.059 20-30% Testis 3.59793438 Breast_cancer,HCC,Normal,PAAD NA NA boxplot RP11-344B2.3 NA chr18 32245946 32249032 - 3087 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-344B2.3 NA 0.035 90-100% Nerve 2.480556511 Normal NA NA boxplot RP11-356M20.1 NA chr15 59406963 59408154 - 1192 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-356M20.1 NA 0.518 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-222K16.1 NA chr3 27638315 27638776 + 462 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-222K16.1 NA 0.012 10-20% NA NA NA NA NA boxplot ATP6V0CP3 ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c pseudogene 3 chr6 42727234 42727700 + 467 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ATP6V0CP3 NA 0.047 30-40% NA NA CRC,HCC,Normal NA NA boxplot CH17-140K24.7 NA chr5 141183401 141201396 - 17996 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CH17-140K24.7 NA 0.047 80-90% NA NA HCC NA NA boxplot RP11-1017G21.6 NA chr14 101952416 101953063 + 648 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1017G21.6 NA 0.035 70-80% NA NA Breast_cancer,Normal,PAAD NA NA boxplot ALG1L15P asparagine-linked glycosylation 1-like 15, pseudogene chr3 156044155 156044948 - 794 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ALG1L15P NA 0.071 10-20% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot RP11-29G8.3 NA chr13 75549773 75807120 + 257348 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-29G8.3 NA 0.929 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),PAAD(up) NA boxplot RP11-165D6.1 NA chr13 46717423 46717688 + 266 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-165D6.1 NA 0.035 70-80% NA NA CRC,Normal NA NA boxplot RP13-228J13.1 NA chrX 155334858 155351957 - 17100 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP13-228J13.1 NA 0.365 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot LINC00433 long intergenic non-protein coding RNA 433 chr13 88540864 88545509 + 4646 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00433 exo_circ_016953 0.012 10-20% Testis 4.906892038 HCC NA NA boxplot ZNF649-AS1 ZNF649 antisense RNA 1 chr19 51888025 51900463 + 12439 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ZNF649-AS1 NA 0.059 80-90% NA NA Normal,PAAD NA NA boxplot CTD-2371O3.3 NA chr11 9459556 9460702 - 1147 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2371O3.3 NA 0.118 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-90L20.2 NA chr1 201723294 201737506 - 14213 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-90L20.2 NA 0.012 70-80% NA NA Breast_cancer,HCC,Normal NA NA boxplot RP11-266L9.4 NA chr16 25031744 25058109 + 26366 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-266L9.4 NA 0.341 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CTB-60E11.12 NA chr19 39584042 39586489 + 2448 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTB-60E11.12 NA 0.012 30-40% Testis 4.906892038 Breast_cancer,Normal NA NA boxplot RP11-138A9.2 NA chr7 130936464 130939661 + 3198 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-138A9.2 NA 0.012 90-100% NA NA CRC,PAAD NA NA boxplot RP11-454F8.3 NA chr16 53227146 53227694 + 549 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-454F8.3 NA 0.012 40-50% NA NA CRC NA NA boxplot FABP5P7 fatty acid binding protein 5 pseudogene 7 chr11 59781318 59781722 - 405 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FABP5P7 NA 1 0-10% Vagina 1.693696731 CHD,CRC,HCC,Normal,PAAD CHD(up),PAAD(up) NA boxplot RP11-950C14.7 NA chr14 75127153 75136930 + 9778 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-950C14.7 NA 0.024 80-90% NA NA Breast_cancer,CRC NA NA boxplot TFP1 transferrin pseudogene 1 chr3 133661998 133754576 + 92579 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TFP1 NA 0.141 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot WBP11P1 WW domain binding protein 11 pseudogene 1 chr18 32511663 32514634 + 2972 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=WBP11P1 NA 0.012 40-50% Testis 4.906892038 Breast_cancer,HCC NA NA boxplot WI2-1896O14.1 NA chr1 149197992 149321732 - 123741 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=WI2-1896O14.1 NA 0.729 10-20% NA NA CRC,HCC,Normal,PAAD CHD(down) NA boxplot ISM1-AS1 ISM1 antisense RNA 1 chr20 13237801 13239674 - 1874 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ISM1-AS1 NA 0.024 30-40% Testis 1.555309052 CRC NA NA boxplot AC020550.7 NA chr2 197533803 197533965 + 163 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC020550.7 NA 0.035 50-60% NA NA CRC,PAAD NA NA boxplot RP11-823E8.3 NA chr12 89351015 89353271 + 2257 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-823E8.3 NA 0.824 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot RP11-114H24.6 NA chr15 77993405 77995289 + 1885 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-114H24.6 NA 0.082 20-30% NA NA Breast_cancer,CRC,HCC,PAAD NA NA boxplot RP11-763E3.1 NA chr17 55842677 55872939 - 30263 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-763E3.1 NA 0.024 70-80% NA NA Normal NA NA boxplot PDHA1P1 pyruvate dehydrogenase (lipoamide) alpha 1 pseudogene 1 chr3 57800056 57801448 - 1393 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PDHA1P1 NA 0.012 90-100% NA NA HCC NA NA boxplot RPLP0P2 ribosomal protein, large, P0 pseudogene 2 chr11 61615036 61639449 + 24414 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPLP0P2 NA 0.035 60-70% NA NA Breast_cancer,CHD,HCC,PAAD NA NA boxplot XXbac-B444P24.13 NA chr22 20318119 20318749 - 631 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=XXbac-B444P24.13 NA 0.059 50-60% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot RP11-181D18.4 NA chr8 73511276 73511654 - 379 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-181D18.4 NA 0.071 50-60% NA NA CRC,Normal,PAAD NA NA boxplot RP11-1148L6.5 NA chrX 48579774 48581157 - 1384 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1148L6.5 NA 0.271 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-672L10.6 NA chr18 813274 813756 + 483 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-672L10.6 NA 0.506 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot ARRDC3-AS1 ARRDC3 antisense RNA 1 chr5 91380349 91439085 + 58737 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ARRDC3-AS1 NA 0.576 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot RP3-337O18.9 NA chr20 45892694 45893419 - 726 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-337O18.9 NA 0.541 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-496N12.9 NA chr1 225465021 225473837 + 8817 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-496N12.9 exo_circ_053211 0.412 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot BMS1P8 BMS1, ribosome biogenesis factor pseudogene 8 chr16 33687025 33698504 - 11480 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=BMS1P8 NA 0.071 30-40% NA NA CRC,HCC,PAAD NA NA boxplot API5P1 apoptosis inhibitor 5 pseudogene 1 chrX 116106921 116108430 - 1510 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=API5P1 NA 0.976 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CRC(down) NA boxplot RP11-181G12.2 NA chr1 2181794 2184389 - 2596 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-181G12.2 NA 0.376 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC128709.2 NA chr3 197458405 197467105 + 8701 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC128709.2 NA 0.012 10-20% NA NA Breast_cancer,Normal NA NA boxplot RP11-359E19.2 NA chr8 40114651 40127468 + 12818 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-359E19.2 NA 0.012 50-60% Testis 3.409666958 Breast_cancer,PAAD NA NA boxplot COL18A1-AS2 COL18A1 antisense RNA 2 chr21 45407386 45410065 - 2680 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=COL18A1-AS2 NA 0.024 90-100% NA NA Breast_cancer,HCC NA NA boxplot RP11-59D5__B.2 NA chr6 63806836 63822642 + 15807 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-59D5__B.2 NA 0.506 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD PAAD(up) NA boxplot RP11-152F13.8 NA chr15 82418651 82434235 + 15585 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-152F13.8 NA 0.576 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-305L7.5 NA chr9 91169585 91170045 - 461 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-305L7.5 NA 0.012 90-100% NA NA CRC NA NA boxplot RP11-1252D15.1 NA chr2 87055658 87055800 - 143 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1252D15.1 NA 0.8 10-20% NA NA CRC,HCC,Normal,PAAD CHD(down) NA boxplot AC092646.2 NA chr2 123762171 123763071 + 901 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC092646.2 NA 0.012 20-30% Testis 4.906892038 Normal NA NA boxplot RP4-613B23.1 NA chr3 42601963 42654388 - 52426 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-613B23.1 NA 0.329 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CNTN4-AS1 CNTN4 antisense RNA 1 chr3 3039033 3069242 - 30210 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CNTN4-AS1 NA 0.353 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down) NA boxplot RP11-157B13.10 NA chr19 22215634 22215661 - 28 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-157B13.10 NA 0.024 30-40% NA NA HCC NA NA boxplot RP11-211G23.2 NA chr11 69371463 69372512 + 1050 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-211G23.2 NA 0.271 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-40H19.1 NA chr11 40083710 40084517 - 808 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-40H19.1 NA 0.012 50-60% NA NA PAAD NA NA boxplot ANKRD20A18P ankyrin repeat domain 20 family member A18, pseudogene chr21 14064325 14069087 + 4763 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ANKRD20A18P NA 0.012 40-50% Testis 2.107083678 Breast_cancer NA NA boxplot AC007395.4 NA chr2 70810798 70811474 - 677 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC007395.4 NA 0.012 0-10% NA NA Normal NA NA boxplot RP11-412H8.2 NA chr14 28592223 28613623 - 21401 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-412H8.2 NA 0.012 40-50% Salivary Gland 4.589510125 NA NA NA boxplot RP11-554D13.1 NA chr4 94675245 94702570 + 27326 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-554D13.1 NA 0.035 80-90% NA NA CRC,HCC NA NA boxplot LL22NC03-80A10.11 NA chr22 22339573 22341214 + 1642 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LL22NC03-80A10.11 NA 0.047 70-80% Testis 2.030184939 Breast_cancer,CRC,PAAD NA NA boxplot CTD-2034I4.2 NA chr15 81554003 81696780 + 142778 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2034I4.2 NA 0.047 20-30% NA NA CRC,HCC,PAAD NA NA boxplot HNRNPA3P1 heterogeneous nuclear ribonucleoprotein A3 pseudogene 1 chr10 43789249 43790387 - 1139 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HNRNPA3P1 NA 0.459 50-60% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP4-781K5.4 NA chr1 234646289 234683176 + 36888 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-781K5.4 NA 0.024 80-90% Testis 3.508895032 Breast_cancer,HCC NA NA boxplot AC145343.2 NA chr17 68096046 68101474 - 5429 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC145343.2 NA 0.047 20-30% Testis 1.245058411 CRC,HCC,Normal,PAAD NA NA boxplot RP11-381O7.3 NA chr9 63111255 63127100 - 15846 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-381O7.3 NA 0.118 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot AC005775.2 NA chr19 490046 507833 - 17788 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC005775.2 NA 0.059 60-70% NA NA CRC,HCC,Normal NA NA boxplot LINC00862 long intergenic non-protein coding RNA 862 chr1 200253419 200400705 - 147287 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00862 NA 0.176 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot GS1-21A4.2 NA chr16 87892955 87893735 + 781 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GS1-21A4.2 NA 0.012 90-100% NA NA Normal NA NA boxplot RP11-327F22.5 NA chr16 50806668 50807629 + 962 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-327F22.5 NA 0.012 90-100% Testis 4.906892038 NA NA NA boxplot RP1-258N20.3 NA chrX 25029545 25030235 + 691 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-258N20.3 NA 0.012 90-100% NA NA Breast_cancer NA NA boxplot RP11-368I23.2 NA chr3 168903366 168921996 + 18631 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-368I23.2 NA 0.024 40-50% Pituitary 2.40167584 HCC,PAAD NA NA boxplot RP11-879F14.3 NA chr18 61571342 61579456 - 8115 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-879F14.3 exo_circ_034714,exo_circ_034713 0.8 0-10% Testis 1.805547557 CRC,HCC,Normal,PAAD CHD(down),HCC(down) NA boxplot CTD-2315E11.1 NA chr15 90102649 90133445 + 30797 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2315E11.1 NA 0.012 90-100% Brain 2.653434223 Normal NA NA boxplot PP7080 uncharacterized LOC25845 chr5 466124 473098 - 6975 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PP7080 NA 0.859 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down),CRC(down) NA boxplot RP11-158L12.6 NA chr12 125160525 125164918 + 4394 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-158L12.6 NA 0.012 70-80% NA NA Breast_cancer NA NA boxplot SIGLEC22P sialic acid binding Ig-like lectin 22, pseudogene chr19 51211080 51212088 + 1009 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SIGLEC22P NA 0.859 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up) NA boxplot RP11-2H3.6 NA chr4 416118 416537 - 420 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-2H3.6 NA 0.047 10-20% NA NA Normal NA NA boxplot USP46-AS1 USP46 antisense RNA 1 chr4 52659406 52661668 + 2263 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=USP46-AS1 NA 0.682 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down) NA boxplot RP11-283G6.3 NA chr12 26125155 26126617 - 1463 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-283G6.3 NA 0.165 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot PITPNA-AS1 PITPNA antisense RNA 1 chr17 1516931 1518096 + 1166 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PITPNA-AS1 NA 0.953 0-10% NA NA CHD,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down) NA boxplot LINC01555 long intergenic non-protein coding RNA 1555 chr1 84628230 84635020 - 6791 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01555 NA 0.012 60-70% NA NA NA NA NA boxplot RP1-228P16.1 NA chr12 48054813 48055591 - 779 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-228P16.1 NA 0.106 40-50% NA NA CRC,Normal,PAAD NA NA boxplot CTD-2306M5.1 NA chr5 25404733 25445925 - 41193 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2306M5.1 NA 0.012 80-90% NA NA Breast_cancer,PAAD NA NA boxplot KLF2P3 Kruppel-like factor 2 pseudogene 3 chr2 130692243 130693770 - 1528 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KLF2P3 NA 0.012 50-60% NA NA Breast_cancer,HCC NA NA boxplot AC011747.4 NA chr2 8559833 8583792 - 23960 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC011747.4 NA 0.259 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AP000240.9 NA chr21 29359002 29359453 + 452 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AP000240.9 NA 0.129 60-70% NA NA CRC,HCC,Normal NA NA boxplot AC018804.6 NA chr2 130202312 130212628 + 10317 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC018804.6 NA 0.906 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),HCC(down) NA boxplot RP11-489O18.1 NA chr8 138063268 138073240 + 9973 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-489O18.1 NA 0.035 70-80% Spleen 2.37335624 HCC,PAAD NA NA boxplot BTF3L4P2 basic transcription factor 3-like 4 pseudogene 2 chr2 159003975 159004320 + 346 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=BTF3L4P2 NA 1 0-10% NA NA CHD,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-963H1.1 NA chr3 70125070 70126609 - 1540 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-963H1.1 NA 0.153 70-80% Testis 4.906892038 CRC,HCC,Normal,PAAD NA NA boxplot AC078899.1 NA chr19 20257720 20259418 + 1699 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC078899.1 NA 0.918 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-82O19.1 NA chr17 29761103 29787836 + 26734 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-82O19.1 NA 0.212 60-70% NA NA CRC,HCC,Normal NA NA boxplot RP11-13A1.3 NA chr12 89048187 89309553 - 261367 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-13A1.3 NA 0.047 40-50% Testis 4.236525725 HCC,Normal,PAAD NA NA boxplot MIR548XHG MIR548X host gene chr21 18561265 18760003 - 198739 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MIR548XHG NA 0.024 60-70% NA NA PAAD NA NA boxplot FAAHP1 fatty acid amide hydrolase pseudogene 1 chr1 46432129 46482493 + 50365 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FAAHP1 exo_circ_009578 0.176 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot TOMM20P4 TOMM20 pseudogene 4 chrX 73223124 73223558 + 435 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TOMM20P4 NA 0.953 0-10% NA NA CHD,CRC,HCC,Normal,PAAD CRC(down),HCC(down) NA boxplot KRT87P keratin 87 pseudogene chr12 52250466 52258867 - 8402 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KRT87P NA 0.024 80-90% NA NA Breast_cancer,HCC NA NA boxplot RP5-890O3.9 NA chr1 1317581 1318689 - 1109 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-890O3.9 NA 0.106 60-70% NA NA Breast_cancer,CRC,Normal NA NA boxplot RP11-713N11.4 NA chr12 25096868 25100980 - 4113 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-713N11.4 NA 0.071 40-50% Testis 3.531100572 CRC,HCC,Normal NA NA boxplot RP1-313L4.4 NA chr1 167819898 167820248 - 351 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-313L4.4 NA 0.024 70-80% Testis 4.467195461 CRC NA NA boxplot RP11-44N12.2 NA chr8 98961428 98968284 + 6857 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-44N12.2 NA 0.012 60-70% NA NA Breast_cancer NA NA boxplot RP11-141M3.6 NA chr3 42809414 42908105 + 98692 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-141M3.6 NA 0.212 40-50% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot RP11-348N5.9 NA chr10 110907483 110908182 + 700 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-348N5.9 NA 0.165 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot PKN2-AS1 PKN2 antisense RNA 1 chr1 88537513 88685204 - 147692 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PKN2-AS1 exo_circ_029722,exo_circ_031496,exo_circ_053424,exo_circ_052516 0.553 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot AC006014.8 NA chr7 75391955 75395434 - 3480 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC006014.8 NA 0.153 60-70% Testis 3.816412129 HCC,Normal,PAAD NA NA boxplot MCCD1P2 mitochondrial coiled-coil domain 1 pseudogene 2 chr6 29994437 29995314 - 878 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MCCD1P2 NA 0.059 70-80% Testis 2.595373376 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-480G3.1 NA chr4 10143367 10143655 - 289 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-480G3.1 NA 0.012 80-90% Testis 4.906892038 Breast_cancer,CRC NA NA boxplot LINC01058 long intergenic non-protein coding RNA 1058 chr13 30419519 30422237 - 2719 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01058 NA 0.129 60-70% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot RP1-12G14.9 NA chr6 149576089 149590864 - 14776 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-12G14.9 NA 0.071 50-60% NA NA HCC,Normal,PAAD NA NA boxplot RP11-15F12.1 NA chr18 49023703 49048474 + 24772 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-15F12.1 NA 0.071 0-10% NA NA Breast_cancer,CRC,Normal NA NA boxplot RP5-828H9.1 NA chr20 5471207 5475182 + 3976 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-828H9.1 NA 0.071 50-60% Testis 4.171996569 Breast_cancer,CRC,HCC,PAAD NA NA boxplot RP11-800A18.4 NA chr18 79340258 79343972 - 3715 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-800A18.4 NA 0.082 60-70% NA NA CRC,Normal,PAAD NA NA boxplot CH17-164J11.1 NA chr1 144754572 144786606 - 32035 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CH17-164J11.1 NA 0.012 90-100% NA NA Breast_cancer,HCC NA NA boxplot XXbac-B476C20.14 NA chr22 17983205 17983619 - 415 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=XXbac-B476C20.14 NA 0.059 50-60% Brain 4.906892038 CRC,Normal NA NA boxplot RPL23AP87 ribosomal protein L23a pseudogene 87 chr17 83226897 83240804 + 13908 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL23AP87 NA 0.565 10-20% NA NA CRC,HCC,Normal,PAAD CRC(up),PAAD(up) NA boxplot SEC24B-AS1 SEC24B antisense RNA 1 chr4 109347475 109433817 - 86343 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SEC24B-AS1 NA 0.282 30-40% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot LA16c-60D12.1 NA chr22 15282557 15288670 - 6114 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LA16c-60D12.1 NA 0.024 20-30% NA NA CRC,HCC NA NA boxplot AC079807.2 NA chr2 47905678 47907810 + 2133 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC079807.2 NA 0.494 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CTD-2199O4.6 NA chr5 10203600 10204040 - 441 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2199O4.6 NA 0.047 40-50% NA NA CRC,HCC NA NA boxplot RP11-802O23.3 NA chr3 58428255 58428815 + 561 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-802O23.3 NA 0.529 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-596C23.2 NA chr14 49863072 49864379 + 1308 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-596C23.2 NA 0.106 50-60% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot RP11-227G15.9 NA chr17 32430967 32432841 + 1875 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-227G15.9 NA 0.024 40-50% NA NA Normal,PAAD NA NA boxplot B3GAT3P1 beta-1,3-glucuronyltransferase 3 pseudogene 1 chr3 160452598 160453403 + 806 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=B3GAT3P1 NA 0.118 90-100% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot BACE1-AS BACE1 antisense RNA chr11 117290874 117293571 + 2698 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=BACE1-AS NA 0.765 10-20% NA NA CHD,CRC,HCC,Normal,PAAD CHD(down),CRC(down) NA boxplot RPL23P2 ribosomal protein L23 pseudogene 2 chr21 28997613 28998033 - 421 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL23P2 NA 0.035 70-80% NA NA Normal NA NA boxplot NSRP1P1 nuclear speckle splicing regulatory protein 1 pseudogene 1 chr1 77847110 77848802 + 1693 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NSRP1P1 NA 0.271 10-20% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP3-523C21.2 NA chr6 132085084 132099279 + 14196 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-523C21.2 exo_circ_055090,exo_circ_031792,exo_circ_019031,exo_circ_029424,exo_circ_049717,exo_circ_042322 0.576 10-20% NA NA CRC,HCC,Normal,PAAD CHD(down) NA boxplot AC015987.1 NA chr7 135926455 135932881 + 6427 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC015987.1 NA 0.129 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot LINC00511 long intergenic non-protein coding RNA 511 chr17 72323123 72640472 - 317350 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00511 NA 0.129 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD PAAD(up) NA boxplot AC005523.3 NA chr19 4785120 4791207 - 6088 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC005523.3 NA 0.035 30-40% Testis 2.068196504 HCC,PAAD NA NA boxplot RPLP1P11 ribosomal protein, large, P1 pseudogene 11 chr17 16044621 16044961 + 341 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPLP1P11 NA 0.024 40-50% NA NA Normal,PAAD NA NA boxplot AC141930.2 NA chr2 1572554 1580311 - 7758 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC141930.2 NA 0.024 40-50% Testis 4.042587559 PAAD NA NA boxplot RP11-274E7.2 NA chr5 98213402 98214121 + 720 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-274E7.2 NA 0.4 80-90% NA NA CRC,HCC,Normal,PAAD NA NA boxplot AC006946.16 NA chr22 17067821 17070675 + 2855 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC006946.16 NA 0.106 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-574O7.1 NA chr8 105142860 105188606 - 45747 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-574O7.1 NA 0.012 20-30% Testis 2.146421714 HCC NA NA boxplot RP11-573N10.1 NA chr13 98233650 98234700 + 1051 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-573N10.1 NA 0.012 10-20% Salivary Gland 3.996813795 NA NA NA boxplot RP11-541M12.6 NA chr10 48443836 48445820 - 1985 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-541M12.6 NA 0.047 50-60% NA NA Breast_cancer,Normal NA NA boxplot CTC-338M12.9 NA chr5 181281375 181283652 + 2278 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-338M12.9 NA 0.024 30-40% NA NA CRC,Normal NA NA boxplot TCEB1P2 transcription elongation factor B (SIII), polypeptide 1 pseudogene 2 chr15 41557027 41557435 + 409 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TCEB1P2 NA 0.529 60-70% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot BCL9P1 B-cell CLL/lymphoma 9 pseudogene 1 chr5 67636382 67638942 + 2561 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=BCL9P1 NA 0.012 10-20% NA NA Breast_cancer,CRC NA NA boxplot AC010731.6 NA chr2 206686517 206687362 - 846 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC010731.6 NA 0.024 50-60% NA NA Breast_cancer,CRC,PAAD NA NA boxplot GS1-309P15.4 NA chrX 27517884 27519759 + 1876 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GS1-309P15.4 NA 0.024 90-100% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot RP11-265O12.1 NA chr4 4321962 4334182 + 12221 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-265O12.1 NA 0.765 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot DNAJC27-AS1 DNAJC27 antisense RNA 1 chr2 24971390 25039694 + 68305 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DNAJC27-AS1 NA 0.447 30-40% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-98I9.4 NA chr6 99424922 99431373 + 6452 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-98I9.4 exo_circ_037185 0.729 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),PAAD(up) NA boxplot RP11-362F19.2 NA chr4 141405172 141407586 + 2415 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-362F19.2 NA 0.094 20-30% Thyroid 4.906892038 CRC,Normal NA NA boxplot AC005264.2 NA chr19 3141576 3155175 - 13600 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC005264.2 NA 0.224 50-60% Lung 1.54623728 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP1-30M3.6 NA chr6 24706747 24707151 + 405 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-30M3.6 NA 0.047 10-20% NA NA Normal,PAAD NA NA boxplot ITGB2-AS1 ITGB2 antisense RNA 1 chr21 44921051 44929678 + 8628 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ITGB2-AS1 NA 0.941 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up) NA boxplot CTD-2515H24.4 NA chr15 57527187 57529009 - 1823 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2515H24.4 NA 0.235 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-242D8.2 NA chr17 43168170 43168249 - 80 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-242D8.2 NA 0.024 60-70% NA NA CRC NA NA boxplot HNRNPA1P66 heterogeneous nuclear ribonucleoprotein A1 pseudogene 66 chr2 63751697 63752630 - 934 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HNRNPA1P66 NA 0.012 90-100% NA NA Breast_cancer,HCC,Normal NA NA boxplot RP11-4C20.4 NA chr10 127934698 127936167 + 1470 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-4C20.4 NA 0.224 30-40% Testis 1.161559142 CRC,HCC,Normal,PAAD NA NA boxplot RP11-860B13.3 NA chr12 27798641 27800708 - 2068 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-860B13.3 NA 0.024 70-80% NA NA HCC NA NA boxplot RP11-253E3.3 NA chr12 3041437 3044950 + 3514 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-253E3.3 NA 0.918 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),HCC(up),PAAD(up) NA boxplot OR2L8 olfactory receptor family 2 subfamily L member 8 (gene/pseudogene) chr1 247948858 247949796 + 939 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=OR2L8 NA 0.012 80-90% NA NA HCC NA NA boxplot LL22NC03-104C7.1 uncharacterized LOC105373004 chr22 32583300 32584204 + 905 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LL22NC03-104C7.1 NA 0.059 40-50% NA NA HCC,Normal,PAAD NA NA boxplot PCED1B-AS1 PCED1B antisense RNA 1 chr12 47205898 47216456 - 10559 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PCED1B-AS1 NA 1 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down),PAAD(down) NA boxplot CASK-AS1 CASK antisense RNA 1 chrX 41520036 41522336 + 2301 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CASK-AS1 NA 0.047 30-40% NA NA Breast_cancer,HCC,Normal NA NA boxplot SNX18P14 sorting nexin 18 pseudogene 14 chr2 94786688 94787261 - 574 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SNX18P14 NA 0.024 30-40% NA NA Breast_cancer,PAAD NA NA boxplot RP5-1139I1.2 NA chrX 119356301 119393595 - 37295 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-1139I1.2 NA 0.024 60-70% Fallopian Tube 3.992218027 Breast_cancer,Normal NA NA boxplot SMG6-IT1 SMG6 intronic transcript 1 chr17 2235713 2236086 - 374 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SMG6-IT1 NA 0.047 90-100% NA NA CRC,Normal NA NA boxplot RP11-439E19.6 NA chr1 246755511 246755832 - 322 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-439E19.6 NA 0.012 60-70% Nerve 1.556441681 Breast_cancer,Normal NA NA boxplot AL163953.3 NA chr14 53169054 53687258 + 518205 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AL163953.3 NA 0.271 30-40% Testis 1.207511435 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-82K18.2 NA chr1 88923370 88923844 + 475 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-82K18.2 NA 0.035 20-30% NA NA Normal NA NA boxplot RP11-234K24.6 NA chr20 36233851 36234297 + 447 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-234K24.6 NA 0.035 60-70% NA NA HCC,Normal NA NA boxplot RP3-508I15.22 NA chr22 38743495 38743910 + 416 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-508I15.22 NA 0.012 90-100% NA NA Breast_cancer NA NA boxplot LINC01388 long intergenic non-protein coding RNA 1388 chr9 112713 113754 - 1042 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01388 NA 0.035 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC026150.6 NA chr15 30516079 30517867 + 1789 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC026150.6 NA 0.412 40-50% Testis 1.290557914 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-231C14.7 NA chr16 29291220 29372110 + 80891 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-231C14.7 NA 0.929 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP1-111C20.4 NA chr6 158988178 159064925 + 76748 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-111C20.4 NA 0.576 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot BBOX1-AS1 BBOX1 antisense RNA 1 chr11 27047186 27220113 - 172928 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=BBOX1-AS1 NA 0.235 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-427L15.2 NA chr10 118692361 118693535 - 1175 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-427L15.2 NA 0.165 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot AC005785.5 NA chr19 15383202 15383832 - 631 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC005785.5 NA 0.059 50-60% NA NA CRC,Normal,PAAD NA NA boxplot GPAA1P2 glycosylphosphatidylinositol anchor attachment 1 pseudogene 2 chr2 110386377 110388163 - 1787 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GPAA1P2 NA 0.341 70-80% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot ZDHHC8P1 zinc finger, DHHC-type containing 8 pseudogene 1 chr22 23390606 23402726 - 12121 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ZDHHC8P1 NA 0.118 20-30% Ovary 1.858523227 Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot AC002116.7 NA chr19 36014508 36045972 + 31465 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC002116.7 NA 0.294 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-128B16.5 NA chr10 26577676 26622338 - 44663 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-128B16.5 NA 0.024 10-20% NA NA Normal NA NA boxplot RP11-268G12.3 NA chrX 27042907 27176298 - 133392 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-268G12.3 NA 0.047 70-80% NA NA Breast_cancer,CRC,HCC,PAAD NA NA boxplot RPL12P17 ribosomal protein L12 pseudogene 17 chr2 208057248 208057745 - 498 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL12P17 NA 0.235 90-100% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot AC147651.5 NA chr7 561958 565619 + 3662 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC147651.5 NA 0.012 0-10% NA NA Breast_cancer,Normal NA NA boxplot AC096582.8 NA chr7 45816557 45821064 + 4508 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC096582.8 NA 0.012 60-70% Testis 4.906892038 Normal,PAAD NA NA boxplot RPL4P6 ribosomal protein L4 pseudogene 6 chr22 40586700 40588003 - 1304 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL4P6 exo_circ_058172,exo_circ_058173 0.588 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-830F9.6 NA chr16 88939789 88951524 + 11736 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-830F9.6 NA 0.176 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot PRR13P2 proline rich 13 pseudogene 2 chr11 9311284 9311689 - 406 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PRR13P2 exo_circ_050886 0.047 70-80% NA NA CRC NA NA boxplot SPDYE17 speedy/RINGO cell cycle regulator family member E17 chr7 77024691 77030572 - 5882 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SPDYE17 NA 0.035 80-90% NA NA CRC,HCC NA NA boxplot RP11-177B4.1 NA chr4 52720081 52720831 - 751 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-177B4.1 NA 0.047 30-40% NA NA CRC,HCC,Normal NA NA boxplot TTC4P1 tetratricopeptide repeat domain 4 pseudogene 1 chr7 45999621 46000778 - 1158 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TTC4P1 NA 0.012 10-20% NA NA Breast_cancer,Normal NA NA boxplot HBZP1 hemoglobin subunit zeta pseudogene 1 chr16 163122 165156 + 2035 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HBZP1 NA 0.529 10-20% Testis 4.906892038 CHD,CRC,HCC,Normal,PAAD CHD(up),HCC(up) NA boxplot RP11-180C1.1 NA chr4 28362279 28402864 - 40586 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-180C1.1 NA 0.094 30-40% Testis 4.906892038 Breast_cancer,CRC,Normal,PAAD NA NA boxplot OR5BS1P olfactory receptor family 5 subfamily BS member 1 pseudogene chr12 48559882 48562956 + 3075 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=OR5BS1P NA 0.012 90-100% Testis 4.906892038 PAAD NA NA boxplot AC004535.2 NA chr7 10702676 10707406 + 4731 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC004535.2 NA 0.012 50-60% Testis 4.906892038 Normal NA NA boxplot RP3-453I5.2 NA chr6 90116700 90117105 - 406 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-453I5.2 NA 0.153 40-50% NA NA CRC,Normal NA NA boxplot LINC01184 long intergenic non-protein coding RNA 1184 chr5 127940426 128083172 - 142747 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01184 exo_circ_054751,exo_circ_044166,exo_circ_027674,exo_circ_049438,exo_circ_026409 0.988 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down) NA boxplot AP001442.2 NA chr21 25928754 25942686 + 13933 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AP001442.2 NA 0.012 70-80% Testis 2.335778194 HCC NA NA boxplot MTND5P26 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 5 pseudogene 26 chrX 102803041 102806138 + 3098 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MTND5P26 NA 0.024 30-40% NA NA Normal NA NA boxplot RP11-658F2.8 NA chr11 66666036 66668374 + 2339 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-658F2.8 NA 0.906 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-726G1.1 NA chr12 9467552 9576275 + 108724 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-726G1.1 exo_circ_029833 0.741 0-10% Testis 1.158271767 Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot BISPR BST2 interferon stimulated positive regulator (non-protein coding) chr19 17405694 17418904 + 13211 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=BISPR NA 0.976 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot CDCA4P1 cell division cycle associated 4 pseudogene 1 chr9 14593577 14594200 + 624 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CDCA4P1 NA 0.012 80-90% NA NA Breast_cancer,HCC NA NA boxplot AF131217.1 NA chr21 28439346 28674848 - 235503 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AF131217.1 exo_circ_021306,exo_circ_002997 0.553 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot KIRREL3-AS1 KIRREL3 antisense RNA 1 chr11 126543947 126610948 + 67002 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KIRREL3-AS1 NA 0.012 30-40% Salivary Gland 3.740207365 Breast_cancer NA NA boxplot ZNF30-AS1 ZNF30 antisense RNA 1 chr19 34923299 34926812 - 3514 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ZNF30-AS1 NA 0.024 20-30% NA NA Normal NA NA boxplot RP11-799D4.2 NA chr17 35188522 35191343 + 2822 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-799D4.2 NA 0.047 80-90% NA NA Breast_cancer,Normal,PAAD NA NA boxplot STAG3L5P stromal antigen 3-like 5 pseudogene chr7 100336079 100351900 + 15822 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=STAG3L5P NA 0.835 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down),HCC(down),PAAD(up) NA boxplot RP11-384K6.8 NA chr4 118664087 118685341 - 21255 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-384K6.8 NA 0.059 40-50% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot DBF4P1 DBF4 zinc finger pseudogene 1 chr10 64168959 64170850 - 1892 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DBF4P1 NA 0.518 40-50% Testis 1.596562519 CRC,HCC,Normal,PAAD NA NA boxplot AP000255.6 NA chr21 31735732 31736407 + 676 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AP000255.6 NA 0.165 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot HMGB3P14 high mobility group box 3 pseudogene 14 chr3 134170487 134171085 + 599 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HMGB3P14 NA 0.012 40-50% NA NA PAAD NA NA boxplot LINC01533 long intergenic non-protein coding RNA 1533 chr19 32025862 32056865 + 31004 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01533 NA 0.012 10-20% NA NA Breast_cancer,HCC NA NA boxplot SKINT1L Skint1 like (pseudogene) chr1 48096092 48182428 - 86337 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SKINT1L exo_circ_043271 0.082 70-80% NA NA CRC,HCC,Normal NA NA boxplot RP11-460N20.3 NA chr7 65038372 65038565 + 194 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-460N20.3 NA 0.141 70-80% NA NA CRC,HCC,Normal,PAAD NA NA boxplot AC073115.7 NA chr7 45990905 46000898 + 9994 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC073115.7 NA 0.188 30-40% Testis 2.928489022 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-490G8.1 NA chr12 95467397 95467861 - 465 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-490G8.1 NA 0.871 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot NDUFAF4P2 NADH:ubiquinone oxidoreductase complex assembly factor 4 pseudogene 2 chr7 93844789 93845308 + 520 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NDUFAF4P2 NA 0.024 50-60% NA NA PAAD NA NA boxplot BFSP2-AS1 BFSP2 antisense RNA 1 chr3 133429269 133455776 - 26508 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=BFSP2-AS1 NA 0.082 80-90% Small Intestine 2.936402664 CRC,HCC,Normal,PAAD NA NA boxplot HNRNPA1P26 heterogeneous nuclear ribonucleoprotein A1 pseudogene 26 chrX 100855288 100856379 - 1092 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HNRNPA1P26 NA 0.012 90-100% Colon 3.861089771 Breast_cancer NA NA boxplot AP003774.6 NA chr11 64394342 64395831 - 1490 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AP003774.6 NA 0.659 10-20% Whole Blood 2.342094874 Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),HCC(up),PAAD(up) NA boxplot LLNLR-304A6.2 NA chr19 2013728 2014656 - 929 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LLNLR-304A6.2 NA 0.2 80-90% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-18H21.2 NA chr4 152146385 152178573 - 32189 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-18H21.2 NA 0.012 90-100% Testis 4.906892038 Breast_cancer,CRC NA NA boxplot CTC-506B8.1 NA chr5 96741079 96742698 - 1620 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-506B8.1 NA 0.341 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-420J11.2 NA chr3 180414174 180422506 + 8333 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-420J11.2 NA 0.012 90-100% Testis 4.906892038 Normal NA NA boxplot CYP4A22-AS1 CYP4A22 antisense RNA 1 chr1 47096653 47179271 - 82619 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CYP4A22-AS1 exo_circ_018644 0.471 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP3-331H24.6 NA chr6 71386852 71390829 - 3978 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-331H24.6 NA 0.035 0-10% NA NA Breast_cancer,PAAD NA NA boxplot OR2A9P olfactory receptor family 2 subfamily A member 9 pseudogene chr7 144294480 144300934 + 6455 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=OR2A9P NA 0.541 40-50% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP1-37C10.3 NA chr1 16978926 17005091 + 26166 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-37C10.3 NA 0.071 80-90% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot KLHL2P1 kelch like family member 2 pseudogene 1 chr4 119334329 119378233 + 43905 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KLHL2P1 NA 0.365 60-70% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot AC046143.3 NA chr3 194632923 194645401 + 12479 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC046143.3 NA 0.247 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-259F16.3 NA chr10 69161530 69161906 - 377 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-259F16.3 NA 0.012 90-100% NA NA HCC NA NA boxplot RP11-165J3.5 NA chr9 93430342 93431299 - 958 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-165J3.5 NA 0.024 50-60% Testis 4.125820439 Breast_cancer,HCC NA NA boxplot RP11-439C15.5 NA chr8 1974818 1975314 + 497 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-439C15.5 NA 0.012 20-30% NA NA CRC NA NA boxplot RP11-693N9.2 NA chr11 104901549 104919073 - 17525 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-693N9.2 NA 0.918 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-159H3.1 NA chr10 121133090 121133723 - 634 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-159H3.1 NA 0.012 80-90% Testis 4.906892038 Breast_cancer,HCC,PAAD NA NA boxplot TTLL13P tubulin tyrosine ligase like 13, pseudogene chr15 90249530 90265482 + 15953 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TTLL13P NA 0.188 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CTC-527H23.1 NA chr16 48600176 48600644 + 469 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-527H23.1 NA 0.012 50-60% NA NA HCC NA NA boxplot WDR95P WD repeat domain 95, pseudogene chr13 31063306 31115699 + 52394 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=WDR95P NA 0.012 20-30% NA NA Breast_cancer,CHD NA NA boxplot RP5-1009E24.9 NA chr20 3811384 3823882 + 12499 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-1009E24.9 NA 0.271 70-80% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RNF219-AS1 RNF219 antisense RNA 1 chr13 77919689 78617328 + 697640 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RNF219-AS1 NA 0.106 60-70% Brain 3.026619321 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-700J17.2 NA chr4 44704405 44704965 + 561 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-700J17.2 NA 0.188 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot MYL12BP1 myosin light chain 12B pseudogene 1 chr15 42571927 42572433 + 507 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MYL12BP1 NA 0.247 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-573E11.2 NA chr11 12303533 12308216 + 4684 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-573E11.2 NA 0.024 60-70% NA NA CRC NA NA boxplot RP11-719K4.7 NA chr16 14862380 14862749 - 370 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-719K4.7 NA 0.282 30-40% Testis 4.906892038 CRC,HCC,Normal,PAAD NA NA boxplot RP11-559M23.1 NA chr2 44167625 44168859 - 1235 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-559M23.1 NA 0.035 90-100% Testis 4.147417242 Breast_cancer,CRC,Normal NA NA boxplot PRELID1P4 PRELI domain containing 1 pseudogene 4 chr15 35121573 35122084 - 512 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PRELID1P4 NA 0.012 30-40% NA NA Breast_cancer,PAAD NA NA boxplot LINC00526 long intergenic non-protein coding RNA 526 chr18 5236724 5238598 - 1875 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00526 NA 0.494 30-40% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-248G5.9 NA chr13 52128891 52132723 + 3833 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-248G5.9 NA 0.012 50-60% NA NA Breast_cancer,HCC NA NA boxplot AP001257.1 NA chr11 60159687 60160822 - 1136 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AP001257.1 NA 0.059 60-70% NA NA CRC,Normal,PAAD NA NA boxplot RP1-102G20.2 NA chr1 174892417 174893155 + 739 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-102G20.2 NA 0.012 90-100% Fallopian Tube 4.906892038 CRC NA NA boxplot WBP1LP12 WW domain binding protein 1-like pseudogene 12 chr6 95124 95454 + 331 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=WBP1LP12 NA 0.012 90-100% NA NA HCC NA NA boxplot XX-FW83563B9.5 NA chrX 154396878 154398816 - 1939 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=XX-FW83563B9.5 NA 0.859 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down) NA boxplot MIR3180-3 microRNA 3180-3 chr16 18402178 18402271 - 94 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MIR3180-3 NA 0.024 80-90% NA NA HCC NA NA boxplot AC073046.25 NA chr2 73985132 73986343 + 1212 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC073046.25 NA 0.8 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CRC(up),PAAD(up) NA boxplot CTD-2319I12.4 NA chr17 60126535 60135644 - 9110 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2319I12.4 NA 0.188 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot UBBP4 ubiquitin B pseudogene 4 chr17 22202995 22205154 + 2160 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=UBBP4 NA 0.659 60-70% Testis 4.13951857 CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-310E22.4 NA chr10 95228243 95231144 - 2902 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-310E22.4 NA 0.459 20-30% Testis 2.469101579 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-165F24.3 NA chr9 452492 492248 - 39757 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-165F24.3 NA 0.035 80-90% NA NA Breast_cancer,CRC,Normal NA NA boxplot CTB-174D11.3 NA chr5 169012148 169013146 - 999 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTB-174D11.3 NA 0.024 50-60% NA NA Normal NA NA boxplot RP1-69M21.2 NA chr1 11609531 11613355 + 3825 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-69M21.2 NA 0.012 10-20% Testis 4.846292058 Breast_cancer,PAAD NA NA boxplot CTC-344H19.6 NA chr19 46111079 46113863 - 2785 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-344H19.6 NA 0.012 90-100% Testis 3.624463224 CRC NA NA boxplot CTD-2616J11.10 NA chr19 51361712 51365544 - 3833 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2616J11.10 NA 0.035 60-70% NA NA CRC,Normal,PAAD NA NA boxplot ZNF705E zinc finger protein 705E chr11 71814045 71821548 - 7504 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ZNF705E NA 0.153 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-46O21.2 NA chr10 74506081 74530553 - 24473 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-46O21.2 NA 0.012 60-70% Testis 4.906892038 Breast_cancer,Normal NA NA boxplot GAPDHP62 glyceraldehyde 3 phosphate dehydrogenase pseudogene 62 chr8 100550724 100551713 - 990 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GAPDHP62 NA 0.235 60-70% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot PGK1P2 phosphoglycerate kinase 1, pseudogene 2 chr19 12559571 12561105 + 1535 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PGK1P2 NA 0.071 90-100% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot RP4-646N3.1 NA chrX 38770331 38799658 + 29328 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-646N3.1 NA 0.047 0-10% NA NA Breast_cancer,HCC,Normal NA NA boxplot RP11-84A14.6 NA chr1 9951231 9960832 - 9602 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-84A14.6 NA 0.024 70-80% NA NA CRC,HCC NA NA boxplot RP11-302L19.1 NA chr6 170162517 170163027 + 511 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-302L19.1 NA 0.012 50-60% Testis 4.879064994 Normal NA NA boxplot RP11-68I3.4 NA chr17 29569580 29570519 + 940 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-68I3.4 NA 0.059 70-80% NA NA Breast_cancer,CRC,Normal NA NA boxplot CTC-343N3.1 NA chr11 2989863 2991344 + 1482 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-343N3.1 NA 0.106 70-80% NA NA CRC,HCC,Normal NA NA boxplot RP11-841O20.2 NA chr14 52640839 52641566 + 728 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-841O20.2 NA 0.153 50-60% NA NA CRC,HCC,Normal NA NA boxplot RP11-1094M14.8 NA chr17 35498218 35499175 + 958 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1094M14.8 NA 0.188 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CTD-2619J13.13 NA chr19 58400221 58400679 + 459 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2619J13.13 NA 0.012 90-100% Skin 2.677490249 Breast_cancer NA NA boxplot LINC01492 long intergenic non-protein coding RNA 1492 chr9 103140523 103325034 - 184512 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01492 NA 0.012 0-10% NA NA Breast_cancer,HCC NA NA boxplot RP11-1055B8.2 NA chr17 81362272 81374214 + 11943 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1055B8.2 NA 0.012 70-80% NA NA HCC NA NA boxplot RP11-404E16.1 NA chr1 151612038 151613363 - 1326 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-404E16.1 NA 0.059 70-80% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot AC099344.2 NA chr2 11357515 11365636 - 8122 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC099344.2 NA 0.024 80-90% NA NA Breast_cancer,CRC,HCC NA NA boxplot CNOT6LP1 CCR4-NOT transcription complex subunit 6-like pseudogene 1 chr15 56005715 56007176 - 1462 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CNOT6LP1 NA 1 0-10% NA NA CHD,CRC,HCC,Normal,PAAD CHD(down),CRC(down),PAAD(down) NA boxplot AC092646.1 NA chr2 123695302 123697396 + 2095 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC092646.1 NA 0.012 80-90% NA NA Breast_cancer,CRC,PAAD NA NA boxplot RP11-24F11.2 NA chr3 46364955 46407059 - 42105 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-24F11.2 NA 0.541 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-798K23.5 NA chr5 179527224 179527513 - 290 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-798K23.5 NA 0.635 10-20% NA NA CRC,HCC,Normal,PAAD CHD(down),HCC(down) NA boxplot RP11-377D9.3 NA chr12 13000451 13040679 + 40229 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-377D9.3 NA 0.153 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot TAS2R18 NA chr12 11158785 11159694 - 910 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TAS2R18 exo_circ_034071 0.106 50-60% NA NA CRC,Normal,PAAD NA NA boxplot HOXA10-AS HOXA10 antisense RNA chr7 27168619 27171915 + 3297 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HOXA10-AS NA 0.165 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot LINC01021 long intergenic non-protein coding RNA 1021 chr5 27472292 27496401 + 24110 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01021 NA 0.047 0-10% NA NA PAAD PAAD(up) NA boxplot PRICKLE2-AS3 PRICKLE2 antisense RNA 3 chr3 64187544 64200965 + 13422 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PRICKLE2-AS3 NA 0.071 50-60% NA NA HCC,Normal,PAAD NA NA boxplot KCTD9P4 potassium channel tetramerization domain containing 9 pseudogene 4 chr11 112180773 112183191 + 2419 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KCTD9P4 NA 0.612 70-80% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot AC007790.4 NA chr7 133732493 133733595 - 1103 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC007790.4 NA 0.012 90-100% NA NA Breast_cancer,CRC,Normal NA NA boxplot EEF1A1P3 eukaryotic translation elongation factor 1 alpha 1 pseudogene 3 chr13 28214513 28215897 + 1385 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=EEF1A1P3 NA 0.224 30-40% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP4-814D15.2 NA chr7 157192368 157192832 + 465 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-814D15.2 NA 0.165 20-30% Testis 1.625300057 CRC,Normal,PAAD NA NA boxplot COL6A4P2 collagen, type VI, alpha 4 pseudogene 2 chr3 130212823 130273806 + 60984 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=COL6A4P2 NA 0.188 60-70% Ovary 1.099893328 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC012314.20 NA chr19 54199454 54199971 - 518 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC012314.20 NA 0.012 90-100% Testis 4.075633088 Normal NA NA boxplot RP11-758N13.3 NA chr15 32836983 32837326 - 344 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-758N13.3 NA 0.035 70-80% NA NA CRC,PAAD NA NA boxplot CTB-50E14.4 NA chr19 42424384 42425071 - 688 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTB-50E14.4 NA 0.012 70-80% NA NA HCC NA NA boxplot SNHG9 small nucleolar RNA host gene 9 chr16 1964959 1965509 + 551 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SNHG9 NA 0.941 0-10% NA NA CHD,CRC,HCC,Normal,PAAD CHD(down),CRC(down),PAAD(down) NA boxplot CH507-254M2.2 NA chr21 7430659 7469007 + 38349 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CH507-254M2.2 NA 0.506 10-20% NA NA CRC,HCC,PAAD PAAD(up) NA boxplot RP11-465B22.8 NA chr1 1169357 1170343 + 987 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-465B22.8 NA 0.024 90-100% NA NA Breast_cancer,CRC NA NA boxplot OFD1P17 OFD1 pseudogene 17 chr5 37209364 37212381 + 3018 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=OFD1P17 NA 0.4 70-80% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-894P9.2 NA chr14 103553421 103561877 + 8457 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-894P9.2 NA 0.012 80-90% NA NA Breast_cancer,Normal NA NA boxplot RP11-281O15.7 NA chr5 179082680 179083194 - 515 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-281O15.7 NA 0.188 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-365F18.6 NA chr7 139198557 139199142 - 586 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-365F18.6 NA 0.012 70-80% NA NA PAAD NA NA boxplot RP3-462D8.2 NA chr22 25279529 25282674 - 3146 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-462D8.2 NA 0.024 30-40% NA NA Breast_cancer,PAAD NA NA boxplot MSX2P1 msh homeobox 2 pseudogene 1 chr17 58157028 58157800 + 773 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MSX2P1 NA 0.847 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-462H3.2 NA chr20 30545601 30551470 + 5870 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-462H3.2 NA 0.012 60-70% NA NA CRC NA NA boxplot OVAAL ovarian adenocarcinoma amplified long non-coding RNA chr1 180558976 180566518 + 7543 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=OVAAL exo_circ_013793 0.035 30-40% NA NA CRC,Normal NA NA boxplot PDCL3P1 phosducin-like 3 pseudogene 1 chr8 60387262 60387995 + 734 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PDCL3P1 NA 0.012 10-20% Testis 4.906892038 PAAD NA NA boxplot RP11-543H23.2 NA chr18 69704978 69724975 - 19998 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-543H23.2 exo_circ_005579 0.012 80-90% Testis 4.906892038 CRC NA NA boxplot RP11-218C14.8 NA chr20 23631826 23632316 - 491 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-218C14.8 NA 0.012 90-100% NA NA Breast_cancer,CRC NA NA boxplot CTD-2583P5.3 NA chr16 12759282 12761162 + 1881 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2583P5.3 NA 0.082 20-30% Testis 2.937291285 Breast_cancer,CRC,HCC,Normal NA NA boxplot RP11-146I2.1 NA chr6 14661829 15090003 - 428175 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-146I2.1 NA 0.188 30-40% Testis 3.020097563 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-487I5.4 NA chr10 75125217 75125862 + 646 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-487I5.4 NA 0.071 80-90% NA NA CRC,Normal NA NA boxplot RP11-278I4.2 NA chr8 119062942 119068782 - 5841 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-278I4.2 NA 0.024 40-50% Artery 3.346545497 CRC,Normal,PAAD NA NA boxplot RP11-110H1.9 NA chr18 49431744 49447420 - 15677 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-110H1.9 NA 0.047 70-80% Testis 4.906892038 CRC,HCC,Normal NA NA boxplot RP11-534C12.1 NA chr3 194637505 194637664 - 160 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-534C12.1 NA 0.071 60-70% NA NA CRC,Normal NA NA boxplot RP11-848P1.2 NA chr17 30971652 30973312 + 1661 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-848P1.2 NA 0.271 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot HMGB1P46 high mobility group box 1 pseudogene 46 chr8 107173200 107173809 - 610 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HMGB1P46 exo_circ_004357,exo_circ_033636,exo_circ_010440,exo_circ_044699,exo_circ_010441,exo_circ_044700,exo_circ_018317,exo_circ_022270,exo_circ_027995,exo_circ_050129,exo_circ_031873,exo_circ_016488,exo_circ_042436,exo_circ_041601,exo_circ_035258,exo_circ_015195,exo_circ_010442,exo_circ_017951,exo_circ_055545,exo_circ_055546 0.012 0-10% Testis 4.906892038 PAAD NA NA boxplot RP11-478C6.1 NA chr4 336258 336786 - 529 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-478C6.1 NA 0.035 60-70% NA NA CRC,HCC,Normal NA NA boxplot RP11-432M8.13 NA chr5 17634460 17635053 + 594 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-432M8.13 NA 0.012 30-40% NA NA PAAD NA NA boxplot RP11-11N7.4 NA chr1 244864738 244865272 + 535 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-11N7.4 NA 0.059 60-70% Testis 2.297297637 CRC,HCC,Normal,PAAD NA NA boxplot RP11-367F23.1 NA chr9 90957260 90965393 - 8134 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-367F23.1 NA 0.024 40-50% NA NA Breast_cancer,CRC,Normal NA NA boxplot LINC00393 long intergenic non-protein coding RNA 393 chr13 73413473 73648253 - 234781 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00393 NA 0.012 0-10% Skin 4.000110008 HCC NA NA boxplot RP11-728K20.3 NA chr7 149890739 149891416 + 678 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-728K20.3 NA 0.071 90-100% NA NA HCC,Normal,PAAD NA NA boxplot RP11-428O18.6 NA chr13 27178263 27251288 - 73026 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-428O18.6 NA 0.471 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot RPL17P22 ribosomal protein L17 pseudogene 22 chr5 56136979 56137531 + 553 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL17P22 NA 0.188 60-70% Ovary 4.906892038 CRC,HCC,Normal,PAAD NA NA boxplot RP11-363E7.4 NA chr9 19453209 19455173 + 1965 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-363E7.4 NA 0.765 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(up) NA boxplot RP11-205M5.3 NA chr8 37858949 37861333 + 2385 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-205M5.3 NA 0.376 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot LA16c-380H5.1 NA chr16 2988961 2994509 + 5549 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LA16c-380H5.1 NA 0.024 90-100% NA NA Breast_cancer,Normal NA NA boxplot CH17-472G23.4 NA chr1 120489860 120701289 - 211430 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CH17-472G23.4 NA 0.929 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(up),PAAD(up) NA boxplot RP11-466A19.8 NA chr17 32509954 32523424 - 13471 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-466A19.8 NA 0.118 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RPS23P8 ribosomal protein S23 pseudogene 8 chrX 70962964 70963293 + 330 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPS23P8 NA 1 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CRC(down),PAAD(down) NA boxplot RP11-160H22.3 NA chr1 174022509 174022985 + 477 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-160H22.3 NA 0.047 60-70% Testis 4.519517796 CRC,Normal NA NA boxplot RP11-285A1.1 NA chr15 78141243 78143173 + 1931 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-285A1.1 NA 0.024 60-70% NA NA Breast_cancer,Normal NA NA boxplot RP11-93O14.2 NA chr16 46660696 46661591 - 896 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-93O14.2 NA 0.012 90-100% NA NA CRC,Normal NA NA boxplot CTA-228A9.3 NA chr22 38090127 38091559 + 1433 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTA-228A9.3 NA 0.024 50-60% NA NA Normal NA NA boxplot GNG12-AS1 GNG12 antisense RNA 1 chr1 67832303 68202987 + 370685 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GNG12-AS1 exo_circ_035136,exo_circ_009601 0.165 10-20% NA NA Breast_cancer,CHD,HCC,Normal,PAAD NA NA boxplot HOXC13-AS HOXC13 antisense RNA chr12 53935328 53939643 - 4316 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HOXC13-AS NA 0.035 10-20% NA NA Breast_cancer,PAAD NA NA boxplot RP5-890E16.2 NA chr17 48045141 48048073 - 2933 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-890E16.2 NA 0.094 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot PAN3-AS1 PAN3 antisense RNA 1 chr13 28136843 28138193 - 1351 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PAN3-AS1 NA 0.647 20-30% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot ARHGAP31-AS1 ARHGAP31 antisense RNA 1 chr3 119314293 119322760 - 8468 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ARHGAP31-AS1 NA 0.353 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP5-1042I8.7 NA chr1 119909255 119910613 - 1359 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-1042I8.7 NA 0.318 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot METTL21AP1 methyltransferase like 21A pseudogene 1 chr21 39235386 39236020 - 635 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=METTL21AP1 NA 0.035 60-70% NA NA CRC NA NA boxplot LINC01176 long intergenic non-protein coding RNA 1176 chr7 30390885 30412375 + 21491 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01176 exo_circ_042412 0.765 10-20% NA NA CHD,CRC,HCC,Normal,PAAD CHD(up),PAAD(up) NA boxplot GUCY2EP guanylate cyclase 2E, pseudogene chr11 76694041 76719801 - 25761 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GUCY2EP NA 0.059 10-20% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot CTD-2201G3.1 NA chr5 113323028 113437174 + 114147 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2201G3.1 NA 0.012 90-100% Testis 3.09672014 Breast_cancer,CRC NA NA boxplot RP11-1023P17.2 NA chr8 52294455 52301942 + 7488 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1023P17.2 NA 0.153 30-40% Spleen 4.906892038 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP4-802A10.1 NA chr1 61124733 61125202 + 470 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-802A10.1 exo_circ_003231,exo_circ_009593,exo_circ_047139,exo_circ_003233,exo_circ_027179,exo_circ_009594,exo_circ_008263 0.035 30-40% NA NA CRC,PAAD NA NA boxplot RP11-428C19.4 NA chr11 19196775 19281426 + 84652 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-428C19.4 NA 0.012 0-10% NA NA Breast_cancer,CRC,HCC NA NA boxplot RP11-701H24.3 NA chr15 25027736 25032047 - 4312 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-701H24.3 NA 0.059 10-20% NA NA CRC,HCC,Normal,PAAD NA NA boxplot GOLGA2P11 golgin A2 pseudogene 11 chr15 62253730 62270680 - 16951 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GOLGA2P11 NA 0.012 50-60% NA NA Breast_cancer NA NA boxplot RP11-44M6.3 NA chr7 100570131 100571136 + 1006 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-44M6.3 NA 0.012 50-60% NA NA Breast_cancer NA NA boxplot AC004471.9 NA chr22 19121529 19124503 + 2975 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC004471.9 NA 0.071 80-90% NA NA HCC,Normal NA NA boxplot RP11-705C15.2 NA chr12 9617284 9658412 + 41129 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-705C15.2 exo_circ_056727,exo_circ_051146,exo_circ_032101,exo_circ_012615,exo_circ_005038 0.929 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),HCC(down) NA boxplot RP11-667K14.8 NA chr17 2127430 2127904 - 475 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-667K14.8 NA 0.165 50-60% NA NA Breast_cancer,CRC,Normal,PAAD NA NA boxplot CTD-3247H4.2 NA chr15 48528980 48529728 - 749 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-3247H4.2 NA 0.012 50-60% NA NA NA NA NA boxplot RP11-203J24.8 NA chr9 127934503 127940952 + 6450 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-203J24.8 NA 0.094 20-30% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot RPL9P7 ribosomal protein L9 pseudogene 7 chrX 23836742 23837321 - 580 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL9P7 NA 1 0-10% NA NA CHD,CRC,HCC,Normal,PAAD CHD(up),CRC(up),HCC(up),PAAD(up) NA boxplot RP11-386I14.2 NA chr1 78043383 78044148 - 766 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-386I14.2 NA 0.047 70-80% NA NA HCC NA NA boxplot RP11-576C12.1 NA chr9 112581779 112582590 - 812 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-576C12.1 NA 0.012 0-10% NA NA Normal NA NA boxplot CTC-756D1.3 NA chr8 23493009 23494198 - 1190 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-756D1.3 NA 0.376 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CRTC3-AS1 CRTC3 antisense RNA 1 chr15 90620007 90717141 - 97135 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CRTC3-AS1 exo_circ_005339 0.835 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down),HCC(down),PAAD(down) NA boxplot AC012454.4 NA chr2 85686053 85687047 - 995 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC012454.4 NA 0.012 90-100% NA NA Breast_cancer,CRC NA NA boxplot RP11-6L6.7 NA chr4 146241806 146243669 + 1864 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-6L6.7 NA 0.012 30-40% Testis 4.906892038 Breast_cancer,Normal NA NA boxplot ASH2LP1 ash2 (absent, small, or homeotic)-like (Drosophila) pseudogene 1 chr22 22420326 22421310 + 985 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ASH2LP1 NA 0.047 0-10% NA NA Breast_cancer,HCC,Normal NA NA boxplot AC005076.5 NA chr7 87151423 87152420 - 998 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC005076.5 NA 0.706 10-20% Testis 1.856589748 CRC,HCC,Normal,PAAD CHD(down),PAAD(down) NA boxplot RP11-411G9.2 NA chr13 68878380 68893573 + 15194 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-411G9.2 NA 0.012 90-100% NA NA Normal NA NA boxplot RP11-638I2.6 NA chr14 100291117 100294656 + 3540 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-638I2.6 NA 0.106 80-90% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RPL21P122 ribosomal protein L21 pseudogene 122 chr17 11998353 12021508 - 23156 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL21P122 NA 0.059 50-60% Testis 3.848146025 CRC,HCC,Normal,PAAD NA NA boxplot RP11-182L21.6 NA chr10 79825902 79827602 + 1701 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-182L21.6 NA 0.894 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot CTD-3001H11.2 NA chr19 47607873 47608454 - 582 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-3001H11.2 NA 0.118 70-80% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CTC-204F22.1 NA chr19 44246478 44248374 - 1897 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-204F22.1 NA 0.071 60-70% NA NA CRC,Normal,PAAD NA NA boxplot MUPP major urinary protein, pseudogene chr9 112959134 112962261 - 3128 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MUPP NA 0.012 90-100% NA NA Breast_cancer,PAAD NA NA boxplot HNCAT21 head and neck cancer-associated transcript 21 chr5 118282575 118284782 + 2208 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HNCAT21 NA 0.012 90-100% NA NA HCC NA NA boxplot AC100830.4 NA chr15 64695041 64695594 + 554 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC100830.4 NA 0.071 80-90% NA NA CRC,HCC NA NA boxplot ACTG1P10 actin gamma 1 pseudogene 10 chrX 53142832 53143913 - 1082 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ACTG1P10 NA 0.141 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CTD-2187J20.1 NA chr5 67268022 67270182 + 2161 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2187J20.1 exo_circ_004019 0.012 10-20% NA NA Breast_cancer,Normal NA NA boxplot MIR29A microRNA 29a chr7 130876747 130913310 - 36564 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MIR29A NA 0.471 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CRC(up),PAAD(up) NA boxplot AC010091.1 NA chr7 81489204 81691406 - 202203 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC010091.1 NA 0.012 10-20% Testis 2.948892923 Breast_cancer NA NA boxplot RP11-527J8.1 NA chr2 99405218 99405843 + 626 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-527J8.1 exo_circ_053977 0.165 30-40% NA NA CRC,HCC,Normal NA NA boxplot CTD-3138B18.5 NA chr19 58257270 58278808 - 21539 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-3138B18.5 NA 0.929 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down) NA boxplot RP11-334E6.10 NA chr11 119336249 119337309 - 1061 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-334E6.10 NA 0.118 60-70% NA NA HCC,Normal NA NA boxplot AC097523.1 NA chr2 138278574 138279210 + 637 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC097523.1 NA 0.247 80-90% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-62H7.2 NA chr8 8961200 8979025 + 17826 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-62H7.2 exo_circ_047567 0.2 70-80% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot PPIAP29 peptidylprolyl isomerase A (cyclophilin A) pseudogene 29 chr6 24976419 24976982 + 564 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PPIAP29 NA 1 0-10% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-777F6.3 NA chr11 87323709 87324359 - 651 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-777F6.3 NA 0.035 10-20% NA NA Normal NA NA boxplot MIR5689HG MIR5689 host gene chr6 10434316 10456781 + 22466 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MIR5689HG NA 0.012 90-100% NA NA Normal,PAAD NA NA boxplot RSF1-IT1 RSF1 intronic transcript 1 chr11 77738680 77739568 - 889 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RSF1-IT1 NA 0.059 60-70% NA NA CRC,Normal,PAAD NA NA boxplot RP11-347C12.12 NA chr16 30336400 30343336 + 6937 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-347C12.12 NA 0.059 70-80% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot RP4-784A16.5 NA chr1 53328233 53336509 + 8277 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-784A16.5 NA 0.188 30-40% Testis 2.607257824 CRC,HCC,Normal,PAAD NA NA boxplot RP11-173A8.2 NA chr14 74658049 74658590 + 542 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-173A8.2 NA 0.012 70-80% NA NA Breast_cancer,Normal NA NA boxplot USP2-AS1 USP2 antisense RNA 1 (head to head) chr11 119381778 119526664 + 144887 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=USP2-AS1 NA 0.035 0-10% Testis 2.262744764 Breast_cancer,HCC,PAAD NA NA boxplot SLC9A3P3 solute carrier family 9, subfamily A (NHE3, cation proton antiporter 3), member 3 pseudogene 3 chr10 50025135 50027363 - 2229 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SLC9A3P3 NA 0.012 80-90% Adrenal Gland 3.401097102 Breast_cancer NA NA boxplot RP11-324E6.6 NA chr12 122687125 122715979 + 28855 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-324E6.6 NA 0.153 50-60% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot RP5-1063M23.2 NA chr12 3318718 3325343 + 6626 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-1063M23.2 NA 0.012 90-100% NA NA Breast_cancer NA NA boxplot RP11-444A22.1 NA chr2 59218680 60100200 - 881521 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-444A22.1 NA 0.118 60-70% Testis 4.906892038 CRC,HCC,Normal,PAAD NA NA boxplot RP11-598O12.1 NA chr4 175962061 175962485 + 425 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-598O12.1 NA 0.012 10-20% NA NA Breast_cancer,Normal NA NA boxplot CTAGE11P CTAGE family member 11, pseudogene chr13 75237944 75240296 - 2353 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTAGE11P NA 0.024 90-100% Testis 4.880808001 CRC NA NA boxplot KRT17P2 keratin 17 pseudogene 2 chr17 18426861 18431848 + 4988 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KRT17P2 NA 0.106 50-60% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot CTC-559E9.1 NA chr19 19757366 19776423 - 19058 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-559E9.1 NA 0.471 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-974F13.5 NA chr5 69653248 69654334 + 1087 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-974F13.5 NA 0.024 80-90% Testis 4.906892038 CRC,PAAD NA NA boxplot KB-1460A1.3 NA chr8 101139665 101140929 + 1265 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KB-1460A1.3 NA 0.318 30-40% Testis 3.698526577 CRC,HCC,Normal,PAAD NA NA boxplot RP11-545D22.1 NA chr11 36510361 36510537 + 177 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-545D22.1 NA 0.094 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot SRGAP2D SLIT-ROBO Rho GTPase activating protein 2D (pseudogene) chr1 143975087 144068350 + 93264 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SRGAP2D NA 0.988 0-10% NA NA CHD,CRC,HCC,Normal,PAAD CHD(up),CRC(up),HCC(up),PAAD(up) NA boxplot RP11-629N8.5 NA chr12 64696191 64696550 - 360 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-629N8.5 NA 0.365 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot KRT43P keratin 43 pseudogene chr17 41448183 41454055 - 5873 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KRT43P NA 0.012 90-100% Skin 4.407412735 Breast_cancer NA NA boxplot RP11-356I2.4 NA chr6 137823673 137868233 - 44561 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-356I2.4 NA 0.647 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),HCC(down) NA boxplot CTB-58E17.5 NA chr17 38749360 38751457 + 2098 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTB-58E17.5 NA 0.082 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-680F8.1 NA chr15 29674990 29680957 + 5968 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-680F8.1 NA 0.106 10-20% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot CTD-2224J9.4 NA chr19 53495887 53496037 + 151 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2224J9.4 NA 0.129 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot PAICSP4 phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoimidazole succinocarboxamide synthetase pseudogene 4 chr8 4787332 4788584 + 1253 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PAICSP4 NA 0.529 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot U91319.1 NA chr16 13246316 13562918 + 316603 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=U91319.1 NA 0.012 90-100% Liver 2.688365878 HCC NA NA boxplot GOLGA6L5P golgin A6 family-like 5, pseudogene chr15 84507885 84516814 - 8930 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GOLGA6L5P NA 0.988 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CRC(up),HCC(up),PAAD(up) NA boxplot AC017101.10 NA chr2 186641339 186695287 - 53949 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC017101.10 NA 0.024 80-90% Pituitary 3.588578738 HCC,Normal NA NA boxplot RP5-837J1.4 NA chr17 35073831 35074374 - 544 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-837J1.4 NA 0.035 70-80% NA NA CRC,Normal NA NA boxplot RP11-413E1.4 NA chr1 89629725 89676386 + 46662 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-413E1.4 exo_circ_009616,exo_circ_030879,exo_circ_036815 0.165 40-50% Testis 4.906892038 CRC,HCC,Normal NA NA boxplot RP11-498C9.3 NA chr17 81867721 81868552 + 832 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-498C9.3 NA 0.694 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot KCNQ1-AS1 KCNQ1 antisense RNA 1 chr11 2840135 2861568 - 21434 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KCNQ1-AS1 NA 0.012 80-90% Testis 1.548640117 Breast_cancer,Normal NA NA boxplot SFR1P1 SFR1 pseudogene 1 chrX 120202061 120202748 - 688 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SFR1P1 NA 0.059 30-40% NA NA CRC,Normal,PAAD NA NA boxplot RP11-452H21.4 NA chr11 78423982 78429836 - 5855 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-452H21.4 exo_circ_056416,exo_circ_056417 0.271 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot MAGI2-AS3 MAGI2 antisense RNA 3 chr7 79452877 79471208 + 18332 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MAGI2-AS3 NA 1 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down) NA boxplot PLCE1-AS2 PLCE1 antisense RNA 2 chr10 94081950 94108814 - 26865 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PLCE1-AS2 NA 0.012 90-100% NA NA NA NA NA boxplot VPS35P1 VPS35 retromer complex component pseudogene 1 chr16 35090501 35104834 + 14334 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=VPS35P1 NA 0.047 90-100% NA NA CRC,HCC,Normal,PAAD NA NA boxplot AC108676.1 NA chr3 194496317 194501503 - 5187 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC108676.1 NA 0.012 90-100% NA NA Breast_cancer,HCC NA NA boxplot RP11-875O11.3 NA chr8 23071377 23074488 - 3112 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-875O11.3 NA 0.294 40-50% Whole Blood 2.602464298 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-553L6.3 NA chr3 114231398 114233021 - 1624 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-553L6.3 NA 0.012 90-100% NA NA Breast_cancer,CRC NA NA boxplot CTD-2293H3.1 NA chr19 37091341 37092564 + 1224 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2293H3.1 NA 0.071 50-60% NA NA CRC,HCC,Normal NA NA boxplot PHBP5 prohibitin pseudogene 5 chr7 73187969 73188736 - 768 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PHBP5 NA 0.024 30-40% NA NA Normal NA NA boxplot CASC2 cancer susceptibility candidate 2 (non-protein coding) chr10 118046279 118210153 + 163875 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CASC2 NA 0.459 20-30% NA NA CRC,HCC,Normal,PAAD NA Yes boxplot NAP1L1P1 nucleosome assembly protein 1-like 1 pseudogene 1 chr11 126067539 126068601 + 1063 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NAP1L1P1 NA 0.871 40-50% Testis 1.380886478 CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-927P21.6 NA chr17 64936485 64940229 - 3745 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-927P21.6 NA 0.035 10-20% Testis 3.837768816 Normal,PAAD NA NA boxplot CTD-2036P10.3 NA chr15 42739118 42743202 + 4085 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2036P10.3 NA 0.412 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-1053O12.1 NA chr14 41742639 41742963 + 325 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1053O12.1 NA 0.012 20-30% NA NA PAAD NA NA boxplot RP11-685G9.2 NA chr15 76339609 76342063 - 2455 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-685G9.2 NA 0.012 60-70% NA NA Breast_cancer,Normal NA NA boxplot THAP12P3 NA chr10 52411135 52413492 + 2358 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=THAP12P3 exo_circ_045134 0.047 90-100% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot MTCYBP32 MT-CYB pseudogene 32 chrX 102806741 102807824 + 1084 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MTCYBP32 NA 0.047 70-80% NA NA CRC NA NA boxplot HOXA11-AS HOXA11 antisense RNA chr7 27184518 27189293 + 4776 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HOXA11-AS NA 0.059 0-10% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot AC093673.5 NA chr7 143379692 143380495 - 804 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC093673.5 NA 0.918 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-245P10.6 NA chr1 228384114 228385016 - 903 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-245P10.6 NA 0.024 80-90% NA NA Breast_cancer,CRC,Normal NA NA boxplot CTD-3092A11.1 NA chr15 30470779 30507623 + 36845 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-3092A11.1 NA 0.929 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down) NA boxplot CTD-2210A23.1 NA chr8 48294026 48294694 - 669 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2210A23.1 NA 0.012 90-100% NA NA CRC NA NA boxplot RP11-490K7.4 NA chr1 31263245 31263681 - 437 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-490K7.4 NA 0.106 50-60% NA NA CRC,Normal,PAAD NA NA boxplot TERF1P5 telomeric repeat binding factor (NIMA-interacting) 1 pseudogene 5 chr13 18680494 18681700 + 1207 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TERF1P5 NA 0.871 0-10% NA NA CHD,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot RP11-716O23.1 NA chr6 11417350 11481239 + 63890 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-716O23.1 NA 0.012 90-100% Testis 4.906892038 NA NA NA boxplot RP11-302K17.3 NA chr10 102085476 102085730 - 255 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-302K17.3 NA 0.094 10-20% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP5-956O18.2 NA chr1 230258694 230268483 - 9790 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-956O18.2 NA 0.094 30-40% Testis 2.113017038 CRC,HCC,Normal,PAAD NA NA boxplot RP11-20G13.3 NA chr15 99395179 99396593 - 1415 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-20G13.3 NA 0.012 90-100% NA NA NA NA NA boxplot RP13-580B18.4 NA chr7 56809214 56848800 - 39587 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP13-580B18.4 NA 0.071 20-30% NA NA Breast_cancer,HCC,PAAD NA NA boxplot RP11-146F11.1 NA chr16 30697707 30699058 - 1352 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-146F11.1 NA 0.682 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot SUDS3P1 SDS3 homolog, SIN3A corepressor complex component pseudogene 1 chr5 177971316 177972281 + 966 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SUDS3P1 NA 0.941 0-10% NA NA CHD,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot RP11-33O4.1 NA chr2 219069354 219069809 - 456 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-33O4.1 NA 0.247 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-159N11.4 NA chr11 113368478 113369117 + 640 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-159N11.4 NA 0.518 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-203H2.1 NA chr6 8329655 8342455 + 12801 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-203H2.1 NA 0.012 70-80% Testis 4.117776131 NA NA NA boxplot RPS26P6 ribosomal protein S26 pseudogene 6 chr8 100895771 100896118 + 348 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPS26P6 NA 1 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CRC(down),HCC(up) NA boxplot RP11-265P11.1 NA chrX 39226103 39299786 - 73684 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-265P11.1 NA 0.235 30-40% Spleen 4.146902517 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-276H7.2 NA chr1 16155211 16157329 + 2119 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-276H7.2 NA 0.047 70-80% NA NA Breast_cancer,HCC,Normal NA NA boxplot RP1-168P16.1 NA chr16 89420075 89422226 - 2152 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-168P16.1 NA 0.459 50-60% Testis 4.906892038 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot SIGLEC29P sialic acid binding Ig-like lectin 29, pseudogene chr19 51563797 51564910 - 1114 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SIGLEC29P NA 0.035 80-90% NA NA Breast_cancer,Normal NA NA boxplot RPL12P27 ribosomal protein L12 pseudogene 27 chr10 97309138 97309958 - 821 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL12P27 NA 0.235 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot LINC01093 long intergenic non-protein coding RNA 1093 chr4 184893871 184899454 - 5584 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01093 NA 0.082 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal NA NA boxplot RPS3AP2 ribosomal protein S3A pseudogene 2 chr16 1477830 1478583 + 754 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPS3AP2 NA 0.035 80-90% Testis 3.021712014 Breast_cancer,CRC NA NA boxplot RP11-728G15.1 NA chr12 120629611 120641591 - 11981 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-728G15.1 NA 0.024 10-20% NA NA Breast_cancer,PAAD NA NA boxplot CYP2D7 cytochrome P450 family 2 subfamily D member 7 (gene/pseudogene) chr22 42140203 42144577 - 4375 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CYP2D7 NA 0.129 70-80% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot SOD1P1 superoxide dismutase 1, soluble pseudogene 1 chr6 53196720 53197159 - 440 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SOD1P1 NA 0.012 90-100% NA NA Normal NA NA boxplot CTD-2553L13.4 NA chr19 34638122 34640689 - 2568 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2553L13.4 NA 0.024 20-30% Testis 2.301197395 Breast_cancer,CRC NA NA boxplot RP11-667F9.1 NA chr7 65525629 65554744 - 29116 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-667F9.1 NA 0.176 70-80% Testis 2.42847593 CRC,HCC,Normal,PAAD NA NA boxplot SNHG21 small nucleolar RNA host gene 21 chr15 82750564 82757206 + 6643 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SNHG21 NA 0.341 30-40% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-159D12.2 NA chr17 57989039 57994850 - 5812 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-159D12.2 NA 0.365 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD PAAD(up) NA boxplot RPS3AP43 ribosomal protein S3a pseudogene 43 chr12 8359054 8359834 - 781 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPS3AP43 NA 0.035 70-80% NA NA CRC,Normal NA NA boxplot COX5BP6 cytochrome c oxidase subunit Vb pseudogene 6 chr13 100623875 100624429 - 555 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=COX5BP6 NA 0.071 90-100% NA NA CRC,HCC,Normal,PAAD NA NA boxplot NXNP1 nucleoredoxin pseudogene 1 chr1 218881600 218882650 - 1051 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NXNP1 NA 0.035 90-100% NA NA Normal,PAAD NA NA boxplot RP11-304L19.11 NA chr16 2240487 2241818 + 1332 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-304L19.11 NA 0.035 50-60% NA NA Breast_cancer,CRC,Normal NA NA boxplot RPL9P15 ribosomal protein L9 pseudogene 15 chr3 154676588 154677119 - 532 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL9P15 NA 0.024 30-40% NA NA CRC,HCC NA NA boxplot TMSB4XP6 thymosin beta 4, X-linked pseudogene 6 chr20 50840615 50840749 - 135 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TMSB4XP6 NA 0.718 70-80% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-231I16.1 NA chr12 116977442 116987337 - 9896 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-231I16.1 NA 0.071 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-589M4.3 NA chr14 52792875 52820034 - 27160 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-589M4.3 NA 0.012 80-90% NA NA CRC NA NA boxplot CTD-2336O2.3 NA chr8 1758208 1760447 - 2240 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2336O2.3 NA 0.165 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot FER1L6-AS1 FER1L6 antisense RNA 1 chr8 123984138 124040782 - 56645 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FER1L6-AS1 NA 0.012 10-20% Testis 4.906892038 Normal NA NA boxplot RP11-390K5.3 NA chr11 47123104 47130801 - 7698 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-390K5.3 NA 0.035 50-60% NA NA CRC,PAAD NA NA boxplot LINC00921 long intergenic non-protein coding RNA 921 chr16 3263743 3267567 + 3825 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00921 NA 0.882 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down),CRC(down) NA boxplot RP3-395P12.2 NA chr1 173174300 173175503 - 1204 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-395P12.2 NA 0.271 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot NPM1P30 nucleophosmin 1 (nucleolar phosphoprotein B23, numatrin) pseudogene 30 chr10 21110682 21113388 + 2707 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NPM1P30 NA 0.012 70-80% Testis 3.908754509 Breast_cancer NA NA boxplot ZNF300P1 zinc finger protein 300 pseudogene 1 (functional) chr5 150930645 150946289 - 15645 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ZNF300P1 NA 0.329 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot LINC00926 long intergenic non-protein coding RNA 926 chr15 57300365 57307769 + 7405 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00926 exo_circ_020440,exo_circ_032198 1 0-10% Spleen 1.681605173 Breast_cancer,CHD,CRC,HCC,Normal,PAAD HCC(down),PAAD(down) NA boxplot RP11-1079K10.4 NA chr17 49404081 49405197 + 1117 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1079K10.4 NA 0.553 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot NF1P10 neurofibromin 1 pseudogene 10 chr14 18709478 18712643 - 3166 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NF1P10 NA 0.012 60-70% NA NA PAAD NA NA boxplot CH17-270A2.1 NA chr1 145961388 145964422 + 3035 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CH17-270A2.1 NA 0.047 40-50% NA NA CRC,HCC,Normal NA NA boxplot CEP170P1 centrosomal protein 170kDa pseudogene 1 chr4 118467590 118554100 + 86511 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CEP170P1 NA 1 0-10% Testis 3.413275647 CHD,CRC,HCC,Normal,PAAD CHD(down),CRC(up),HCC(up),PAAD(up) NA boxplot RP11-131L23.1 NA chr1 85276715 85448124 + 171410 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-131L23.1 exo_circ_043327,exo_circ_003262 0.494 30-40% Testis 1.437461806 CRC,HCC,Normal,PAAD NA NA boxplot RP11-501C14.5 NA chr17 48995266 48997492 - 2227 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-501C14.5 NA 0.012 90-100% Testis 4.906892038 Breast_cancer NA NA boxplot LDLRAD4-AS1 LDLRAD4 antisense RNA 1 chr18 13419421 13427480 - 8060 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LDLRAD4-AS1 NA 0.071 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal NA NA boxplot RP11-361M10.3 NA chr15 72605183 72612326 + 7144 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-361M10.3 exo_circ_005318 0.2 60-70% Testis 1.18672554 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CTC-359D24.3 NA chr19 12141806 12143322 - 1517 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-359D24.3 NA 0.776 10-20% NA NA CRC,HCC,Normal,PAAD PAAD(up) NA boxplot LINC00491 long intergenic non-protein coding RNA 491 chr5 102609156 102671559 - 62404 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00491 NA 0.047 10-20% Testis 3.684313077 Breast_cancer,Normal,PAAD NA NA boxplot RP11-334J6.6 NA chr9 131516558 131522229 - 5672 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-334J6.6 NA 0.082 60-70% NA NA CRC,HCC,Normal NA NA boxplot RPL18AP7 ribosomal protein L18a pseudogene 7 chr3 38526802 38527325 - 524 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL18AP7 NA 0.024 60-70% NA NA Normal NA NA boxplot RP11-158M2.3 NA chr15 85744109 85750281 - 6173 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-158M2.3 NA 0.376 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-398A8.5 NA chr3 72080564 72084641 - 4078 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-398A8.5 NA 0.094 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-17E3.1 NA chr18 69398726 69399249 - 524 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-17E3.1 NA 0.035 80-90% NA NA HCC,Normal NA NA boxplot RP11-352D3.2 NA chr20 4070152 4075165 - 5014 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-352D3.2 NA 0.012 90-100% NA NA CRC NA NA boxplot RP11-410L14.1 NA chr8 99003407 99003842 - 436 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-410L14.1 NA 0.047 10-20% NA NA Breast_cancer,Normal NA NA boxplot AF064858.7 NA chr21 38974429 38977774 - 3346 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AF064858.7 NA 0.012 80-90% NA NA Breast_cancer NA NA boxplot U47924.31 NA chr12 6943508 6944604 - 1097 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=U47924.31 NA 0.918 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),HCC(up),PAAD(up) NA boxplot RP4-635E18.6 NA chr1 11099675 11102100 + 2426 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-635E18.6 NA 0.094 70-80% Testis 1.177122194 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot SLC16A6P1 SLC16A6 pseudogene 1 chr17 64953683 64956546 + 2864 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SLC16A6P1 NA 0.365 40-50% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot CTD-2527I21.4 NA chr19 35138824 35151336 + 12513 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2527I21.4 NA 0.706 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RPL39P3 ribosomal protein L39 pseudogene 3 chr6 73373108 73373263 - 156 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL39P3 NA 1 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CRC(down) NA boxplot RP11-533E19.5 NA chr1 179953184 179954440 - 1257 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-533E19.5 NA 0.118 40-50% Testis 1.31154028 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-474P2.7 NA chr12 46404644 46407166 + 2523 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-474P2.7 exo_circ_045486 0.165 40-50% NA NA CRC,HCC,Normal NA NA boxplot SMURF2P1 NA chr17 30600796 30615980 + 15185 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SMURF2P1 NA 0.518 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot AC104843.3 NA chr7 152602213 152602892 - 680 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC104843.3 exo_circ_042403 0.059 80-90% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-87E22.2 NA chr8 22877972 22888022 + 10051 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-87E22.2 NA 0.012 70-80% NA NA Breast_cancer,CRC NA NA boxplot LINC00702 long intergenic non-protein coding RNA 702 chr10 4201141 4243912 - 42772 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00702 NA 0.212 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RASA4DP RAS p21 protein activator 4CD, pseudogene chr7 102681836 102690469 - 8634 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RASA4DP NA 0.953 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up),CRC(up),HCC(up),PAAD(up) NA boxplot TIMM8AP1 translocase of inner mitochondrial membrane 8 homolog A (yeast) pseudogene 1 chr2 162077357 162077651 - 295 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TIMM8AP1 NA 0.212 40-50% Prostate 1.614883008 CRC,HCC,Normal,PAAD NA NA boxplot RP4-550H1.7 NA chr20 36064243 36064563 - 321 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-550H1.7 NA 0.059 70-80% NA NA CRC,HCC,Normal NA NA boxplot CTC-490G23.6 NA chr19 42977463 43171515 + 194053 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-490G23.6 NA 0.012 40-50% NA NA Normal NA NA boxplot RP11-855A2.3 NA chr17 67950885 67951746 - 862 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-855A2.3 NA 0.012 30-40% NA NA CRC,Normal NA NA boxplot RP11-707M3.3 NA chr8 65714334 65714778 - 445 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-707M3.3 NA 0.247 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-53O19.3 NA chr5 44826076 44828592 + 2517 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-53O19.3 exo_circ_010185 0.859 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(down) NA boxplot RP11-305K5.1 NA chr3 156523740 156524247 - 508 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-305K5.1 NA 0.2 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot LINC01133 long intergenic non-protein coding RNA 1133 chr1 159961218 159984750 + 23533 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01133 NA 0.529 20-30% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-634H22.1 NA chr7 139359032 139359566 - 535 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-634H22.1 NA 0.071 50-60% Testis 1.284173182 Breast_cancer,CRC,HCC,Normal NA NA boxplot CTC-348L5.1 NA chr5 160613873 160639183 + 25311 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-348L5.1 NA 0.047 70-80% NA NA Breast_cancer,CRC,HCC,PAAD NA NA boxplot RPSAP13 ribosomal protein SA pseudogene 13 chr14 55004813 55005687 - 875 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPSAP13 NA 0.024 70-80% NA NA Breast_cancer,CRC NA NA boxplot AC092013.1 NA chr7 85636013 85636344 - 332 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC092013.1 NA 0.024 40-50% Brain 4.906892038 HCC NA NA boxplot RP11-691H4.4 NA chr18 13461020 13470823 - 9804 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-691H4.4 NA 0.012 90-100% Testis 4.516260488 Breast_cancer,Normal,PAAD NA NA boxplot LINC01297 long intergenic non-protein coding RNA 1297 chr22 15746630 15778297 + 31668 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01297 NA 0.024 50-60% NA NA Breast_cancer,CRC NA NA boxplot RP11-325F22.2 NA chr7 104941063 104962334 + 21272 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-325F22.2 NA 0.906 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),HCC(down) NA boxplot RP11-142C4.5 NA chr11 58995439 58999689 - 4251 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-142C4.5 NA 0.776 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-613D13.10 NA chr11 43855913 43856404 - 492 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-613D13.10 NA 0.071 40-50% NA NA HCC,Normal NA NA boxplot AC084809.2 NA chr17 32876759 32878637 + 1879 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC084809.2 NA 0.129 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-629B11.5 NA chr4 74156511 74158373 - 1863 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-629B11.5 exo_circ_016157 0.224 50-60% NA NA HCC,Normal,PAAD NA NA boxplot RP11-540A21.2 NA chr11 9754770 9759533 - 4764 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-540A21.2 NA 0.071 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-343H19.2 NA chr16 56682470 56687807 + 5338 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-343H19.2 NA 0.447 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-43A14.1 NA chr8 725188 725877 - 690 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-43A14.1 NA 0.118 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot HSPE1P25 heat shock protein family E (Hsp10) member 1 pseudogene 25 chr1 77853355 77853893 + 539 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HSPE1P25 NA 0.035 60-70% NA NA CRC,Normal NA NA boxplot LINC00239 long intergenic non-protein coding RNA 239 chr14 101730437 101732522 + 2086 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00239 NA 0.671 20-30% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-274J2.1 NA chr4 84244003 84245488 + 1486 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-274J2.1 NA 0.047 90-100% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot RP11-459J23.1 NA chr13 69311333 69322101 + 10769 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-459J23.1 NA 0.024 10-20% NA NA Normal NA NA boxplot RP4-669P10.20 NA chr22 42138060 42139726 + 1667 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-669P10.20 NA 0.059 70-80% NA NA CRC,Normal NA NA boxplot RP5-1065P14.2 NA chr1 229092815 229094905 - 2091 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-1065P14.2 NA 0.024 50-60% NA NA PAAD NA NA boxplot UBE2D3P1 ubiquitin conjugating enzyme E2D 3 pseudogene 1 chr20 5292388 5292831 - 444 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=UBE2D3P1 NA 0.988 0-10% NA NA CHD,CRC,HCC,Normal,PAAD CHD(up),HCC(up) NA boxplot RP3-342P20.2 NA chr1 39962680 39963404 + 725 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-342P20.2 NA 0.153 80-90% NA NA CRC,HCC,Normal,PAAD NA NA boxplot AC005082.12 NA chr7 23206013 23208045 + 2033 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC005082.12 NA 0.318 30-40% Testis 1.287209368 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC096579.15 NA chr2 88811186 88861563 - 50378 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC096579.15 NA 0.647 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-421E17.4 NA chr1 206333327 206333438 - 112 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-421E17.4 NA 0.365 70-80% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CTD-2021J15.1 NA chr3 98902424 99018562 + 116139 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2021J15.1 NA 0.024 90-100% NA NA PAAD NA NA boxplot LINC00869 long intergenic non-protein coding RNA 869 chr1 149606334 149679523 + 73190 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00869 NA 1 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot AKR1C5P aldo-keto reductase family 1, member C5, pseudogene chr10 5122087 5135226 - 13140 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AKR1C5P NA 0.318 40-50% Liver 4.020251851 CRC,HCC,Normal,PAAD NA NA boxplot RP11-81K2.1 NA chr17 49370740 49476988 + 106249 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-81K2.1 NA 0.071 70-80% NA NA CRC,Normal,PAAD NA NA boxplot RP11-506O24.2 NA chr1 164828436 164829952 + 1517 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-506O24.2 NA 0.012 20-30% NA NA NA NA NA boxplot CTD-2015H6.3 NA chr5 80482293 80488063 - 5771 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2015H6.3 NA 0.282 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot LA16c-385E7.1 NA chr16 1512979 1514675 + 1697 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LA16c-385E7.1 NA 0.012 10-20% NA NA Breast_cancer NA NA boxplot RP11-817G13.3 NA chr14 69154311 69154804 + 494 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-817G13.3 NA 0.012 70-80% NA NA HCC NA NA boxplot RP11-507K2.6 NA chr14 88589231 88592408 + 3178 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-507K2.6 NA 0.082 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot TM4SF19-AS1 TM4SF19 antisense RNA 1 chr3 196318330 196325570 + 7241 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TM4SF19-AS1 NA 0.129 50-60% Testis 1.138851873 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC006946.17 NA chr22 17080701 17081456 + 756 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC006946.17 NA 0.012 90-100% NA NA NA NA NA boxplot RP11-498C9.15 NA chr17 81878425 81881106 - 2682 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-498C9.15 NA 0.812 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),PAAD(up) NA boxplot RP11-83J16.3 NA chr15 34849137 34850395 - 1259 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-83J16.3 NA 0.141 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot GSTA6P glutathione S-transferase alpha 6, pseudogene chr6 52805613 52813460 - 7848 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GSTA6P NA 0.765 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot LINC00457 long intergenic non-protein coding RNA 457 chr13 34435450 34640685 - 205236 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00457 NA 0.012 60-70% NA NA HCC NA NA boxplot PGM5P2 phosphoglucomutase 5 pseudogene 2 chr9 41006999 41074617 - 67619 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PGM5P2 NA 0.588 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down),CRC(down) NA boxplot RP11-587D21.1 NA chr11 27581680 27582055 + 376 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-587D21.1 NA 0.929 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot RP1-63G5.7 NA chr22 37352190 37354839 - 2650 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-63G5.7 NA 0.024 30-40% Testis 4.878242581 PAAD NA NA boxplot LA16c-OS12.2 NA chr16 185748 186294 - 547 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LA16c-OS12.2 NA 0.071 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot LINC01353 long intergenic non-protein coding RNA 1353 chr1 203287152 203288801 + 1650 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01353 NA 0.282 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot AC106873.4 NA chr7 116965846 116967472 - 1627 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC106873.4 NA 0.012 90-100% Testis 4.906892038 HCC NA NA boxplot LINC00461 long intergenic non-protein coding RNA 461 chr5 88507546 88691041 - 183496 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00461 NA 0.024 70-80% Brain 2.909331263 Breast_cancer,PAAD NA NA boxplot RP11-760D2.10 NA chr7 56597379 56598342 + 964 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-760D2.10 NA 0.024 90-100% Testis 4.906892038 Normal NA NA boxplot RP11-75C10.7 NA chr17 77469068 77471045 + 1978 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-75C10.7 NA 0.118 70-80% NA NA Breast_cancer,CRC,Normal NA NA boxplot RP11-715G15.1 NA chr6 146594516 146598931 - 4416 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-715G15.1 NA 0.024 80-90% Testis 4.906892038 Normal NA NA boxplot RP11-36B15.1 NA chr4 37588087 37588875 - 789 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-36B15.1 NA 0.024 60-70% NA NA Breast_cancer,CRC,Normal NA NA boxplot RP11-480D4.7 NA chr5 8458842 8459183 + 342 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-480D4.7 NA 0.024 80-90% NA NA HCC NA NA boxplot KB-1639H6.2 NA chr8 103020187 103021428 - 1242 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KB-1639H6.2 NA 0.024 90-100% Testis 4.906892038 HCC,PAAD NA NA boxplot ZNF204P zinc finger protein 204, pseudogene chr6 27357825 27360221 - 2397 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ZNF204P NA 0.941 0-10% NA NA CHD,CRC,HCC,Normal,PAAD HCC(down) NA boxplot RP11-417L19.2 NA chr12 131857420 131864538 + 7119 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-417L19.2 NA 0.024 80-90% NA NA PAAD NA NA boxplot RP11-322E11.5 NA chr18 35443869 35467088 - 23220 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-322E11.5 NA 0.329 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot SSX6 synovial sarcoma, X breakpoint 6 (pseudogene) chrX 48107992 48120210 + 12219 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SSX6 NA 0.082 30-40% Testis 4.025796767 Breast_cancer,CRC,HCC,Normal NA NA boxplot FLJ45079 FLJ45079 protein chr17 77879027 77884087 - 5061 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FLJ45079 NA 0.059 40-50% NA NA Breast_cancer,CRC,Normal NA NA boxplot TRAM2-AS1 TRAM2 antisense RNA 1 (head to head) chr6 52577307 52583993 + 6687 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TRAM2-AS1 NA 0.894 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up) NA boxplot KRT18P16 keratin 18 pseudogene 16 chr5 123636110 123637403 + 1294 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KRT18P16 exo_circ_044162,exo_circ_054747 0.024 40-50% NA NA Breast_cancer,PAAD NA NA boxplot RP11-391L3.5 NA chr16 81476023 81476519 - 497 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-391L3.5 NA 0.012 20-30% NA NA Breast_cancer,HCC NA NA boxplot TP73-AS1 TP73 antisense RNA 1 chr1 3736943 3737103 + 161 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TP73-AS1 exo_circ_048328,exo_circ_046808 0.965 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-94C24.8 NA chr17 50537294 50538754 - 1461 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-94C24.8 NA 0.012 60-70% NA NA Breast_cancer,HCC NA NA boxplot RP11-413B19.2 NA chr12 41409467 41473510 - 64044 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-413B19.2 NA 0.059 50-60% Nerve 3.620029865 HCC,Normal,PAAD NA NA boxplot ABCC5-AS1 ABCC5 antisense RNA 1 chr3 184006338 184011419 + 5082 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ABCC5-AS1 NA 0.024 10-20% Pituitary 3.66924138 Breast_cancer,Normal,PAAD NA NA boxplot RP11-972P1.11 NA chr12 123519390 123519856 - 467 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-972P1.11 NA 0.071 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot LINC00888 long intergenic non-protein coding RNA 888 chr3 183447608 183456013 + 8406 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00888 NA 0.894 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-6O2.3 NA chr15 99139317 99145370 + 6054 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-6O2.3 NA 0.176 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RUVBL1-AS1 RUVBL1 antisense RNA 1 chr3 128075810 128079056 + 3247 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RUVBL1-AS1 exo_circ_031608 0.024 40-50% Testis 3.11881417 Breast_cancer,HCC,PAAD NA NA boxplot RP11-147C23.1 NA chr1 95937901 96022880 + 84980 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-147C23.1 NA 0.012 60-70% Testis 4.89254873 Normal,PAAD NA NA boxplot RP11-615J4.3 NA chr3 111466313 111497095 - 30783 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-615J4.3 NA 0.012 10-20% Testis 4.906892038 Breast_cancer,HCC NA NA boxplot RP11-367G18.1 NA chr6 113623535 113650074 - 26540 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-367G18.1 exo_circ_016298 0.2 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot KB-1507C5.3 NA chr8 102891876 102893608 + 1733 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KB-1507C5.3 NA 0.012 90-100% NA NA Breast_cancer,Normal NA NA boxplot RP11-231E6.1 NA chr3 112396647 112409134 - 12488 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-231E6.1 NA 0.012 50-60% Kidney 3.10682314 CRC NA NA boxplot AC012668.2 NA chr2 215533133 215713895 + 180763 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC012668.2 NA 0.024 80-90% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot CYP4F62P cytochrome P450 family 4 subfamily F member 62, pseudogene chr2 130429827 130441413 - 11587 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CYP4F62P NA 0.012 50-60% NA NA Breast_cancer,PAAD NA NA boxplot RP11-1007O24.3 NA chr15 72407778 72475168 - 67391 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1007O24.3 NA 0.553 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RWDD4P2 RWD domain containing 4 pseudogene 2 chr7 39854494 39855056 - 563 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RWDD4P2 NA 1 0-10% NA NA CHD,CRC,HCC,Normal,PAAD CRC(down) NA boxplot AC138035.1 NA chr5 181329241 181342213 + 12973 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC138035.1 NA 0.376 40-50% Testis 4.906892038 CRC,HCC,Normal,PAAD NA NA boxplot RP11-443G13.2 NA chr17 32280387 32280953 - 567 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-443G13.2 NA 0.012 90-100% Testis 4.668154842 Breast_cancer NA NA boxplot RP11-39M21.2 NA chr15 61211913 61214231 + 2319 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-39M21.2 NA 0.012 90-100% Testis 2.665087919 Breast_cancer,HCC NA NA boxplot RP11-46A10.6 NA chr1 180964511 180965909 + 1399 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-46A10.6 NA 0.012 90-100% NA NA CRC NA NA boxplot C1GALT1P2 ore 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 pseudogene 2 chr5 56192530 56193633 + 1104 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=C1GALT1P2 exo_circ_013643 0.294 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP4-671O14.5 NA chr22 44183031 44187739 - 4709 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-671O14.5 NA 0.388 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP4-756G23.5 NA chr22 41209122 41217627 - 8506 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-756G23.5 NA 0.812 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot AC003084.2 NA chr7 117998858 118004045 - 5188 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC003084.2 NA 0.012 70-80% NA NA Breast_cancer,CRC NA NA boxplot AC005498.3 NA chr19 56536156 56538575 - 2420 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC005498.3 NA 0.059 50-60% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot AMD1P2 adenosylmethionine decarboxylase 1 pseudogene 2 chrY 57015105 57016096 - 992 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AMD1P2 NA 0.012 90-100% NA NA Normal NA NA boxplot OR7E37P olfactory receptor family 7 subfamily E member 37 pseudogene chr13 41442770 41443666 + 897 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=OR7E37P NA 0.176 80-90% NA NA CRC,HCC,Normal,PAAD NA NA boxplot AC004906.3 NA chr7 2944035 2947091 + 3057 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC004906.3 NA 0.459 20-30% Testis 4.272974548 Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot RP11-295D4.3 NA chr16 4346694 4348648 - 1955 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-295D4.3 NA 0.141 40-50% NA NA Breast_cancer,CRC,Normal,PAAD NA NA boxplot HMGB1P41 high mobility group box 1 pseudogene 41 chr8 80812142 80812581 - 440 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HMGB1P41 NA 0.047 30-40% NA NA Normal,PAAD NA NA boxplot AC010761.13 NA chr17 28670054 28672804 - 2751 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC010761.13 NA 0.035 90-100% NA NA Breast_cancer,CRC,Normal NA NA boxplot SYNE1-AS1 SYNE1 antisense RNA 1 chr6 152380546 152381564 + 1019 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SYNE1-AS1 NA 0.212 20-30% NA NA HCC,Normal NA NA boxplot CH507-513H4.6 NA chr21 8210384 8211306 - 923 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CH507-513H4.6 NA 0.8 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CRC(up),HCC(up),PAAD(up) NA boxplot RP11-575L7.2 NA chr9 83829656 83837861 + 8206 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-575L7.2 NA 0.059 70-80% Testis 3.262835714 Breast_cancer,CRC,Normal,PAAD NA NA boxplot LLNLR-260G6.1 NA chr19 956485 958149 + 1665 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LLNLR-260G6.1 NA 0.024 30-40% NA NA Breast_cancer,CRC,PAAD NA NA boxplot RP11-123O10.3 NA chr12 67035508 67096406 - 60899 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-123O10.3 NA 0.024 10-20% Testis 4.678756918 HCC NA NA boxplot PAICSP1 phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoimidazole succinocarboxamide synthetase pseudogene 1 chr9 37878116 37879493 + 1378 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PAICSP1 NA 0.129 20-30% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot MORF4L1P1 mortality factor 4 like 1 pseudogene 1 chr1 220253570 220254536 + 967 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MORF4L1P1 NA 1 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-81H14.2 NA chr12 68332888 68451663 - 118776 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-81H14.2 exo_circ_051109,exo_circ_039907 0.918 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot CTB-131B5.2 NA chr5 140200163 140203187 + 3025 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTB-131B5.2 NA 0.035 30-40% NA NA CRC,Normal NA NA boxplot CTD-2135D7.2 NA chr16 13930677 13935635 - 4959 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2135D7.2 NA 0.235 10-20% Testis 1.450476022 CRC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot WFDC21P WAP four-disulfide core domain 21, pseudogene chr17 60083566 60091885 - 8320 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=WFDC21P NA 0.694 10-20% NA NA CHD,CRC,HCC,Normal,PAAD PAAD(up) NA boxplot RP4-673D20.3 NA chr20 1767957 1779995 - 12039 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-673D20.3 NA 0.318 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot PGM5P3-AS1 PGM5P3 antisense RNA 1 chr9 72674 88826 + 16153 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PGM5P3-AS1 exo_circ_050404,exo_circ_028127 0.059 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot AC006548.28 NA chr22 16950086 17034417 - 84332 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC006548.28 NA 0.106 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-46H11.12 NA chr12 132887842 132888583 + 742 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-46H11.12 NA 0.106 70-80% NA NA CRC,HCC,Normal NA NA boxplot VPS25P1 VPS25 pseudogene 1 chr1 117549415 117549922 + 508 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=VPS25P1 NA 0.012 60-70% Testis 4.906892038 PAAD NA NA boxplot RP11-98F14.11 NA chr13 113165002 113165183 - 182 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-98F14.11 NA 0.012 80-90% NA NA NA NA NA boxplot VN1R20P vomeronasal 1 receptor 20 pseudogene chr3 13926813 13927778 + 966 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=VN1R20P NA 0.047 60-70% Testis 1.265148573 CRC,HCC,Normal NA NA boxplot AC093585.6 NA chr2 241010045 241010744 - 700 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC093585.6 NA 0.024 60-70% NA NA Breast_cancer,Normal NA NA boxplot RP11-122C5.2 NA chr5 38763158 38764289 - 1132 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-122C5.2 NA 0.012 90-100% NA NA NA NA NA boxplot RP11-542K23.7 NA chr9 122403407 122448977 + 45571 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-542K23.7 NA 0.165 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP3-337H4.9 NA chr6 43519180 43519724 - 545 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-337H4.9 NA 0.153 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RPL14P3 ribosomal protein L14 pseudogene 3 chr4 140366240 140366861 - 622 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL14P3 NA 0.012 30-40% NA NA Normal,PAAD NA NA boxplot AC009473.1 NA chr7 7949853 7950709 - 857 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC009473.1 NA 0.388 20-30% Testis 2.848286383 CRC,HCC,Normal,PAAD NA NA boxplot PPP1R14BP3 protein phosphatase 1 regulatory inhibitor subunit 14B pseudogene 3 chr4 139114930 139115374 - 445 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PPP1R14BP3 NA 1 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down) NA boxplot PCBP3-OT1 PCBP3 overlapping transcript 1 chr21 45914296 45919483 + 5188 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PCBP3-OT1 NA 0.047 80-90% NA NA Breast_cancer,CRC,Normal NA NA boxplot CTD-3131K8.2 NA chr19 17488990 17511889 - 22900 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-3131K8.2 NA 0.506 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-819M15.1 NA chr11 106826392 106827890 - 1499 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-819M15.1 NA 0.682 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP1-140A9.1 NA chr1 1891471 1892658 + 1188 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-140A9.1 NA 0.106 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-356N1.2 NA chr1 108040263 108076020 + 35758 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-356N1.2 NA 0.647 10-20% NA NA CRC,HCC,Normal,PAAD CHD(down),PAAD(down) NA boxplot RP11-136H19.1 NA chr17 61130704 61135964 - 5261 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-136H19.1 NA 0.024 80-90% Lung 1.245417699 Breast_cancer,CRC,HCC NA NA boxplot RP5-968J1.1 NA chr20 1804016 1817606 - 13591 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-968J1.1 NA 0.141 40-50% Testis 2.902204886 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-24I21.1 NA chr4 149154295 149278123 + 123829 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-24I21.1 NA 0.024 10-20% Testis 3.117907457 HCC,PAAD NA NA boxplot ZNRF2P1 zinc and ring finger 2 pseudogene 1 chr7 32728569 32729011 + 443 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ZNRF2P1 NA 0.459 30-40% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-757G1.5 NA chr11 68941503 68942852 - 1350 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-757G1.5 NA 0.012 40-50% NA NA Breast_cancer,Normal NA NA boxplot HSPA8P7 heat shock protein family A (Hsp70) member 8 pseudogene 7 chrX 114774828 114776775 - 1948 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HSPA8P7 NA 0.2 90-100% Testis 4.523949469 HCC,Normal NA NA boxplot PCAT1 prostate cancer associated transcript 1 (non-protein coding) chr8 126847055 127021014 + 173960 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PCAT1 NA 0.294 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CTD-2014B16.3 NA chr14 65957297 66004523 - 47227 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2014B16.3 NA 0.012 60-70% NA NA Breast_cancer,HCC NA NA boxplot KRT8P5 keratin 8 pseudogene 5 chr18 44320800 44322257 - 1458 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KRT8P5 NA 0.129 10-20% Testis 4.906892038 Breast_cancer,CHD,CRC,HCC,Normal NA NA boxplot LINC01139 long intergenic non-protein coding RNA 1139 chr1 238480384 238486023 - 5640 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01139 NA 0.035 10-20% NA NA Normal,PAAD NA NA boxplot RP11-1055B8.4 NA chr17 81388126 81390256 - 2131 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1055B8.4 NA 0.059 60-70% NA NA Breast_cancer,CRC,PAAD NA NA boxplot RP11-242O24.3 NA chr1 29144494 29146994 - 2501 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-242O24.3 NA 0.082 60-70% NA NA CRC,HCC,Normal NA NA boxplot HS6ST1P1 heparan sulfate 6-O-sulfotransferase 1 pseudogene 1 chr1 21428303 21429536 + 1234 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HS6ST1P1 NA 0.353 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP4-635A23.6 NA chr1 185292384 185294372 - 1989 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-635A23.6 NA 0.341 10-20% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-315I20.1 NA chr1 145926590 145959179 + 32590 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-315I20.1 NA 0.882 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(up),PAAD(up) NA boxplot PPIAP22 peptidylprolyl isomerase A (cyclophilin A) pseudogene 22 chr21 18857779 18858276 + 498 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PPIAP22 NA 1 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-455G16.1 NA chr4 119192773 119212644 - 19872 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-455G16.1 NA 0.106 30-40% NA NA CRC,HCC,Normal NA NA boxplot RP11-758P17.2 NA chr7 100435257 100436510 + 1254 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-758P17.2 NA 0.165 50-60% NA NA CRC,Normal,PAAD NA NA boxplot AC002066.1 NA chr7 116238260 116499465 - 261206 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC002066.1 exo_circ_004228 0.094 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-31F19.1 NA chr9 547317 549531 + 2215 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-31F19.1 NA 0.106 20-30% Pituitary 1.236399722 CRC,HCC,Normal,PAAD NA NA boxplot CTC-360J11.4 NA chr19 57175233 57177921 + 2689 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-360J11.4 NA 0.071 70-80% NA NA CRC,Normal NA NA boxplot H2AFZP3 H2A histone family member Z pseudogene 3 chr13 99215372 99215758 - 387 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=H2AFZP3 NA 0.012 90-100% NA NA HCC NA NA boxplot AF038458.4 NA chr19 35957121 35957382 - 262 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AF038458.4 NA 0.153 70-80% Brain 4.906892038 CRC,HCC,Normal NA NA boxplot UBE2V1P1 ubiquitin conjugating enzyme E2 variant 1 pseudogene 1 chr20 3361880 3362324 - 445 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=UBE2V1P1 NA 0.153 80-90% NA NA CRC,HCC,Normal,PAAD NA NA boxplot AC079354.5 NA chr2 202178660 202179391 - 732 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC079354.5 NA 0.035 10-20% Testis 4.457076853 CRC,HCC NA NA boxplot RP11-347H15.2 NA chr11 50268161 50269273 + 1113 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-347H15.2 NA 0.224 70-80% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-384B12.3 NA chr1 87045875 87046700 + 826 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-384B12.3 NA 0.612 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-536P6.3 NA chr22 48448890 48451217 + 2328 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-536P6.3 NA 0.012 30-40% Testis 4.906892038 Breast_cancer NA NA boxplot AC009229.6 NA chr2 38132637 38138946 - 6310 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC009229.6 NA 0.024 20-30% Nerve 2.067781617 PAAD NA NA boxplot PDCL2P2 phosducin-like 2 pseudogene 2 chr11 65160194 65160382 - 189 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PDCL2P2 NA 0.165 80-90% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-632C17__A.1 NA chr6 117998975 117999448 + 474 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-632C17__A.1 NA 0.929 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-635N19.1 NA chr18 63367328 63381629 + 14302 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-635N19.1 exo_circ_023135 0.365 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-1085N6.2 NA chr14 56633244 56648658 - 15415 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1085N6.2 NA 0.047 90-100% Testis 1.550789431 HCC,Normal,PAAD NA NA boxplot RP11-353N14.5 NA chr17 79915252 79926725 - 11474 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-353N14.5 NA 0.035 70-80% NA NA Breast_cancer,CRC,Normal NA NA boxplot CKS1BP6 CDC28 protein kinase regulatory subunit 1B pseudogene 6 chrX 30617454 30617693 + 240 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CKS1BP6 NA 0.012 0-10% NA NA CHD NA NA boxplot RP11-4L24.4 NA chr9 41269916 41273997 - 4082 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-4L24.4 NA 0.235 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot ZNF436-AS1 ZNF436 antisense RNA 1 chr1 23368997 23371839 + 2843 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ZNF436-AS1 NA 0.247 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC004985.12 NA chr7 43961590 43973323 - 11734 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC004985.12 NA 0.271 80-90% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot LINC01344 long intergenic non-protein coding RNA 1344 chr1 182129310 182314061 - 184752 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01344 NA 0.094 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-264B17.3 NA chr16 28974804 28990783 + 15980 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-264B17.3 NA 0.929 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot ZNF658B zinc finger protein 658B (pseudogene) chr9 39443815 39508885 - 65071 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ZNF658B NA 0.859 20-30% NA NA CHD,CRC,HCC,Normal,PAAD HCC(up) NA boxplot RP11-297B17.3 NA chr9 37002697 37008040 + 5344 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-297B17.3 NA 0.788 0-10% Spleen 4.169955967 CRC,HCC,Normal,PAAD CHD(down),PAAD(down) NA boxplot RP11-532F12.5 NA chr15 40835808 40844387 - 8580 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-532F12.5 NA 0.329 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot EIF3FP1 eukaryotic translation initiation factor 3 subunit F pseudogene 1 chr21 10330732 10331537 + 806 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=EIF3FP1 NA 0.012 30-40% NA NA Breast_cancer,PAAD NA NA boxplot RP11-403I13.10 NA chr1 143784376 143784671 + 296 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-403I13.10 NA 0.012 30-40% NA NA NA NA NA boxplot NUCB1-AS1 NUCB1 antisense RNA 1 chr19 48910930 48918891 - 7962 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NUCB1-AS1 NA 0.506 30-40% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up) NA boxplot ZNF137P zinc finger protein 137, pseudogene chr19 52588505 52597345 + 8841 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ZNF137P exo_circ_008606 0.906 0-10% NA NA CHD,CRC,HCC,Normal,PAAD CHD(down) NA boxplot UG0898H09 uncharacterized LOC643763 chr8 62977861 62984900 + 7040 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=UG0898H09 NA 0.024 70-80% NA NA Breast_cancer,Normal NA NA boxplot RP1-199J3.7 NA chr6 99568097 99569096 + 1000 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-199J3.7 NA 0.329 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot SLC9B1P1 solute carrier family 9, subfamily B (NHA1, cation proton antiporter 1), member 1 pseudogene 1 chrY 11340579 11385687 - 45109 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SLC9B1P1 NA 0.012 60-70% Testis 4.906892038 Normal NA NA boxplot KB-1208A12.3 NA chr8 98041726 98044121 + 2396 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KB-1208A12.3 NA 0.647 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot XXbac-BPG248L24.12 NA chr6 31356647 31357637 + 991 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=XXbac-BPG248L24.12 NA 0.471 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down) NA boxplot AP000350.6 NA chr22 23926900 23929574 + 2675 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AP000350.6 NA 0.012 30-40% NA NA Normal NA NA boxplot DPY19L1P1 DPY19L1 pseudogene 1 chr7 32580949 32761787 - 180839 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DPY19L1P1 exo_circ_004280,exo_circ_016443 0.988 0-10% NA NA CHD,CRC,HCC,Normal,PAAD CHD(down),CRC(down) NA boxplot SAPCD2P3 suppressor APC domain containing 2 pseudogene 3 chr7 66556216 66557065 + 850 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SAPCD2P3 NA 0.012 80-90% NA NA Breast_cancer,Normal NA NA boxplot RP11-718O11.1 NA chr15 45705078 45931069 + 225992 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-718O11.1 NA 0.035 50-60% NA NA CRC,Normal NA NA boxplot ADAM1A ADAM metallopeptidase domain 1A (pseudogene) chr12 111899263 111901391 + 2129 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ADAM1A NA 0.412 40-50% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot SDHAP2 succinate dehydrogenase complex subunit A, flavoprotein pseudogene 2 chr3 195658096 195685904 + 27809 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SDHAP2 NA 0.976 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up),CRC(up),PAAD(up) NA boxplot RP11-317J19.1 NA chr11 86431590 86622867 + 191278 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-317J19.1 NA 0.129 30-40% Testis 4.906892038 CRC,HCC,Normal,PAAD NA NA boxplot LINC00211 long intergenic non-protein coding RNA 211 chr2 37826247 37876274 - 50028 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00211 exo_circ_038341,exo_circ_047229,exo_circ_042035 0.976 0-10% Whole Blood 2.41653787 Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down) NA boxplot TOX4P1 TOX high mobility group box family member 4 pseudogene 1 chr4 112455924 112457785 + 1862 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TOX4P1 NA 0.518 60-70% Testis 4.025535674 CHD,CRC,HCC,Normal,PAAD NA NA boxplot AC068138.1 NA chr2 226180044 226185371 - 5328 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC068138.1 NA 0.165 40-50% Thyroid 4.481917488 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-360F5.1 NA chr4 39112677 39126818 - 14142 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-360F5.1 NA 0.576 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-763B22.11 NA chr1 144661200 144679513 + 18314 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-763B22.11 NA 0.271 90-100% NA NA CRC,HCC,Normal,PAAD NA NA boxplot U66059.58 NA chr7 142285750 142288869 + 3120 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=U66059.58 NA 0.012 50-60% NA NA CRC NA NA boxplot RP11-706C16.8 NA chr8 142785374 142812120 + 26747 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-706C16.8 NA 0.012 90-100% Skin 3.521294725 Breast_cancer,CRC NA NA boxplot RP11-15A1.2 NA chr19 43902001 43926545 + 24545 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-15A1.2 NA 0.071 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot AC002480.2 NA chr7 22649960 22665533 - 15574 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC002480.2 NA 0.118 50-60% Testis 4.773862447 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-170M17.1 NA chr10 63664664 63990568 + 325905 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-170M17.1 NA 0.012 70-80% Testis 4.125941477 Breast_cancer,HCC NA NA boxplot RPSAP9 ribosomal protein SA pseudogene 9 chr9 76398699 76399586 + 888 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPSAP9 NA 0.929 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up),CRC(up),HCC(up),PAAD(up) NA boxplot RP11-76E17.3 NA chr15 93863109 93878356 + 15248 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-76E17.3 NA 0.471 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-56M3.1 NA chr10 91152605 91153349 - 745 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-56M3.1 NA 0.435 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-649A18.4 NA chr17 75145261 75146546 - 1286 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-649A18.4 NA 0.094 30-40% NA NA CRC,Normal,PAAD NA NA boxplot INTS4P1 integrator complex subunit 4 pseudogene 1 chr7 65141225 65234216 + 92992 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=INTS4P1 NA 0.494 30-40% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot FER1L6-AS2 FER1L6 antisense RNA 2 chr8 124046073 124171522 - 125450 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FER1L6-AS2 NA 0.024 70-80% Testis 4.614678566 Breast_cancer,CRC,PAAD NA NA boxplot DOCK11P1 dedicator of cytokinesis 11 pseudogene 1 chr14 44860316 44866247 - 5932 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DOCK11P1 NA 0.071 70-80% NA NA CRC,Normal,PAAD NA NA boxplot RP11-844P9.1 NA chr5 176124210 176131461 - 7252 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-844P9.1 NA 0.141 70-80% NA NA CRC,HCC,Normal NA NA boxplot RP11-845C23.3 NA chr18 58398663 58400082 - 1420 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-845C23.3 NA 0.024 80-90% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot RP11-46D6.1 NA chr16 46622861 46624451 - 1591 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-46D6.1 exo_circ_051687 0.812 10-20% NA NA CRC,HCC,Normal,PAAD CRC(up),HCC(up),PAAD(up) NA boxplot AC009133.21 NA chr16 29804430 29804990 - 561 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC009133.21 NA 0.2 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot FNTAL1 NA chr11 86195132 86196266 + 1135 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FNTAL1 NA 0.071 90-100% NA NA Breast_cancer,HCC,Normal NA NA boxplot LINC00322 long intergenic non-protein coding RNA 322 chr21 43322417 43332039 - 9623 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00322 NA 0.035 10-20% NA NA Breast_cancer,PAAD NA NA boxplot SIGLEC19P NA chr19 51143826 51144196 + 371 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SIGLEC19P NA 0.059 50-60% NA NA Breast_cancer,CRC,Normal NA NA boxplot C20orf166-AS1 C20orf166 antisense RNA 1 chr20 62544343 62551526 - 7184 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=C20orf166-AS1 NA 0.012 90-100% NA NA Breast_cancer NA NA boxplot GAS6-AS1 GAS6 antisense RNA 1 chr13 113815630 113845744 + 30115 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GAS6-AS1 NA 0.718 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),HCC(down) Yes boxplot CTB-30L5.1 uncharacterized LOC102724339 chr7 106570947 106598908 - 27962 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTB-30L5.1 exo_circ_049928 0.318 30-40% Testis 1.33779191 CRC,HCC,Normal,PAAD NA NA boxplot TPT1P3 tumor protein, translationally-controlled 1 pseudogene 3 chr3 141709016 141709832 - 817 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TPT1P3 NA 0.012 0-10% NA NA Normal NA NA boxplot CTD-3080P12.3 uncharacterized LOC101928857 chr5 1173141 1178605 - 5465 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-3080P12.3 NA 0.024 90-100% Liver 2.107886025 Breast_cancer,HCC,PAAD NA NA boxplot RP11-298C3.2 NA chrX 25645722 25646327 - 606 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-298C3.2 NA 0.929 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-597M12.1 NA chr17 12990149 12990610 - 462 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-597M12.1 NA 0.094 50-60% NA NA CRC,Normal,PAAD NA NA boxplot AC099850.1 NA chr17 59106598 59118267 + 11670 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC099850.1 NA 0.212 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CTD-3094K11.1 NA chr15 90839724 90841378 + 1655 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-3094K11.1 NA 0.271 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot GMCL1P1 germ cell-less, spermatogenesis associated 1 pseudogene 1 chr5 178185719 178187299 - 1581 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GMCL1P1 NA 0.012 10-20% Testis 4.906892038 Normal NA NA boxplot AC006539.6 NA chr19 20056466 20056594 - 129 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC006539.6 NA 0.012 80-90% NA NA CRC NA NA boxplot CTC-425O23.5 NA chr19 40355842 40360606 + 4765 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-425O23.5 NA 0.224 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-435O5.5 NA chr9 95506235 95507636 + 1402 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-435O5.5 NA 0.4 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot ALG9-IT1 ALG9 intronic transcript 1 chr11 111817214 111829212 - 11999 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ALG9-IT1 NA 0.024 20-30% NA NA Breast_cancer,CRC NA NA boxplot LINC00298 long intergenic non-protein coding RNA 298 chr2 7922425 8278084 - 355660 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00298 exo_circ_030946 0.118 40-50% NA NA CRC,Normal,PAAD NA NA boxplot LINC00907 long intergenic non-protein coding RNA 907 chr18 42159283 42691422 + 532140 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00907 exo_circ_052038 0.294 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-122D10.1 NA chr15 36876379 36887035 - 10657 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-122D10.1 NA 0.012 80-90% Testis 3.017777083 NA NA NA boxplot KB-1980E6.3 NA chr8 102528740 102538668 + 9929 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KB-1980E6.3 NA 0.153 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC009133.17 NA chr16 29745247 29748299 + 3053 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC009133.17 NA 0.259 30-40% Spleen 2.007836101 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-1C1.6 NA chr5 10493291 10494094 - 804 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1C1.6 NA 0.047 30-40% NA NA HCC,PAAD NA NA boxplot RP11-1060G2.2 NA chr12 93945041 93947813 + 2773 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1060G2.2 NA 0.012 80-90% NA NA NA NA NA boxplot AC073343.13 NA chr7 6663974 6708901 + 44928 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC073343.13 NA 0.141 40-50% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot RP11-280K24.4 NA chr14 51765276 51825422 + 60147 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-280K24.4 NA 0.024 60-70% Testis 3.629024776 Breast_cancer,HCC,PAAD NA NA boxplot RPS4XP1 ribosomal protein S4X pseudogene 1 chr12 100009052 100009838 - 787 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPS4XP1 NA 0.059 60-70% NA NA CRC,Normal,PAAD NA NA boxplot RP11-445L13__B.3 NA chr6 82932601 82938677 + 6077 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-445L13__B.3 NA 0.012 90-100% NA NA Normal NA NA boxplot UBA52P8 ubiquitin A-52 residue ribosomal protein fusion product 1 pseudogene 8 chr16 48334471 48334854 - 384 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=UBA52P8 NA 0.024 80-90% NA NA CRC NA NA boxplot AP000354.2 NA chr22 24269346 24270134 - 789 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AP000354.2 NA 0.012 80-90% Testis 4.906892038 Normal NA NA boxplot LMCD1-AS1 LMCD1 antisense RNA 1 (head to head) chr3 7952805 8611924 - 659120 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LMCD1-AS1 NA 0.224 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-107E5.4 NA chr2 144444848 144450450 + 5603 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-107E5.4 NA 0.012 40-50% NA NA Normal NA NA boxplot RP11-573M3.3 NA chr11 93152075 93152750 + 676 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-573M3.3 NA 0.012 90-100% NA NA HCC NA NA boxplot U91328.19 NA chr6 25992662 26001775 + 9114 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=U91328.19 NA 0.718 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot XXbac-BPG118E17.10 NA chr6 30961403 30962396 - 994 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=XXbac-BPG118E17.10 NA 0.012 70-80% NA NA HCC NA NA boxplot RP11-101E5.7 NA chr9 61063752 61113954 - 50203 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-101E5.7 NA 0.059 40-50% NA NA HCC,PAAD NA NA boxplot RP11-890B15.3 NA chr11 130866254 130870247 - 3994 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-890B15.3 NA 0.682 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(up) NA boxplot HERC2P8 hect domain and RLD 2 pseudogene 8 chr16 33094204 33129090 - 34887 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HERC2P8 NA 0.2 60-70% Testis 3.429194789 Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-460I13.2 NA chr1 27938875 27960193 - 21319 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-460I13.2 NA 0.071 70-80% NA NA CRC,HCC,PAAD NA NA boxplot CTB-109A12.1 NA chr5 157362615 157460078 - 97464 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTB-109A12.1 NA 0.035 60-70% NA NA Breast_cancer,CRC NA NA boxplot RP11-316M1.12 NA chr1 150965245 150966256 + 1012 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-316M1.12 NA 0.918 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot CTD-2260A17.3 NA chr5 96804353 96806105 + 1753 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2260A17.3 NA 0.035 80-90% NA NA Breast_cancer,CRC,Normal NA NA boxplot AC004381.8 NA chr16 20711473 20732990 + 21518 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC004381.8 exo_circ_034469 0.588 20-30% NA NA CRC,HCC,Normal,PAAD CRC(up) NA boxplot BTBD7P1 BTB (POZ) domain containing 7 pseudogene 1 chr10 13156684 13158136 - 1453 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=BTBD7P1 NA 0.224 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot SNRPGP15 small nuclear ribonucleoprotein polypeptide G pseudogene 15 chr19 14489388 14489609 + 222 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SNRPGP15 NA 0.8 10-20% NA NA CHD,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down) NA boxplot RP5-1172N10.4 NA chrX 41233633 41234283 + 651 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-1172N10.4 NA 0.541 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot EXOC3-AS1 EXOC3 antisense RNA 1 chr5 441498 443160 - 1663 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=EXOC3-AS1 NA 0.388 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot DANCR differentiation antagonizing non-protein coding RNA chr4 52712404 52720351 + 7948 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DANCR NA 1 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-54O7.17 NA chr1 995966 998051 - 2086 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-54O7.17 NA 0.071 70-80% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot SPTLC1P5 serine palmitoyltransferase, long chain base subunit 1 pseudogene 5 chr13 77659413 77659664 + 252 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SPTLC1P5 NA 0.012 60-70% Testis 4.648077305 Normal NA NA boxplot RP1-93H18.1 NA chr6 116280199 116370273 + 90075 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-93H18.1 NA 0.106 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot OR5AZ1P olfactory receptor family 5 subfamily AZ member 1 pseudogene chr11 57917297 57918239 - 943 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=OR5AZ1P NA 0.012 60-70% Testis 4.906892038 Breast_cancer,Normal NA NA boxplot AC007620.3 NA chr3 179396961 179399191 + 2231 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC007620.3 NA 0.318 10-20% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot CTC-490E21.11 NA chr19 40840159 40842039 + 1881 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-490E21.11 NA 0.071 70-80% NA NA CRC,Normal NA NA boxplot RP4-635E18.8 NA chr1 11029659 11030528 + 870 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-635E18.8 NA 0.282 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CTC-497E21.5 NA chr11 13054615 13134839 - 80225 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-497E21.5 NA 0.012 10-20% NA NA NA NA NA boxplot EBLN3 endogenous Bornavirus-like nucleoprotein 3 chr9 37079857 37090507 + 10651 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=EBLN3 exo_circ_044960 1 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot LINC01169 long intergenic non-protein coding RNA 1169 chr15 66582190 66685794 + 103605 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01169 NA 0.094 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot ZNF790-AS1 ZNF790 antisense RNA 1 chr19 36797518 36828115 + 30598 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ZNF790-AS1 NA 0.682 10-20% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot RP11-626G11.5 NA chr16 19062499 19067691 - 5193 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-626G11.5 NA 0.047 70-80% Testis 4.300799745 Breast_cancer,HCC,Normal,PAAD NA NA boxplot HLA-DPB2 major histocompatibility complex, class II, DP beta 2 (pseudogene) chr6 33112451 33129084 + 16634 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HLA-DPB2 NA 0.659 10-20% Spleen 1.299085462 Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-2K6.1 NA chr16 63397707 63397946 + 240 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-2K6.1 NA 0.012 90-100% NA NA Normal NA NA boxplot RP11-3B7.1 NA chr3 49260085 49261316 + 1232 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-3B7.1 NA 0.012 0-10% Testis 2.00633065 Breast_cancer,Normal NA NA boxplot CTA-414D7.1 NA chr22 44102779 44116232 + 13454 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTA-414D7.1 NA 0.176 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-574K11.24 NA chr10 73742995 73744230 - 1236 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-574K11.24 NA 0.788 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-10A7.1 NA chr11 109486968 109487424 - 457 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-10A7.1 NA 0.012 40-50% Brain 4.906892038 Normal NA NA boxplot RP11-373D23.2 NA chr2 28396815 28397110 + 296 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-373D23.2 NA 0.118 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot SLC7A5P1 solute carrier family 7 (amino acid transporter light chain, L system), member 5 pseudogene 1 chr16 29613104 29613640 - 537 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SLC7A5P1 NA 0.294 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot OSMR-AS1 OSMR antisense RNA 1 (head to head) chr5 38710367 38845829 - 135463 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=OSMR-AS1 exo_circ_010180,exo_circ_044259 0.118 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RPL7P21 ribosomal protein L7 pseudogene 21 chr5 143332605 143333239 + 635 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL7P21 NA 0.553 60-70% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot MIR4453 microRNA 4453 chr4 152536264 152539263 + 3000 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MIR4453 NA 0.506 30-40% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot AC079780.3 NA chr7 23480753 23480959 + 207 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC079780.3 NA 0.071 80-90% NA NA CRC,Normal NA NA boxplot RP11-563N6.6 NA chr10 48878022 48878649 + 628 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-563N6.6 NA 0.118 70-80% Testis 2.831790315 CRC,Normal NA NA boxplot AP001626.2 NA chr21 42648271 42651244 - 2974 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AP001626.2 NA 0.024 50-60% NA NA Breast_cancer,Normal NA NA boxplot LINC01497 long intergenic non-protein coding RNA 1497 chr17 69961707 69983538 + 21832 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01497 NA 0.012 20-30% NA NA Breast_cancer,HCC NA NA boxplot ASMTL-AS1 ASMTL antisense RNA 1 chrY 1401769 1414028 + 12260 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ASMTL-AS1 NA 0.188 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot GLTSCR1-AS1 GLTSCR1 antisense RNA 1 chr19 47615699 47626395 - 10697 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GLTSCR1-AS1 NA 0.012 80-90% NA NA Breast_cancer,CRC NA NA boxplot RP11-179A10.2 NA chr11 11135482 11137658 + 2177 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-179A10.2 NA 0.012 70-80% NA NA PAAD NA NA boxplot RP11-429P3.8 NA chr16 50072862 50074986 + 2125 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-429P3.8 NA 0.094 40-50% NA NA Breast_cancer,CRC,Normal,PAAD NA NA boxplot UBE2NL ubiquitin conjugating enzyme E2N-like (gene/pseudogene) chrX 143884071 143885255 + 1185 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=UBE2NL NA 0.024 90-100% NA NA CRC,PAAD NA NA boxplot TXLNGY taxilin gamma pseudogene, Y-linked chrY 19567313 19606274 + 38962 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TXLNGY NA 0.612 0-10% NA NA CHD,CRC,HCC,Normal,PAAD HCC(up),PAAD(up) NA boxplot HMGN1P37 high mobility group nucleosome binding domain 1 pseudogene 37 chrX 154817099 154817401 - 303 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HMGN1P37 NA 0.153 90-100% Spleen 2.865598036 Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot CTC-421K24.1 NA chr17 37454171 37454931 + 761 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-421K24.1 NA 0.035 80-90% NA NA CRC NA NA boxplot RP11-290F24.3 NA chr11 6108135 6185576 - 77442 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-290F24.3 NA 0.059 40-50% Fallopian Tube 4.906892038 HCC,Normal NA NA boxplot AC003973.3 NA chr19 21965708 21968529 - 2822 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC003973.3 NA 0.176 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CTD-3126B10.2 NA chr16 2592514 2594563 + 2050 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-3126B10.2 NA 0.118 70-80% NA NA Breast_cancer,CRC,Normal NA NA boxplot IBA57-AS1 IBA57 antisense RNA 1 (head to head) chr1 228164086 228165512 - 1427 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=IBA57-AS1 NA 0.024 80-90% Testis 1.757231735 CRC,Normal NA NA boxplot RP11-418H16.1 NA chr2 65623272 65628424 + 5153 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-418H16.1 NA 0.035 90-100% NA NA HCC NA NA boxplot NDUFB1P1 NADH:ubiquinone oxidoreductase subunit B1 pseudogene 1 chr3 48181547 48181726 + 180 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NDUFB1P1 NA 0.129 80-90% Testis 4.906892038 CRC,HCC,Normal NA NA boxplot SNHG11 small nucleolar RNA host gene 11 chr20 38446578 38450921 + 4344 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SNHG11 NA 0.741 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot AC073069.2 NA chr2 176338637 176339077 + 441 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC073069.2 NA 0.012 90-100% NA NA Normal NA NA boxplot RP11-527D7.1 NA chr1 241424292 241433492 + 9201 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-527D7.1 NA 0.024 40-50% Brain 3.040350785 Breast_cancer,CRC,HCC NA NA boxplot RP11-252A24.3 NA chr16 74367462 74369826 + 2365 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-252A24.3 NA 0.106 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot PCDHA14 protocadherin alpha 14 pseudogene chr5 140861224 140863521 + 2298 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PCDHA14 NA 0.024 60-70% NA NA Breast_cancer,HCC,PAAD NA NA boxplot RP11-477N12.6 NA chr17 9764188 9805073 + 40886 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-477N12.6 NA 0.035 10-20% NA NA Breast_cancer,PAAD NA NA boxplot RP11-168K11.3 NA chr9 113619228 113622634 + 3407 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-168K11.3 NA 0.012 80-90% Testis 1.899005441 Breast_cancer,Normal NA NA boxplot CTD-2302E22.2 NA chr14 63598874 63599248 + 375 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2302E22.2 NA 0.2 10-20% NA NA HCC,Normal,PAAD NA NA boxplot HLX-AS1 HLX antisense RNA 1 chr1 220832763 220880140 - 47378 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HLX-AS1 NA 0.282 50-60% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot AIG1P1 androgen-induced 1 pseudogene 1 chr5 39022411 39022558 + 148 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AIG1P1 NA 0.012 50-60% Cervix 4.906892038 PAAD NA NA boxplot BTBD7P2 BTB (POZ) domain containing 7 pseudogene 2 chr10 111322778 111323397 + 620 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=BTBD7P2 exo_circ_033832,exo_circ_040942,exo_circ_050532,exo_circ_050533,exo_circ_035929,exo_circ_024737,exo_circ_052790,exo_circ_050534 0.024 80-90% NA NA CRC NA NA boxplot RP11-370K11.1 NA chr1 243702857 243740821 - 37965 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-370K11.1 NA 0.494 40-50% Testis 4.263641065 CRC,HCC,Normal,PAAD NA NA boxplot RP11-112J3.16 NA chr9 35772163 35790432 + 18270 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-112J3.16 NA 0.2 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot LINC00954 long intergenic non-protein coding RNA 954 chr2 19868860 19885047 + 16188 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00954 NA 0.271 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-367G6.3 NA chr6 25014952 25042170 - 27219 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-367G6.3 exo_circ_049796 0.929 0-10% Pituitary 2.188979372 Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot NHP2P1 NHP2 ribonucleoprotein pseudogene 1 chr10 92216332 92216793 + 462 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NHP2P1 NA 0.094 80-90% NA NA Breast_cancer,CHD,HCC,Normal,PAAD NA NA boxplot UCKL1-AS1 UCKL1 antisense RNA 1 chr20 63953384 63956985 + 3602 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=UCKL1-AS1 NA 0.176 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot KRT8P50 keratin 8 pseudogene 50 chr15 42800968 42802405 - 1438 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KRT8P50 NA 0.106 60-70% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot RP11-872D17.4 NA chr11 57325603 57327958 + 2356 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-872D17.4 NA 0.541 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CTC-525D6.2 NA chr19 29489775 29526948 - 37174 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-525D6.2 NA 0.012 90-100% Brain 3.9660711 CRC NA NA boxplot RP11-462G2.1 NA chr6 70394887 70399417 + 4531 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-462G2.1 NA 0.035 20-30% Pancreas 3.297370549 HCC,PAAD NA NA boxplot RPSAP19 ribosomal protein SA pseudogene 19 chr1 101786340 101787219 - 880 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPSAP19 exo_circ_037856 1 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CRC(down),PAAD(down) NA boxplot AC073283.7 NA chr2 47067822 47071204 + 3383 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC073283.7 NA 0.106 70-80% NA NA Breast_cancer,CRC,Normal NA NA boxplot RP4-801G22.2 NA chr1 157629939 157630728 - 790 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-801G22.2 NA 0.071 90-100% NA NA CRC,Normal NA NA boxplot RP11-266K4.9 NA chr12 8235415 8242564 + 7150 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-266K4.9 NA 0.106 40-50% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot RP11-104N10.2 NA chr16 89516797 89522217 + 5421 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-104N10.2 NA 0.506 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CRC(up),PAAD(up) NA boxplot HSPA8P3 heat shock protein family A (Hsp70) member 8 pseudogene 3 chr10 26714622 26715832 + 1211 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HSPA8P3 NA 0.071 50-60% Small Intestine 3.858072065 Breast_cancer,CRC,Normal,PAAD NA NA boxplot RP6-99M1.3 NA chrX 45764772 45765299 - 528 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP6-99M1.3 NA 0.047 20-30% NA NA Normal,PAAD NA NA boxplot CTD-2651B20.3 NA chr15 45251580 45279251 - 27672 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2651B20.3 NA 0.059 60-70% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot MTX1P1 metaxin 1 pseudogene 1 chr1 155230975 155234325 + 3351 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MTX1P1 NA 0.776 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up),HCC(up),PAAD(up) NA boxplot AC007098.1 NA chr2 62826064 62858438 - 32375 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC007098.1 NA 0.094 70-80% NA NA CRC,Normal,PAAD NA NA boxplot AC144449.1 NA chr2 149587196 149848233 + 261038 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC144449.1 NA 0.259 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-546B15.1 NA chr15 42208413 42226990 + 18578 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-546B15.1 NA 0.035 60-70% Testis 2.604477474 HCC,Normal,PAAD NA NA boxplot MTCO2P12 MT-CO2 pseudogene 12 chr1 632757 633438 + 682 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MTCO2P12 NA 0.894 20-30% NA NA CRC,HCC,Normal,PAAD CRC(up),PAAD(up) NA boxplot RP11-259O2.3 NA chr5 1968094 1969013 + 920 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-259O2.3 NA 0.012 90-100% NA NA CRC NA NA boxplot CTD-2049O4.1 NA chr16 27678940 27718806 - 39867 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2049O4.1 NA 0.012 60-70% NA NA Breast_cancer,Normal NA NA boxplot TLE1P1 transducin like enhancer of split 1 pseudogene 1 chrX 65408084 65408672 + 589 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TLE1P1 NA 0.353 50-60% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot BRWD1-AS2 NA chr21 39313935 39314962 + 1028 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=BRWD1-AS2 NA 0.247 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP4-777O23.1 NA chr7 30550217 30551569 + 1353 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-777O23.1 NA 0.047 90-100% NA NA CRC,Normal NA NA boxplot RP11-75C23.1 NA chr1 197437976 197447469 - 9494 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-75C23.1 NA 0.024 40-50% NA NA CRC,Normal NA NA boxplot RP3-476K8.4 NA chr1 26454653 26455187 - 535 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-476K8.4 NA 0.118 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-136K7.2 NA chr5 71351855 71446342 - 94488 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-136K7.2 NA 0.059 80-90% Liver 1.730694589 HCC,Normal,PAAD NA NA boxplot RP11-379F4.6 NA chr3 158695367 158695581 + 215 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-379F4.6 NA 0.012 90-100% NA NA Breast_cancer,CRC,HCC,PAAD NA NA boxplot RP11-533N14.3 NA chr1 147697794 147699335 + 1542 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-533N14.3 NA 0.012 70-80% NA NA Normal NA NA boxplot VAC14-AS1 VAC14 antisense RNA 1 chr16 70755098 70773251 + 18154 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=VAC14-AS1 NA 0.094 10-20% Brain 1.179589574 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP1-37M3.8 NA chr22 45792418 45793636 - 1219 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-37M3.8 NA 0.271 60-70% NA NA CRC,HCC,Normal NA NA boxplot RP11-687E1.2 NA chr18 42052705 42053030 + 326 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-687E1.2 NA 0.047 70-80% NA NA CRC,Normal,PAAD NA NA boxplot RP11-314D7.2 NA chr12 73159190 73208317 + 49128 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-314D7.2 NA 0.012 90-100% Testis 4.906892038 NA NA NA boxplot HDAC1P1 histone deacetylase 1 pseudogene 1 chr10 94137748 94139500 + 1753 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HDAC1P1 NA 0.024 40-50% Testis 2.549969905 Breast_cancer,PAAD NA NA boxplot CTB-131K11.1 NA chr17 39401793 39406233 + 4441 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTB-131K11.1 exo_circ_034580 0.494 10-20% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot CTC-250P20.2 NA chr5 72996920 72997642 + 723 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-250P20.2 NA 0.071 50-60% NA NA Breast_cancer,CRC,HCC NA NA boxplot SLC25A36P1 SLC25A36 pseudogene 1 chr19 56386226 56386690 + 465 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SLC25A36P1 NA 0.024 40-50% NA NA CRC,PAAD NA NA boxplot AC008985.1 NA chr19 47661657 47663895 - 2239 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC008985.1 NA 0.024 70-80% NA NA Normal NA NA boxplot RP3-394A18.1 NA chr22 29978950 30028236 - 49287 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-394A18.1 NA 0.859 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot RP11-536P16.4 NA chr15 28545912 28549777 + 3866 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-536P16.4 NA 0.012 20-30% Testis 4.906892038 PAAD NA NA boxplot BTBD10P1 BTB (POZ) domain containing 10 pseudogene 1 chr12 52748776 52750127 + 1352 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=BTBD10P1 NA 0.212 60-70% NA NA CRC,HCC,Normal NA NA boxplot LINC00272 long intergenic non-protein coding RNA 272 chr1 182407621 182414815 + 7195 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00272 exo_circ_043120 0.024 50-60% Testis 4.178283468 CRC NA NA boxplot RP5-1115A15.2 NA chr1 8512653 8513021 + 369 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-1115A15.2 NA 0.012 30-40% NA NA Breast_cancer,Normal NA NA boxplot EPB41L4A-AS1 EPB41L4A antisense RNA 1 chr5 112160526 112164276 + 3751 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=EPB41L4A-AS1 NA 1 0-10% NA NA CHD,CRC,HCC,Normal,PAAD NA Yes boxplot PSMD10P3 proteasome 26S subunit, non-ATPase, 10 pseudogene 3 chr13 73036401 73036848 + 448 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PSMD10P3 NA 0.012 20-30% NA NA PAAD NA NA boxplot RP11-212I21.4 NA chr16 55538200 55542027 + 3828 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-212I21.4 NA 0.094 40-50% NA NA CRC,Normal,PAAD NA NA boxplot AC016831.6 NA chr7 130840204 130843725 - 3522 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC016831.6 NA 0.024 80-90% NA NA Breast_cancer,Normal NA NA boxplot RP11-298C2.1 NA chr3 71276087 71289616 - 13530 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-298C2.1 exo_circ_049152,exo_circ_043926 0.188 10-20% NA NA CRC,Normal,PAAD NA NA boxplot RP11-688I9.5 NA chr11 126934886 126937150 - 2265 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-688I9.5 NA 0.012 20-30% NA NA Breast_cancer NA NA boxplot CTD-2562J15.6 NA chr19 16283359 16324514 - 41156 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2562J15.6 NA 0.129 50-60% Testis 1.859928407 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RPS23P5 ribosomal protein S23 pseudogene 5 chr5 82265157 82265259 - 103 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPS23P5 NA 0.012 0-10% NA NA Normal NA NA boxplot RP11-144G6.12 NA chr10 47517816 47553514 - 35699 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-144G6.12 NA 0.929 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(up),HCC(up),PAAD(up) NA boxplot RP11-55K22.2 NA chr6 136900233 136901529 - 1297 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-55K22.2 exo_circ_016306 0.165 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP4-761J14.8 NA chr12 6663260 6672069 + 8810 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-761J14.8 NA 0.353 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot RP11-234B24.2 NA chr12 4700417 4720102 - 19686 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-234B24.2 NA 0.012 20-30% NA NA Normal NA NA boxplot LILRP1 leukocyte immunoglobulin-like receptor pseudogene 1 chr19 54696604 54700905 + 4302 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LILRP1 NA 0.118 60-70% Whole Blood 3.304774395 Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-875H7.5 NA chr3 55493830 55505261 - 11432 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-875H7.5 NA 0.012 90-100% Bladder 3.281299689 NA NA NA boxplot YWHAEP1 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon pseudogene 1 chr7 64433830 64434592 + 763 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=YWHAEP1 NA 0.329 90-100% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot HMGN1P26 high mobility group nucleosome binding domain 1 pseudogene 26 chr15 62362029 62362331 - 303 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HMGN1P26 NA 0.012 30-40% Testis 4.551485374 Breast_cancer,CRC,PAAD NA NA boxplot PDLIM1P4 PDZ and LIM domain 1 pseudogene 4 chr3 98782188 98783193 + 1006 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PDLIM1P4 NA 0.282 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-569D9.6 NA chr13 114175485 114215835 - 40351 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-569D9.6 NA 0.376 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-112L18.1 NA chr4 81733385 81734207 - 823 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-112L18.1 NA 0.012 90-100% NA NA NA NA NA boxplot DNM3OS DNM3 opposite strand/antisense RNA chr1 172136531 172144794 - 8264 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DNM3OS exo_circ_018956 0.8 0-10% NA NA CHD,CRC,HCC,Normal,PAAD CHD(down),PAAD(down) Yes boxplot ANKRD20A19P ankyrin repeat domain 20 family member A19, pseudogene chr13 23939557 23946782 - 7226 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ANKRD20A19P NA 0.176 30-40% Testis 3.647386573 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-1398P2.1 NA chr4 1574062 1580253 - 6192 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1398P2.1 NA 0.894 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),PAAD(down) NA boxplot RP11-775C24.3 NA chr15 80990804 80993258 - 2455 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-775C24.3 NA 0.035 60-70% NA NA CRC,Normal NA NA boxplot RP11-295I5.3 NA chr12 25210652 25211233 + 582 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-295I5.3 NA 0.024 40-50% NA NA Normal,PAAD NA NA boxplot AP006621.6 NA chr11 781645 782105 + 461 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AP006621.6 NA 0.106 40-50% NA NA CRC,Normal,PAAD NA NA boxplot NAP1L4P1 nucleosome assembly protein 1-like 4 pseudogene 1 chr1 116532936 116534092 - 1157 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NAP1L4P1 NA 0.271 10-20% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RPL7P16 ribosomal protein L7 pseudogene 16 chr3 132243528 132244265 - 738 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL7P16 NA 0.024 0-10% NA NA CHD,Normal NA NA boxplot ARHGEF7-IT1 ARHGEF7 intronic transcript 1 chr13 111122652 111144264 + 21613 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ARHGEF7-IT1 NA 0.012 90-100% Testis 3.721622911 PAAD NA NA boxplot AC074338.4 NA chr7 33036212 33036382 - 171 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC074338.4 NA 0.035 30-40% NA NA HCC,PAAD NA NA boxplot RP11-21J18.1 NA chr18 9102736 9254346 + 151611 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-21J18.1 NA 0.929 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-704C2.1 NA chr18 75696079 75712385 - 16307 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-704C2.1 NA 0.012 20-30% Testis 4.906892038 CRC NA NA boxplot RP1-101G11.3 NA chr22 34641179 34651862 + 10684 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-101G11.3 NA 0.024 30-40% NA NA Breast_cancer,PAAD NA NA boxplot RP11-144C15.2 NA chr3 101457241 101457732 - 492 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-144C15.2 NA 0.765 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC114763.1 NA chr2 138470656 138473932 + 3277 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC114763.1 NA 0.012 70-80% NA NA HCC NA NA boxplot RP11-737O24.5 NA chr18 2920966 2921685 + 720 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-737O24.5 NA 0.165 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC018634.9 NA chr7 37821210 37821610 + 401 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC018634.9 NA 0.071 80-90% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot CTD-2616J11.3 NA chr19 51414298 51414965 + 668 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2616J11.3 NA 0.482 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP13-349O20.2 NA chrX 103404777 103408299 + 3523 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP13-349O20.2 NA 0.024 30-40% NA NA Breast_cancer,HCC NA NA boxplot DUX4L51 double homeobox 4 like 51 (pseudogene) chr5 31249879 31250987 + 1109 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DUX4L51 NA 0.035 90-100% NA NA Breast_cancer,Normal,PAAD NA NA boxplot RPSAP58 ribosomal protein SA pseudogene 58 chr19 23827162 23828049 + 888 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPSAP58 NA 1 0-10% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot TRMT112P6 tRNA methyltransferase 11-2 homolog (S. cerevisiae) pseudogene 6 chr2 26028208 26028612 - 405 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TRMT112P6 NA 0.882 30-40% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-502N13.2 NA chr12 14530151 14533229 + 3079 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-502N13.2 NA 0.012 40-50% Testis 4.836263665 CRC,HCC NA NA boxplot LINC01494 long intergenic non-protein coding RNA 1494 chr2 218900811 218930636 - 29826 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01494 NA 0.012 80-90% NA NA Breast_cancer,Normal NA NA boxplot LINC00310 long intergenic non-protein coding RNA 310 chr21 34157724 34190244 + 32521 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00310 NA 0.094 60-70% NA NA CRC,HCC,Normal NA NA boxplot LINC01593 NA chr2 108049200 108052755 - 3556 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01593 NA 0.012 90-100% NA NA Breast_cancer,Normal NA NA boxplot RP11-410N8.3 NA chr20 32561093 32573888 + 12796 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-410N8.3 NA 0.024 50-60% Pituitary 4.035279515 Breast_cancer,CRC,Normal NA NA boxplot AC012613.2 NA chr5 149216523 149276805 - 60283 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC012613.2 NA 0.353 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-476H16.1 NA chr13 20564708 20567045 - 2338 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-476H16.1 NA 0.082 80-90% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CTD-3185P2.1 NA chr15 66488658 66492109 - 3452 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-3185P2.1 NA 0.788 10-20% NA NA CRC,HCC,Normal,PAAD CHD(down) NA boxplot CTC-265F19.2 NA chr19 2610155 2611862 - 1708 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-265F19.2 NA 0.012 50-60% NA NA CRC,PAAD NA NA boxplot AC018359.1 NA chr3 34159334 34562877 + 403544 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC018359.1 exo_circ_054288,exo_circ_043878 0.071 80-90% Testis 4.906892038 HCC,Normal,PAAD NA NA boxplot SNX18P7 sorting nexin 18 pseudogene 7 chr9 33576380 33577014 + 635 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SNX18P7 NA 0.035 0-10% Testis 2.774087263 HCC,PAAD NA NA boxplot AC011516.2 NA chr19 22615557 22623971 - 8415 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC011516.2 NA 0.035 60-70% Brain 2.895097282 Normal NA NA boxplot RPL26P3 ribosomal protein L26 pseudogene 3 chr14 28489910 28490362 + 453 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL26P3 NA 0.012 80-90% NA NA NA NA NA boxplot SLC22A20 solute carrier family 22 member 20 chr11 65213840 65242757 + 28918 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SLC22A20 NA 0.118 40-50% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot CNN2P1 calponin 2 pseudogene 1 chr22 30046276 30047193 - 918 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CNN2P1 NA 0.012 10-20% NA NA Breast_cancer,PAAD NA NA boxplot RP11-1035H13.2 NA chr16 18803083 18812181 + 9099 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1035H13.2 NA 0.247 60-70% Testis 4.906892038 CRC,HCC,Normal,PAAD NA NA boxplot RP5-1108M17.5 NA chr1 103668071 103668268 - 198 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-1108M17.5 NA 0.012 60-70% Pancreas 4.906892038 HCC NA NA boxplot RP11-143H17.1 NA chrX 155137111 155156503 + 19393 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-143H17.1 NA 0.012 90-100% NA NA Breast_cancer,Normal NA NA boxplot AC004510.3 NA chr19 15827045 15835853 - 8809 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC004510.3 NA 0.024 30-40% Testis 4.465720402 HCC NA NA boxplot PAUPAR PAX6 upstream antisense RNA chr11 31826347 31829311 + 2965 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PAUPAR NA 0.012 50-60% NA NA Breast_cancer NA NA boxplot AC004837.3 NA chr7 39609717 39610280 + 564 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC004837.3 NA 0.035 80-90% NA NA CRC,Normal NA NA boxplot Z98941.1 NA chr12 121149010 121149109 + 100 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=Z98941.1 NA 0.012 90-100% NA NA Normal NA NA boxplot CTBP2P8 C-terminal binding protein 2 pseudogene 8 chr1 68161761 68163090 - 1330 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTBP2P8 NA 0.565 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot IMPDH1P10 IMP (inosine monophosphate) dehydrogenase 1 pseudogene 10 chr2 201137516 201140027 - 2512 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=IMPDH1P10 NA 0.388 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot AC016292.1 NA chr17 1181893 1185086 + 3194 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC016292.1 NA 0.012 90-100% Testis 4.589027146 HCC NA NA boxplot ADAM6 ADAM metallopeptidase domain 6 (pseudogene) chr14 105969729 105972269 - 2541 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ADAM6 NA 0.012 40-50% Testis 4.906892038 Breast_cancer,CRC NA NA boxplot RP11-310J24.3 NA chr10 75642476 75643106 + 631 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-310J24.3 exo_circ_013111 0.059 70-80% NA NA Breast_cancer,CRC,Normal,PAAD NA NA boxplot RP4-798A10.4 NA chr1 16520694 16521796 + 1103 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-798A10.4 NA 0.294 80-90% Testis 3.744042477 CRC,HCC,Normal,PAAD NA NA boxplot CEP57L1P1 centrosomal protein 57kDa-like 1 pseudogene 1 chr10 70389426 70390626 + 1201 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CEP57L1P1 NA 0.776 10-20% NA NA CHD,CRC,HCC,Normal,PAAD CHD(down),CRC(down),PAAD(down) NA boxplot RP11-360O19.4 NA chr6 10511036 10514546 - 3511 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-360O19.4 NA 0.012 90-100% Testis 1.85338743 Breast_cancer NA NA boxplot RP11-10H3.1 NA chr8 49168539 49228925 + 60387 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-10H3.1 NA 0.047 80-90% Testis 4.301910269 Breast_cancer,HCC,Normal,PAAD NA NA boxplot CBX1P1 chromobox 1 pseudogene 1 chrX 63299247 63299673 - 427 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CBX1P1 NA 0.4 70-80% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RASSF8-AS1 RASSF8 atnisense RNA 1 chr12 25939329 25959765 - 20437 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RASSF8-AS1 NA 0.353 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD PAAD(up) NA boxplot CTA-797E19.1 NA chr11 70319928 70321415 + 1488 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTA-797E19.1 NA 0.106 10-20% NA NA CRC,HCC,Normal,PAAD NA NA boxplot SOCS2-AS1 SOCS2 antisense RNA 1 chr12 93542463 93571768 - 29306 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SOCS2-AS1 NA 0.788 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-486A14.2 NA chr12 93317135 93377736 - 60602 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-486A14.2 NA 0.235 70-80% NA NA CRC,HCC,Normal,PAAD NA NA boxplot SETP17 SET pseudogene 17 chr11 86294760 86295576 + 817 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SETP17 NA 0.129 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-20B24.7 NA chr17 28892469 28893342 + 874 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-20B24.7 NA 0.012 0-10% NA NA CRC,Normal NA NA boxplot CTD-2184D3.6 NA chr15 52116574 52122131 + 5558 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2184D3.6 NA 0.294 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-20G13.4 NA chr15 99497812 99498375 - 564 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-20G13.4 NA 0.012 70-80% NA NA Breast_cancer,HCC,PAAD NA NA boxplot CTD-2340E1.2 NA chr5 102605635 102606197 + 563 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2340E1.2 NA 0.012 20-30% NA NA HCC NA NA boxplot RP11-561P12.5 NA chr12 8548361 8567613 - 19253 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-561P12.5 NA 0.365 20-30% Whole Blood 3.556627045 CRC,HCC,Normal,PAAD NA NA boxplot HNRNPA1P48 heterogeneous nuclear ribonucleoprotein A1 pseudogene 48 chr16 51645756 51647132 + 1377 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HNRNPA1P48 NA 1 0-10% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-74E22.5 NA chr17 2683305 2685088 - 1784 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-74E22.5 NA 0.318 10-20% NA NA CRC,HCC,Normal,PAAD NA NA boxplot SPATA1 spermatogenesis associated 1 chr1 84506291 84566194 + 59904 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SPATA1 NA 0.706 0-10% NA NA CHD,CRC,HCC,Normal,PAAD CHD(up),HCC(down) NA boxplot RP5-943J3.2 NA chr1 89820174 89820868 - 695 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-943J3.2 NA 0.094 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-16O9.2 NA chr15 41343080 41344225 + 1146 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-16O9.2 NA 0.012 90-100% Brain 4.906892038 NA NA NA boxplot RP11-6O2.4 NA chr15 99128832 99131806 - 2975 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-6O2.4 NA 0.682 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot ZNRF3-AS1 ZNRF3 antisense RNA 1 chr22 29024999 29031476 - 6478 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ZNRF3-AS1 NA 0.235 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-167N24.3 NA chr12 95311312 95442482 - 131171 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-167N24.3 NA 0.012 70-80% Testis 4.385081838 Breast_cancer,PAAD NA NA boxplot RP1-283E3.4 NA chr1 1724512 1737251 + 12740 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-283E3.4 NA 0.294 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CCDC144CP coiled-coil domain containing 144C, pseudogene chr17 20321164 20403557 + 82394 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CCDC144CP NA 0.835 0-10% Testis 1.577140179 Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down),HCC(up),PAAD(up) NA boxplot RP11-314N13.9 NA chr20 1320710 1324367 + 3658 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-314N13.9 NA 0.012 60-70% NA NA Breast_cancer,HCC NA NA boxplot TEKT4P2 tektin 4 pseudogene 2 chr21 9068361 9129752 - 61392 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TEKT4P2 NA 0.941 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up),CRC(down) NA boxplot RPSAP49 ribosomal protein SA pseudogene 49 chr9 88324454 88325339 + 886 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPSAP49 NA 0.012 90-100% NA NA Breast_cancer,HCC NA NA boxplot AC007389.3 NA chr2 65589566 65640177 - 50612 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC007389.3 NA 0.012 30-40% NA NA Breast_cancer,CRC NA NA boxplot RP11-359M6.2 NA chr12 79500119 79500687 - 569 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-359M6.2 NA 0.012 20-30% Lung 4.906892038 NA NA NA boxplot RP11-486I11.2 NA chr16 11797468 11798275 + 808 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-486I11.2 NA 0.282 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-1023L17.2 NA chr5 34190056 34193653 + 3598 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1023L17.2 NA 0.106 90-100% Testis 4.047392205 Breast_cancer,CRC,HCC,PAAD NA NA boxplot RP11-148B18.1 NA chr1 94247866 94334848 + 86983 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-148B18.1 NA 0.059 40-50% Testis 4.906892038 Breast_cancer,HCC,Normal,PAAD NA NA boxplot RP11-184D12.1 NA chr15 35939167 36252257 - 313091 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-184D12.1 NA 0.012 50-60% Testis 4.906892038 HCC NA NA boxplot RP4-680D5.2 NA chr1 15586136 15603626 - 17491 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-680D5.2 NA 0.012 80-90% NA NA Breast_cancer NA NA boxplot CDK2AP2P2 NA chr9 62844818 62845184 + 367 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CDK2AP2P2 NA 0.2 20-30% Spleen 1.649550979 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AP000997.3 NA chr11 115659168 115661417 + 2250 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AP000997.3 NA 0.012 80-90% NA NA Breast_cancer,HCC NA NA boxplot FRG1JP FSHD region gene 1 family member J, pseudogene chr9 63832127 63859641 - 27515 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FRG1JP NA 0.8 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD PAAD(up) NA boxplot LRRC37A6P leucine-rich repeat containing 37 member A6, pseudogene chr10 27246350 27259455 - 13106 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LRRC37A6P NA 0.235 20-30% Testis 1.81636448 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CTC-325H20.8 NA chr19 9383581 9407055 - 23475 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-325H20.8 NA 0.012 70-80% NA NA Breast_cancer,HCC NA NA boxplot RP11-96B5.4 NA chr10 50964270 50965220 + 951 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-96B5.4 NA 0.012 90-100% Testis 4.906892038 Breast_cancer NA NA boxplot AC002059.10 NA chr22 29316744 29317220 - 477 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC002059.10 NA 0.035 90-100% NA NA Breast_cancer,CRC,Normal NA NA boxplot CTB-55O6.12 NA chr19 14137179 14171267 + 34089 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTB-55O6.12 NA 0.929 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),PAAD(down) NA boxplot RP11-822E23.6 NA chr17 21566569 21574517 - 7949 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-822E23.6 NA 0.059 50-60% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot EEF1A1P7 eukaryotic translation elongation factor 1 alpha 1 pseudogene 7 chr19 35382172 35384052 + 1881 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=EEF1A1P7 NA 0.071 80-90% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot BCRP5 breakpoint cluster region pseudogene 5 chr22 20697962 20698934 - 973 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=BCRP5 NA 0.047 90-100% Testis 4.797843037 Breast_cancer,CHD,Normal NA NA boxplot RP11-703G6.1 NA chr4 103961616 104036923 + 75308 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-703G6.1 NA 0.024 90-100% Testis 4.906892038 HCC,PAAD NA NA boxplot RP11-477E3.2 NA chr6 79067692 79068138 - 447 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-477E3.2 NA 0.094 20-30% NA NA CRC,Normal,PAAD NA NA boxplot SLX1B-SULT1A4 SLX1B-SULT1A4 readthrough (NMD candidate) chr16 29455105 29464963 + 9859 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SLX1B-SULT1A4 NA 1 0-10% NA NA CHD,CRC,HCC,Normal,PAAD CHD(up),CRC(up),HCC(up),PAAD(up) NA boxplot RNASEH2B-AS1 RNASEH2B antisense RNA 1 chr13 50862172 50910764 - 48593 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RNASEH2B-AS1 NA 0.424 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-74E24.2 NA chr6 65302522 65304957 + 2436 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-74E24.2 NA 0.918 10-20% NA NA CRC,HCC,Normal,PAAD CHD(down),HCC(up) NA boxplot AC144831.3 NA chr17 83098377 83098987 + 611 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC144831.3 NA 0.176 60-70% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot RP5-881L22.5 NA chr20 44347552 44355185 - 7634 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-881L22.5 NA 0.012 60-70% NA NA PAAD NA NA boxplot RP11-147L13.12 NA chr17 68131462 68131907 + 446 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-147L13.12 NA 0.659 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP3-426I6.5 NA chr1 27773858 27774041 + 184 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-426I6.5 NA 0.047 70-80% NA NA CRC,Normal NA NA boxplot RP11-903H12.3 NA chr14 20693480 20707120 - 13641 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-903H12.3 NA 0.082 30-40% Liver 1.817241679 CRC,HCC,Normal,PAAD NA NA boxplot RP11-314C9.2 NA chr2 38193348 38193629 + 282 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-314C9.2 NA 0.012 90-100% NA NA Normal NA NA boxplot RP11-820K3.2 NA chr12 31534715 31535247 - 533 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-820K3.2 NA 0.012 20-30% NA NA NA NA NA boxplot DHFRP1 dihydrofolate reductase pseudogene 1 chr18 26170726 26171284 - 559 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DHFRP1 NA 0.953 0-10% NA NA CHD,CRC,HCC,Normal,PAAD CHD(up) NA boxplot AC068580.5 NA chr11 1763009 1763749 - 741 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC068580.5 NA 0.082 60-70% NA NA Breast_cancer,CRC,Normal NA NA boxplot RP5-1042K10.10 NA chr22 40372664 40388290 - 15627 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-1042K10.10 NA 0.035 80-90% Testis 3.127773686 CRC,Normal NA NA boxplot RP11-797D24.3 NA chr3 123277353 123277904 + 552 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-797D24.3 NA 0.071 80-90% NA NA CRC,PAAD NA NA boxplot SNHG15 small nucleolar RNA host gene 15 chr7 44983023 44986961 - 3939 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SNHG15 NA 0.965 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot EIF3KP1 eukaryotic translation initiation factor 3 subunit K pseudogene 1 chr5 103032376 103033031 + 656 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=EIF3KP1 NA 0.047 80-90% NA NA Breast_cancer,CRC,Normal,PAAD NA NA boxplot KIF28P kinesin family member 28, pseudogene chr1 246771837 246830059 - 58223 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KIF28P exo_circ_048299 0.965 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down),HCC(down) NA boxplot ZNF90P2 zinc finger protein 90 pseudogene 2 chr6 28888832 28889906 - 1075 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ZNF90P2 NA 0.012 80-90% Testis 4.906892038 PAAD NA NA boxplot RP11-475O6.1 NA chr1 83575776 83861023 - 285248 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-475O6.1 NA 0.106 40-50% Testis 1.764908432 CRC,HCC,Normal,PAAD NA NA boxplot RP11-109G23.3 NA chr4 78773654 78775973 - 2320 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-109G23.3 NA 0.012 60-70% Testis 3.644142802 Breast_cancer,HCC,Normal NA NA boxplot AC074183.4 NA chr7 84939349 84940245 - 897 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC074183.4 NA 0.035 90-100% NA NA HCC,Normal NA NA boxplot RP11-233G1.4 NA chr12 14841092 14844708 + 3617 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-233G1.4 NA 0.035 80-90% Testis 4.906892038 CRC,HCC NA NA boxplot TET2-AS1 TET2 antisense RNA 1 chr4 105171354 105178063 - 6710 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TET2-AS1 NA 0.024 70-80% NA NA CRC,Normal NA NA boxplot RP4-639F20.1 NA chr1 94927566 94963270 + 35705 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-639F20.1 NA 0.565 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),HCC(down) NA boxplot AC003080.4 NA chr7 111971222 111971988 - 767 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC003080.4 NA 0.012 60-70% NA NA NA NA NA boxplot LINC00674 long intergenic non-protein coding RNA 674 chr17 68101908 68115518 + 13611 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00674 NA 1 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up) NA boxplot RP4-809F4.1 NA chr1 174367105 174368039 - 935 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-809F4.1 NA 0.012 70-80% Cervix 4.190208686 CRC NA NA boxplot RP11-514D23.3 NA chr16 86221423 86222729 - 1307 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-514D23.3 NA 0.024 40-50% NA NA HCC,Normal NA NA boxplot RP11-356J5.12 NA chr11 112270749 112362534 + 91786 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-356J5.12 NA 0.506 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC005550.3 NA chr7 15667947 15681980 + 14034 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC005550.3 NA 0.047 10-20% NA NA HCC,PAAD NA NA boxplot RP11-3D4.4 NA chr15 33850538 33851178 - 641 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-3D4.4 NA 0.024 70-80% NA NA CRC NA NA boxplot RP1-28C20.1 NA chr6 145489630 145492092 - 2463 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-28C20.1 NA 0.012 80-90% Testis 4.245501939 Breast_cancer,PAAD NA NA boxplot RP1-65P5.5 NA chr11 32132699 32143579 + 10881 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-65P5.5 NA 0.024 80-90% Testis 4.864477724 Breast_cancer,CRC,PAAD NA NA boxplot RP11-360D2.2 NA chr1 173741674 173741928 + 255 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-360D2.2 NA 0.024 80-90% NA NA CRC NA NA boxplot RP11-191G24.1 NA chr1 51518309 51561629 + 43321 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-191G24.1 exo_circ_047134 0.141 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-74E22.3 NA chr17 2712309 2712833 + 525 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-74E22.3 NA 0.271 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot OR8T1P olfactory receptor family 8 subfamily T member 1 pseudogene chr12 48442030 48442947 - 918 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=OR8T1P NA 0.047 30-40% Testis 1.023703577 Breast_cancer,Normal NA NA boxplot GXYLT1P3 glucoside xylosyltransferase 1 pseudogene 3 chr9 40348599 40349791 + 1193 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GXYLT1P3 NA 0.271 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-45M22.2 NA chr17 17181504 17183257 + 1754 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-45M22.2 NA 0.188 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-393I2.4 NA chr6 87151159 87155285 - 4127 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-393I2.4 NA 0.294 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-1260E13.4 NA chr17 331205 333488 + 2284 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1260E13.4 NA 0.471 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot LINC00266-3 long intergenic non-protein coding RNA 266-3 chr6 131910 144885 - 12976 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00266-3 NA 0.224 70-80% Testis 4.906892038 CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP5-849H19.2 NA chr1 62641122 62641667 - 546 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-849H19.2 NA 0.059 60-70% NA NA HCC,Normal,PAAD NA NA boxplot RP11-449H3.2 NA chr5 146138771 146139008 + 238 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-449H3.2 NA 0.012 80-90% NA NA NA NA NA boxplot PACERR PTGS2 antisense NFKB1 complex-mediated expression regulator RNA chr1 186680622 186681446 + 825 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PACERR NA 0.024 80-90% NA NA Breast_cancer,Normal NA NA boxplot RP5-991G20.6 NA chr16 72772673 72773272 + 600 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-991G20.6 NA 0.012 80-90% NA NA NA NA NA boxplot CTB-158D10.3 NA chr19 46494508 46496502 + 1995 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTB-158D10.3 NA 0.153 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-276E15.4 NA chr9 112748902 112750456 - 1555 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-276E15.4 NA 0.024 80-90% Testis 1.384315426 Normal NA NA boxplot RP11-473M20.5 NA chr16 3032481 3039133 + 6653 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-473M20.5 NA 0.035 90-100% NA NA Breast_cancer,HCC,Normal NA NA boxplot AC083843.1 NA chr8 134792020 134798272 - 6253 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC083843.1 exo_circ_016499,exo_circ_028012,exo_circ_036384,exo_circ_055607,exo_circ_050177 0.259 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD PAAD(up) NA boxplot RP11-762L8.6 NA chr11 86434924 86437282 - 2359 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-762L8.6 NA 0.153 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot ERVMER61-1 endogenous retrovirus group MER61 member 1 chr1 187641226 187643860 + 2635 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ERVMER61-1 NA 0.012 90-100% Testis 4.72577599 NA NA NA boxplot AP003900.6 NA chr21 10328411 10342737 - 14327 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AP003900.6 NA 0.035 0-10% Testis 4.906892038 Breast_cancer,PAAD PAAD(up) NA boxplot HMGB1P24 high mobility group box 1 pseudogene 24 chr17 37143607 37144463 - 857 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HMGB1P24 NA 0.118 10-20% NA NA CRC,HCC,Normal,PAAD NA NA boxplot KB-1732A1.1 NA chr8 102805517 102809971 + 4455 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KB-1732A1.1 NA 0.553 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot EIF4EBP2P1 eukaryotic translation initiation factor 4E binding protein 2 pseudogene 1 chr20 43423196 43423538 - 343 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=EIF4EBP2P1 exo_circ_005689 0.012 40-50% NA NA Normal NA NA boxplot RP11-626G11.6 NA chr16 19111035 19111484 - 450 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-626G11.6 NA 0.047 20-30% NA NA HCC,PAAD NA NA boxplot CTD-3193O13.14 NA chr19 7959123 7960012 + 890 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-3193O13.14 NA 0.118 90-100% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CTD-2378E12.1 NA chr15 50839875 50908599 - 68725 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2378E12.1 NA 0.071 10-20% NA NA Breast_cancer,CRC,Normal,PAAD NA NA boxplot ALG1L8P asparagine-linked glycosylation 1-like 8, pseudogene chr11 67785273 67792335 + 7063 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ALG1L8P NA 0.024 50-60% NA NA Breast_cancer,CHD,Normal,PAAD NA NA boxplot CTC-453G23.4 NA chr19 48145908 48147413 + 1506 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-453G23.4 NA 0.024 90-100% Testis 4.890530991 HCC NA NA boxplot LINC00704 long intergenic non-protein coding RNA 704 chr10 4650185 4678154 - 27970 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00704 NA 0.176 20-30% Spleen 2.040831849 CRC,HCC,Normal,PAAD NA NA boxplot AC090505.5 NA chr3 194755589 194757422 + 1834 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC090505.5 NA 0.024 30-40% Testis 3.406015787 Breast_cancer,PAAD NA NA boxplot DEFT1P defensin, theta 1 pseudogene chr8 6987178 6989721 - 2544 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DEFT1P NA 0.094 50-60% Whole Blood 4.906892038 CHD,CRC,HCC,Normal NA NA boxplot RP5-837I24.1 NA chr1 81501794 81503468 + 1675 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-837I24.1 NA 0.906 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),PAAD(down) NA boxplot LINC00639 long intergenic non-protein coding RNA 639 chr14 38749339 38948273 - 198935 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00639 exo_circ_011053,exo_circ_005141,exo_circ_056949,exo_circ_007527,exo_circ_040050,exo_circ_036539 0.859 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down),CRC(down) NA boxplot CTD-2517M22.16 NA chr8 144463817 144465101 + 1285 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2517M22.16 NA 0.047 70-80% NA NA CRC,Normal NA NA boxplot FLJ42393 uncharacterized LOC401105 chr3 188178543 188180812 + 2270 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FLJ42393 NA 0.129 30-40% NA NA Breast_cancer,CRC,Normal,PAAD NA NA boxplot RP11-815I9.4 NA chr17 18667629 18669461 - 1833 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-815I9.4 NA 0.765 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD PAAD(up) NA boxplot SMIM2-AS1 SMIM2 antisense RNA 1 chr13 44110451 44240517 + 130067 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SMIM2-AS1 NA 0.494 20-30% Testis 1.146561406 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot FCF1P2 FCF1 pseudogene 2 chr3 48290793 48291375 - 583 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FCF1P2 NA 0.847 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down),PAAD(down) NA boxplot ITCH-IT1 ITCH intronic transcript 1 chr20 34450930 34454552 + 3623 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ITCH-IT1 NA 0.071 90-100% NA NA CRC,Normal,PAAD NA NA boxplot KRT8P12 keratin 8 pseudogene 12 chr3 160565447 160569248 + 3802 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KRT8P12 NA 0.894 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot WI2-85898F10.2 NA chr22 45875932 45879247 + 3316 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=WI2-85898F10.2 NA 0.035 70-80% NA NA Breast_cancer,CRC,PAAD NA NA boxplot RP11-793H13.3 NA chr12 53513984 53517608 + 3625 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-793H13.3 NA 0.541 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot CTD-2619J13.9 NA chr19 58357999 58359603 + 1605 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2619J13.9 NA 0.329 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot ALDH1L1-AS1 ALDH1L1 antisense RNA 1 chr3 126103640 126108069 + 4430 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ALDH1L1-AS1 NA 0.012 70-80% NA NA PAAD NA NA boxplot OTUD4P1 OTUD4 pseudogene 1 chr12 3839459 3842525 + 3067 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=OTUD4P1 NA 0.765 40-50% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot JPX JPX transcript, XIST activator (non-protein coding) chrX 73944324 74070408 + 126085 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=JPX NA 0.941 0-10% NA NA CHD,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-390E23.6 NA chr7 123749068 123751166 + 2099 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-390E23.6 NA 0.835 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down),PAAD(up) NA boxplot RP11-138I18.2 NA chr10 11679675 11680514 + 840 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-138I18.2 NA 0.141 10-20% Spleen 2.947479075 CRC,HCC,Normal,PAAD NA NA boxplot RP11-401N16.2 NA chr2 69844509 69844933 - 425 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-401N16.2 NA 0.012 90-100% NA NA Normal NA NA boxplot AC005606.14 NA chr16 1984877 1990357 - 5481 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC005606.14 NA 0.224 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CTC-453G23.8 NA chr19 48204083 48213154 + 9072 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-453G23.8 NA 0.212 60-70% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot LINC00299 long intergenic non-protein coding RNA 299 chr2 8007771 8383621 - 375851 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00299 exo_circ_053945,exo_circ_053941,exo_circ_027374,exo_circ_024893,exo_circ_025216,exo_circ_032886,exo_circ_046722,exo_circ_048823,exo_circ_053944,exo_circ_012746,exo_circ_006072,exo_circ_053942,exo_circ_000878,exo_circ_046723,exo_circ_053943,exo_circ_001756,exo_circ_043645,exo_circ_043644 0.976 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-503C24.4 NA chr6 168242938 168262581 + 19644 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-503C24.4 NA 0.012 70-80% NA NA Breast_cancer,HCC NA NA boxplot CTD-2194A8.2 NA chr16 20440266 20447000 - 6735 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2194A8.2 NA 0.071 10-20% NA NA HCC,Normal,PAAD NA NA boxplot RP11-116O18.3 NA chr18 45669367 45747215 - 77849 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-116O18.3 NA 0.129 10-20% Bladder 3.263381278 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-91A18.4 NA chr1 52033391 52044279 + 10889 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-91A18.4 NA 0.047 50-60% NA NA Normal,PAAD NA NA boxplot RP11-672A2.5 NA chr11 76607853 76630427 - 22575 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-672A2.5 NA 0.918 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot LA16c-390H2.1 NA chr16 3533429 3534258 - 830 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LA16c-390H2.1 NA 0.047 80-90% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-203M5.6 NA chr14 20437982 20441268 + 3287 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-203M5.6 exo_circ_022798 0.365 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RPS3AP14 ribosomal protein S3a pseudogene 14 chr3 125795106 125795885 + 780 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPS3AP14 NA 0.035 60-70% NA NA Normal,PAAD NA NA boxplot RP11-545M17.3 NA chr14 39108342 39108707 + 366 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-545M17.3 NA 0.035 80-90% NA NA Normal,PAAD NA NA boxplot RP11-730A19.7 NA chr10 13159477 13159777 - 301 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-730A19.7 NA 0.012 90-100% NA NA Normal NA NA boxplot RP11-573G6.10 NA chr10 22340377 22340615 - 239 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-573G6.10 NA 0.024 60-70% NA NA Normal NA NA boxplot RP11-779O18.1 NA chr5 172758226 172762556 + 4331 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-779O18.1 NA 0.012 80-90% Testis 3.614061583 Breast_cancer NA NA boxplot RP4-551E13.2 NA chrX 44466691 44468955 + 2265 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-551E13.2 NA 0.012 10-20% NA NA Breast_cancer,Normal NA NA boxplot RP11-773H22.4 NA chr18 12984694 12991173 - 6480 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-773H22.4 NA 0.353 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot LINC00976 long intergenic non-protein coding RNA 976 chr8 128904773 128966001 - 61229 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00976 NA 0.035 50-60% NA NA Breast_cancer,CRC,Normal NA NA boxplot RP11-186B7.7 NA chr17 7557820 7558245 - 426 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-186B7.7 NA 0.106 80-90% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC003005.2 NA chr19 57477649 57482996 + 5348 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC003005.2 NA 0.024 30-40% Testis 2.068195611 Normal,PAAD NA NA boxplot RP3-521E19.2 NA chr12 112256800 112259091 + 2292 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-521E19.2 NA 0.012 80-90% Brain 4.906892038 HCC NA NA boxplot RP11-532F6.3 NA chr6 708592 711405 - 2814 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-532F6.3 NA 0.624 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot LINC00836 long intergenic non-protein coding RNA 836 chr10 25651712 25732935 + 81224 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00836 NA 0.012 10-20% NA NA Breast_cancer,CRC NA NA boxplot RP11-16E23.3 NA chr15 65766460 65767398 - 939 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-16E23.3 NA 0.071 80-90% NA NA CRC,HCC,Normal NA NA boxplot RP11-352G9.1 NA chr3 195913078 195913683 - 606 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-352G9.1 NA 0.047 80-90% NA NA Normal NA NA boxplot RPS17P2 ribosomal protein S17 pseudogene 2 chr5 116716243 116716650 + 408 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPS17P2 NA 0.012 80-90% NA NA NA NA NA boxplot LINC00400 long intergenic non-protein coding RNA 400 chr13 43158631 43159466 + 836 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00400 NA 0.024 30-40% Adrenal Gland 4.302593989 HCC,PAAD NA NA boxplot RP11-143E21.3 NA chr12 130138693 130140768 + 2076 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-143E21.3 NA 0.059 10-20% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot AKT3-IT1 AKT3 intronic transcript 1 chr1 243793205 243794400 - 1196 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AKT3-IT1 exo_circ_038037 0.082 60-70% NA NA CRC,Normal NA NA boxplot RP11-375O18.2 NA chr9 79505804 79532342 - 26539 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-375O18.2 NA 0.024 10-20% Testis 4.792663764 CRC,Normal NA Yes boxplot OR4A13P olfactory receptor family 4 subfamily A member 13 pseudogene chr11 55466771 55467712 + 942 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=OR4A13P NA 0.012 50-60% NA NA Normal NA NA boxplot RP11-381N20.2 NA chr4 123490268 123522106 + 31839 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-381N20.2 NA 0.024 90-100% Testis 4.513945909 CRC,PAAD NA NA boxplot ADAMTS9-AS1 ADAMTS9 antisense RNA 1 chr3 64561322 64592757 + 31436 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ADAMTS9-AS1 NA 0.118 70-80% Kidney 1.371872218 Breast_cancer,CRC,HCC,Normal NA NA boxplot AC006033.22 NA chr7 38311383 38311808 + 426 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC006033.22 NA 0.071 60-70% NA NA Breast_cancer,CRC,Normal NA NA boxplot RP11-20B7.1 NA chr3 73808601 73902866 + 94266 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-20B7.1 NA 0.012 30-40% NA NA HCC NA NA boxplot RP11-513M16.7 NA chr9 19371386 19371945 - 560 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-513M16.7 NA 0.259 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CTD-2017C7.1 NA chr14 101833435 101839531 - 6097 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2017C7.1 NA 0.012 90-100% NA NA Breast_cancer,Normal NA NA boxplot FAM204BP family with sequence similarity 204, member B, pseudogene chr1 197746751 197747451 - 701 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FAM204BP NA 0.106 60-70% NA NA Breast_cancer,CHD,CRC,HCC,Normal NA NA boxplot RP11-161H23.10 NA chr12 49389516 49390162 + 647 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-161H23.10 NA 0.212 10-20% NA NA CRC,HCC,Normal,PAAD PAAD(up) NA boxplot RP11-22B23.2 NA chr12 9314402 9316173 - 1772 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-22B23.2 NA 0.024 80-90% NA NA Breast_cancer,Normal NA NA boxplot CTD-2206N4.4 NA chr17 39057019 39113190 + 56172 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2206N4.4 NA 0.071 70-80% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot ANO1-AS1 ANO1 antisense RNA 1 chr11 70187788 70188509 - 722 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ANO1-AS1 NA 0.047 60-70% NA NA HCC,Normal NA NA boxplot HMGN2P3 high mobility group nucleosomal binding domain 2 pseudogene 3 chr16 26032539 26032811 - 273 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HMGN2P3 NA 1 0-10% NA NA CHD,CRC,HCC,Normal,PAAD CRC(down) NA boxplot RP11-20B24.5 NA chr17 28926275 28944749 + 18475 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-20B24.5 NA 0.082 80-90% Testis 1.102389407 CRC,Normal,PAAD NA NA boxplot CTD-2547G23.4 NA chr16 25257952 25261066 + 3115 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2547G23.4 NA 0.176 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-72I8.1 NA chr16 15094411 15109197 + 14787 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-72I8.1 NA 0.318 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP3-395C13.1 NA chr6 157372556 157373171 - 616 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-395C13.1 NA 0.012 70-80% NA NA NA NA NA boxplot RP11-20P5.2 NA chr9 28148211 28149236 + 1026 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-20P5.2 NA 0.012 90-100% Testis 4.906892038 Breast_cancer,HCC NA NA boxplot RP11-861E21.2 NA chr18 12438890 12448205 + 9316 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-861E21.2 NA 0.071 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-140H17.2 NA chr16 69632141 69632571 + 431 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-140H17.2 NA 0.059 40-50% NA NA CRC,HCC,Normal NA NA boxplot MIR2052HG MIR2052 host gene chr8 74599775 74823313 + 223539 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MIR2052HG NA 0.071 20-30% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot UQCRBP1 ubiquinol-cytochrome c reductase binding protein pseudogene 1 chrX 56737242 56737577 - 336 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=UQCRBP1 NA 0.506 70-80% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-61A14.1 NA chr16 66841433 66853448 - 12016 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-61A14.1 NA 0.294 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot EML2-AS1 EML2 antisense RNA 1 chr19 45641494 45642840 + 1347 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=EML2-AS1 NA 0.576 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot GNAS-AS1 GNAS antisense RNA 1 chr20 58818919 58850903 - 31985 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GNAS-AS1 NA 0.094 50-60% Testis 1.023236188 CHD,CRC,HCC,Normal NA NA boxplot RP11-626G11.4 NA chr16 19086856 19098110 + 11255 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-626G11.4 NA 0.094 30-40% NA NA HCC,Normal,PAAD NA NA boxplot CTB-58E17.3 NA chr17 38703480 38706261 - 2782 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTB-58E17.3 NA 0.165 70-80% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-498D10.8 NA chr16 72004239 72004803 - 565 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-498D10.8 NA 0.035 60-70% NA NA CRC,HCC,Normal NA NA boxplot RP11-85A1.3 NA chr10 99621055 99621918 + 864 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-85A1.3 NA 0.071 60-70% Testis 1.560872176 Breast_cancer,CRC,Normal NA NA boxplot MRPL42P4 mitochondrial ribosomal protein L42 pseudogene 4 chr7 47026128 47026570 - 443 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MRPL42P4 NA 0.012 90-100% NA NA HCC NA NA boxplot AP000438.2 NA chr11 62909546 62918361 + 8816 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AP000438.2 NA 0.059 50-60% NA NA Breast_cancer,CRC,Normal,PAAD NA NA boxplot RP11-407G23.5 NA chr16 57142652 57144936 + 2285 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-407G23.5 NA 0.094 70-80% NA NA Breast_cancer,CRC,Normal,PAAD NA NA boxplot MTATP6P1 mitochondrially encoded ATP synthase 6 pseudogene 1 chr1 633696 634376 + 681 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MTATP6P1 NA 0.929 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot COX6CP17 cytochrome c oxidase subunit VIc pseudogene 17 chr10 7295106 7295290 - 185 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=COX6CP17 NA 0.082 20-30% NA NA CRC,Normal,PAAD NA NA boxplot CTD-2162K18.3 NA chr19 36773712 36775908 - 2197 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2162K18.3 exo_circ_042906,exo_circ_040576 0.035 60-70% Testis 2.819732485 HCC,Normal NA NA boxplot RPL12P15 ribosomal protein L12 pseudogene 15 chr2 121658475 121658973 - 499 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL12P15 NA 0.012 70-80% NA NA NA NA NA boxplot RP11-203J24.9 NA chr9 127867864 127886787 - 18924 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-203J24.9 NA 0.929 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-480C16.1 NA chr2 113432600 113436042 + 3443 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-480C16.1 NA 0.024 70-80% NA NA Breast_cancer,PAAD NA NA boxplot YBX1P3 Y-box binding protein 1 pseudogene 3 chr3 114930541 114931449 + 909 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=YBX1P3 NA 0.012 90-100% Skin 4.15739336 Breast_cancer,PAAD NA NA boxplot AC005189.6 NA chr7 43767290 43767599 + 310 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC005189.6 NA 0.012 60-70% Spleen 2.13087739 CRC NA NA boxplot RP4-550H1.4 NA chr20 36072441 36085260 + 12820 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-550H1.4 NA 0.035 90-100% Testis 4.542479231 Breast_cancer,HCC,Normal,PAAD NA NA boxplot RP11-848P1.9 NA chr17 31008497 31093127 + 84631 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-848P1.9 NA 0.753 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),PAAD(up) NA boxplot TMBIM7P NA chr7 92412976 92439562 - 26587 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TMBIM7P NA 0.024 50-60% NA NA Breast_cancer,Normal NA NA boxplot RP11-442J21.2 NA chr13 44684487 44715393 - 30907 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-442J21.2 NA 0.024 60-70% NA NA CRC,PAAD NA NA boxplot FTH1P21 ferritin, heavy polypeptide 1 pseudogene 21 chr4 156006478 156006988 + 511 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FTH1P21 NA 0.059 20-30% NA NA HCC,Normal,PAAD NA NA boxplot RP11-538P18.1 NA chr3 158496561 158496934 + 374 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-538P18.1 NA 0.035 60-70% NA NA Normal NA NA boxplot RP11-509J21.4 NA chr9 3684076 3689626 - 5551 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-509J21.4 NA 0.035 90-100% NA NA Breast_cancer,CRC,PAAD NA NA boxplot CTD-2256P15.4 NA chr5 10264597 10267146 - 2550 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2256P15.4 NA 0.329 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot RP11-269C23.5 NA chr13 44369365 44369877 - 513 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-269C23.5 NA 0.024 90-100% NA NA PAAD NA NA boxplot CTD-2576D5.4 NA chr16 17134504 17138736 + 4233 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2576D5.4 NA 0.271 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot KB-68A7.1 NA chr21 44477850 44478493 + 644 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KB-68A7.1 NA 0.094 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-49I4.3 NA chr3 101823793 101824998 - 1206 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-49I4.3 NA 0.059 60-70% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot RP11-154H17.1 NA chr1 5561709 5668295 - 106587 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-154H17.1 NA 0.059 60-70% NA NA CRC,HCC,Normal NA NA boxplot RP11-47L3.1 NA chr17 35313502 35324900 + 11399 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-47L3.1 NA 0.894 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down),PAAD(up) NA boxplot RP3-449M8.9 NA chr14 74471930 74472360 - 431 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-449M8.9 NA 0.012 40-50% NA NA Normal NA NA boxplot RP11-1042B17.1 NA chr14 60572024 60572311 - 288 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1042B17.1 NA 0.012 60-70% NA NA NA NA NA boxplot RP11-358N2.2 NA chr20 32355053 32355734 + 682 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-358N2.2 NA 0.012 10-20% NA NA NA NA NA boxplot RP11-856F16.2 NA chr11 94874052 94925521 - 51470 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-856F16.2 NA 0.153 10-20% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CTD-2583A14.11 NA chr19 57867885 57868834 + 950 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2583A14.11 NA 0.471 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-325P15.1 NA chr1 147050817 147052481 + 1665 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-325P15.1 NA 0.012 90-100% Liver 2.136329566 Breast_cancer,Normal NA NA boxplot RPL7AP6 ribosomal protein L7a pseudogene 6 chr14 69885340 69886140 - 801 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL7AP6 NA 1 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CRC(down) NA boxplot CTD-3018O17.5 NA chr19 52392659 52392755 + 97 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-3018O17.5 NA 0.188 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot LINC01618 long intergenic non-protein coding RNA 1618 chr4 52789994 52815464 + 25471 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01618 NA 0.012 0-10% NA NA HCC,Normal NA NA boxplot RP11-379K17.12 NA chr3 170087810 170089590 + 1781 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-379K17.12 NA 0.447 10-20% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot RP6-109B7.4 NA chr22 46067356 46069891 - 2536 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP6-109B7.4 NA 0.106 20-30% NA NA CRC,HCC,Normal NA NA boxplot ANKRD20A7P ankyrin repeat domain 20 family member A7, pseudogene chr9 42852675 42894751 + 42077 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ANKRD20A7P NA 0.318 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-122G18.7 NA chr1 161406068 161407082 + 1015 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-122G18.7 NA 0.059 70-80% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot CTD-2535I10.1 NA chr16 7888489 7894395 - 5907 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2535I10.1 NA 0.035 10-20% NA NA CRC,PAAD NA NA boxplot RP11-108K14.12 NA chr10 133526259 133527513 - 1255 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-108K14.12 NA 0.012 80-90% NA NA HCC,Normal,PAAD NA NA boxplot RP13-122B23.8 NA chr9 137293868 137295721 - 1854 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP13-122B23.8 NA 0.059 70-80% NA NA Breast_cancer,HCC,Normal NA NA boxplot RP11-734K2.4 NA chr12 89525654 89548005 + 22352 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-734K2.4 NA 0.659 10-20% Testis 1.575059043 Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot CTD-2574D22.4 NA chr16 29919634 29921905 - 2272 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2574D22.4 NA 0.271 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot MYCBP2-AS2 MYCBP2 antisense RNA 2 chr13 77080511 77081190 - 680 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MYCBP2-AS2 NA 0.059 80-90% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot OR9A3P olfactory receptor family 9 subfamily A member 3 pseudogene chr7 141862860 141863737 + 878 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=OR9A3P NA 0.012 90-100% NA NA Normal NA NA boxplot RP11-120K9.2 NA chr15 50557601 50560500 + 2900 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-120K9.2 NA 0.059 90-100% NA NA Normal NA NA boxplot RP11-326C3.11 NA chr11 318640 325631 + 6992 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-326C3.11 NA 0.741 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-89K21.1 NA chr2 44921077 44939199 - 18123 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-89K21.1 NA 0.024 40-50% Pituitary 3.736765488 Breast_cancer,HCC NA NA boxplot GLIS2-AS1 GLIS2 antisense RNA 1 chr16 4324667 4328340 - 3674 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GLIS2-AS1 NA 0.059 80-90% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC068134.8 NA chr2 232379635 232381674 - 2040 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC068134.8 NA 0.024 50-60% NA NA PAAD NA NA boxplot BCAS2P1 breast carcinoma amplified sequence 2 pseudogene 1 chr11 83132056 83134737 + 2682 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=BCAS2P1 NA 0.082 60-70% Prostate 3.992295922 CRC,Normal,PAAD NA NA boxplot UQCRHP3 ubiquinol-cytochrome c reductase hinge protein pseudogene 3 chr10 43732334 43732584 + 251 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=UQCRHP3 NA 0.024 70-80% NA NA Normal NA NA boxplot AC107083.1 NA chr2 62507545 62507823 - 279 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC107083.1 NA 0.082 70-80% Nerve 4.906892038 CRC,Normal NA NA boxplot MRPL42P2 mitochondrial ribosomal protein L42 pseudogene 2 chr6 16171606 16172031 + 426 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MRPL42P2 NA 0.012 30-40% Spleen 4.023589968 HCC NA NA boxplot ADGRF5P2 adhesion G protein-coupled receptor F5 pseudogene 2 chr9 42795392 42800672 + 5281 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ADGRF5P2 NA 0.012 60-70% NA NA HCC NA NA boxplot RP11-218L14.4 NA chrX 155468286 155487046 + 18761 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-218L14.4 NA 0.447 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot HMGB1P30 high mobility group box 1 pseudogene 30 chr3 148824782 148825387 - 606 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HMGB1P30 exo_circ_054125 0.059 20-30% Spleen 4.906892038 CHD,CRC,HCC NA NA boxplot EPHA5-AS1 EPHA5 antisense RNA 1 chr4 65669961 65698029 + 28069 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=EPHA5-AS1 NA 0.024 30-40% NA NA Breast_cancer,HCC NA NA boxplot RP11-364P2.2 NA chr4 121369433 121370345 - 913 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-364P2.2 NA 0.024 90-100% Testis 4.906892038 Breast_cancer,HCC NA NA boxplot MTND4P26 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 pseudogene 26 chr2 120213631 120214989 + 1359 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MTND4P26 NA 0.012 90-100% NA NA PAAD NA NA boxplot MGC45922 uncharacterized LOC284365 chr19 50808874 50818880 + 10007 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MGC45922 NA 0.059 60-70% NA NA Breast_cancer,HCC,Normal NA NA boxplot UPF3AP2 UPF3A pseudogene 2 chr17 20375369 20376840 - 1472 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=UPF3AP2 NA 0.988 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down) NA boxplot GDI2P2 GDP dissociation inhibitor 2 pseudogene 2 chr1 72274552 72275159 + 608 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GDI2P2 NA 0.694 70-80% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-80H5.9 NA chr10 89667181 89699671 - 32491 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-80H5.9 NA 0.059 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot HMGB1P11 high mobility group box 1 pseudogene 11 chr1 171270954 171271590 - 637 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HMGB1P11 NA 0.012 70-80% NA NA NA NA NA boxplot RP11-800A3.3 NA chr11 73176694 73181696 + 5003 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-800A3.3 NA 0.012 0-10% NA NA Normal NA NA boxplot PIN4P1 protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 pseudogene 1 chr15 43875849 43876244 - 396 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PIN4P1 NA 0.482 60-70% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot CTD-2536I1.2 NA chr15 95280753 95284249 - 3497 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2536I1.2 NA 0.094 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot SPIN4-AS1 SPIN4 antisense RNA 1 chrX 63349646 63352178 + 2533 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SPIN4-AS1 NA 0.047 80-90% NA NA CRC,HCC,Normal NA NA boxplot RNF126P1 ring finger protein 126 pseudogene 1 chr17 57045478 57046797 + 1320 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RNF126P1 NA 0.012 20-30% Testis 3.857093272 Breast_cancer,Normal NA NA boxplot AK2P2 adenylate kinase 2 pseudogene 2 chr2 31823413 31823817 - 405 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AK2P2 NA 0.024 90-100% Testis 4.906892038 HCC,Normal NA NA boxplot SIGLEC27P sialic acid binding Ig-like lectin 27, pseudogene chr19 51508573 51509311 + 739 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SIGLEC27P NA 0.106 70-80% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-78J21.4 NA chr13 52488993 52499305 + 10313 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-78J21.4 NA 0.024 70-80% Testis 4.906892038 PAAD NA NA boxplot AC005154.7 NA chr7 30523143 30524535 - 1393 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC005154.7 NA 0.235 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP1-202O8.3 NA chr1 6393555 6394391 + 837 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-202O8.3 NA 0.141 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot OR7E125P olfactory receptor family 7 subfamily E member 125 pseudogene chr8 7246726 7247571 - 846 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=OR7E125P NA 0.012 90-100% NA NA CRC NA NA boxplot RP11-800A3.2 NA chr11 73214998 73215913 - 916 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-800A3.2 exo_circ_056403 0.012 60-70% Thyroid 1.429896732 Normal NA NA boxplot RP11-64C12.8 NA chr18 12288308 12291488 + 3181 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-64C12.8 NA 0.118 50-60% Heart 1.021299246 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-751K21.1 NA chr7 135650972 135651416 + 445 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-751K21.1 NA 0.059 30-40% NA NA CRC,Normal NA NA boxplot RP11-1100L3.8 NA chr12 52058459 52059503 - 1045 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1100L3.8 NA 0.259 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot LINC00538 long intergenic non-protein coding RNA 538 chr1 213924749 213926654 - 1906 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00538 NA 0.012 60-70% NA NA PAAD NA NA boxplot PMS2P4 PMS1 homolog 2, mismatch repair system component pseudogene 4 chr7 67295608 67302907 - 7300 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PMS2P4 NA 0.953 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-456O19.2 NA chr18 56042135 56096319 + 54185 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-456O19.2 NA 0.024 0-10% Testis 4.12091795 Breast_cancer,Normal,PAAD NA NA boxplot RP11-451B8.1 NA chr3 87731402 87793629 - 62228 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-451B8.1 exo_circ_035236,exo_circ_035350 0.012 40-50% Pituitary 3.989910793 Normal NA NA boxplot RP1-63M2.7 NA chr20 33655701 33656423 - 723 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-63M2.7 NA 0.024 20-30% NA NA Breast_cancer,PAAD NA NA boxplot RP1-102E24.8 NA chr12 6393905 6396148 + 2244 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-102E24.8 NA 0.176 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-140C5.3 NA chr10 49551308 49552652 + 1345 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-140C5.3 NA 0.012 0-10% NA NA PAAD NA NA boxplot RP11-266K22.2 NA chr1 31333067 31346799 - 13733 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-266K22.2 NA 0.235 50-60% Cervix 4.906892038 CRC,HCC,Normal,PAAD NA NA boxplot RP11-10A14.5 NA chr8 9189011 9202854 + 13844 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-10A14.5 NA 0.247 0-10% Testis 2.969292985 CRC,HCC,Normal,PAAD HCC(up),PAAD(up) NA boxplot LINC00682 long intergenic non-protein coding RNA 682 chr4 41872747 41882955 - 10209 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00682 NA 0.012 20-30% Colon 3.197113672 Breast_cancer,Normal NA NA boxplot HMGB1P19 high mobility group box 1 pseudogene 19 chr8 123123106 123123682 + 577 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HMGB1P19 NA 0.2 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CTD-2001C12.1 NA chr5 100449754 100535262 - 85509 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2001C12.1 NA 0.094 60-70% Testis 4.151968179 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot LINC01124 long intergenic non-protein coding RNA 1124 chr2 170712451 170714567 - 2117 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01124 NA 0.035 40-50% NA NA Breast_cancer,HCC,PAAD NA NA boxplot AC008834.1 NA chr5 98086260 98161193 - 74934 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC008834.1 NA 0.012 80-90% Testis 4.906892038 NA NA NA boxplot PPP1R14BP2 protein phosphatase 1 regulatory inhibitor subunit 14B pseudogene 2 chr2 207681590 207682033 + 444 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PPP1R14BP2 NA 0.341 70-80% Testis 4.429556919 CRC,HCC,Normal,PAAD NA NA boxplot RP11-303E16.6 NA chr16 81069854 81076598 + 6745 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-303E16.6 NA 0.059 50-60% NA NA CRC,HCC,Normal NA NA boxplot RP11-461F11.2 NA chr15 97533738 97541476 - 7739 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-461F11.2 NA 0.012 40-50% NA NA Breast_cancer NA NA boxplot RP5-894D12.5 NA chr6 170266669 170276762 - 10094 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-894D12.5 NA 0.141 40-50% Pancreas 2.425325446 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP3-325F22.5 NA chr6 136550661 136552554 + 1894 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-325F22.5 NA 0.035 40-50% NA NA Breast_cancer,HCC,PAAD NA NA boxplot CTD-2007L18.5 NA chr11 68612899 68616711 - 3813 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2007L18.5 NA 0.2 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-46A10.2 NA chr1 180906651 180909166 + 2516 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-46A10.2 NA 0.035 80-90% Testis 2.111664547 Breast_cancer,CRC,Normal NA NA boxplot RP11-657O9.1 NA chr3 135356067 135439888 - 83822 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-657O9.1 NA 0.106 40-50% Spleen 3.176771959 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-75L1.6 NA chr12 9817350 9818025 - 676 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-75L1.6 NA 0.035 80-90% Testis 4.906892038 Normal,PAAD NA NA boxplot RP11-488C13.7 NA chr14 76778952 76782249 + 3298 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-488C13.7 NA 0.824 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(up),HCC(up),PAAD(up) NA boxplot RP11-354K1.2 NA chr1 211635906 211642867 - 6962 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-354K1.2 NA 0.012 90-100% Adrenal Gland 3.002643625 NA NA NA boxplot RP11-154D17.1 NA chr9 81689713 81776900 + 87188 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-154D17.1 NA 0.141 30-40% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot DUTP1 deoxyuridine triphosphatase pseudogene 1 chr3 125310881 125311350 + 470 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DUTP1 NA 0.012 40-50% NA NA Normal NA NA boxplot RP11-104G3.2 NA chr9 39809562 39810019 + 458 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-104G3.2 NA 0.247 60-70% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot RP11-314A15.2 NA chrX 65821255 65822249 - 995 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-314A15.2 NA 0.047 90-100% Skin 4.906892038 CRC,Normal NA NA boxplot RP11-423E7.1 NA chr3 172225428 172225872 - 445 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-423E7.1 NA 0.012 90-100% NA NA CRC NA NA boxplot RP11-127L20.3 NA chr10 104323369 104327004 + 3636 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-127L20.3 NA 0.035 70-80% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot RP11-146N23.1 NA chr9 19200335 19201046 - 712 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-146N23.1 NA 0.859 10-20% NA NA CRC,HCC,Normal,PAAD CRC(up),HCC(up),PAAD(up) NA boxplot LINC00958 long intergenic non-protein coding RNA 958 chr11 12961842 12989548 - 27707 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00958 NA 0.118 0-10% NA NA Breast_cancer,CHD,CRC,HCC,PAAD PAAD(up) NA boxplot KRT18P23 keratin 18 pseudogene 23 chr22 44566965 44568247 + 1283 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KRT18P23 NA 0.012 70-80% NA NA Breast_cancer NA NA boxplot TUSC7 tumor suppressor candidate 7 (non-protein coding) chr3 116716460 116716624 + 165 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TUSC7 NA 0.012 70-80% Testis 4.879743127 Breast_cancer,HCC NA NA boxplot RPSAP41 ribosomal protein SA pseudogene 41 chr6 73290403 73291262 + 860 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPSAP41 NA 0.282 50-60% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-375I20.6 NA chr3 134347288 134349233 - 1946 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-375I20.6 NA 0.047 10-20% NA NA PAAD NA NA boxplot RP11-158H5.8 NA chr18 35268218 35270238 + 2021 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-158H5.8 NA 0.106 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CTD-2007H13.1 NA chr5 98954394 98954972 + 579 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2007H13.1 NA 0.035 70-80% NA NA CRC,PAAD NA NA boxplot RP11-333J10.3 NA chr17 36998598 37000034 + 1437 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-333J10.3 NA 0.129 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-53B2.2 NA chr18 13486462 13490676 + 4215 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-53B2.2 exo_circ_017288,exo_circ_017289,exo_circ_014733 0.282 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot SDHAP1 succinate dehydrogenase complex subunit A, flavoprotein pseudogene 1 chr3 195959748 195990318 - 30571 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SDHAP1 NA 0.988 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RPL12P19 ribosomal protein L12 pseudogene 19 chr2 44270621 44271106 + 486 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL12P19 NA 0.012 90-100% NA NA Breast_cancer,Normal NA NA boxplot RP11-844P9.2 NA chr5 176143450 176156989 - 13540 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-844P9.2 NA 0.047 60-70% Testis 2.790328935 Breast_cancer,CRC,HCC NA NA boxplot RP11-295M3.2 NA chr16 53168522 53169450 + 929 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-295M3.2 NA 0.059 80-90% NA NA CRC,Normal NA NA boxplot RP11-355I22.2 NA chr14 62103378 62117175 - 13798 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-355I22.2 NA 0.024 90-100% Testis 3.365271827 HCC NA NA boxplot RP11-494K3.2 NA chr1 204946608 204947169 + 562 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-494K3.2 NA 0.012 90-100% NA NA NA NA NA boxplot PITRM1-AS1 PITRM1 antisense RNA 1 chr10 3141632 3167972 + 26341 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PITRM1-AS1 NA 0.353 30-40% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-72B4.2 NA chr9 95918136 95918704 + 569 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-72B4.2 NA 0.071 80-90% Testis 3.882058538 CRC,Normal NA NA boxplot RP11-480I12.2 NA chr1 202767229 202767418 - 190 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-480I12.2 NA 0.388 80-90% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CTD-2270P14.2 NA chr16 2683106 2684764 + 1659 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2270P14.2 NA 0.094 70-80% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-144A16.3 NA chr9 60929927 60930407 + 481 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-144A16.3 NA 0.024 70-80% NA NA HCC NA NA boxplot TCEB3-AS1 TCEB3 antisense RNA 1 chr1 23760382 23778287 - 17906 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TCEB3-AS1 NA 0.776 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot RP4-669P10.19 NA chr22 42132543 42132998 + 456 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-669P10.19 NA 0.035 70-80% NA NA CRC,Normal NA NA boxplot CTC-336P14.1 NA chr2 32013061 32013368 + 308 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-336P14.1 NA 0.047 10-20% NA NA HCC,Normal,PAAD NA NA boxplot FAM58DP family with sequence similarity 58, member A pseudogene chr13 19382454 19383072 + 619 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FAM58DP NA 0.2 80-90% Testis 3.679066281 Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP4-800J21.3 NA chr20 57384160 57393062 - 8903 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-800J21.3 NA 0.8 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),HCC(down) NA boxplot AC016700.2 NA chr2 70089721 70096100 + 6380 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC016700.2 NA 0.012 10-20% Testis 4.741982362 CRC NA NA boxplot RP11-296L22.8 NA chr9 34521527 34524241 + 2715 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-296L22.8 NA 0.035 70-80% Testis 4.208985201 Breast_cancer,CRC,Normal NA NA boxplot RP11-345P4.6 NA chr1 1671990 1674397 + 2408 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-345P4.6 NA 0.106 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-527N22.1 NA chr8 37326575 37331984 - 5410 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-527N22.1 NA 0.024 0-10% NA NA Breast_cancer,PAAD PAAD(up) NA boxplot DTX2P1-UPK3BP1-PMS2P11 DTX2P1-UPK3BP1-PMS2P11 readthrough transcribed pseudogene chr7 76959835 77043775 + 83941 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DTX2P1-UPK3BP1-PMS2P11 NA 0.976 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up),CRC(up),PAAD(up) NA boxplot FAM187B2P family with sequence similarity 187, member B pseudogene chr19 35232291 35233003 - 713 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FAM187B2P NA 0.494 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot CASC11 cancer susceptibility candidate 11 (non-protein coding) chr8 127686343 127733967 - 47625 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CASC11 NA 0.094 20-30% NA NA Breast_cancer,CRC,HCC,PAAD NA NA boxplot RP11-333O1.1 NA chr2 12715415 12716227 + 813 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-333O1.1 exo_circ_032691 0.071 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-166N17.1 NA chr10 32266289 32269474 + 3186 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-166N17.1 NA 0.094 30-40% NA NA HCC,Normal,PAAD NA NA boxplot RP11-557H15.4 NA chr6 134525314 134659836 - 134523 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-557H15.4 exo_circ_038973 0.247 30-40% Heart 1.511320375 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-285F7.2 NA chr1 225840883 225846522 - 5640 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-285F7.2 NA 0.306 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP5-1042K10.13 NA chr22 40415003 40415445 + 443 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-1042K10.13 NA 0.024 80-90% NA NA Breast_cancer,CRC NA NA boxplot CTD-2005H7.2 NA chr11 86727355 86765265 + 37911 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2005H7.2 NA 0.024 40-50% NA NA PAAD NA NA boxplot CH17-76K2.6 NA chr1 206541758 206544892 + 3135 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CH17-76K2.6 NA 0.024 80-90% NA NA Breast_cancer,CRC NA NA boxplot AC005614.3 NA chr19 40090754 40094406 + 3653 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC005614.3 NA 0.035 90-100% Testis 4.55777883 Breast_cancer,Normal,PAAD NA NA boxplot AC005077.14 NA chr7 76071469 76074963 - 3495 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC005077.14 NA 0.094 40-50% NA NA Breast_cancer,CRC,Normal,PAAD NA NA boxplot KCNQ5-IT1 KCNQ5 intronic transcript 1 chr6 72630495 72678558 + 48064 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KCNQ5-IT1 exo_circ_031076 0.329 30-40% Testis 4.88294554 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-214K3.19 NA chr12 123969990 123970344 - 355 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-214K3.19 NA 0.141 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot AC003092.1 NA chr7 94022833 94066661 + 43829 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC003092.1 NA 0.071 40-50% NA NA CRC,HCC,Normal NA NA boxplot SUMO2P1 SUMO2 pseudogene 1 chr6 29636060 29636343 - 284 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SUMO2P1 NA 1 0-10% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot THCAT158 thyroid cancer-associated transcript 158 chr17 47303460 47323613 - 20154 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=THCAT158 NA 0.071 30-40% NA NA HCC,Normal NA NA boxplot RP11-982M15.6 NA chr14 104681146 104684932 + 3787 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-982M15.6 NA 0.776 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(up) NA boxplot CLCN3P1 chloride channel, voltage-sensitive 3 pseudogene 1 chr9 14987302 15146401 - 159100 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CLCN3P1 NA 0.447 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CTD-2017F17.1 NA chr15 64943240 64943672 - 433 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2017F17.1 NA 0.012 70-80% NA NA HCC NA NA boxplot RP11-989F5.4 NA chr12 130775694 130776546 - 853 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-989F5.4 exo_circ_056553 0.012 70-80% NA NA Breast_cancer NA NA boxplot FAM90A12P Putative protein FAM90A12 chr8 8027077 8032305 - 5229 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FAM90A12P NA 0.012 70-80% NA NA Breast_cancer,HCC NA NA boxplot LINC00266-1 long intergenic non-protein coding RNA 266-1 chr20 64290385 64313132 + 22748 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00266-1 NA 0.353 30-40% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RPL13AP7 ribosomal protein L13a pseudogene 7 chr21 25361821 25362431 + 611 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL13AP7 NA 1 0-10% NA NA CHD,CRC,HCC,Normal,PAAD CHD(up),CRC(up),HCC(up),PAAD(up) NA boxplot CTD-2547L24.4 NA chr14 91258299 91259003 + 705 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2547L24.4 NA 0.082 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-419I17.1 NA chr8 12537079 12665588 - 128510 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-419I17.1 NA 0.435 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD PAAD(up) NA boxplot AC092597.3 NA chr4 47556731 47560259 - 3529 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC092597.3 NA 0.012 50-60% NA NA Normal,PAAD NA NA boxplot RP4-657D16.3 NA chr1 51793934 51799154 + 5221 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-657D16.3 exo_circ_048352 0.435 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RPL7L1P12 ribosomal protein L7 like 1 pseudogene 12 chr13 98949719 98950447 - 729 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL7L1P12 NA 0.024 50-60% NA NA Normal NA NA boxplot HMGB3P32 high mobility group box 3 pseudogene 32 chr16 57603137 57603697 + 561 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HMGB3P32 NA 0.341 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot LINC00612 long intergenic non-protein coding RNA 612 chr12 9055586 9065070 - 9485 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00612 NA 0.071 90-100% NA NA Breast_cancer,CRC,Normal,PAAD NA NA boxplot HYMAI hydatidiform mole associated and imprinted (non-protein coding) chr6 144007227 144007464 + 238 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HYMAI NA 0.082 30-40% NA NA Breast_cancer,CRC,Normal,PAAD NA NA boxplot RP11-12A20.10 NA chr9 67718821 67719022 + 202 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-12A20.10 NA 0.024 60-70% NA NA HCC,PAAD NA NA boxplot AC104532.4 NA chr19 5911578 5913899 - 2322 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC104532.4 NA 0.082 70-80% NA NA CRC,Normal NA NA boxplot RP11-616L12.4 NA chr12 55122668 55124120 - 1453 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-616L12.4 NA 0.012 80-90% NA NA HCC NA NA boxplot RP11-395I6.3 NA chr4 40166675 40167831 + 1157 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-395I6.3 NA 0.176 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot GLUD1P8 glutamate dehydrogenase 1 pseudogene 8 chr10 47563604 47569697 + 6094 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GLUD1P8 NA 0.012 90-100% Testis 3.065360262 CRC,HCC NA NA boxplot UBE2SP1 ubiquitin conjugating enzyme E2S pseudogene 1 chr17 15704232 15704900 - 669 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=UBE2SP1 NA 0.894 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CRC(down) NA boxplot CTA-29F11.1 NA chr22 46761894 46762563 - 670 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTA-29F11.1 NA 0.576 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-285F16.1 NA chr10 100412934 100413421 + 488 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-285F16.1 NA 0.024 90-100% Brain 1.083434079 Normal NA NA boxplot RP5-864K19.7 NA chr1 38839333 38874494 - 35162 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-864K19.7 exo_circ_038079 0.929 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP1-128M12.3 NA chr12 112000739 112000985 - 247 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-128M12.3 NA 0.106 50-60% NA NA CRC,Normal,PAAD NA NA boxplot FAM27E4 family with sequence similarity 27 member E4 chr9 61861995 61862336 + 342 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FAM27E4 NA 0.071 70-80% NA NA CRC,HCC,PAAD NA NA boxplot RP11-400F19.6 NA chr17 42552436 42554748 - 2313 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-400F19.6 NA 0.918 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot LINC01438 long intergenic non-protein coding RNA 1438 chr4 110794403 110797344 + 2942 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01438 NA 0.012 20-30% NA NA HCC NA NA boxplot RP1-305G21.1 NA chr11 33450646 33450943 + 298 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-305G21.1 NA 0.012 80-90% NA NA Breast_cancer NA NA boxplot RP11-526D8.11 NA chr9 92840955 92841688 - 734 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-526D8.11 NA 0.788 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-651P23.5 NA chr3 149976755 149979355 + 2601 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-651P23.5 NA 0.035 40-50% NA NA Breast_cancer,CRC,Normal NA NA boxplot RP5-1059H15.1 NA chr1 168317497 168376876 + 59380 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-1059H15.1 NA 0.071 20-30% Testis 4.906892038 CRC,HCC,Normal,PAAD NA NA boxplot CTA-125H2.2 NA chr22 25876854 25903247 - 26394 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTA-125H2.2 NA 0.024 20-30% Testis 4.748201016 Breast_cancer,CRC,Normal NA NA boxplot RP11-185E8.1 NA chr3 171468084 171469633 + 1550 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-185E8.1 NA 0.824 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down),HCC(down) NA boxplot RP4-673D20.4 NA chr20 1722045 1722537 - 493 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-673D20.4 NA 0.082 40-50% NA NA HCC,Normal NA NA boxplot CTC-529I10.1 NA chr17 16023323 16023653 - 331 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-529I10.1 NA 0.106 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot BEND3P1 BEN domain containing 3 pseudogene 1 chr10 50655967 50660472 + 4506 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=BEND3P1 NA 0.129 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-471G13.2 NA chrX 95584303 95584942 + 640 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-471G13.2 NA 0.012 60-70% NA NA NA NA NA boxplot RP11-650J17.1 NA chr4 112979590 113071962 - 92373 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-650J17.1 NA 0.012 90-100% Testis 3.945228435 NA NA NA boxplot AC023469.1 NA chr2 151001220 151048774 - 47555 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC023469.1 NA 0.071 60-70% Testis 4.906892038 HCC,Normal,PAAD NA NA boxplot RP11-413P11.1 NA chr1 99472332 99600995 - 128664 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-413P11.1 exo_circ_013805 0.235 40-50% Testis 4.32199669 CRC,HCC,Normal,PAAD NA NA boxplot RP11-840I19.3 NA chr14 65082034 65094212 + 12179 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-840I19.3 NA 0.694 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP13-685P2.7 NA chr3 129345411 129346164 + 754 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP13-685P2.7 NA 0.012 90-100% Testis 1.473405009 Breast_cancer NA NA boxplot KCNJ2-AS1 KCNJ2 antisense RNA 1 (head to head) chr17 70166961 70169402 - 2442 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KCNJ2-AS1 NA 0.282 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-153F10.2 NA chr3 127571232 127571838 - 607 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-153F10.2 NA 0.094 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot ATF4P1 activating transcription factor 4 pseudogene 1 chrX 154622428 154623500 - 1073 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ATF4P1 NA 0.024 60-70% NA NA PAAD NA NA boxplot LINC01311 long intergenic non-protein coding RNA 1311 chr22 19171395 19172839 + 1445 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01311 NA 0.059 80-90% NA NA Breast_cancer,CRC,Normal NA NA boxplot RP11-6N17.9 NA chr17 47945424 47974438 + 29015 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-6N17.9 NA 0.635 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-381O6.1 NA chr13 107465984 107466674 - 691 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-381O6.1 exo_circ_051164 0.024 60-70% NA NA Normal NA NA boxplot RP11-26L20.5 NA chr16 55321575 55322686 - 1112 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-26L20.5 NA 0.012 80-90% NA NA NA NA NA boxplot RP11-218M11.7 NA chr17 30551193 30551802 + 610 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-218M11.7 NA 0.012 80-90% NA NA Breast_cancer NA NA boxplot RP11-147L13.15 NA chr17 68205489 68207493 + 2005 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-147L13.15 NA 0.918 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-613C6.2 NA chr17 49708334 49720060 + 11727 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-613C6.2 NA 0.153 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-54O7.2 NA chr1 914171 914971 + 801 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-54O7.2 NA 0.047 70-80% NA NA HCC,Normal,PAAD NA NA boxplot MIPEPP3 mitochondrial intermediate peptidase pseudogene 3 chr13 21298139 21306373 + 8235 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MIPEPP3 exo_circ_045577 0.329 40-50% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot AC004987.10 NA chr7 39833286 39833793 - 508 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC004987.10 NA 0.035 90-100% NA NA Breast_cancer,Normal NA NA boxplot RP11-632K21.6 NA chr7 150676833 150677918 - 1086 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-632K21.6 NA 0.012 90-100% NA NA Normal NA NA boxplot AC074367.1 NA chr2 63232453 63233577 - 1125 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC074367.1 NA 0.047 70-80% NA NA CRC,Normal,PAAD NA NA boxplot RP11-298E9.7 NA chr10 3134566 3145166 + 10601 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-298E9.7 NA 0.412 70-80% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RPL23AP81 ribosomal protein L23a pseudogene 81 chr20 41196691 41197157 + 467 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL23AP81 NA 0.035 90-100% NA NA HCC NA NA boxplot CTA-276F8.1 NA chr16 14150833 14153235 + 2403 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTA-276F8.1 NA 0.224 10-20% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CTD-2368P22.1 NA chr19 58002061 58011232 + 9172 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2368P22.1 NA 0.765 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-511H23.2 NA chr7 17940503 17942922 + 2420 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-511H23.2 NA 0.059 70-80% NA NA CRC,Normal,PAAD NA NA boxplot CTD-3239E11.2 NA chr8 92882984 92965645 + 82662 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-3239E11.2 NA 0.059 30-40% Testis 4.68067129 Breast_cancer,Normal NA NA boxplot RP6-109B7.2 NA chr22 46055740 46058160 - 2421 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP6-109B7.2 NA 0.024 10-20% NA NA Breast_cancer,Normal NA NA boxplot LA16c-349E10.1 NA chr16 654611 656194 - 1584 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LA16c-349E10.1 NA 0.012 40-50% NA NA Breast_cancer,CRC,Normal NA NA boxplot RP11-535M15.1 NA chr9 96687056 96721121 + 34066 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-535M15.1 exo_circ_035398 0.282 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CTD-2227E11.1 NA chr7 25948657 25949403 - 747 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2227E11.1 NA 0.012 50-60% NA NA NA NA NA boxplot LINC00602 long intergenic non-protein coding RNA 602 chr6 165987551 165989615 + 2065 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00602 NA 0.012 50-60% NA NA Breast_cancer,HCC NA NA boxplot RP11-489M13.1 NA chr4 4076711 4077491 - 781 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-489M13.1 NA 0.012 60-70% Pituitary 4.182738435 NA NA NA boxplot RP1-93H18.6 NA chr6 116460739 116463692 - 2954 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-93H18.6 NA 0.388 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-525G13.2 NA chr1 165890795 165900683 - 9889 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-525G13.2 NA 0.129 60-70% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot EXTL3-AS1 EXTL3 antisense RNA 1 chr8 28696198 28701464 - 5267 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=EXTL3-AS1 NA 0.106 50-60% NA NA Breast_cancer,CRC,Normal NA NA boxplot RP11-402L5.2 NA chr8 99804159 99804341 - 183 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-402L5.2 NA 0.012 30-40% NA NA Normal NA NA boxplot RP11-152H18.4 NA chr11 8679089 8680913 + 1825 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-152H18.4 NA 0.012 70-80% Testis 2.694047109 Breast_cancer,Normal NA NA boxplot RP5-1120P11.1 NA chr6 43995723 44074652 - 78930 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-1120P11.1 NA 0.271 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CUL4AP1 cullin 4A pseudogene 1 chr4 116425983 116430892 - 4910 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CUL4AP1 NA 0.012 10-20% NA NA HCC NA NA boxplot REXO1L12P REX1, RNA exonuclease 1 homolog-like 12, pseudogene chr8 85714922 85715833 + 912 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=REXO1L12P NA 0.035 70-80% NA NA Breast_cancer,HCC,PAAD NA NA boxplot AC012513.4 NA chr2 216174896 216176032 - 1137 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC012513.4 NA 0.012 90-100% NA NA Breast_cancer,CRC,PAAD NA NA boxplot LINC01191 long intergenic non-protein coding RNA 1191 chr2 113979569 114007302 + 27734 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01191 NA 0.059 60-70% NA NA CRC,Normal NA NA boxplot RP11-147L13.14 NA chr17 68188547 68189165 + 619 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-147L13.14 NA 0.494 10-20% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down) NA boxplot LINC00311 long intergenic non-protein coding RNA 311 chr16 85282958 85285963 + 3006 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00311 NA 0.024 10-20% NA NA PAAD NA NA boxplot RP11-114H24.4 NA chr15 77941442 77944582 - 3141 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-114H24.4 NA 0.012 70-80% Testis 4.398514138 Breast_cancer NA NA boxplot AC006160.5 NA chr4 17587467 17614571 - 27105 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC006160.5 NA 0.047 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-671J11.4 NA chr14 34556774 34561298 + 4525 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-671J11.4 NA 0.059 80-90% Testis 1.040168951 CRC,HCC NA NA boxplot RP11-305L7.7 NA chr9 91206175 91210299 - 4125 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-305L7.7 NA 0.071 40-50% NA NA Breast_cancer,CRC,Normal,PAAD NA NA boxplot RP11-566E18.1 NA chr2 216211404 216213519 + 2116 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-566E18.1 NA 0.894 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(down) NA boxplot RP11-111F16.2 NA chrX 111618808 111619094 + 287 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-111F16.2 NA 0.165 50-60% NA NA Normal,PAAD NA NA boxplot CTC-523E23.1 NA chr19 34811589 34814345 - 2757 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-523E23.1 NA 0.565 10-20% Testis 3.353079428 CRC,HCC,Normal,PAAD NA NA boxplot AC005162.5 NA chr7 28987028 28988899 + 1872 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC005162.5 NA 0.012 70-80% NA NA CRC,HCC NA NA boxplot RP11-498B4.5 NA chr10 116670103 116672739 + 2637 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-498B4.5 NA 0.024 80-90% Testis 2.930726784 Breast_cancer,HCC,PAAD NA NA boxplot ACTG1P24 actin gamma 1 pseudogene 24 chr17 17242010 17242886 + 877 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ACTG1P24 NA 0.012 80-90% NA NA Normal NA NA boxplot KCNQ1OT1 KCNQ1 opposite strand/antisense transcript 1 (non-protein coding) chr11 2608328 2699994 - 91667 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KCNQ1OT1 NA 0.682 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down),CRC(up),HCC(down),PAAD(up) NA boxplot FAM92A1P1 family with sequence similarity 92, member A2 (pseudogene) chr15 41163162 41164374 + 1213 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FAM92A1P1 NA 0.518 20-30% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-399H11.2 NA chr9 135245696 135252708 - 7013 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-399H11.2 NA 0.012 40-50% NA NA Breast_cancer,PAAD NA NA boxplot RP11-473O4.1 NA chr8 129864478 129865052 + 575 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-473O4.1 NA 0.012 90-100% Whole Blood 3.394593657 HCC NA NA boxplot PWRN2 Prader-Willi region non-protein coding RNA 2 chr15 24162754 24169948 - 7195 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PWRN2 NA 0.012 40-50% Testis 4.754502641 Breast_cancer,Normal NA NA boxplot RP13-650J16.1 NA chr17 82037905 82039380 + 1476 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP13-650J16.1 NA 0.071 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot ADAM20P1 ADAM metallopeptidase domain 20 pseudogene 1 chr14 70468881 70483756 - 14876 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ADAM20P1 NA 0.118 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot GAS6-AS2 GAS6 antisense RNA 2 (head to head) chr13 113864168 113866833 + 2666 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GAS6-AS2 NA 0.165 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-771F20.1 NA chr8 103768281 103769029 + 749 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-771F20.1 NA 0.012 20-30% Pituitary 3.576176747 CRC NA NA boxplot BANF1P2 barrier to autointegration factor 1 pseudogene 2 chr10 133344643 133344906 - 264 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=BANF1P2 NA 0.012 80-90% NA NA HCC NA NA boxplot RP1-134E15.3 NA chr6 106100140 106100593 + 454 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-134E15.3 NA 0.059 60-70% NA NA CRC,HCC,PAAD NA NA boxplot OCIAD1-AS1 OCIAD1 antisense RNA 1 chr4 48852008 48860203 - 8196 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=OCIAD1-AS1 NA 0.059 30-40% NA NA HCC,Normal NA NA boxplot RP11-553K8.2 NA chr1 198597724 198598868 - 1145 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-553K8.2 NA 0.024 50-60% Spleen 4.227407584 CRC,Normal NA NA boxplot RP11-95M15.1 NA chr6 137673378 137763984 + 90607 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-95M15.1 NA 0.012 60-70% Testis 4.584900444 NA NA NA boxplot RP11-20O24.4 NA chr1 108992282 108992836 + 555 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-20O24.4 exo_circ_037860 0.929 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down),HCC(up) NA boxplot RP11-23J9.4 NA chr9 97238497 97377287 + 138791 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-23J9.4 exo_circ_002263,exo_circ_047614 0.929 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot CTB-83J4.2 NA chr19 54589441 54590287 + 847 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTB-83J4.2 NA 0.176 90-100% NA NA CRC,HCC,Normal,PAAD NA NA boxplot AC005062.2 NA chr7 19918981 20140453 - 221473 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC005062.2 exo_circ_039161 0.882 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down) NA boxplot LINC01366 long intergenic non-protein coding RNA 1366 chr5 170331429 170333879 + 2451 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01366 NA 0.329 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-812E19.14 NA chr16 33965655 33966091 - 437 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-812E19.14 NA 0.012 50-60% Testis 4.906892038 Breast_cancer,PAAD NA NA boxplot LINC01511 long intergenic non-protein coding RNA 1511 chr5 1363582 1380067 - 16486 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01511 NA 0.047 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CTD-3203P2.3 NA chr16 27313387 27314101 - 715 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-3203P2.3 NA 0.035 70-80% NA NA CRC,HCC,Normal NA NA boxplot GS1-124K5.2 NA chr7 66409143 66490059 - 80917 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GS1-124K5.2 exo_circ_046689,exo_circ_039203 0.906 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-23J9.6 NA chr9 97238645 97246184 + 7540 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-23J9.6 NA 0.012 50-60% NA NA HCC,Normal NA NA boxplot RP11-245C17.2 NA chr15 84685884 84686946 + 1063 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-245C17.2 NA 0.012 70-80% NA NA Normal NA NA boxplot RP11-395P16.1 NA chr3 47663626 47663934 + 309 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-395P16.1 NA 0.012 10-20% Cervix 4.906892038 Normal NA NA boxplot FLJ30679 uncharacterized protein FLJ30679 chr16 86555320 86557299 + 1980 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FLJ30679 NA 0.035 10-20% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot AF127577.13 NA chr21 15050189 15052379 + 2191 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AF127577.13 NA 0.012 60-70% NA NA HCC NA NA boxplot FAM66B family with sequence similarity 66 member B chr8 7301611 7355354 - 53744 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FAM66B NA 0.294 60-70% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot PSMD12P proteasome 26S subunit, non-ATPase, 12 pseudogene chr3 72876737 72878102 - 1366 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PSMD12P NA 0.118 50-60% Testis 4.906892038 CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP5-1159O4.1 NA chr7 7552462 7566996 - 14535 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-1159O4.1 NA 0.294 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC005592.2 NA chr5 142325293 142672001 + 346709 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC005592.2 NA 0.047 50-60% NA NA Breast_cancer,HCC,PAAD NA NA boxplot TRIM51BP tripartite motif-containing 51B, pseudogene chr11 89854953 89862893 + 7941 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TRIM51BP NA 0.012 30-40% NA NA HCC NA NA boxplot MORF4L1P4 mortality factor 4 like 1 pseudogene 4 chr13 41199832 41200807 - 976 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MORF4L1P4 NA 0.012 80-90% Testis 3.922859967 Breast_cancer NA NA boxplot RP11-365O16.1 NA chr1 224175476 224175706 - 231 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-365O16.1 NA 0.753 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot MKRN4P makorin ring finger protein 4, pseudogene chrX 40834485 40836005 + 1521 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MKRN4P NA 0.188 80-90% Testis 4.717668684 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot EIF4A1P4 eukaryotic translation initiation factor 4A1 pseudogene 4 chr12 53153272 53154484 + 1213 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=EIF4A1P4 NA 0.118 90-100% NA NA CHD,CRC,Normal,PAAD NA NA boxplot RP11-274M17.3 NA chr12 74248637 74283669 - 35033 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-274M17.3 NA 0.024 80-90% Testis 4.906892038 CRC NA NA boxplot RP11-536N17.1 NA chr5 172816621 172819958 + 3338 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-536N17.1 NA 0.012 70-80% Testis 4.906892038 Breast_cancer,CRC NA NA boxplot AC105402.3 NA chr2 148872253 148872797 - 545 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC105402.3 NA 0.035 10-20% NA NA Breast_cancer,CRC,Normal,PAAD NA NA boxplot RP11-524D16__A.3 NA chrX 100673330 100673981 + 652 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-524D16__A.3 NA 0.024 10-20% NA NA CRC NA NA boxplot CTC-321K16.1 NA chr5 135559577 135634874 + 75298 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-321K16.1 NA 0.024 50-60% Skin 1.494021078 HCC,Normal NA NA boxplot RP11-449G16.1 NA chr2 39323328 39323804 - 477 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-449G16.1 NA 0.012 30-40% NA NA NA NA NA boxplot ZFY-AS1 ZFY antisense RNA 1 chrY 2966844 3002626 - 35783 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ZFY-AS1 NA 0.259 10-20% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CYP51A1P2 cytochrome P450 family 51 subfamily A member 1 pseudogene 2 chr13 28722386 28724021 - 1636 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CYP51A1P2 NA 0.647 30-40% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-631N16.2 NA chr12 62602752 62622213 + 19462 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-631N16.2 NA 0.729 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(up),PAAD(up) NA boxplot RP11-5C23.2 NA chr7 154956429 154957107 + 679 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-5C23.2 NA 0.165 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot AC091633.3 NA chr3 195544048 195550581 + 6534 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC091633.3 exo_circ_049043 0.235 20-30% Testis 2.66772465 CRC,HCC,Normal,PAAD NA NA boxplot HSPA8P5 heat shock protein family A (Hsp70) member 8 pseudogene 5 chr12 4097451 4099519 + 2069 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HSPA8P5 NA 0.247 80-90% Pancreas 3.674383429 Breast_cancer,CRC,HCC,Normal NA NA boxplot ENPP7P11 ectonucleotide pyrophosphatase/phosphodiesterase 7 pseudogene 11 chr4 9677308 9677934 + 627 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ENPP7P11 NA 0.035 70-80% NA NA Breast_cancer,CRC,Normal,PAAD NA NA boxplot RP11-298E9.6 NA chr10 3240371 3257210 - 16840 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-298E9.6 NA 0.047 20-30% Brain 3.28320024 CRC,Normal NA NA boxplot SRP54-AS1 SRP54 antisense RNA 1 (head to head) chr14 34920858 34982532 - 61675 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SRP54-AS1 exo_circ_024333,exo_circ_056944,exo_circ_031261,exo_circ_000396,exo_circ_032141,exo_circ_056945,exo_circ_011049,exo_circ_051326,exo_circ_029671 0.882 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-686D22.7 NA chr17 35409602 35410228 - 627 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-686D22.7 NA 0.824 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RAB5CP2 RAB5C, member RAS oncogene family pseudogene 2 chr5 91476382 91477018 + 637 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RAB5CP2 exo_circ_038928,exo_circ_031055,exo_circ_055011,exo_circ_055012 0.118 60-70% Testis 3.324523942 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP4-758J18.10 NA chr1 1430539 1434573 - 4035 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-758J18.10 NA 0.035 30-40% NA NA Breast_cancer,HCC,Normal NA NA boxplot RP11-242D8.3 NA chr17 43169880 43170077 - 198 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-242D8.3 NA 0.035 40-50% NA NA Normal,PAAD NA NA boxplot RP11-175P19.2 NA chr3 193578812 193593090 - 14279 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-175P19.2 NA 0.506 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot LINC00899 long intergenic non-protein coding RNA 899 chr22 46039907 46044853 - 4947 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00899 NA 0.588 30-40% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-727A23.10 NA chr11 83286128 83423516 + 137389 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-727A23.10 NA 0.176 20-30% Testis 1.190472549 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RPL23AP22 ribosomal protein L23a pseudogene 22 chr1 193756815 193757267 - 453 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL23AP22 NA 0.012 70-80% NA NA HCC NA NA boxplot RN7SKP23 RNA, 7SK small nuclear pseudogene 23 chr16 23412380 23416680 + 4301 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RN7SKP23 NA 0.012 70-80% NA NA Breast_cancer,HCC NA NA boxplot RP11-533E19.7 NA chr1 179881607 179882595 - 989 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-533E19.7 NA 0.353 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot AC067959.1 NA chr2 21221175 21970959 + 749785 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC067959.1 NA 0.2 40-50% Pituitary 2.475283902 CRC,HCC,Normal,PAAD NA NA boxplot RP11-70O5.2 NA chr16 69240549 69241929 + 1381 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-70O5.2 NA 0.035 50-60% Testis 4.906892038 CRC,HCC NA NA boxplot AC005539.2 NA chr2 157961410 157962888 - 1479 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC005539.2 NA 0.012 90-100% NA NA Breast_cancer,CRC NA NA boxplot RP11-837J7.4 NA chr12 109948389 109949029 + 641 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-837J7.4 NA 0.565 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP1-138B7.7 NA chr20 43590009 43590596 - 588 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-138B7.7 NA 0.047 70-80% NA NA CRC,HCC NA NA boxplot AP006621.8 NA chr11 823634 832883 - 9250 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AP006621.8 NA 0.341 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot KCTD9P5 potassium channel tetramerization domain containing 9 pseudogene 5 chr5 37505688 37506857 - 1170 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KCTD9P5 NA 0.376 50-60% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot RPL31P63 ribosomal protein L31 pseudogene 63 chrX 68600099 68600473 + 375 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL31P63 NA 0.035 90-100% Cervix 4.906892038 CRC,HCC,Normal,PAAD NA NA boxplot ABCC6P2 ATP binding cassette subfamily C member 6 pseudogene 2 chr16 14820792 14824702 - 3911 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ABCC6P2 NA 0.035 90-100% NA NA Breast_cancer,HCC,PAAD NA NA boxplot RP11-712L6.8 NA chr11 126376773 126376893 - 121 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-712L6.8 NA 0.012 70-80% NA NA Normal NA NA boxplot AC107072.2 NA chr4 76637623 76644368 + 6746 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC107072.2 NA 0.024 10-20% NA NA PAAD NA NA boxplot AP000577.2 NA chr11 74204869 74205746 + 878 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AP000577.2 NA 0.106 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-475I24.3 NA chr9 42566679 42569353 - 2675 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-475I24.3 NA 0.212 70-80% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-2A1.1 NA chr12 41911256 41912212 + 957 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-2A1.1 NA 0.012 20-30% NA NA Breast_cancer,PAAD NA NA boxplot RP11-177H2.1 NA chr8 10856085 10859436 - 3352 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-177H2.1 NA 0.035 90-100% NA NA HCC,PAAD NA NA boxplot RP11-221J22.2 NA chr3 101960358 101997926 + 37569 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-221J22.2 NA 0.718 10-20% NA NA CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-169K17.3 NA chr3 11611602 11612197 + 596 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-169K17.3 NA 0.012 90-100% NA NA Breast_cancer,CRC NA NA boxplot RP11-160E2.17 NA chr17 19077775 19087878 + 10104 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-160E2.17 NA 0.012 70-80% NA NA CRC,PAAD NA NA boxplot LAMP5-AS1 LAMP5 antisense RNA 1 chr20 9505180 9514998 - 9819 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LAMP5-AS1 NA 0.035 90-100% NA NA Breast_cancer,CRC,Normal NA NA boxplot OR2W2P olfactory receptor family 2 subfamily W member 2 pseudogene chr6 28033947 28034855 + 909 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=OR2W2P NA 0.012 90-100% NA NA Breast_cancer,CRC NA NA boxplot RP11-1124B17.1 NA chr17 72342940 72355136 + 12197 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1124B17.1 NA 0.024 80-90% Testis 4.078505606 Breast_cancer,HCC,Normal NA NA boxplot RP11-91J3.1 NA chr4 187441677 187444298 - 2622 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-91J3.1 NA 0.012 70-80% NA NA Normal NA NA boxplot RP1-125I3.4 NA chr1 25888970 25889109 + 140 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-125I3.4 NA 0.012 90-100% Testis 4.273221659 NA NA NA boxplot RP11-862P13.1 NA chr14 66969038 66969816 - 779 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-862P13.1 NA 0.012 80-90% Brain 4.906892038 Normal NA NA boxplot SNX18P2 sorting nexin 18 pseudogene 2 chr9 92893698 92894505 - 808 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SNX18P2 NA 0.012 10-20% Testis 4.906892038 Breast_cancer,Normal NA NA boxplot RP11-180C16.1 NA chr7 131493964 131497694 - 3731 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-180C16.1 NA 0.271 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down) NA boxplot RPS3P7 ribosomal protein S3 pseudogene 7 chr16 78825281 78826006 + 726 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPS3P7 NA 0.047 40-50% Testis 4.270138499 CRC,Normal,PAAD NA NA boxplot RP11-178L8.5 NA chr16 87262759 87292438 - 29680 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-178L8.5 NA 0.035 70-80% Testis 4.860239619 Breast_cancer,Normal NA NA boxplot RP11-271M24.2 NA chr13 25300124 25301438 - 1315 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-271M24.2 NA 0.012 70-80% Testis 2.320743875 CRC NA NA boxplot EEF1GP1 eukaryotic translation elongation factor 1 gamma pseudogene 1 chr7 125033453 125035301 + 1849 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=EEF1GP1 NA 0.106 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot FAM106CP family with sequence similarity 106 member C, pseudogene chr17 16788901 16789407 + 507 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FAM106CP NA 0.012 90-100% Testis 4.252857084 NA NA NA boxplot RP11-1151B14.4 NA chr18 58535415 58538552 + 3138 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1151B14.4 NA 0.188 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-428F8.2 NA chr6 111227747 111259034 - 31288 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-428F8.2 NA 0.012 90-100% Testis 4.906892038 HCC NA NA boxplot RP11-541E12.1 NA chr2 38535258 38536249 - 992 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-541E12.1 NA 0.024 50-60% NA NA PAAD NA NA boxplot AP000476.1 NA chr21 24428740 24547942 + 119203 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AP000476.1 exo_circ_052285,exo_circ_034866 0.918 0-10% Spleen 1.397745417 Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot GS1-304P7.2 NA chr1 186578279 186579299 + 1021 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GS1-304P7.2 NA 0.012 20-30% NA NA Breast_cancer,Normal NA NA boxplot CTD-2228K2.1 NA chr5 418703 419109 + 407 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2228K2.1 NA 0.024 10-20% Testis 3.284681374 PAAD NA NA boxplot RP11-225H22.4 NA chr10 103452846 103462695 + 9850 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-225H22.4 NA 0.082 30-40% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot CCT4P2 chaperonin containing TCP1 subunit 4 pseudogene 2 chrX 65270913 65273019 + 2107 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CCT4P2 NA 0.024 60-70% NA NA Normal NA NA boxplot AF131215.4 NA chr8 11136898 11138607 - 1710 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AF131215.4 NA 0.082 50-60% NA NA Breast_cancer,CRC,Normal NA NA boxplot LINC00237 long intergenic non-protein coding RNA 237 chr20 21087604 21106358 - 18755 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00237 NA 0.153 30-40% Pituitary 3.238909487 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CSPG4P11 chondroitin sulfate proteoglycan 4 pseudogene 11 chr15 84186752 84197384 + 10633 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CSPG4P11 NA 0.071 30-40% NA NA Breast_cancer,CRC,HCC,PAAD NA NA boxplot RP11-783K16.14 NA chr11 64229214 64234352 - 5139 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-783K16.14 NA 0.341 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP13-131K19.7 NA chr3 48985485 48985963 - 479 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP13-131K19.7 NA 0.259 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP5-1024C24.1 NA chr11 30584130 30630508 + 46379 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-1024C24.1 NA 0.024 50-60% NA NA Breast_cancer,Normal NA NA boxplot RP11-2C24.3 NA chr16 30773532 30776033 - 2502 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-2C24.3 NA 0.729 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot CTD-3222D19.9 NA chr19 16586905 16589409 + 2505 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-3222D19.9 NA 0.682 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),PAAD(down) NA boxplot ST3GAL1P1 ST3 beta-galactoside alpha-2,3-sialyltransferase 1 pseudogene 1 chr4 67716375 67717388 - 1014 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ST3GAL1P1 NA 0.012 90-100% NA NA Breast_cancer,HCC NA NA boxplot AC005336.4 NA chr19 15910582 15911824 - 1243 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC005336.4 NA 0.059 0-10% Liver 1.639992288 CRC,HCC,PAAD NA NA boxplot CCDC18-AS1 CCDC18 antisense RNA 1 chr1 93262186 93346025 - 83840 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CCDC18-AS1 exo_circ_053445,exo_circ_007391,exo_circ_018282,exo_circ_003274,exo_circ_009623,exo_circ_001970 0.871 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),PAAD(up) NA boxplot AC137932.4 NA chr16 89268104 89273044 + 4941 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC137932.4 NA 0.118 60-70% NA NA Breast_cancer,CRC,Normal,PAAD NA NA boxplot RP11-797A18.3 NA chr15 77043680 77045160 + 1481 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-797A18.3 NA 0.153 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot MAN1B1-AS1 MAN1B1 antisense RNA 1 (head to head) chr9 137084946 137086817 - 1872 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MAN1B1-AS1 NA 0.682 20-30% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot AC008280.3 NA chr2 54079974 54080280 - 307 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC008280.3 NA 0.047 80-90% NA NA HCC,Normal NA NA boxplot KIF4CP kinesin family member 4C, pseudogene chrX 79323446 79325217 + 1772 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KIF4CP NA 0.035 40-50% NA NA Breast_cancer,CRC,Normal NA NA boxplot RP11-109E24.1 NA chr4 42706107 42707335 + 1229 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-109E24.1 NA 0.059 40-50% NA NA CRC,Normal NA NA boxplot RP11-849I19.2 NA chr18 79085134 79086435 + 1302 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-849I19.2 NA 0.106 20-30% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot NONOP2 non-POU domain containing, octamer-binding pseudogene 2 chr2 60936819 60938049 - 1231 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NONOP2 NA 0.376 20-30% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot NDUFB4P6 NADH:ubiquinone oxidoreductase subunit B4 pseudogene 6 chr2 112286057 112286422 - 366 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NDUFB4P6 NA 0.012 90-100% NA NA Normal NA NA boxplot RP11-428L9.2 NA chr10 8970125 8973468 + 3344 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-428L9.2 NA 0.012 50-60% Testis 4.906892038 HCC NA NA boxplot RP3-369A17.4 NA chr6 24742302 24751921 + 9620 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-369A17.4 NA 0.024 50-60% NA NA CRC,PAAD NA NA boxplot RP11-213G6.2 NA chr8 23726331 23743042 - 16712 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-213G6.2 NA 0.012 50-60% Heart 4.494789343 HCC NA NA boxplot DUTP6 deoxyuridine triphosphatase pseudogene 6 chr1 166868748 166869209 + 462 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DUTP6 NA 0.106 60-70% NA NA CRC,HCC,Normal NA NA boxplot RP11-318G8.2 NA chr12 25435581 25436238 - 658 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-318G8.2 NA 0.012 70-80% Testis 4.906892038 Breast_cancer NA NA boxplot PA2G4P4 proliferation-associated 2G4 pseudogene 4 chr3 156809551 156810732 - 1182 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PA2G4P4 NA 0.859 40-50% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-27P7.1 NA chr8 60049587 60074715 + 25129 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-27P7.1 NA 0.012 60-70% Testis 4.906892038 Breast_cancer,HCC NA NA boxplot RP11-147L13.8 NA chr17 68189884 68192802 + 2919 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-147L13.8 NA 0.435 10-20% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CTD-3154N5.1 NA chr15 74613194 74615596 - 2403 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-3154N5.1 NA 0.012 70-80% Testis 1.904601666 Breast_cancer,HCC,Normal NA NA boxplot RPL13P12 ribosomal protein L13 pseudogene 12 chr17 17383377 17384012 - 636 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL13P12 NA 1 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot CTD-2510F5.4 NA chr17 59202677 59203829 - 1153 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2510F5.4 NA 0.153 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-346C4.3 NA chr13 107870383 107873372 + 2990 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-346C4.3 NA 0.082 20-30% NA NA HCC,Normal,PAAD NA NA boxplot RP11-438D8.2 NA chr3 141267353 141367137 - 99785 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-438D8.2 NA 0.024 80-90% Testis 3.320178278 CRC,Normal NA NA boxplot CTB-78H18.1 NA chr5 171773652 171774739 + 1088 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTB-78H18.1 NA 0.012 20-30% Testis 4.906892038 Breast_cancer,PAAD NA NA boxplot RP11-351M8.2 NA chr15 80896190 80948867 - 52678 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-351M8.2 NA 0.035 60-70% NA NA CRC,Normal,PAAD NA NA boxplot RP11-621L6.2 NA chr18 24364787 24367984 + 3198 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-621L6.2 NA 0.012 30-40% NA NA Normal NA NA boxplot RP11-1049A21.2 NA chr12 54543111 54544105 - 995 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1049A21.2 NA 0.165 40-50% NA NA HCC,Normal,PAAD NA NA boxplot HMGN1P38 high mobility group nucleosome binding domain 1 pseudogene 38 chr15 92711808 92712110 + 303 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HMGN1P38 NA 1 0-10% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot HMGB1P38 high mobility group box 1 pseudogene 38 chr3 79957566 79958142 - 577 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HMGB1P38 NA 0.012 60-70% NA NA Breast_cancer NA NA boxplot RPS24P14 ribosomal protein S24 pseudogene 14 chr11 3559657 3560022 + 366 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPS24P14 NA 0.035 40-50% NA NA HCC,Normal NA NA boxplot RP11-325K4.3 NA chr16 56940278 56941342 + 1065 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-325K4.3 NA 0.106 30-40% NA NA CRC,HCC,Normal NA NA boxplot HMGB3P2 high mobility group box 3 pseudogene 2 chr20 36076018 36076601 - 584 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HMGB3P2 NA 0.012 40-50% Testis 4.906892038 Breast_cancer,PAAD NA NA boxplot BCL2L12P1 BCL2-like 12 (proline rich) pseudogene 1 chr3 131526447 131527179 + 733 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=BCL2L12P1 NA 0.024 20-30% NA NA Breast_cancer,HCC,Normal NA NA boxplot RP11-1099M24.8 NA chr17 7954868 7955622 + 755 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1099M24.8 NA 0.024 70-80% Testis 3.938297121 Breast_cancer,HCC,Normal NA NA boxplot RP5-1139B12.3 NA chr1 228274584 228276066 - 1483 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-1139B12.3 NA 0.388 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP5-1029K10.4 NA chr17 49544847 49577962 - 33116 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-1029K10.4 NA 0.012 60-70% NA NA Breast_cancer NA NA boxplot RP3-500L14.2 NA chr6 13825432 13826574 + 1143 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-500L14.2 NA 0.024 70-80% NA NA CRC,Normal NA NA boxplot RP11-337A23.5 NA chr9 26880178 26880549 - 372 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-337A23.5 NA 0.071 40-50% NA NA Breast_cancer,CRC,Normal,PAAD NA NA boxplot RP11-305P22.9 NA chr20 63009383 63085071 + 75689 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-305P22.9 NA 0.012 40-50% Testis 3.65304072 Breast_cancer,PAAD NA NA boxplot LINC01566 long intergenic non-protein coding RNA 1566 chr16 35363412 35390584 + 27173 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01566 NA 0.012 70-80% NA NA Breast_cancer,PAAD NA NA boxplot RP11-455J20.3 NA chr2 189763859 189764456 - 598 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-455J20.3 NA 0.047 60-70% NA NA CRC,HCC,Normal NA NA boxplot RP11-257O5.4 NA chr17 54964474 54964679 + 206 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-257O5.4 NA 0.012 90-100% NA NA NA NA NA boxplot PPP2R2DP1 protein phosphatase 2 regulatory subunit B, delta pseudogene 1 chr3 38051759 38052395 + 637 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PPP2R2DP1 NA 0.012 90-100% NA NA CRC NA NA boxplot RPS26P15 ribosomal protein S26 pseudogene 15 chr1 58056133 58056480 - 348 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPS26P15 NA 0.776 40-50% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot TAF9P3 TATA-box binding protein associated factor 9 pseudogene 3 chr19 30037285 30037411 + 127 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TAF9P3 NA 0.035 70-80% NA NA CRC NA NA boxplot OR13D3P olfactory receptor family 13 subfamily D member 3 pseudogene chr9 104722335 104723271 + 937 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=OR13D3P NA 0.012 0-10% NA NA Breast_cancer,Normal NA NA boxplot RP11-973H7.1 NA chr18 12774651 12775923 - 1273 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-973H7.1 NA 0.365 40-50% Testis 1.524229554 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-521C20.2 NA chr15 40075204 40078704 - 3501 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-521C20.2 NA 0.012 40-50% NA NA Breast_cancer,HCC NA NA boxplot LINC00265 long intergenic non-protein coding RNA 265 chr7 39733632 39793092 + 59461 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00265 NA 0.812 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP1-224A6.3 NA chr1 22023990 22026048 - 2059 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-224A6.3 exo_circ_027121 0.118 20-30% Testis 1.982813432 CRC,Normal,PAAD NA NA boxplot RP11-3J10.7 NA chr9 37836044 37836394 + 351 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-3J10.7 NA 0.271 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-63G10.4 NA chr1 58715609 58771295 + 55687 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-63G10.4 NA 0.141 10-20% NA NA Breast_cancer,CRC,Normal,PAAD NA NA boxplot RP11-242J7.1 NA chr4 184584093 184625030 - 40938 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-242J7.1 NA 0.106 10-20% NA NA CRC,HCC,Normal,PAAD NA NA boxplot AC005330.2 NA chr19 1321225 1322846 + 1622 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC005330.2 NA 0.024 90-100% NA NA Breast_cancer,CRC,HCC NA NA boxplot RP11-261B23.1 NA chr15 30223017 30225564 + 2548 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-261B23.1 NA 0.024 20-30% Testis 4.773897787 Breast_cancer,PAAD NA NA boxplot RP11-1105G2.4 NA chr12 94272150 94277195 - 5046 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1105G2.4 NA 0.035 10-20% NA NA CRC,PAAD NA NA boxplot RP11-332E19.2 NA chr14 78279572 78283376 - 3805 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-332E19.2 NA 0.012 60-70% NA NA Breast_cancer,HCC NA NA boxplot CTB-60B18.18 NA chr19 49064259 49064856 + 598 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTB-60B18.18 NA 0.012 20-30% NA NA Breast_cancer,PAAD NA NA boxplot RP11-158H5.7 NA chr18 35280867 35290201 - 9335 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-158H5.7 NA 0.706 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),HCC(down) NA boxplot RP11-644A7.2 NA chr18 70489630 70491205 + 1576 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-644A7.2 NA 0.035 70-80% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot AC005042.4 NA chr2 158658337 158735002 - 76666 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC005042.4 NA 0.259 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-35J23.1 NA chr10 96292685 96306695 - 14011 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-35J23.1 NA 0.012 50-60% NA NA CRC NA NA boxplot RP11-517P14.2 NA chr10 43420738 43422100 + 1363 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-517P14.2 NA 0.376 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot BX255923.2 NA chr9 63974762 64004155 - 29394 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=BX255923.2 NA 0.541 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-430C1.1 NA chr16 59855353 60053973 + 198621 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-430C1.1 NA 0.012 20-30% NA NA Breast_cancer NA NA boxplot LINC01538 long intergenic non-protein coding RNA 1538 chr18 64213082 64260055 - 46974 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01538 NA 0.012 10-20% NA NA Breast_cancer,CHD NA NA boxplot AP001631.10 NA chr21 43159066 43162277 - 3212 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AP001631.10 NA 0.012 80-90% Liver 3.037272045 NA NA NA boxplot RP11-362F19.3 NA chr4 141430831 141431284 + 454 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-362F19.3 NA 0.376 20-30% Thyroid 1.128498058 CRC,HCC,Normal,PAAD NA NA boxplot LINC00443 long intergenic non-protein coding RNA 443 chr13 106653916 106672163 + 18248 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00443 exo_circ_045563 0.082 20-30% Testis 2.365332471 HCC,Normal,PAAD NA NA boxplot LA16c-380F5.1 NA chr16 1530715 1533301 + 2587 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LA16c-380F5.1 NA 0.024 60-70% NA NA Breast_cancer,HCC,PAAD NA NA boxplot FTH1P22 ferritin, heavy polypeptide 1 pseudogene 22 chr1 116775104 116775623 - 520 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FTH1P22 NA 0.753 10-20% Spleen 1.287076227 CHD,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down) NA boxplot RP11-499O7.4 NA chr10 5048812 5051670 + 2859 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-499O7.4 NA 0.024 80-90% NA NA PAAD NA NA boxplot RP11-1036E20.7 NA chr11 59287339 59289486 - 2148 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1036E20.7 NA 0.424 70-80% Liver 4.646753523 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CTD-3162L10.3 NA chr19 36378028 36378832 + 805 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-3162L10.3 NA 0.012 50-60% Testis 2.874840931 Normal NA NA boxplot ERLEC1P1 endoplasmic reticulum lectin 1 pseudogene 1 chr21 14143581 14144158 + 578 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ERLEC1P1 NA 0.059 20-30% NA NA CHD,CRC,HCC,Normal NA NA boxplot RP11-466F5.6 NA chr1 165698750 165709968 + 11219 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-466F5.6 NA 0.035 20-30% NA NA Breast_cancer,CRC,Normal,PAAD NA NA boxplot RP11-231E19.1 NA chr2 138599663 138602426 - 2764 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-231E19.1 NA 0.012 60-70% Testis 1.950742459 CRC,Normal NA NA boxplot RP11-227G15.10 NA chr17 32408013 32408309 + 297 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-227G15.10 exo_circ_014711 0.035 30-40% NA NA CRC,Normal NA NA boxplot CTD-2047H16.2 NA chr17 80315651 80316633 + 983 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2047H16.2 NA 0.235 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot DBIL5P diazepam binding inhibitor-like 5, pseudogene chr17 752660 755336 + 2677 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DBIL5P NA 0.094 40-50% Testis 2.749120935 CRC,HCC,Normal,PAAD NA NA boxplot CTD-2325A15.3 NA chr5 42892319 42892817 - 499 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2325A15.3 NA 0.035 70-80% Nerve 1.405781605 HCC,Normal,PAAD NA NA boxplot AK4P1 adenylate kinase 4 pseudogene 1 chr17 31345521 31346187 + 667 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AK4P1 NA 0.612 20-30% NA NA CHD,CRC,HCC,Normal,PAAD PAAD(up) NA boxplot RP11-159F24.5 NA chr5 43515274 43525310 + 10037 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-159F24.5 NA 0.024 50-60% NA NA Normal NA NA boxplot RP11-420B22.2 NA chr8 19001627 19001950 + 324 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-420B22.2 NA 0.012 90-100% Testis 4.160042084 HCC NA NA boxplot RP11-640M9.4 NA chr1 146459449 146461859 + 2411 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-640M9.4 NA 0.024 60-70% NA NA Breast_cancer,CRC NA NA boxplot SCARNA2 small Cajal body-specific RNA 2 chr1 109100193 109100619 + 427 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SCARNA2 NA 0.635 0-10% NA NA CHD,CRC,HCC,Normal,PAAD CRC(up),HCC(down),PAAD(up) NA boxplot CTD-2245F17.3 NA chr19 53197111 53214522 + 17412 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2245F17.3 exo_circ_032347,exo_circ_018377 0.929 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down) NA boxplot AC007038.7 NA chr2 210030733 210064356 + 33624 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC007038.7 exo_circ_032776 0.682 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-791G15.2 NA chr2 10767875 10770058 - 2184 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-791G15.2 NA 0.047 50-60% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot RCC2P4 regulator of chromosome condensation 2 pseudogene 4 chr3 126766434 126767475 - 1042 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RCC2P4 NA 0.012 20-30% NA NA Breast_cancer,HCC,PAAD NA NA boxplot RP4-570O12.2 NA chr6 88265158 88265511 + 354 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-570O12.2 NA 0.012 70-80% NA NA Normal NA NA boxplot RP11-14N7.2 NA chr1 144227030 144250288 - 23259 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-14N7.2 NA 0.224 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot AC079922.2 NA chr2 112621809 112622167 - 359 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC079922.2 NA 0.682 70-80% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP3-416H24.1 NA chr12 52245048 52247448 - 2401 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-416H24.1 NA 0.071 30-40% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot MIR4697HG MIR4697 host gene chr11 133896438 133901601 - 5164 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MIR4697HG NA 0.341 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up) NA boxplot RP11-715I4.1 NA chr3 13052967 13053122 - 156 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-715I4.1 NA 0.047 60-70% Brain 4.906892038 CRC,PAAD NA NA boxplot RP11-108M9.4 NA chr1 16888538 16889649 - 1112 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-108M9.4 NA 0.847 10-20% NA NA CRC,HCC,Normal,PAAD CHD(down) NA boxplot NME2P1 NME/NM23 nucleoside diphosphate kinase 2 pseudogene 1 chr12 120282303 120282716 + 414 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NME2P1 NA 0.259 80-90% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-90P13.1 NA chr7 161765 164972 - 3208 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-90P13.1 NA 0.059 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-474I16.8 NA chr1 161765325 161766227 - 903 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-474I16.8 NA 0.024 10-20% NA NA Normal NA NA boxplot RP11-654D12.2 NA chr12 89882665 89989289 + 106625 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-654D12.2 NA 0.141 30-40% Testis 4.153222705 CRC,HCC,Normal,PAAD NA NA boxplot RP11-76E17.4 NA chr15 93882082 93886743 + 4662 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-76E17.4 NA 0.071 40-50% NA NA HCC,Normal,PAAD NA NA boxplot RP11-702H23.6 NA chr11 74455348 74456825 + 1478 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-702H23.6 NA 0.388 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CTD-2240E14.4 NA chr19 10089032 10090377 - 1346 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2240E14.4 NA 0.153 40-50% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot KB-1460A1.5 NA chr8 101166805 101169629 - 2825 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KB-1460A1.5 NA 0.6 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot LA16c-366D1.3 NA chr16 547185 553847 - 6663 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LA16c-366D1.3 NA 0.294 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot FMO8P flavin containing monooxygenase 8 pseudogene chr1 166566178 166580705 + 14528 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FMO8P NA 0.012 0-10% Bladder 3.572578283 PAAD NA NA boxplot RP11-466H18.1 NA chr11 16974693 16975013 - 321 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-466H18.1 NA 0.929 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down) NA boxplot RP11-855O10.2 NA chr11 61588494 61607550 + 19057 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-855O10.2 NA 0.012 70-80% NA NA Breast_cancer,Normal NA NA boxplot RP11-882I15.1 NA chr11 85336075 85336572 - 498 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-882I15.1 NA 0.012 40-50% NA NA Breast_cancer,CRC NA NA boxplot LINC01381 long intergenic non-protein coding RNA 1381 chr2 25204313 25209202 + 4890 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01381 NA 0.012 70-80% NA NA Breast_cancer NA NA boxplot AC002467.7 NA chr7 107742817 107744581 - 1765 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC002467.7 NA 0.729 10-20% Testis 1.901390648 Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot AC005014.5 NA chr7 16583782 16586757 - 2976 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC005014.5 NA 0.059 70-80% Testis 1.195950044 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC004951.6 NA chr7 44004046 44007866 - 3821 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC004951.6 NA 0.365 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RASA4CP RAS p21 protein activator 4C, pseudogene chr7 44026951 44041892 - 14942 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RASA4CP NA 0.976 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-543F8.2 NA chr10 8400860 8461863 + 61004 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-543F8.2 NA 0.024 50-60% Salivary Gland 4.906892038 Normal NA NA boxplot AC004870.3 NA chr7 47000620 47079128 - 78509 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC004870.3 NA 0.012 60-70% Testis 4.906892038 CRC NA NA boxplot RP1-149C7.1 NA chr6 92387841 92388827 - 987 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-149C7.1 NA 0.012 80-90% Testis 4.906892038 Breast_cancer,CRC NA NA boxplot CTD-2555K7.2 NA chr14 22702611 22766562 - 63952 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2555K7.2 NA 0.082 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot LINC01047 long intergenic non-protein coding RNA 1047 chr13 89214847 89236890 - 22044 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01047 NA 0.012 90-100% Testis 4.906892038 PAAD NA NA boxplot RPL29P19 ribosomal protein L29 pseudogene 19 chr8 48384590 48385049 + 460 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL29P19 NA 0.082 40-50% NA NA HCC,Normal,PAAD NA NA boxplot DHRS4L1 dehydrogenase/reductase (SDR family) member 4 like 1 chr14 24036453 24051028 + 14576 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DHRS4L1 NA 0.224 20-30% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up) NA boxplot RP11-37J13.1 NA chr15 29233673 29235137 - 1465 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-37J13.1 NA 0.047 70-80% NA NA CRC,HCC,Normal NA NA boxplot RP11-798G7.6 NA chr17 45545804 45563230 + 17427 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-798G7.6 NA 0.318 70-80% Salivary Gland 3.603667693 CRC,HCC,Normal,PAAD NA NA boxplot CITF22-92A6.2 NA chr22 46006616 46010777 + 4162 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CITF22-92A6.2 NA 0.012 40-50% NA NA Breast_cancer NA NA boxplot RP4-576H24.2 NA chr20 1516759 1557653 - 40895 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-576H24.2 NA 0.576 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot ZBTB20-AS2 ZBTB20 antisense RNA 2 chr3 114684580 114687609 + 3030 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ZBTB20-AS2 NA 0.024 0-10% NA NA HCC,PAAD NA NA boxplot RP11-379P1.4 NA chr9 86132622 86132851 + 230 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-379P1.4 NA 0.012 40-50% Testis 4.906892038 Normal NA NA boxplot RP11-121C6.4 NA chr12 56413647 56414045 - 399 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-121C6.4 NA 0.012 70-80% NA NA NA NA NA boxplot RP11-263K4.1 NA chr12 82468456 82468948 + 493 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-263K4.1 NA 0.035 50-60% NA NA CRC,Normal,PAAD NA NA boxplot RP11-147I3.1 NA chr11 74876286 74920022 + 43737 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-147I3.1 NA 0.318 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-179B2.2 NA chr10 100911103 100912739 - 1637 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-179B2.2 NA 0.118 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-1102P22.3 NA chr16 17192863 17194232 - 1370 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1102P22.3 NA 0.024 30-40% NA NA Normal,PAAD NA NA boxplot CHCHD4P3 coiled-coil-helix-coiled-coil-helix domain containing 4 pseudogene 3 chr9 37434177 37434586 + 410 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CHCHD4P3 NA 0.012 60-70% NA NA Breast_cancer NA NA boxplot RLIMP1 ring finger protein, LIM domain interacting pseudogene 1 chr13 40618738 40621348 + 2611 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RLIMP1 NA 0.035 80-90% NA NA HCC,Normal,PAAD NA NA boxplot CTC-241F20.4 NA chr19 48262900 48271283 - 8384 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-241F20.4 NA 0.035 30-40% Thyroid 4.906892038 Breast_cancer,HCC,Normal,PAAD NA NA boxplot ZNF888 zinc finger protein 888 chr19 52915196 52923470 - 8275 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ZNF888 exo_circ_005639 0.835 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up),PAAD(down) NA boxplot RP11-21K12.2 NA chr12 128813186 128814750 - 1565 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-21K12.2 NA 0.141 10-20% NA NA Breast_cancer,CRC,Normal,PAAD NA NA boxplot AC012442.6 NA chr2 112590796 112591939 + 1144 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC012442.6 NA 0.259 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot LINC01521 long intergenic non-protein coding RNA 1521 chr22 31346777 31348719 + 1943 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01521 NA 0.518 20-30% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot C5orf17 chromosome 5 open reading frame 17 chr5 23951348 24178263 + 226916 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=C5orf17 NA 0.365 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD PAAD(up) NA boxplot RP11-274B21.12 NA chr7 128653690 128654019 - 330 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-274B21.12 NA 0.188 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP1-95L4.3 NA chr6 143327275 143327655 + 381 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-95L4.3 exo_circ_049731 0.012 60-70% NA NA HCC NA NA boxplot RP11-508N22.6 NA chr10 38161570 38161749 + 180 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-508N22.6 NA 0.071 50-60% Testis 3.977719977 CRC,HCC,Normal,PAAD NA NA boxplot PCDHGB8P protocadherin gamma subfamily B, 8 pseudogene chr5 141426286 141429158 + 2873 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PCDHGB8P NA 0.047 80-90% NA NA Breast_cancer,CRC,HCC,PAAD NA NA boxplot LA16c-390E6.5 NA chr16 1445343 1446519 + 1177 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LA16c-390E6.5 NA 0.165 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RPS2P32 ribosomal protein S2 pseudogene 32 chr7 23490473 23491364 + 892 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPS2P32 NA 0.482 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot AC010148.1 NA chr2 234834315 234913384 - 79070 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC010148.1 NA 0.024 50-60% NA NA Breast_cancer,CRC NA NA boxplot AP001429.1 NA chr21 37100814 37101343 + 530 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AP001429.1 NA 0.082 10-20% NA NA CRC,Normal,PAAD NA NA boxplot ATP1B1P1 ATPase, Na+/K+ transporting, beta 1 polypeptide pseudogene 1 chr4 42029209 42030123 + 915 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ATP1B1P1 NA 0.082 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP3-325F22.3 NA chr6 136629172 136647999 + 18828 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-325F22.3 NA 0.024 90-100% Testis 4.166795698 HCC,Normal NA NA boxplot IGF2BP2-AS1 IGF2BP2 antisense RNA 1 chr3 185712528 185729787 + 17260 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=IGF2BP2-AS1 NA 0.024 90-100% NA NA Breast_cancer,PAAD NA NA boxplot RP11-500C11.3 NA chr6 17706257 17707344 + 1088 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-500C11.3 NA 0.659 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down) NA boxplot CNOT10-AS1 CNOT10 antisense RNA 1 chr3 32730635 32737454 - 6820 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CNOT10-AS1 NA 0.047 90-100% NA NA HCC,Normal NA NA boxplot ARHGAP26-IT1 ARHGAP26 intronic transcript 1 chr5 143192500 143194166 + 1667 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ARHGAP26-IT1 NA 0.071 50-60% Testis 4.645366575 Breast_cancer,CRC,HCC,Normal NA NA boxplot CTD-2311M21.3 NA chr15 74365435 74371211 + 5777 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2311M21.3 NA 0.106 10-20% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot ATP5F1P5 ATP synthase, H+ transporting, mitochondrial Fo complex subunit B1 pseudogene 5 chr11 122960327 122961086 + 760 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ATP5F1P5 NA 0.412 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-255P5.2 NA chr13 102888858 102889834 + 977 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-255P5.2 NA 0.047 60-70% NA NA HCC,Normal,PAAD NA NA boxplot RP4-740C4.5 NA chr1 2350414 2352820 - 2407 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-740C4.5 NA 0.2 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RNF5P1 ring finger protein 5, E3 ubiquitin protein ligase pseudogene 1 chr8 38600661 38601200 - 540 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RNF5P1 NA 0.365 60-70% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-247L20.4 NA chr14 50326526 50327909 - 1384 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-247L20.4 NA 0.729 10-20% NA NA CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-153I24.4 NA chr13 108267320 108267734 + 415 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-153I24.4 NA 0.047 30-40% NA NA CRC,HCC,Normal NA NA boxplot CELF2-AS1 CELF2 antisense RNA 1 chr10 11316834 11319884 - 3051 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CELF2-AS1 NA 0.047 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC068831.16 NA chr15 91022766 91023200 + 435 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC068831.16 NA 0.106 50-60% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot CTD-2373N4.3 NA chr8 30552345 30553766 + 1422 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2373N4.3 NA 0.059 10-20% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot HAR1A highly accelerated region 1A (non-protein coding) chr20 63102205 63104386 + 2182 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HAR1A NA 0.424 20-30% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP13-631K18.5 NA chr11 12086891 12089441 + 2551 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP13-631K18.5 NA 0.012 80-90% Artery 2.953962632 Breast_cancer NA NA boxplot RP11-44F14.6 NA chr16 53487607 53489943 - 2337 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-44F14.6 NA 0.235 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot AC068831.3 NA chr15 90932586 90935130 - 2545 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC068831.3 NA 0.024 70-80% NA NA CRC,HCC,Normal NA NA boxplot RP11-278L15.6 NA chr3 149494660 149495995 + 1336 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-278L15.6 NA 0.024 90-100% Liver 3.292035131 Breast_cancer,PAAD NA NA boxplot MTND4LP30 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4L pseudogene 30 chr5 134928030 134928326 - 297 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MTND4LP30 NA 0.047 90-100% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot ACTG1P22 actin gamma 1 pseudogene 22 chr2 57755428 57766052 + 10625 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ACTG1P22 NA 0.012 90-100% NA NA Breast_cancer,CRC,HCC NA NA boxplot SPA17P1 sperm autoantigenic protein 17 pseudogene 1 chr10 75382393 75382844 - 452 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SPA17P1 NA 0.012 70-80% NA NA NA NA NA boxplot ABCC6P1 ATP binding cassette subfamily C member 6 pseudogene 1 (functional) chr16 18571162 18598328 + 27167 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ABCC6P1 NA 0.106 20-30% Liver 2.5434196 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot EEF1DP4 eukaryotic translation elongation factor 1 delta pseudogene 4 chr7 64862999 64864370 + 1372 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=EEF1DP4 exo_circ_004308 0.059 80-90% NA NA Breast_cancer,CRC,PAAD NA NA boxplot AL133168.3 NA chr14 96931367 96943580 + 12214 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AL133168.3 NA 0.082 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-299A16.1 NA chr12 80860955 80861508 - 554 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-299A16.1 NA 0.059 70-80% NA NA CRC,Normal NA NA boxplot RP11-406H21.2 NA chr10 17137336 17137585 - 250 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-406H21.2 NA 0.012 80-90% NA NA Normal NA NA boxplot CTD-3222D19.4 NA chr19 16610374 16612203 - 1830 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-3222D19.4 NA 0.129 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot SUCLG2P2 succinate-CoA ligase, GDP-forming, beta subunit pseudogene 2 chr12 94548241 94549536 + 1296 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SUCLG2P2 NA 0.941 20-30% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-758M4.4 NA chr8 74798784 74866939 - 68156 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-758M4.4 NA 0.012 60-70% NA NA HCC NA NA boxplot RP4-655J12.4 NA chr1 116423724 116478842 - 55119 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-655J12.4 NA 0.071 80-90% Kidney 1.972268151 Breast_cancer,CRC,Normal,PAAD NA NA boxplot GK-AS1 GK antisense RNA 1 chrX 30699998 30724174 - 24177 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GK-AS1 NA 0.012 80-90% NA NA HCC NA NA boxplot ABCA17P ATP binding cassette subfamily A member 17, pseudogene chr16 2339150 2426699 + 87550 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ABCA17P NA 0.129 40-50% Testis 2.573612461 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot TMEM92-AS1 TMEM92 antisense RNA 1 chr17 50281577 50287855 - 6279 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TMEM92-AS1 NA 0.012 40-50% NA NA Breast_cancer,HCC NA NA boxplot RP11-810P12.5 NA chr11 62077277 62082184 - 4908 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-810P12.5 NA 0.024 40-50% Testis 4.656489381 Breast_cancer,Normal NA NA boxplot RP3-483K16.4 NA chr6 53350158 53350705 + 548 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-483K16.4 NA 0.012 40-50% NA NA HCC NA NA boxplot RP11-108M12.3 NA chr14 57066260 57112660 - 46401 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-108M12.3 NA 0.012 30-40% NA NA Breast_cancer,HCC NA NA boxplot RP11-365O16.6 NA chr1 224219613 224228043 + 8431 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-365O16.6 NA 0.012 90-100% Skin 2.161899333 Breast_cancer,Normal NA NA boxplot KCNMB2-AS1 KCNMB2 antisense RNA 1 chr3 178526505 178860405 - 333901 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KCNMB2-AS1 exo_circ_027467,exo_circ_036984,exo_circ_043804 0.294 20-30% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-759A24.1 NA chr15 96285068 96289265 - 4198 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-759A24.1 NA 0.047 50-60% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot PPIAP6 peptidylprolyl isomerase A (cyclophilin A) pseudogene 6 chr14 68421698 68422196 - 499 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PPIAP6 NA 0.035 90-100% NA NA CHD,HCC,Normal,PAAD NA NA boxplot RP11-132N15.3 NA chr3 187958775 187976407 - 17633 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-132N15.3 NA 0.012 80-90% Heart 4.906892038 HCC NA NA boxplot LINC01136 long intergenic non-protein coding RNA 1136 chr1 203298758 203305309 - 6552 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01136 NA 0.282 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CTA-941F9.10 NA chr22 45657019 45680130 + 23112 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTA-941F9.10 NA 0.259 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD PAAD(up) NA boxplot RPS26P49 ribosomal protein S26 pseudogene 49 chr14 104830838 104831171 - 334 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPS26P49 NA 0.012 10-20% NA NA PAAD NA NA boxplot RP11-77E14.2 NA chr9 7786105 7786688 - 584 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-77E14.2 NA 0.024 30-40% NA NA CRC,Normal,PAAD NA NA boxplot AC004538.3 NA chr7 11180902 11520175 + 339274 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC004538.3 NA 0.506 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot LINC01352 long intergenic non-protein coding RNA 1352 chr1 220829255 220832429 + 3175 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01352 NA 0.094 10-20% NA NA CRC,Normal,PAAD NA NA boxplot AC144568.4 NA chr8 64091 64320 - 230 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC144568.4 NA 0.176 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot BTF3P10 basic transcription factor 3 pseudogene 10 chr6 149977922 149978416 + 495 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=BTF3P10 NA 0.506 80-90% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot AC006272.2 NA chr19 51839771 51840945 - 1175 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC006272.2 NA 0.024 70-80% NA NA Normal NA NA boxplot RP11-214J9.1 NA chr2 26101317 26102136 - 820 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-214J9.1 NA 0.012 90-100% NA NA Breast_cancer,CRC NA NA boxplot RP11-58K22.4 NA chr11 44606170 44608101 - 1932 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-58K22.4 NA 0.012 70-80% NA NA NA NA NA boxplot RP1-154J13.3 NA chrX 131492279 131492886 - 608 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-154J13.3 NA 0.012 90-100% NA NA Breast_cancer NA NA boxplot HMGN1P17 high mobility group nucleosome binding domain 1 pseudogene 17 chr5 56381781 56382075 + 295 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HMGN1P17 NA 0.012 90-100% Kidney 4.133309568 Normal NA NA boxplot RP11-513G11.3 NA chr3 194247648 194257772 + 10125 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-513G11.3 NA 0.024 80-90% Liver 4.733467407 Breast_cancer,CRC,HCC NA NA boxplot RP11-274J16.5 NA chr9 93094939 93095529 - 591 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-274J16.5 NA 0.012 50-60% Testis 4.906892038 CRC,HCC,Normal NA NA boxplot CTD-2073O6.1 NA chr5 78708734 78716082 - 7349 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2073O6.1 NA 0.012 60-70% NA NA NA NA NA boxplot MARK2P17 MAP/microtubule affinity-regulating kinase 2 pseudogene 17 chr3 128843564 128844404 - 841 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MARK2P17 NA 0.012 0-10% NA NA Breast_cancer,PAAD NA NA boxplot RP11-575F12.1 NA chr12 126915203 127060401 - 145199 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-575F12.1 NA 0.035 80-90% NA NA Breast_cancer,CRC,HCC NA NA boxplot CKS1BP3 CDC28 protein kinase regulatory subunit 1B pseudogene 3 chr5 62512246 62512482 - 237 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CKS1BP3 NA 0.729 30-40% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-845M18.7 NA chr12 52274647 52279156 - 4510 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-845M18.7 NA 0.012 90-100% Testis 4.030322271 Breast_cancer NA NA boxplot RP11-649A18.3 NA chr17 75130883 75133043 + 2161 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-649A18.3 NA 0.329 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-53I6.3 NA chr18 32091295 32092119 - 825 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-53I6.3 NA 0.176 40-50% NA NA CRC,Normal NA NA boxplot ALG1L6P asparagine-linked glycosylation 1-like 6, pseudogene chr3 75415070 75422143 + 7074 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ALG1L6P NA 0.271 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot FGF14-IT1 FGF14 intronic transcript 1 chr13 102292327 102394519 - 102193 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FGF14-IT1 NA 0.012 0-10% Testis 4.261529039 Breast_cancer,Normal NA NA boxplot AC084219.4 NA chr19 44105463 44113145 - 7683 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC084219.4 NA 0.553 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot ASNSP3 asparagine synthetase pseudogene 3 chr13 100062296 100063601 - 1306 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ASNSP3 NA 0.012 70-80% Testis 1.965421344 Breast_cancer NA NA boxplot LMO7DN-IT1 LMO7DN intronic transcript 1 chr13 75876886 75881127 + 4242 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LMO7DN-IT1 NA 0.024 60-70% NA NA PAAD NA NA boxplot PMS2P9 PMS1 homolog 2, mismatch repair system component pseudogene 9 chr7 77039944 77043776 + 3833 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PMS2P9 NA 0.529 50-60% NA NA CHD,CRC,HCC,Normal,PAAD CHD(up) NA boxplot RHOQP3 ras homolog family member Q pseudogene 3 chr2 130212870 130213490 - 621 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RHOQP3 NA 0.847 20-30% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot AC087499.5 NA chr17 20612667 20614008 + 1342 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC087499.5 NA 0.024 90-100% Testis 4.906892038 Breast_cancer,CRC,HCC,Normal NA NA boxplot RP11-318A15.2 NA chr17 76671942 76673658 + 1717 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-318A15.2 NA 0.188 30-40% Testis 1.220697994 CRC,HCC,Normal,PAAD NA NA boxplot RPL5P12 ribosomal protein L5 pseudogene 12 chr4 98025390 98026240 + 851 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL5P12 NA 0.129 90-100% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP4-799P18.3 NA chr1 234268583 234272500 - 3918 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-799P18.3 NA 0.012 90-100% Testis 4.882772785 HCC NA NA boxplot RP13-766D20.2 NA chr17 81514047 81527776 + 13730 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP13-766D20.2 NA 0.082 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-507B12.2 NA chr15 61298791 61635449 - 336659 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-507B12.2 NA 0.012 20-30% NA NA Breast_cancer,PAAD NA NA boxplot BLZF2P basic leucine zipper nuclear factor 2 pseudogene chr14 68867857 68869951 - 2095 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=BLZF2P NA 0.035 40-50% NA NA Breast_cancer,CHD,Normal NA NA boxplot AL355480.2 NA chr1 45592722 45592814 - 93 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AL355480.2 NA 0.012 60-70% NA NA PAAD NA NA boxplot LINC01548 long intergenic non-protein coding RNA 1548 chr21 33165470 33170649 - 5180 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01548 NA 0.012 60-70% NA NA Breast_cancer,PAAD NA NA boxplot RP1-80N2.2 NA chr6 6692744 6711002 - 18259 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-80N2.2 NA 0.071 50-60% Kidney 1.065850964 CRC,HCC,Normal,PAAD NA NA boxplot RP11-803D5.4 NA chr2 111266868 111267473 - 606 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-803D5.4 NA 0.082 20-30% Thyroid 2.989406716 Breast_cancer,CRC,Normal,PAAD NA NA boxplot RP11-295K2.3 NA chr1 186435161 186470291 + 35131 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-295K2.3 NA 0.482 10-20% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down) NA boxplot RP11-135N5.3 NA chr17 2639297 2642418 + 3122 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-135N5.3 NA 0.212 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP1-310O13.7 NA chr20 32027753 32031575 - 3823 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-310O13.7 NA 0.141 60-70% Spleen 1.266448201 Breast_cancer,HCC,Normal,PAAD NA NA boxplot RP11-441F2.2 NA chr16 56300616 56302904 + 2289 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-441F2.2 NA 0.047 70-80% Testis 4.350417217 Breast_cancer,Normal,PAAD NA NA boxplot HLA-W major histocompatibility complex, class I, W (pseudogene) chr6 29956596 29958570 + 1975 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HLA-W NA 0.024 80-90% NA NA Breast_cancer,CRC NA NA boxplot AF064860.5 NA chr21 39630271 39726085 + 95815 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AF064860.5 NA 0.012 70-80% NA NA NA NA NA boxplot CTC-546K23.1 NA chr5 121199704 121357398 + 157695 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-546K23.1 NA 0.012 60-70% Testis 4.762799577 CRC NA NA boxplot RP11-118F19.1 NA chr16 85580009 85583571 - 3563 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-118F19.1 NA 0.012 90-100% NA NA Breast_cancer,CRC NA NA boxplot SLC25A6P3 solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6 pseudogene 3 chr1 51709062 51709940 + 879 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SLC25A6P3 exo_circ_038096 0.047 70-80% Testis 4.906892038 CRC,Normal NA NA boxplot RP11-358B23.7 NA chr17 42272069 42275571 - 3503 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-358B23.7 NA 0.235 40-50% NA NA Breast_cancer,CRC,Normal,PAAD NA NA boxplot RP13-582L3.4 NA chr4 8858715 8860827 - 2113 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP13-582L3.4 NA 0.012 80-90% Testis 4.906892038 NA NA NA boxplot RP11-18B3.2 NA chr9 105758164 105760755 + 2592 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-18B3.2 NA 0.141 20-30% NA NA CRC,Normal,PAAD NA NA boxplot CTB-180A7.6 NA chr19 6386762 6390400 - 3639 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTB-180A7.6 NA 0.012 60-70% NA NA Breast_cancer,CRC,Normal NA NA boxplot RP11-74C1.4 NA chr1 151540516 151561855 + 21340 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-74C1.4 NA 0.047 60-70% NA NA Breast_cancer,CRC,Normal,PAAD NA NA boxplot FIGNL2 fidgetin-like 2 chr12 51820459 51822415 - 1957 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FIGNL2 NA 0.247 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-705O24.1 NA chr8 61785047 61944180 + 159134 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-705O24.1 NA 0.094 10-20% Testis 4.886948559 Breast_cancer,Normal NA NA boxplot PDCD5P1 programmed cell death 5 pseudogene 1 chr12 19413153 19413461 + 309 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PDCD5P1 NA 0.012 90-100% NA NA HCC NA NA boxplot SPCS2P4 signal peptidase complex subunit 2 homolog (S. cerevisiae) pseudogene 4 chr1 28095742 28096422 - 681 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SPCS2P4 NA 0.976 0-10% NA NA CHD,CRC,HCC,Normal,PAAD CHD(down),CRC(down),PAAD(down) NA boxplot RP11-459D22.1 NA chr12 18424663 18425140 + 478 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-459D22.1 NA 0.012 10-20% Stomach 2.512785476 Normal NA NA boxplot GFOD1-AS1 GFOD1 antisense RNA 1 chr6 13486294 13486852 + 559 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GFOD1-AS1 NA 0.282 70-80% NA NA CRC,HCC,Normal,PAAD NA NA boxplot LINC00381 long intergenic non-protein coding RNA 381 chr13 74419173 74435159 + 15987 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00381 exo_circ_001344 0.071 10-20% Testis 4.834955958 Breast_cancer,CRC,HCC,Normal NA NA boxplot RP11-142L16.2 NA chr10 22693953 22694639 - 687 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-142L16.2 exo_circ_004644,exo_circ_041650 0.165 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CTD-2135D7.5 NA chr16 14009280 14016016 - 6737 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2135D7.5 NA 0.8 10-20% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(down) NA boxplot RP11-88H9.2 NA chr1 111989770 111998842 + 9073 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-88H9.2 NA 0.647 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),PAAD(down) NA boxplot LRRC37A11P leucine-rich repeat containing 37 member A11, pseudogene chr17 39027277 39053205 + 25929 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LRRC37A11P NA 0.024 20-30% Testis 3.691781164 Breast_cancer,CHD NA NA boxplot CBX3P2 chromobox 3 pseudogene 2 chr18 2652170 2655395 - 3226 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CBX3P2 NA 0.4 20-30% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot CTA-445C9.14 NA chr22 26512537 26514568 + 2032 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTA-445C9.14 NA 0.412 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC009477.7 NA chr2 131181153 131181369 - 217 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC009477.7 NA 0.012 70-80% Testis 4.906892038 Breast_cancer,Normal NA NA boxplot RPL12P18 ribosomal protein L12 pseudogene 18 chr2 84874696 84875020 + 325 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL12P18 NA 0.012 50-60% Testis 4.906892038 CRC NA NA boxplot RP11-213H15.4 NA chr5 91313057 91314402 - 1346 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-213H15.4 NA 0.459 50-60% Whole Blood 2.916547012 CRC,HCC,Normal,PAAD NA NA boxplot RP11-467L19.16 NA chr15 20642799 20643448 - 650 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-467L19.16 NA 0.012 90-100% NA NA Breast_cancer,Normal NA NA boxplot RP11-333I13.1 NA chr2 46777783 46780245 + 2463 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-333I13.1 NA 0.118 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CTD-2049O4.2 NA chr16 27687182 27687522 + 341 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2049O4.2 NA 0.035 60-70% NA NA Normal,PAAD NA NA boxplot RP4-607J2.1 NA chr7 2393847 2394131 - 285 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-607J2.1 NA 0.012 90-100% NA NA NA NA NA boxplot CTD-2574D22.2 NA chr16 29926836 29928933 + 2098 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2574D22.2 NA 0.659 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(up) NA boxplot DUX4L26 double homeobox 4 like 26 chr3 75668931 75670185 + 1255 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DUX4L26 NA 0.012 20-30% NA NA Breast_cancer,HCC NA NA boxplot ZDHHC20P4 zinc finger, DHHC-type containing 20 pseudogene 4 chr13 68985058 68986064 + 1007 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ZDHHC20P4 NA 0.518 50-60% Testis 1.906664487 CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-532F6.2 NA chr6 669081 670307 - 1227 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-532F6.2 NA 0.118 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot MTCO3P42 MT-CO3 pseudogene 42 chr4 49548918 49549435 - 518 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MTCO3P42 NA 0.012 70-80% NA NA PAAD NA NA boxplot AP001471.1 NA chr21 46093264 46097530 - 4267 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AP001471.1 NA 0.024 0-10% NA NA Breast_cancer,HCC,Normal NA NA boxplot RP11-51L5.3 NA chr17 62231470 62247153 - 15684 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-51L5.3 NA 0.106 80-90% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CTB-41I6.1 uncharacterized LOC101928235 chr17 8965896 8967070 + 1175 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTB-41I6.1 NA 0.741 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),PAAD(up) NA boxplot MAPKAPK5-AS1 MAPKAPK5 antisense RNA 1 chr12 111839764 111842902 - 3139 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MAPKAPK5-AS1 NA 0.988 0-10% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot BEND3P3 BEN domain containing 3 pseudogene 3 chr10 79682997 79685436 + 2440 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=BEND3P3 NA 0.082 70-80% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot FAM157C family with sequence similarity 157 member C chr16 90102271 90186204 + 83934 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FAM157C NA 0.871 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(up),HCC(up),PAAD(up) NA boxplot RP3-348I23.2 NA chr6 20756103 20800694 - 44592 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-348I23.2 NA 0.024 10-20% Testis 4.906892038 Normal NA NA boxplot TERF1P4 telomeric repeat binding factor (NIMA-interacting) 1 pseudogene 4 chrX 83748825 83749939 - 1115 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TERF1P4 NA 0.341 70-80% NA NA CRC,HCC,Normal,PAAD NA NA boxplot VPS13A-AS1 VPS13A antisense RNA 1 chr9 77176756 77177994 - 1239 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=VPS13A-AS1 NA 0.082 90-100% Testis 4.906892038 Breast_cancer,CRC,HCC,Normal NA NA boxplot HYDIN2 HYDIN2, axonemal central pair apparatus protein (pseudogene) chr1 146547367 146914294 + 366928 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HYDIN2 NA 0.235 20-30% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot POT1-AS1 POT1 antisense RNA 1 chr7 124929873 125179315 + 249443 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=POT1-AS1 exo_circ_042391,exo_circ_055339 0.718 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down),HCC(down) NA boxplot RP11-84D1.1 NA chr1 24961345 24963097 + 1753 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-84D1.1 NA 0.129 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot XXbac-BPG299F13.17 NA chr6 31195200 31198037 - 2838 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=XXbac-BPG299F13.17 NA 0.765 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RPL17P50 ribosomal protein L17 pseudogene 50 chr10 73005833 73006595 - 763 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL17P50 NA 0.259 70-80% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot AC093382.1 NA chr2 215939308 215941719 - 2412 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC093382.1 NA 0.047 80-90% NA NA CRC,HCC,Normal NA NA boxplot RP4-806M20.3 NA chr20 58833809 58836529 - 2721 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-806M20.3 NA 0.012 40-50% NA NA Breast_cancer NA NA boxplot RP11-497H17.1 NA chr17 82918282 82918785 + 504 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-497H17.1 NA 0.071 60-70% NA NA Breast_cancer,CRC,Normal NA NA boxplot LINC00449 long intergenic non-protein coding RNA 449 chr13 99499727 99501052 - 1326 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00449 NA 0.024 40-50% Testis 1.540449431 Breast_cancer,CRC,Normal NA NA boxplot E2F6P3 E2F transcription factor 6 pseudogene 3 chr22 21268161 21268903 + 743 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=E2F6P3 NA 0.294 70-80% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot CTD-2555O16.1 NA chr14 64358768 64379318 - 20551 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2555O16.1 NA 0.118 80-90% Testis 4.36262533 CRC,Normal,PAAD NA NA boxplot RP11-234B24.5 NA chr12 4601991 4603420 - 1430 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-234B24.5 NA 0.012 40-50% Testis 4.664038666 NA NA NA boxplot RP11-927P21.12 NA chr17 64905883 64906018 - 136 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-927P21.12 NA 0.035 80-90% NA NA CRC NA NA boxplot RP11-843P14.2 NA chr5 176347941 176353584 + 5644 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-843P14.2 NA 0.376 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-498C9.13 NA chr17 81932398 81933058 + 661 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-498C9.13 NA 0.024 70-80% NA NA Breast_cancer,HCC,Normal NA NA boxplot NBAT1 neuroblastoma associated transcript 1 chr6 22134957 22147193 - 12237 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NBAT1 NA 0.094 0-10% NA NA CHD,HCC,Normal CHD(up) NA boxplot CTD-2326C4.1 NA chr16 72973374 72973832 - 459 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2326C4.1 NA 0.012 90-100% NA NA CRC NA NA boxplot GTSE1-AS1 GTSE1 antisense RNA 1 (head to head) chr22 46295143 46296660 - 1518 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GTSE1-AS1 NA 0.235 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-131M6.1 NA chrY 11144250 11144492 + 243 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-131M6.1 NA 0.012 90-100% NA NA Normal NA NA boxplot RP11-559N14.6 NA chr17 78522247 78522828 + 582 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-559N14.6 NA 0.012 60-70% NA NA Breast_cancer,Normal NA NA boxplot RP11-286O1.1 NA chr9 42231811 42354454 + 122644 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-286O1.1 NA 0.012 90-100% NA NA Breast_cancer,HCC NA NA boxplot CTD-2006C1.12 NA chr19 11939959 11953381 + 13423 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2006C1.12 NA 0.376 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot BCRP6 breakpoint cluster region pseudogene 6 chr22 21290760 21294586 - 3827 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=BCRP6 NA 0.024 80-90% Testis 4.906892038 PAAD NA NA boxplot PEG13 NA chr8 140094894 140100560 - 5667 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PEG13 NA 0.553 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot HNRNPCP7 heterogeneous nuclear ribonucleoprotein C pseudogene 7 chr7 64500825 64501729 + 905 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HNRNPCP7 NA 0.035 30-40% NA NA CHD,Normal NA NA boxplot RP1-178F10.1 NA chr17 18268080 18268828 + 749 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-178F10.1 NA 0.024 70-80% NA NA Breast_cancer,Normal NA NA boxplot RP11-158L12.4 NA chr12 125138245 125141711 + 3467 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-158L12.4 NA 0.094 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CTC-548K16.5 NA chr19 14402717 14408723 - 6007 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-548K16.5 NA 0.212 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-94P14.1 NA chr15 77204578 77205100 + 523 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-94P14.1 NA 0.012 90-100% NA NA Normal NA NA boxplot CDCA4P4 cell division cycle associated 4 pseudogene 4 chr1 207762584 207763263 + 680 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CDCA4P4 NA 0.129 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP3-395M20.7 NA chr1 2566410 2569888 + 3479 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-395M20.7 NA 0.176 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP5-1142A6.7 NA chr16 88741631 88742367 + 737 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-1142A6.7 NA 0.035 80-90% Testis 3.576178598 CRC,Normal NA NA boxplot RP11-734E19.1 NA chr12 76757191 76757914 + 724 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-734E19.1 NA 0.129 90-100% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot GLULP4 glutamate-ammonia ligase (glutamine synthetase) pseudogene 4 chr9 34917175 34918296 + 1122 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GLULP4 NA 0.012 80-90% Testis 1.414321083 Breast_cancer,Normal NA NA boxplot MTND3P12 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 3 pseudogene 12 chr15 58150635 58150962 + 328 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MTND3P12 NA 0.012 60-70% NA NA CRC,Normal,PAAD NA NA boxplot FBXL21 F-box and leucine-rich repeat protein 21 (gene/pseudogene) chr5 135930317 135951591 + 21275 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FBXL21 NA 0.024 40-50% NA NA Breast_cancer,CRC,HCC NA NA boxplot LLNLF-173C4.2 NA chr19 197310 198066 - 757 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LLNLF-173C4.2 NA 0.153 70-80% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-574K11.26 NA chr10 73791218 73791490 + 273 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-574K11.26 NA 0.047 90-100% NA NA HCC,Normal,PAAD NA NA boxplot RP11-289I10.2 NA chr1 145233001 145233519 + 519 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-289I10.2 NA 0.871 10-20% NA NA CRC,HCC,Normal,PAAD CHD(down),PAAD(down) NA boxplot RP11-491H19.1 NA chr10 61781745 61821246 - 39502 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-491H19.1 NA 0.035 80-90% Testis 4.67970809 CRC NA NA boxplot RP5-940F7.2 NA chr1 235942553 235943805 - 1253 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-940F7.2 exo_circ_009540 0.012 70-80% NA NA HCC NA NA boxplot RP1-78B3.1 NA chr22 35992321 36000469 + 8149 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-78B3.1 NA 0.012 80-90% NA NA Breast_cancer,HCC NA NA boxplot RP11-16E18.3 NA chr8 63215981 63218034 + 2054 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-16E18.3 NA 0.259 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot AP000347.4 NA chr22 23638492 23640762 - 2271 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AP000347.4 NA 0.412 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-725P16.2 NA chr2 132345616 132347297 - 1682 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-725P16.2 NA 0.012 0-10% NA NA PAAD NA NA boxplot RP11-110I1.13 NA chr11 119067374 119067698 - 325 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-110I1.13 NA 0.082 70-80% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP1-137D17.1 NA chr6 169369998 169388385 - 18388 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-137D17.1 NA 0.012 70-80% NA NA Breast_cancer,HCC NA NA boxplot RP11-932O9.10 NA chr15 30648797 30649529 + 733 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-932O9.10 NA 0.047 40-50% NA NA CRC,PAAD NA NA boxplot HIGD1AP1 HIG1 hypoxia inducible domain family member 1A pseudogene 1 chr12 53142053 53142327 + 275 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HIGD1AP1 NA 0.153 80-90% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot CHEK2P2 checkpoint kinase 2 pseudogene 2 chr15 20282744 20291586 + 8843 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CHEK2P2 NA 0.012 90-100% Testis 4.780716697 Breast_cancer,CRC,HCC NA NA boxplot RPL5P13 ribosomal protein L5 pseudogene 13 chr4 142286917 142287625 - 709 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL5P13 exo_circ_054481 0.082 60-70% NA NA CRC,Normal,PAAD NA NA boxplot RP11-396C23.2 NA chr1 226083639 226090292 + 6654 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-396C23.2 NA 0.071 30-40% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot AC009228.1 NA chr2 24214381 24221516 + 7136 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC009228.1 NA 0.176 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RPL12P16 ribosomal protein L12 pseudogene 16 chr2 203190780 203191277 + 498 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL12P16 NA 1 0-10% NA NA CHD,CRC,HCC,Normal,PAAD CRC(down) NA boxplot GOLGA2P7 golgin A2 pseudogene 7 chr15 84199311 84230136 - 30826 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GOLGA2P7 NA 0.624 10-20% NA NA CHD,CRC,HCC,Normal,PAAD PAAD(up) NA boxplot RP1-90G24.11 NA chr22 32284683 32285131 + 449 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-90G24.11 NA 0.012 80-90% Prostate 2.151076461 CRC NA NA boxplot PP14571 uncharacterized LOC100130449 chr2 240449315 240456714 - 7400 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PP14571 NA 0.012 90-100% NA NA Breast_cancer NA NA boxplot KRT8P37 keratin 8 pseudogene 37 chr10 8513687 8515106 - 1420 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KRT8P37 NA 0.047 90-100% Testis 4.175979354 Breast_cancer,HCC,PAAD NA NA boxplot CTC-513N18.7 NA chr19 20553792 20661583 - 107792 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-513N18.7 NA 0.929 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down) NA boxplot AC004899.3 NA chr7 48846426 48852898 - 6473 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC004899.3 NA 0.541 40-50% Testis 4.724871814 CRC,HCC,Normal,PAAD NA NA boxplot RP11-535A19.2 NA chr11 75803431 75815406 - 11976 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-535A19.2 NA 0.176 40-50% Testis 3.573065449 CRC,HCC,Normal,PAAD NA NA boxplot RP11-486G15.2 NA chr1 84076331 84077931 - 1601 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-486G15.2 NA 0.082 80-90% NA NA CRC,Normal,PAAD NA NA boxplot RP11-269C23.4 NA chr13 44432144 44432678 + 535 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-269C23.4 NA 0.012 90-100% NA NA Normal NA NA boxplot CTB-113P19.1 uncharacterized LOC101927096 chr5 151676945 151724782 + 47838 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTB-113P19.1 NA 0.682 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot SGO1P2 NA chr7 52891837 52897807 - 5971 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SGO1P2 NA 0.012 10-20% NA NA PAAD NA NA boxplot RP11-6N17.6 NA chr17 47946802 47948275 - 1474 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-6N17.6 NA 0.212 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot KCCAT333 renal clear cell carcinoma-associated transcript 333 chr7 17374867 17467256 + 92390 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KCCAT333 NA 0.047 30-40% NA NA HCC,PAAD NA NA boxplot RP11-848P1.3 NA chr17 30964935 30965500 - 566 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-848P1.3 NA 0.035 50-60% NA NA Normal NA NA boxplot ARPC3P1 actin related protein 2/3 complex subunit 3 pseudogene 1 chr20 49134480 49135012 + 533 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ARPC3P1 NA 0.882 50-60% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-543C4.1 NA chr14 99604556 99625740 + 21185 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-543C4.1 NA 0.024 70-80% NA NA Breast_cancer,CRC,Normal NA NA boxplot RP11-369E15.4 NA chr8 20953127 20968904 + 15778 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-369E15.4 NA 0.059 50-60% Testis 4.597500579 CRC,Normal NA NA boxplot RP11-547D13.1 NA chr15 55171972 55178175 - 6204 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-547D13.1 NA 0.424 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CTC-548H10.2 NA chr5 127651693 127664029 - 12337 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-548H10.2 NA 0.024 0-10% Testis 4.106179548 Normal,PAAD NA NA boxplot AP000692.9 NA chr21 36360630 36362040 + 1411 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AP000692.9 NA 0.188 30-40% NA NA CRC,HCC,Normal NA NA boxplot RPL7L1P5 ribosomal protein L7 like 1 pseudogene 5 chr17 44365014 44365751 - 738 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL7L1P5 NA 0.024 50-60% NA NA CRC NA NA boxplot RP11-570L15.1 NA chr2 143518867 143598002 - 79136 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-570L15.1 NA 0.012 80-90% NA NA CRC NA NA boxplot RPL15P3 ribosomal protein L15 pseudogene 3 chr6 12514110 12514724 + 615 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL15P3 NA 1 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CRC(down) NA boxplot RP13-726E6.2 NA chr11 3429758 3581211 - 151454 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP13-726E6.2 NA 0.388 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-335L23.4 NA chr4 183075480 183076033 - 554 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-335L23.4 NA 0.012 80-90% Testis 1.860129602 NA NA NA boxplot RP11-50D16.4 NA chr13 39053072 39221927 + 168856 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-50D16.4 exo_circ_056805 0.012 90-100% NA NA CRC NA NA boxplot AC072062.3 NA chr2 215004782 215085488 + 80707 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC072062.3 exo_circ_053680 0.047 50-60% Testis 3.588004292 CRC,Normal NA NA boxplot PPIAP30 peptidylprolyl isomerase A (cyclophilin A) pseudogene 30 chr10 15154802 15155320 - 519 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PPIAP30 NA 0.035 20-30% Testis 2.977064419 Normal,PAAD NA NA boxplot DDX11L16 DEAD/H-box helicase 11 like 16 chrY 57212184 57214397 - 2214 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DDX11L16 NA 0.718 0-10% Testis 2.66321689 CHD,CRC,HCC,Normal,PAAD CRC(up),HCC(up),PAAD(up) NA boxplot AC092839.3 NA chr2 54516048 54540697 - 24650 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC092839.3 NA 0.024 70-80% Testis 4.906892038 HCC NA NA boxplot HMGN2P17 high mobility group nucleosomal binding domain 2 pseudogene 17 chr1 8893409 8894151 + 743 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HMGN2P17 NA 0.035 90-100% Testis 4.092211486 CHD NA NA boxplot DYX1C1-CCPG1 DYX1C1-CCPG1 readthrough (NMD candidate) chr15 55355248 55498360 - 143113 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DYX1C1-CCPG1 exo_circ_013129,exo_circ_024786,exo_circ_037603 1 0-10% NA NA CHD,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-275I14.4 NA chr1 226148003 226155071 + 7069 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-275I14.4 NA 0.435 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-1149M10.2 NA chr8 81154279 81164599 + 10321 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1149M10.2 NA 0.176 10-20% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot SIGLEC16 sialic acid binding Ig-like lectin 16 (gene/pseudogene) chr19 49969673 49975814 + 6142 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SIGLEC16 NA 0.494 40-50% Ovary 2.150184595 Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-324O2.3 NA chr10 112395813 112425589 - 29777 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-324O2.3 NA 0.282 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot LINC00415 long intergenic non-protein coding RNA 415 chr13 26052276 26053385 - 1110 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00415 NA 0.012 50-60% Testis 4.748176517 NA NA NA boxplot SNAPC5P1 small nuclear RNA activating complex polypeptide 5 pseudogene 1 chr6 6347081 6347381 - 301 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SNAPC5P1 NA 0.271 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP4-784A16.3 NA chr1 53291791 53292138 - 348 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-784A16.3 NA 0.024 30-40% Testis 4.13030397 Breast_cancer,PAAD NA NA boxplot RP11-438L19.1 NA chr2 183214319 183215400 + 1082 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-438L19.1 NA 0.035 10-20% NA NA Normal,PAAD NA NA boxplot MIR217HG MIR217 host gene chr2 55963191 56047326 - 84136 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MIR217HG NA 0.012 60-70% NA NA HCC,Normal NA NA boxplot CTD-2086L14.1 NA chr19 56217168 56217777 - 610 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2086L14.1 NA 0.012 60-70% Testis 4.906892038 Breast_cancer NA NA boxplot RP11-78L16.1 NA chr13 55062945 55161490 + 98546 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-78L16.1 NA 0.012 60-70% NA NA NA NA NA boxplot RP11-95P2.3 NA chr16 4180117 4183515 - 3399 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-95P2.3 NA 0.024 30-40% Testis 1.126991747 PAAD NA NA boxplot RP11-297K7.1 NA chr3 188989382 188990135 - 754 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-297K7.1 NA 0.012 40-50% NA NA PAAD NA NA boxplot LINC01239 long intergenic non-protein coding RNA 1239 chr9 22646200 22824213 + 178014 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01239 exo_circ_044928 0.094 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CTC-498J12.3 NA chr5 69113112 69136394 - 23283 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-498J12.3 exo_circ_049593 0.2 70-80% Adrenal Gland 3.849823271 CRC,HCC,Normal,PAAD NA NA boxplot CTD-2270L9.2 NA chr16 23446446 23447282 - 837 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2270L9.2 NA 0.035 80-90% NA NA Breast_cancer,CRC,Normal NA NA boxplot UBE2R2-AS1 UBE2R2 antisense RNA 1 chr9 33785950 33818795 - 32846 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=UBE2R2-AS1 exo_circ_050417 0.118 70-80% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RHOT1P2 ras homolog family member T1 pseudogene 2 chr21 13936993 13937325 - 333 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RHOT1P2 NA 0.506 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-388P9.2 NA chr10 60050668 60060743 + 10076 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-388P9.2 NA 0.106 30-40% NA NA HCC,Normal,PAAD NA NA boxplot RP11-481H12.1 NA chr10 113482616 113483113 + 498 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-481H12.1 NA 0.012 90-100% NA NA CRC NA NA boxplot RP11-1102P22.1 NA chr16 17227023 17228000 - 978 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1102P22.1 NA 0.188 70-80% NA NA CRC,HCC,Normal,PAAD NA NA boxplot AC005281.2 NA chr7 12570125 12571392 - 1268 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC005281.2 NA 0.012 50-60% Kidney 1.946556203 Breast_cancer,PAAD NA NA boxplot RP11-432J24.5 NA chr10 132511626 132518191 - 6566 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-432J24.5 NA 0.318 50-60% Heart 2.826298029 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP6-74O6.2 NA chr1 147993862 148014956 - 21095 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP6-74O6.2 NA 0.129 40-50% Brain 4.906892038 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-344J7.3 NA chr6 43803193 43842625 + 39433 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-344J7.3 NA 0.024 50-60% NA NA Breast_cancer,CRC,Normal NA NA boxplot CTB-191K22.5 NA chr19 50310022 50310539 - 518 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTB-191K22.5 NA 0.024 50-60% NA NA Breast_cancer,HCC,PAAD NA NA boxplot RP11-357N13.6 NA chr16 53991012 53994454 + 3443 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-357N13.6 exo_circ_034508 0.129 20-30% NA NA CRC,Normal,PAAD NA NA boxplot RP11-863P13.5 NA chr16 88079161 88087383 - 8223 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-863P13.5 NA 0.024 20-30% Spleen 2.060367536 HCC,Normal,PAAD NA NA boxplot RP5-1173A5.1 NA chr11 3336721 3340630 + 3910 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-1173A5.1 NA 0.012 70-80% NA NA Breast_cancer,CRC NA NA boxplot MFAP1P1 microfibrillar associated protein 1 pseudogene 1 chr13 30541643 30542897 - 1255 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MFAP1P1 NA 0.106 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC016582.2 NA chr19 37823722 37855215 - 31494 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC016582.2 NA 0.035 10-20% Testis 1.732044336 Breast_cancer,HCC,Normal NA NA boxplot PTP4A1P1 protein tyrosine phosphatase type IVA, member 1 pseudogene 1 chr2 158065545 158066059 + 515 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PTP4A1P1 NA 0.012 90-100% NA NA CRC NA NA boxplot CPEB2-AS1 CPEB2 antisense RNA 1 (head to head) chr4 14909961 15002045 - 92085 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CPEB2-AS1 exo_circ_054495 0.247 30-40% Testis 3.414542185 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot LINC01013 long intergenic non-protein coding RNA 1013 chr6 132131915 132169374 + 37460 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01013 exo_circ_026465,exo_circ_042321,exo_circ_049718,exo_circ_055091 0.553 10-20% Testis 1.939389038 Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),PAAD(down) NA boxplot TUBB8P8 tubulin beta 8 class VIII pseudogene 8 chr3 198119721 198120778 + 1058 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TUBB8P8 NA 0.141 60-70% Testis 3.9656135 CRC,HCC,Normal,PAAD NA NA boxplot CDR1-AS CDR1 antisense RNA chrX 140783176 140784660 + 1485 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CDR1-AS NA 0.918 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(up),HCC(up),PAAD(up) NA boxplot LINC00477 long intergenic non-protein coding RNA 477 chr12 24566964 24584168 - 17205 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00477 NA 0.012 0-10% Testis 4.906892038 Breast_cancer,Normal,PAAD NA NA boxplot UNC93B6 unc-93 homolog B6 pseudogene (C. elegans) chr11 71603260 71608040 + 4781 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=UNC93B6 NA 0.047 90-100% Brain 4.906892038 Breast_cancer,CRC,HCC,Normal NA NA boxplot AC004702.2 NA chr17 20185082 20322973 + 137892 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC004702.2 NA 0.024 80-90% NA NA Breast_cancer,CRC NA NA boxplot RP11-706O15.1 NA chrX 3817528 3843857 - 26330 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-706O15.1 NA 0.929 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP3-470L22.1 NA chr6 6758276 6759291 - 1016 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-470L22.1 NA 0.047 60-70% Testis 4.809829843 Breast_cancer,CRC,HCC NA NA boxplot bP-2171C21.4 NA chr21 9026821 9027329 - 509 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=bP-2171C21.4 NA 0.024 70-80% NA NA Breast_cancer,HCC,PAAD NA NA boxplot NAPSB napsin B aspartic peptidase, pseudogene chr19 50333796 50344767 - 10972 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NAPSB NA 0.965 0-10% Spleen 2.150651033 Breast_cancer,CHD,CRC,HCC,Normal,PAAD HCC(down) NA boxplot RP11-53O19.1 NA chr5 44744900 44808777 - 63878 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-53O19.1 NA 0.529 10-20% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP1-261D10.2 NA chr14 71292729 71321814 - 29086 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-261D10.2 NA 0.082 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP4-575N6.4 NA chr1 101235683 101236528 - 846 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-575N6.4 NA 0.612 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP3-461P17.10 NA chr20 45445431 45448580 + 3150 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-461P17.10 NA 0.082 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot HHATL-AS1 HHATL antisense RNA 1 chr3 42702653 42706776 + 4124 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HHATL-AS1 NA 0.012 10-20% NA NA Breast_cancer,HCC NA NA boxplot CTD-3073N11.9 NA chr19 51519731 51520260 + 530 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-3073N11.9 NA 0.118 70-80% NA NA HCC,Normal,PAAD NA NA boxplot CTC-250I14.6 NA chr19 13153071 13154193 - 1123 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-250I14.6 NA 0.635 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot CUBNP1 cubilin (intrinsic factor-cobalamin receptor) pseudogene 1 chr10 42694371 42714575 - 20205 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CUBNP1 NA 0.024 50-60% Testis 4.906892038 CHD,HCC NA NA boxplot RP11-546M21.6 NA chr17 44115912 44120595 + 4684 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-546M21.6 NA 0.318 30-40% Testis 4.430775555 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC107983.4 NA chr17 18572752 18572961 + 210 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC107983.4 NA 0.882 0-10% NA NA CRC,HCC,Normal,PAAD CRC(up),HCC(up),PAAD(up) NA boxplot LINC00487 long intergenic non-protein coding RNA 487 chr2 6728177 6770311 - 42135 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00487 NA 0.047 70-80% NA NA Breast_cancer,CRC,HCC NA NA boxplot CH17-125A10.1 NA chr1 144276484 144305180 - 28697 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CH17-125A10.1 NA 0.082 90-100% NA NA CRC,HCC,Normal NA NA boxplot RP11-253M7.3 NA chr15 69434466 69435120 - 655 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-253M7.3 NA 0.012 90-100% NA NA Breast_cancer,HCC NA NA boxplot RP11-346D14.1 NA chr15 38139595 38226887 - 87293 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-346D14.1 NA 0.024 90-100% Brain 4.152427298 Breast_cancer,PAAD NA NA boxplot RP1-228H13.2 NA chr1 40364766 40365183 + 418 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-228H13.2 NA 0.071 40-50% Spleen 4.906892038 CRC,Normal NA NA boxplot LINC00964 long intergenic non-protein coding RNA 964 chr8 124848737 124954328 + 105592 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00964 NA 0.224 40-50% Testis 3.060943094 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CTD-3105H18.5 NA chr19 12373609 12373731 + 123 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-3105H18.5 NA 0.012 40-50% NA NA Normal NA NA boxplot AC006273.4 NA chr19 781002 781862 - 861 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC006273.4 NA 0.059 80-90% NA NA Breast_cancer,CRC,HCC NA NA boxplot MRVI1-AS1 MRVI1 antisense RNA 1 chr11 10541272 10599932 + 58661 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MRVI1-AS1 NA 0.588 20-30% Testis 4.046465287 Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-636O21.2 NA chr18 39841809 39896298 + 54490 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-636O21.2 NA 0.047 70-80% NA NA Breast_cancer,CRC,Normal NA NA boxplot RP11-165D7.5 NA chr13 48532013 48532599 - 587 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-165D7.5 NA 0.118 40-50% NA NA CRC,Normal,PAAD NA NA boxplot RPL9P32 ribosomal protein L9 pseudogene 32 chr19 29956369 29956988 - 620 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL9P32 NA 0.118 80-90% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot RPL23AP24 ribosomal protein L23a pseudogene 24 chr1 347982 348366 - 385 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL23AP24 NA 0.6 30-40% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP6-159A1.3 NA chrX 65999751 66001071 + 1321 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP6-159A1.3 NA 0.059 60-70% Salivary Gland 3.303822196 CRC,HCC,Normal NA NA boxplot RP11-254F19.2 NA chr16 84828263 84829242 + 980 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-254F19.2 NA 0.024 40-50% NA NA CRC,HCC NA NA boxplot CTD-3236F5.1 NA chr11 17137976 17138265 - 290 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-3236F5.1 NA 0.071 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-110A12.2 NA chr12 55434734 55585471 - 150738 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-110A12.2 NA 0.047 80-90% NA NA HCC,Normal NA NA boxplot AC097374.2 NA chr2 94867486 94947341 - 79856 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC097374.2 NA 0.012 20-30% Testis 4.252862139 Breast_cancer,HCC NA NA boxplot CTD-2527I21.5 NA chr19 35137645 35139580 - 1936 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2527I21.5 NA 0.047 50-60% NA NA Breast_cancer,CRC,Normal NA NA boxplot CTD-2339F6.1 NA chr8 57746149 57750199 + 4051 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2339F6.1 NA 0.188 30-40% Nerve 2.818630827 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot U91328.22 NA chr6 26013241 26013757 + 517 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=U91328.22 NA 0.012 40-50% NA NA NA NA NA boxplot FABP5P2 fatty acid binding protein 5 pseudogene 2 chr13 51966742 51967149 + 408 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FABP5P2 NA 0.341 70-80% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-141C7.2 NA chr3 195701618 195711643 + 10026 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-141C7.2 NA 0.153 80-90% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-950C14.3 NA chr14 75004719 75008481 - 3763 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-950C14.3 NA 0.541 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot FABP5P15 fatty acid binding protein 5 pseudogene 15 chrX 77727867 77728080 + 214 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FABP5P15 NA 0.012 40-50% NA NA Normal NA NA boxplot RP11-230F18.6 NA chr13 113511747 113514473 + 2727 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-230F18.6 NA 0.165 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CYCSP28 cytochrome c, somatic pseudogene 28 chr11 83328926 83329246 + 321 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CYCSP28 NA 0.012 50-60% NA NA Breast_cancer,Normal NA NA boxplot TMC3-AS1 TMC3 antisense RNA 1 chr15 81324377 81362037 + 37661 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TMC3-AS1 exo_circ_017120 0.235 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot AF131215.2 NA chr8 11107788 11109726 - 1939 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AF131215.2 NA 0.788 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-329N15.3 NA chr3 146504570 146506560 - 1991 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-329N15.3 NA 0.271 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RPL14P1 ribosomal protein L14 pseudogene 1 chr12 62965325 62965969 + 645 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL14P1 NA 1 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CRC(down),HCC(down) NA boxplot BNIP3P26 BCL2/adenovirus E1B 19kDa interacting protein 3 pseudogene 26 chr19 21521343 21521896 - 554 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=BNIP3P26 NA 0.012 40-50% NA NA Normal NA NA boxplot RP11-34P13.15 NA chr1 135141 135895 - 755 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-34P13.15 NA 0.341 40-50% Whole Blood 2.326700495 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CACYBPP2 calcyclin binding protein pseudogene 2 chr2 183607442 183608119 - 678 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CACYBPP2 NA 0.976 0-10% NA NA CHD,CRC,HCC,Normal,PAAD CHD(up) NA boxplot RPL12P14 ribosomal protein L12 pseudogene 14 chr1 15792796 15793285 + 490 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL12P14 NA 0.059 50-60% NA NA HCC,Normal,PAAD NA NA boxplot RP11-433M22.1 NA chr17 48377262 48380370 - 3109 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-433M22.1 NA 0.047 60-70% NA NA CRC,Normal NA NA boxplot RP11-769O8.2 NA chr18 738058 739444 + 1387 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-769O8.2 NA 0.012 70-80% NA NA NA NA NA boxplot AC026202.3 NA chr3 5156905 5187329 - 30425 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC026202.3 NA 0.106 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CTD-3064H18.4 NA chr19 37545470 37549171 - 3702 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-3064H18.4 NA 0.024 40-50% Testis 2.465957569 Breast_cancer,HCC,Normal,PAAD NA NA boxplot HSP90AA2P heat shock protein 90kDa alpha family class A member 2, pseudogene chr11 27888838 27891033 - 2196 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HSP90AA2P NA 1 0-10% NA NA CHD,CRC,HCC,Normal,PAAD CHD(down) NA boxplot AC139099.6 NA chr17 83211996 83221190 + 9195 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC139099.6 NA 0.094 90-100% Testis 3.20400348 Breast_cancer,CRC,HCC,PAAD NA NA boxplot ZNF37BP zinc finger protein 37B, pseudogene chr10 42513510 42552822 - 39313 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ZNF37BP NA 1 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD PAAD(up) NA boxplot AC007292.6 NA chr19 4363789 4364640 + 852 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC007292.6 NA 0.282 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot SAGE3P sarcoma antigen 3, pseudogene chrX 135637623 135642756 - 5134 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SAGE3P NA 0.012 70-80% NA NA PAAD NA NA boxplot RPS4XP16 ribosomal protein S4X pseudogene 16 chr13 51454164 51461315 + 7152 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPS4XP16 NA 0.671 30-40% NA NA CHD,CRC,HCC,Normal,PAAD CHD(down),CRC(down),PAAD(down) NA boxplot RP11-746P2.3 NA chr7 65355934 65357176 + 1243 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-746P2.3 NA 0.024 20-30% NA NA PAAD NA NA boxplot HNRNPA3P5 heterogeneous nuclear ribonucleoprotein A3 pseudogene 5 chr13 65787932 65788764 - 833 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HNRNPA3P5 NA 1 0-10% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot MT1DP metallothionein 1D, pseudogene (functional) chr16 56643705 56644786 + 1082 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MT1DP NA 0.129 40-50% Liver 1.311928714 CHD,CRC,HCC,Normal,PAAD NA NA boxplot RPS4XP6 ribosomal protein S4X pseudogene 6 chr5 37085056 37085852 + 797 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPS4XP6 NA 0.129 90-100% NA NA CHD,HCC,Normal,PAAD NA NA boxplot BEAN1-AS1 BEAN1 antisense RNA 1 chr16 66469796 66481230 - 11435 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=BEAN1-AS1 NA 0.235 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot MIR92B microRNA 92b chr1 155195004 155205495 + 10492 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MIR92B NA 0.094 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot DCAF13P3 DDB1 and CUL4 associated factor 13 pseudogene 3 chr15 50944663 50945996 + 1334 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DCAF13P3 NA 0.153 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-347J14.4 NA chr9 39359890 39369105 - 9216 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-347J14.4 NA 0.012 70-80% NA NA CRC NA NA boxplot CTC-301O7.4 NA chr19 49331617 49340303 - 8687 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-301O7.4 NA 0.906 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RNF7P1 ring finger protein 7 pseudogene 1 chr3 57519669 57520010 - 342 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RNF7P1 NA 0.024 60-70% NA NA Breast_cancer,PAAD NA NA boxplot LINC00837 long intergenic non-protein coding RNA 837 chr10 28789188 28796113 - 6926 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00837 NA 0.024 20-30% Testis 4.900034146 Breast_cancer,CRC,Normal NA NA boxplot CYP1B1-AS1 CYP1B1 antisense RNA 1 chr2 38073447 38231651 + 158205 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CYP1B1-AS1 exo_circ_038342,exo_circ_020115,exo_circ_032835 0.765 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD HCC(up),PAAD(up) NA boxplot RP4-595K12.2 NA chr1 75641346 75642087 - 742 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-595K12.2 NA 0.012 50-60% Testis 4.79468273 CRC,Normal NA NA boxplot AC083884.8 NA chr7 74688939 74729001 - 40063 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC083884.8 NA 0.518 40-50% Testis 1.198219511 CRC,HCC,Normal,PAAD NA NA boxplot RBM43P1 RNA binding motif protein 43 pseudogene 1 chr3 69471452 69472532 - 1081 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RBM43P1 NA 0.012 50-60% Thyroid 4.185185459 CRC NA NA boxplot RP11-142E9.1 NA chr13 33846190 33850825 + 4636 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-142E9.1 NA 0.424 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD PAAD(up) NA boxplot RP11-10J5.1 NA chr6 137943079 137945802 - 2724 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-10J5.1 NA 0.353 20-30% Testis 4.065085938 CRC,HCC,Normal,PAAD NA NA boxplot RP11-744A16.4 NA chr17 19219143 19222527 + 3385 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-744A16.4 NA 0.106 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC007679.3 NA chr2 205989585 206000858 + 11274 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC007679.3 NA 0.165 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC011239.1 NA chr2 23507043 23524344 - 17302 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC011239.1 NA 0.024 50-60% NA NA Breast_cancer,HCC NA NA boxplot RP11-69L16.5 NA chr6 7338839 7339568 - 730 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-69L16.5 NA 0.882 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RC3H1-IT1 RC3H1 intronic transcript 1 chr1 174009267 174016206 - 6940 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RC3H1-IT1 NA 0.047 50-60% NA NA CRC,Normal,PAAD NA NA boxplot COL6A4P1 collagen, type VI, alpha 4 pseudogene 1 chr3 15151833 15205959 - 54127 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=COL6A4P1 NA 0.024 20-30% NA NA Breast_cancer,PAAD NA NA boxplot RP11-529J17.3 NA chr15 23430839 23435212 + 4374 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-529J17.3 NA 0.153 30-40% NA NA HCC,Normal,PAAD NA NA boxplot RP11-65L3.3 NA chr2 178554561 178558966 + 4406 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-65L3.3 exo_circ_031536 0.153 10-20% NA NA CRC,Normal,PAAD NA NA boxplot RP11-111A21.1 NA chr14 39474840 39513780 + 38941 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-111A21.1 exo_circ_056955,exo_circ_024542,exo_circ_056956,exo_circ_005144 0.106 30-40% Testis 3.962988305 CRC,Normal,PAAD NA NA boxplot RP11-797D24.4 NA chr3 123283593 123283983 + 391 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-797D24.4 NA 0.024 60-70% NA NA CRC NA NA boxplot GTF2IP4 general transcription factor IIi, pseudogene 4 chr7 73154938 73207283 + 52346 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GTF2IP4 NA 0.929 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(up),HCC(up),PAAD(up) NA boxplot RP11-578B16.1 NA chr12 71448405 71448850 + 446 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-578B16.1 NA 0.012 70-80% NA NA NA NA NA boxplot BVES-AS1 BVES antisense RNA 1 chr6 105136308 105169945 + 33638 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=BVES-AS1 NA 0.024 0-10% Testis 1.519283986 Breast_cancer,PAAD NA NA boxplot RP11-455O6.5 NA chr17 81262920 81265401 + 2482 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-455O6.5 NA 0.012 80-90% NA NA Breast_cancer,Normal NA NA boxplot AP001059.7 NA chr21 44244545 44244993 + 449 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AP001059.7 NA 0.059 70-80% NA NA CRC,HCC,PAAD NA NA boxplot RP11-339N8.1 NA chr9 108701370 108703092 - 1723 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-339N8.1 NA 0.024 70-80% Testis 4.906892038 CRC NA NA boxplot CTB-49A3.4 NA chr5 133256492 133275977 + 19486 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTB-49A3.4 NA 0.012 80-90% Pituitary 3.52538767 HCC NA NA boxplot ASS1P2 argininosuccinate synthetase 1 pseudogene 2 chr2 38810432 38811654 - 1223 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ASS1P2 NA 0.106 70-80% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CASC18 cancer susceptibility candidate 18 (non-protein coding) chr12 105704203 105744062 + 39860 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CASC18 NA 0.047 80-90% NA NA Breast_cancer,HCC,Normal NA NA boxplot LINC01293 long intergenic non-protein coding RNA 1293 chr2 74940258 74942670 + 2413 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01293 NA 0.082 30-40% NA NA CRC,HCC,Normal NA NA boxplot U62631.5 NA chr19 35330843 35331920 + 1078 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=U62631.5 NA 0.082 30-40% NA NA CRC,Normal,PAAD NA NA boxplot RP5-867C24.5 NA chr17 47169826 47171049 + 1224 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-867C24.5 NA 0.2 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot AC016831.7 NA chr7 130853720 130928649 + 74930 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC016831.7 NA 0.118 40-50% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot KIAA0087 KIAA0087 chr7 26533121 26538788 - 5668 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KIAA0087 NA 0.2 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CTD-2012K14.4 NA chr16 67542304 67542572 - 269 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2012K14.4 NA 0.318 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP1-102E24.10 NA chr12 6466537 6467135 + 599 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-102E24.10 NA 0.212 70-80% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot UBE2Q1-AS1 UBE2Q1 antisense RNA 1 chr1 154553609 154555017 + 1409 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=UBE2Q1-AS1 NA 0.318 70-80% Testis 2.186822923 CRC,HCC,Normal,PAAD NA NA boxplot CDC42P5 cell division cycle 42 pseudogene 5 chr5 173085342 173086210 - 869 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CDC42P5 NA 0.012 80-90% NA NA Normal NA NA boxplot AC124944.3 NA chr3 195912049 195913986 + 1938 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC124944.3 NA 0.271 70-80% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot EGOT eosinophil granule ontogeny transcript (non-protein coding) chr3 4749192 4751590 - 2399 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=EGOT NA 0.035 10-20% Kidney 1.535822481 Breast_cancer,HCC NA NA boxplot AC104076.3 NA chr2 180979427 180980090 - 664 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC104076.3 NA 0.047 60-70% NA NA CRC,Normal,PAAD NA NA boxplot RP11-347E10.1 NA chr11 110355130 110406400 + 51271 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-347E10.1 NA 0.106 20-30% Adrenal Gland 4.320610006 CRC,HCC,Normal,PAAD NA NA boxplot AP000350.5 NA chr22 23901432 23907068 - 5637 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AP000350.5 NA 0.153 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-424M24.3 NA chr16 70778433 70779145 + 713 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-424M24.3 NA 0.012 60-70% NA NA CRC NA NA boxplot RP11-173P15.9 NA chr12 120703867 120704282 + 416 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-173P15.9 exo_circ_042618 0.047 50-60% NA NA CRC,HCC NA NA boxplot RP11-96C23.9 NA chr10 87113954 87115523 + 1570 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-96C23.9 NA 0.071 50-60% NA NA CRC,Normal,PAAD NA NA boxplot KCNK4-TEX40 KCNK4-TEX40 readthrough chr11 64291722 64304769 + 13048 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KCNK4-TEX40 NA 0.035 90-100% NA NA Breast_cancer,CRC,PAAD NA NA boxplot RP11-130L8.1 NA chr2 20678254 20678932 - 679 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-130L8.1 NA 0.047 80-90% NA NA CRC,Normal NA NA boxplot MCFD2P1 multiple coagulation factor deficiency 2 pseudogene 1 chr6 27407697 27407996 + 300 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MCFD2P1 NA 0.059 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-279O17.3 NA chr16 8309962 8357860 + 47899 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-279O17.3 NA 0.012 20-30% Testis 4.906892038 Breast_cancer,PAAD NA NA boxplot RP11-415F23.4 NA chr3 16345126 16346440 + 1315 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-415F23.4 NA 0.329 10-20% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-981G7.1 NA chr8 10433672 10438312 + 4641 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-981G7.1 exo_circ_022268,exo_circ_016486 0.176 60-70% Brain 1.481400291 Breast_cancer,CRC,HCC,Normal NA NA boxplot RP11-93G5.1 NA chr13 37934565 38048169 + 113605 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-93G5.1 exo_circ_005074 0.012 50-60% NA NA Breast_cancer,HCC NA NA boxplot RP11-321M21.3 NA chr18 75407012 75419040 + 12029 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-321M21.3 NA 0.012 30-40% Testis 4.906892038 Breast_cancer,PAAD NA NA boxplot RP11-542M13.3 NA chr16 85935281 85936223 - 943 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-542M13.3 NA 0.447 30-40% Spleen 3.370523033 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot FAM3C2 FAM3C pseudogene chrX 23075758 23076767 + 1010 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FAM3C2 NA 1 0-10% NA NA CHD,CRC,HCC,Normal,PAAD CHD(down),CRC(down),PAAD(down) NA boxplot AC144831.1 NA chr17 83104255 83106910 + 2656 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC144831.1 exo_circ_020016 0.306 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-191A15.4 NA chr6 25218688 25219069 + 382 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-191A15.4 NA 0.012 20-30% NA NA Breast_cancer,PAAD NA NA boxplot FAM138B family with sequence similarity 138 member B chr2 113577382 113578852 + 1471 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FAM138B NA 0.024 30-40% NA NA Breast_cancer,Normal,PAAD NA NA boxplot RP11-613G13.1 NA chr14 57040885 57042504 + 1620 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-613G13.1 NA 0.047 90-100% Testis 4.906892038 Breast_cancer,HCC,Normal,PAAD NA NA boxplot NIFKP1 nucleolar protein interacting with the FHA domain of MKI67 pseudogene 1 chr10 30380174 30381062 + 889 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NIFKP1 NA 0.012 60-70% NA NA Breast_cancer,CRC NA NA boxplot SSTR5-AS1 SSTR5 antisense RNA 1 chr16 1064093 1078731 - 14639 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SSTR5-AS1 NA 0.047 10-20% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot ATP8B5P ATPase, class I, type 8B, member 5, pseudogene chr9 35406755 35483035 + 76281 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ATP8B5P NA 0.376 70-80% Testis 2.078331103 Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-220H4.2 NA chr7 56940341 56944353 - 4013 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-220H4.2 NA 0.012 60-70% Testis 4.906892038 Breast_cancer,PAAD NA NA boxplot RP5-875O13.7 NA chr1 16681097 16688749 - 7653 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-875O13.7 NA 0.106 60-70% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot CCT7P1 chaperonin containing TCP1 subunit 7 pseudogene 1 chr6 149879962 149881572 + 1611 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CCT7P1 NA 0.012 90-100% NA NA NA NA NA boxplot SPRY4-IT1 SPRY4 intronic transcript 1 chr5 142317620 142318322 - 703 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SPRY4-IT1 NA 0.035 70-80% NA NA PAAD NA NA boxplot AC009518.3 NA chr7 131893822 131894074 + 253 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC009518.3 NA 0.012 90-100% Testis 4.906892038 NA NA NA boxplot RP5-1009E24.8 NA chr20 3808357 3812434 + 4078 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-1009E24.8 NA 0.141 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-413H22.3 NA chr16 56465642 56466162 - 521 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-413H22.3 NA 0.082 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CTD-2501E16.2 NA chr15 60529973 60545159 + 15187 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2501E16.2 NA 0.141 70-80% Testis 2.842022756 CRC,HCC,Normal,PAAD NA NA boxplot AC108463.2 NA chr2 111203964 111206215 - 2252 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC108463.2 NA 0.6 10-20% NA NA CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-162K11.4 NA chr10 94109116 94121107 + 11992 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-162K11.4 NA 0.012 90-100% Testis 4.906892038 NA NA NA boxplot RP11-84A19.4 NA chr1 31851913 31921841 - 69929 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-84A19.4 NA 0.118 20-30% NA NA CRC,HCC,Normal NA NA boxplot RP11-61A14.4 NA chr16 66751752 66754740 + 2989 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-61A14.4 NA 0.035 50-60% Testis 1.964660727 Breast_cancer,HCC,Normal,PAAD NA NA boxplot RP11-933H2.4 NA chr3 131325092 131381475 - 56384 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-933H2.4 NA 0.2 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RARRES2P1 retinoic acid receptor responder (tazarotene induced) 2 pseudogene 1 chr3 75658534 75659014 + 481 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RARRES2P1 NA 0.059 30-40% NA NA Normal,PAAD NA NA boxplot RP11-258C19.7 NA chrX 53169097 53170914 + 1818 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-258C19.7 NA 0.259 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-557C18.4 NA chr8 122977026 122985629 - 8604 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-557C18.4 NA 0.024 80-90% Spleen 4.906892038 HCC,Normal NA NA boxplot SNHG5 small nucleolar RNA host gene 5 chr6 85660950 85678736 - 17787 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SNHG5 NA 1 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CRC(down) NA boxplot RP11-78B10.2 NA chr1 207551925 207606555 - 54631 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-78B10.2 NA 0.129 50-60% NA NA CRC,HCC,Normal NA NA boxplot PMS2CL PMS2 C-terminal like pseudogene chr7 6710128 6753862 + 43735 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PMS2CL NA 0.965 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot EIF3J-AS1 EIF3J antisense RNA 1 (head to head) chr15 44527257 44536923 - 9667 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=EIF3J-AS1 exo_circ_034375 0.941 0-10% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot CTD-2349P21.11 NA chr17 30834325 30863028 - 28704 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2349P21.11 NA 0.047 80-90% Spleen 3.601041479 CRC,HCC,Normal NA NA boxplot RP11-366L5.1 NA chr2 181887851 181891663 - 3813 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-366L5.1 NA 0.741 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-133K1.7 NA chr15 40232082 40236109 + 4028 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-133K1.7 NA 0.012 10-20% Testis 3.133157596 Breast_cancer NA NA boxplot CTC-340A15.2 NA chr5 164296696 165171643 + 874948 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-340A15.2 NA 0.035 40-50% NA NA CRC,HCC,Normal NA NA boxplot RP11-593F23.1 NA chr15 76174891 76181486 - 6596 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-593F23.1 NA 0.059 50-60% NA NA Breast_cancer,CRC,Normal,PAAD NA NA boxplot XXbac-BPG283O16.9 NA chr6 30282349 30286054 - 3706 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=XXbac-BPG283O16.9 NA 0.906 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot ACAP2-IT1 ACAP2 intronic transcript 1 chr3 195280723 195282741 - 2019 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ACAP2-IT1 NA 0.106 50-60% NA NA CRC,HCC,Normal NA NA boxplot PCAT29 prostate cancer associated transcript 29 (non-protein coding) chr15 69592129 69695750 + 103622 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PCAT29 NA 0.188 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC007969.5 NA chr2 171517270 171517716 - 447 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC007969.5 NA 0.929 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),PAAD(down) NA boxplot RP11-679B19.2 NA chr16 79212711 79229453 - 16743 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-679B19.2 NA 0.047 0-10% NA NA CRC,Normal NA NA boxplot CTD-2647L4.4 NA chr8 29055935 29056685 + 751 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2647L4.4 NA 0.847 10-20% NA NA CRC,HCC,Normal,PAAD CHD(down) NA boxplot CTA-384D8.34 NA chr22 50542650 50543011 + 362 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTA-384D8.34 NA 0.765 20-30% NA NA CRC,HCC,Normal,PAAD CRC(up) NA boxplot RP11-930O11.1 NA chr14 56310880 56345001 + 34122 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-930O11.1 exo_circ_056996 0.918 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot PTPRVP protein tyrosine phosphatase, receptor type V, pseudogene chr1 202168051 202189455 + 21405 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PTPRVP NA 0.071 80-90% Testis 1.535195248 Breast_cancer,CRC,HCC,PAAD NA NA boxplot RP11-370A5.2 NA chr18 22882825 22883357 - 533 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-370A5.2 NA 0.012 70-80% Testis 1.598819498 NA NA NA boxplot PCA3 prostate cancer associated 3 (non-protein coding) chr9 76764436 76787569 + 23134 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PCA3 exo_circ_028152 0.071 30-40% Prostate 1.487053386 HCC,Normal NA Yes boxplot RP5-875H18.4 NA chr17 50100704 50101920 - 1217 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-875H18.4 NA 0.035 60-70% NA NA Breast_cancer,HCC NA NA boxplot RP11-152L20.3 NA chr15 92148752 92331037 - 182286 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-152L20.3 NA 0.541 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot RP11-13K12.1 NA chr17 77546940 77563243 + 16304 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-13K12.1 NA 0.482 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-301O19.1 NA chr2 86195590 86196049 + 460 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-301O19.1 NA 0.047 70-80% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-342D11.3 NA chr10 33096257 33116672 - 20416 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-342D11.3 NA 0.435 10-20% NA NA CRC,HCC,Normal,PAAD NA NA boxplot FGD5-AS1 FGD5 antisense RNA 1 chr3 14920347 14948424 - 28078 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FGD5-AS1 NA 1 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-403B2.7 NA chr15 20729747 20756183 - 26437 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-403B2.7 NA 0.353 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-344P13.6 NA chr1 121518366 121518829 - 464 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-344P13.6 NA 0.094 20-30% Pituitary 2.205596505 HCC,Normal,PAAD NA NA boxplot RP11-303E16.8 NA chr16 81053665 81087651 - 33987 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-303E16.8 NA 0.306 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot LINC01177 long intergenic non-protein coding RNA 1177 chr16 9441294 9444985 - 3692 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01177 NA 0.012 80-90% NA NA Breast_cancer,CHD NA NA boxplot CTD-2350C19.2 NA chr17 28405240 28406796 + 1557 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2350C19.2 NA 0.247 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot ALG3P1 ALG3, alpha-1,3- mannosyltransferase pseudogene 1 chr5 5375723 5376836 - 1114 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ALG3P1 exo_circ_033315 0.035 90-100% Testis 3.77414787 Breast_cancer,CRC NA NA boxplot AC093495.4 NA chr3 14144637 14165978 + 21342 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC093495.4 NA 0.635 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down) NA boxplot RP5-1158E12.3 NA chrX 45848074 45851490 - 3417 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-1158E12.3 NA 0.047 0-10% NA NA Breast_cancer,CRC,Normal,PAAD NA NA boxplot RP11-23J9.7 NA chr9 97276566 97295759 + 19194 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-23J9.7 NA 0.094 70-80% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CTD-2541J13.2 NA chr18 67506589 67514030 + 7442 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2541J13.2 NA 0.153 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-52J3.3 NA chr6 157829143 157830573 - 1431 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-52J3.3 NA 0.024 90-100% Testis 4.887752407 HCC NA NA boxplot RP11-562I5.1 NA chr2 231493708 231495299 - 1592 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-562I5.1 NA 0.035 70-80% NA NA CRC,Normal NA NA boxplot CTB-3M24.2 NA chr5 133457805 133458331 + 527 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTB-3M24.2 NA 0.012 80-90% NA NA PAAD NA NA boxplot CTA-212A2.1 NA chr22 36137430 36139350 - 1921 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTA-212A2.1 NA 0.765 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD HCC(up) NA boxplot CDH12P3 cadherin 12 (N-cadherin 2) pseudogene 3 chr5 70132679 70132973 + 295 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CDH12P3 NA 0.082 90-100% NA NA HCC,Normal NA NA boxplot RP11-778J15.1 NA chr4 86117912 86219926 + 102015 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-778J15.1 NA 0.024 10-20% Testis 4.582110375 Breast_cancer,CRC,Normal NA NA boxplot CTC-273B12.5 NA chr19 48465593 48469693 - 4101 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-273B12.5 NA 0.141 50-60% Testis 4.906892038 Breast_cancer,HCC,Normal,PAAD NA NA boxplot AC087499.4 NA chr17 20595531 20595708 + 178 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC087499.4 NA 0.024 90-100% NA NA CRC,PAAD NA NA boxplot RP11-708J19.3 NA chr3 47469777 47469987 + 211 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-708J19.3 NA 0.012 40-50% NA NA HCC NA NA boxplot SNHG14 small nucleolar RNA host gene 14 chr15 24978583 25419462 + 440880 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SNHG14 exo_circ_026829,exo_circ_002325,exo_circ_034354,exo_circ_002900,exo_circ_045814,exo_circ_017053,exo_circ_045815,exo_circ_057094,exo_circ_005232,exo_circ_051454,exo_circ_057095,exo_circ_057093,exo_circ_011129 0.929 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot CTD-3051D23.1 NA chr14 104842663 104845916 + 3254 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-3051D23.1 NA 0.024 80-90% NA NA Breast_cancer,CRC NA NA boxplot RP11-351J23.1 NA chr6 167679626 167683787 - 4162 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-351J23.1 NA 0.024 60-70% Esophagus 3.621555152 Breast_cancer,Normal NA NA boxplot CTC-484P3.3 NA chr5 94788789 94793599 + 4811 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-484P3.3 NA 0.012 80-90% NA NA Normal NA NA boxplot RP11-353N4.5 NA chr1 149676851 149747818 - 70968 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-353N4.5 NA 0.094 70-80% Testis 3.088833239 Breast_cancer,CRC,Normal,PAAD NA NA boxplot PI4KAP1 phosphatidylinositol 4-kinase, catalytic, alpha pseudogene 1 chr22 18533646 18577968 - 44323 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PI4KAP1 NA 0.894 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CRC(up),PAAD(up) NA boxplot RP11-2C24.4 NA chr16 30740667 30751381 + 10715 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-2C24.4 NA 0.529 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot AC064834.1 NA chr2 195448532 195478925 + 30394 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC064834.1 NA 0.012 90-100% Testis 4.906892038 Breast_cancer,HCC NA NA boxplot RP11-463O12.5 NA chr12 122870059 122888720 - 18662 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-463O12.5 NA 0.871 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(up),HCC(down) NA boxplot VN1R110P vomeronasal 1 receptor 110 pseudogene chrX 48636165 48637135 + 971 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=VN1R110P NA 0.494 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC000068.10 NA chr22 19456503 19456962 + 460 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC000068.10 NA 0.212 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-86K22.2 NA chr15 57990217 57990636 - 420 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-86K22.2 NA 0.012 0-10% NA NA PAAD NA NA boxplot RP11-467P9.1 NA chr2 71067519 71068125 - 607 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-467P9.1 NA 0.129 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-56F10.3 NA chr9 27102630 27104728 + 2099 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-56F10.3 NA 0.106 50-60% NA NA HCC,Normal,PAAD NA NA boxplot RP11-343L5.2 NA chr5 83049376 83050964 - 1589 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-343L5.2 NA 0.235 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RARA-AS1 RARA antisense RNA 1 chr17 40340867 40343136 - 2270 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RARA-AS1 NA 0.906 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP3-508I15.18 NA chr22 38734725 38738765 + 4041 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-508I15.18 NA 0.294 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CTC-425O23.2 NA chr19 40273489 40275479 - 1991 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-425O23.2 NA 0.106 50-60% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot RP11-10E18.7 NA chr13 95744726 95745765 + 1040 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-10E18.7 NA 0.071 50-60% NA NA CRC,Normal NA NA boxplot KNOP1P2 lysine-rich nucleolar protein 1 pseudogene 2 chr12 45880950 45882266 - 1317 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KNOP1P2 NA 0.012 0-10% NA NA Breast_cancer,PAAD NA NA boxplot OR10Y1P olfactory receptor family 10 subfamily Y member 1 pseudogene chr11 59728519 59729492 + 974 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=OR10Y1P NA 0.012 60-70% NA NA Breast_cancer,PAAD NA NA boxplot KRT18P19 keratin 18 pseudogene 19 chr2 189311263 189311967 - 705 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KRT18P19 exo_circ_021602 0.012 80-90% NA NA Breast_cancer,CRC NA NA boxplot RP4-751H13.5 NA chr7 149851572 149852170 + 599 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-751H13.5 NA 0.212 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-472I20.3 NA chr11 43556436 43673393 + 116958 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-472I20.3 NA 0.012 30-40% NA NA Breast_cancer,CRC NA NA boxplot AL590762.6 NA chrX 71314912 71315879 - 968 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AL590762.6 NA 0.012 90-100% NA NA HCC,PAAD NA NA boxplot PVRIG2P poliovirus receptor related immunoglobulin domain containing 2, pseudogene chr7 100352360 100353692 + 1333 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PVRIG2P NA 0.541 60-70% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP4-671O14.6 NA chr22 44139365 44153626 + 14262 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-671O14.6 NA 0.318 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot TRIM36-IT1 TRIM36 intronic transcript 1 chr5 115148764 115149644 - 881 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TRIM36-IT1 NA 0.012 80-90% Testis 2.853419043 NA NA NA boxplot AC093642.1 NA chr2 242001209 242006013 + 4805 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC093642.1 NA 0.059 60-70% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot AC007879.5 NA chr2 207239864 207529795 - 289932 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC007879.5 NA 0.659 20-30% Testis 1.495630637 CRC,HCC,Normal,PAAD NA NA boxplot RP1-45C12.1 NA chr1 171247580 171251794 - 4215 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-45C12.1 NA 0.082 20-30% NA NA CRC,HCC,Normal NA NA boxplot RP11-417J1.3 NA chr5 8619178 8620310 + 1133 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-417J1.3 NA 0.012 50-60% NA NA HCC NA NA boxplot LINC00648 long intergenic non-protein coding RNA 648 chr14 47764954 47795092 - 30139 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00648 NA 0.024 30-40% NA NA Breast_cancer,HCC NA NA boxplot RP11-714M23.2 NA chr18 57427133 57432112 + 4980 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-714M23.2 NA 0.047 70-80% NA NA Breast_cancer,HCC,PAAD NA NA boxplot AC006296.2 NA chr4 14390439 14393992 + 3554 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC006296.2 exo_circ_003767 0.012 90-100% NA NA Breast_cancer,CRC NA NA boxplot RP11-310E22.6 NA chr10 95173085 95173187 - 103 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-310E22.6 exo_circ_039637 0.047 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-517B11.7 NA chr3 131455126 131458598 - 3473 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-517B11.7 NA 0.741 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down) NA boxplot RP11-54D18.2 NA chr9 14993312 15019729 + 26418 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-54D18.2 NA 0.071 20-30% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot LINC00896 long intergenic non-protein coding RNA 896 chr22 20206397 20208524 + 2128 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00896 NA 0.047 80-90% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot AC079767.4 NA chr2 207662375 207667024 + 4650 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC079767.4 NA 0.929 0-10% Spleen 4.092509366 CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot CTB-96E2.3 NA chr17 28357647 28381697 + 24051 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTB-96E2.3 exo_circ_046082 0.894 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-566K11.7 NA chr16 89906157 89918233 + 12077 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-566K11.7 NA 0.071 60-70% NA NA CRC,Normal,PAAD NA NA boxplot RP11-703M24.5 NA chr18 2688564 2833065 - 144502 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-703M24.5 NA 0.024 90-100% NA NA Breast_cancer,HCC,PAAD NA NA boxplot OOSP1P2 oocyte secreted protein 1 pseudogene 2 chr17 32343774 32344124 - 351 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=OOSP1P2 NA 0.012 90-100% NA NA CRC NA NA boxplot AC004381.7 NA chr16 20743663 20766620 - 22958 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC004381.7 NA 0.094 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-473I1.5 NA chr16 9105834 9107174 - 1341 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-473I1.5 NA 0.424 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-35O15.2 NA chr15 98660210 98660668 + 459 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-35O15.2 exo_circ_028727,exo_circ_057302 0.047 30-40% NA NA CRC,PAAD NA NA boxplot SPATA31C2 SPATA31 subfamily C, member 2 chr9 88129458 88138446 - 8989 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SPATA31C2 NA 0.024 80-90% Testis 4.806327575 Breast_cancer,CRC,Normal NA NA boxplot FAM223A family with sequence similarity 223 member A (non-protein coding) chrX 154571248 154571960 + 713 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FAM223A NA 0.153 80-90% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-466P24.6 NA chr5 76285542 76311462 - 25921 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-466P24.6 exo_circ_054974 0.671 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down),HCC(down) NA boxplot AGAP11 ArfGAP with GTPase domain, ankyrin repeat and PH domain 11 chr10 86970741 87010126 + 39386 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AGAP11 NA 0.471 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot AP002954.3 NA chr11 118636620 118638097 + 1478 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AP002954.3 NA 0.024 10-20% NA NA Breast_cancer,HCC,PAAD NA NA boxplot RP11-989E6.13 NA chr16 32916974 32946392 + 29419 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-989E6.13 NA 0.271 70-80% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-545G3.2 NA chr7 150047609 150047854 - 246 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-545G3.2 NA 0.071 90-100% NA NA CRC,Normal,PAAD NA NA boxplot RPS3AP46 ribosomal protein S3a pseudogene 46 chr14 53612724 53613405 + 682 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPS3AP46 exo_circ_045713 0.024 70-80% Small Intestine 4.906892038 CRC NA NA boxplot SNRPEP2 small nuclear ribonucleoprotein polypeptide E pseudogene 2 chr9 6748703 6748981 - 279 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SNRPEP2 NA 0.259 80-90% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-532N4.2 NA chr6 123389421 123510241 + 120821 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-532N4.2 NA 0.012 90-100% Heart 4.732828934 Breast_cancer,Normal NA NA boxplot RP11-488L18.6 NA chr1 247175256 247175525 + 270 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-488L18.6 NA 0.071 60-70% NA NA CRC,Normal NA NA boxplot XRCC6P1 X-ray repair complementing defective repair in Chinese hamster cells 6 pseudogene 1 chr10 93206857 93209627 - 2771 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=XRCC6P1 NA 0.012 20-30% Liver 3.583290659 Breast_cancer,HCC NA NA boxplot RP11-153M7.3 NA chr4 153640168 153681180 + 41013 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-153M7.3 NA 0.588 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),PAAD(down) NA boxplot RP11-1024P17.1 NA chr3 30697661 30699576 + 1916 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1024P17.1 exo_circ_027498 0.341 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-472F19.1 NA chr1 78317157 78317263 - 107 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-472F19.1 NA 0.012 90-100% NA NA Normal NA NA boxplot ST3GAL6-AS1 ST3GAL6 antisense RNA 1 chr3 98714330 98732651 - 18322 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ST3GAL6-AS1 NA 0.624 10-20% NA NA CRC,HCC,Normal,PAAD CHD(down),HCC(down) NA boxplot RPL12P20 ribosomal protein L12 pseudogene 20 chr4 41389115 41389593 + 479 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL12P20 NA 0.035 20-30% NA NA Breast_cancer,Normal,PAAD NA NA boxplot RP5-855D21.3 NA chr8 233119 233692 + 574 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-855D21.3 NA 0.118 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP3-400B16.2 NA chr6 4189116 4189806 + 691 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-400B16.2 NA 0.235 40-50% Testis 4.740173791 CRC,HCC,Normal,PAAD NA NA boxplot RP11-67L3.5 NA chr1 54886875 54888001 + 1127 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-67L3.5 NA 0.141 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot FAM60BP family with sequence similarity 60, member B pseudogene chr18 26255698 26256355 - 658 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FAM60BP NA 0.553 50-60% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-258F22.1 NA chr10 37775371 37784131 - 8761 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-258F22.1 NA 0.2 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP1-203P18.1 NA chrX 146619597 146620584 - 988 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-203P18.1 NA 0.776 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot C1RL-AS1 C1RL antisense RNA 1 chr12 7108052 7122501 + 14450 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=C1RL-AS1 exo_circ_045523 0.812 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down) NA boxplot HNRNPA1P73 heterogeneous nuclear ribonucleoprotein A1 pseudogene 73 chr7 27328607 27329534 - 928 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HNRNPA1P73 NA 0.012 60-70% NA NA PAAD NA NA boxplot ADH5P4 alcohol dehydrogenase 5 (class III), chi polypeptide, pseudogene 4 chr6 65836930 65838039 - 1110 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ADH5P4 NA 0.765 30-40% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RPS4XP17 ribosomal protein S4X pseudogene 17 chr17 656794 657547 - 754 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPS4XP17 NA 0.365 40-50% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot FOXN3-AS2 FOXN3 antisense RNA 2 chr14 89576216 89577477 + 1262 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FOXN3-AS2 NA 0.012 90-100% Brain 4.906892038 CRC NA NA boxplot UBE2L4 ubiquitin conjugating enzyme E2L 4 (pseudogene) chr19 9774497 9774960 + 464 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=UBE2L4 NA 0.153 80-90% NA NA CHD,CRC,HCC,Normal NA NA boxplot AC034228.3 NA chr5 132003592 132007022 + 3431 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC034228.3 NA 0.012 90-100% NA NA Breast_cancer,CRC NA NA boxplot RP11-50C13.2 NA chr15 58521311 58523371 + 2061 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-50C13.2 NA 0.118 60-70% Liver 4.183801739 Breast_cancer,CRC,Normal,PAAD NA NA boxplot CTC-492K19.4 NA chr19 40443436 40444087 + 652 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-492K19.4 NA 0.071 20-30% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot RP11-299P2.1 NA chr18 63151114 63151320 - 207 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-299P2.1 NA 0.071 80-90% NA NA CRC,Normal NA NA boxplot LA16c-380F5.3 NA chr16 1553655 1554130 - 476 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LA16c-380F5.3 NA 0.035 70-80% NA NA Breast_cancer,HCC NA NA boxplot RP5-888M10.2 NA chr1 12527724 12528420 + 697 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-888M10.2 NA 0.047 70-80% Liver 1.19428664 Breast_cancer,CRC,HCC,Normal NA NA boxplot LOC100421166 SEC24 homolog A, COPII coat complex component pseudogene chr17 69094289 69095499 - 1211 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LOC100421166 NA 0.094 10-20% NA NA Breast_cancer,CRC,Normal NA NA boxplot RP11-468E2.10 NA chr14 24198433 24199090 + 658 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-468E2.10 NA 0.106 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot AC008271.1 NA chr2 15690782 15744339 + 53558 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC008271.1 NA 0.059 60-70% Testis 4.887350352 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot PIGUP1 phosphatidylinositol glycan anchor biosynthesis class U pseudogene 1 chr9 70916997 70917501 - 505 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PIGUP1 NA 0.129 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot AC092066.6 NA chr19 44765148 44765464 + 317 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC092066.6 NA 0.012 40-50% NA NA PAAD NA NA boxplot LINC01189 long intergenic non-protein coding RNA 1189 chr9 62515191 62522018 + 6828 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01189 NA 0.012 80-90% NA NA HCC NA NA boxplot CTD-2258A20.3 NA chr16 66450998 66451351 - 354 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2258A20.3 exo_circ_051722 0.012 80-90% Testis 4.432052897 HCC NA NA boxplot HSPE1P27 heat shock protein family E (Hsp10) member 1 pseudogene 27 chr1 21161475 21162081 + 607 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HSPE1P27 NA 0.024 40-50% NA NA CRC,Normal NA NA boxplot LINC00370 long intergenic non-protein coding RNA 370 chr13 109281973 109287733 + 5761 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00370 NA 0.024 70-80% Muscle 4.080526851 Breast_cancer,HCC,PAAD NA NA boxplot KB-176G8.1 NA chr21 36485867 36487760 + 1894 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KB-176G8.1 exo_circ_034874 0.059 10-20% NA NA CRC,HCC,Normal,PAAD NA NA boxplot LINC01268 long intergenic non-protein coding RNA 1268 chr6 113868013 113873351 - 5339 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01268 NA 0.188 40-50% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot LINC01037 long intergenic non-protein coding RNA 1037 chr1 187443606 187477222 + 33617 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01037 exo_circ_013794 0.094 60-70% NA NA CRC,HCC,Normal NA NA boxplot CTC-459M5.1 NA chr5 112173570 112175548 + 1979 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-459M5.1 NA 0.012 10-20% NA NA PAAD NA NA boxplot RP11-603B24.2 NA chr15 22258138 22258848 + 711 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-603B24.2 NA 0.071 50-60% Testis 1.894543687 Breast_cancer,HCC,Normal,PAAD NA NA boxplot GS1-124K5.4 uncharacterized LOC100289098 chr7 66493706 66495474 + 1769 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GS1-124K5.4 NA 0.459 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot LINC00441 long intergenic non-protein coding RNA 441 chr13 48296513 48303661 - 7149 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00441 NA 0.153 40-50% Testis 1.490579794 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-164O23.7 NA chr1 207179296 207184062 + 4767 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-164O23.7 NA 0.012 60-70% Testis 4.668523629 NA NA NA boxplot RP4-791C19.1 NA chr7 54933699 54938184 + 4486 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-791C19.1 NA 0.106 40-50% NA NA CRC,HCC,Normal NA NA boxplot RP1-116K23.1 NA chr12 126168235 126171666 + 3432 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-116K23.1 exo_circ_004934 0.012 0-10% Testis 4.860745194 Breast_cancer,PAAD NA NA boxplot CTD-2325P2.3 NA chr14 68683411 68685565 - 2155 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2325P2.3 NA 0.153 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot NDUFB2-AS1 NDUFB2 antisense RNA 1 chr7 140695336 140697077 - 1742 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NDUFB2-AS1 NA 0.482 20-30% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up) NA boxplot OR2S1P olfactory receptor family 2 subfamily S member 1 pseudogene chr9 36013184 36014133 + 950 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=OR2S1P NA 0.012 10-20% NA NA Breast_cancer,HCC NA NA boxplot RP11-134N1.2 NA chr12 14216590 14221297 + 4708 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-134N1.2 NA 0.071 40-50% Spleen 1.935187359 CRC,HCC,Normal,PAAD NA NA boxplot CH507-24F1.1 NA chr21 5499151 5502542 - 3392 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CH507-24F1.1 NA 0.188 80-90% NA NA CRC,HCC,PAAD NA NA boxplot RPL34P17 ribosomal protein L34 pseudogene 17 chr8 52313154 52313500 - 347 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL34P17 NA 0.012 0-10% Spleen 3.996056755 Normal NA NA boxplot RP11-540B6.2 NA chr15 30882267 30883231 - 965 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-540B6.2 NA 0.012 90-100% Testis 2.461459346 Breast_cancer NA NA boxplot RP3-467K16.4 NA chr1 15402979 15409433 - 6455 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-467K16.4 NA 0.224 40-50% Testis 3.302411352 Breast_cancer,CRC,HCC,Normal NA NA boxplot RP11-798M19.3 NA chr4 173322206 173329694 - 7489 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-798M19.3 NA 0.212 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot LINC01036 long intergenic non-protein coding RNA 1036 chr1 187092842 187360323 + 267482 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01036 exo_circ_019387,exo_circ_007383,exo_circ_027097 0.671 10-20% Prostate 4.199381689 CHD,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(up),PAAD(down) NA boxplot RP11-774O3.3 NA chr4 8355090 8358338 - 3249 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-774O3.3 NA 0.482 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot SIAH2-AS1 SIAH2 antisense RNA 1 chr3 150761937 150762538 + 602 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SIAH2-AS1 NA 0.482 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC006116.27 NA chr19 56377037 56377792 - 756 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC006116.27 NA 0.294 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot RP11-492M23.2 NA chr10 28898996 28899484 - 489 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-492M23.2 NA 0.8 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot MCRIP2P1 NA chrX 131795657 131796167 - 511 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MCRIP2P1 NA 0.047 50-60% NA NA Normal,PAAD NA NA boxplot RP11-485M7.3 NA chr5 133111055 133114475 - 3421 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-485M7.3 NA 0.012 50-60% Skin 4.489606689 Normal NA NA boxplot CYP2F2P cytochrome P450 family 2 subfamily F member 2, pseudogene chr19 40818721 40826772 - 8052 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CYP2F2P NA 0.753 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-1085N6.3 NA chr14 56648965 56730535 - 81571 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1085N6.3 NA 0.035 30-40% NA NA Normal NA NA boxplot NAALADL2-AS2 NAALADL2 antisense RNA 2 chr3 175234861 175271096 - 36236 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NAALADL2-AS2 NA 0.035 70-80% Pituitary 4.906892038 Normal NA NA boxplot VN1R83P vomeronasal 1 receptor 83 pseudogene chr19 21289554 21289998 - 445 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=VN1R83P NA 0.106 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot ZNF32-AS2 ZNF32 antisense RNA 2 chr10 43645942 43648019 + 2078 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ZNF32-AS2 NA 0.141 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-678G14.2 NA chr19 21554640 21569237 - 14598 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-678G14.2 NA 0.506 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CTB-180A7.8 NA chr19 6393809 6412404 + 18596 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTB-180A7.8 NA 0.012 90-100% Testis 4.906892038 Breast_cancer NA NA boxplot RP5-828K20.1 NA chr20 22272052 22273454 - 1403 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-828K20.1 NA 0.012 90-100% NA NA HCC NA NA boxplot AC006041.1 NA chr7 15841297 15842360 - 1064 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC006041.1 NA 0.012 40-50% Brain 4.906892038 PAAD NA NA boxplot AP000695.4 NA chr21 36445731 36532408 + 86678 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AP000695.4 NA 0.259 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CTD-2649C14.2 NA chr16 21950218 21951708 - 1491 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2649C14.2 NA 0.129 30-40% NA NA CRC,Normal NA NA boxplot BAIAP2-AS1 BAIAP2 antisense RNA 1 (head to head) chr17 81029130 81034881 - 5752 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=BAIAP2-AS1 NA 0.976 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP5-887A10.1 NA chr1 80535755 80646788 + 111034 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-887A10.1 NA 0.847 0-10% Spleen 3.618935387 Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot AP006621.9 NA chr11 708564 727047 - 18484 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AP006621.9 NA 0.012 70-80% NA NA Breast_cancer,HCC,PAAD NA NA boxplot RP11-576D8.4 NA chr1 205455929 205469024 + 13096 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-576D8.4 NA 0.047 90-100% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-180M15.7 NA chr12 12718973 12719521 + 549 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-180M15.7 NA 0.2 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-669C19.1 NA chr3 20388249 20390562 + 2314 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-669C19.1 exo_circ_049054 0.047 60-70% NA NA CRC,Normal NA NA boxplot CA3-AS1 CA3 antisense RNA 1 chr8 85441851 85464915 - 23065 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CA3-AS1 NA 0.612 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CTD-2643K12.1 NA chr15 94033658 94034177 + 520 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2643K12.1 NA 0.035 80-90% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot RP11-598F7.5 NA chr12 164664 166321 - 1658 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-598F7.5 NA 0.459 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CTD-2600O9.1 NA chr16 57798186 57816946 + 18761 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2600O9.1 NA 0.094 80-90% Pancreas 1.522632005 Breast_cancer,HCC,Normal NA NA boxplot AC017048.1 NA chr2 176506245 176507702 - 1458 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC017048.1 NA 0.012 40-50% Testis 4.906892038 HCC NA NA boxplot CASC20 cancer susceptibility candidate 20 (non-protein coding) chr20 6446723 6528459 + 81737 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CASC20 NA 0.024 0-10% NA NA Breast_cancer,Normal NA NA boxplot RP11-482D24.3 NA chr12 106714924 106733066 - 18143 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-482D24.3 NA 0.035 30-40% Testis 2.417667573 HCC,Normal NA NA boxplot LINC00570 long intergenic non-protein coding RNA 570 chr2 11393981 11403077 + 9097 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00570 NA 0.8 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down),CRC(down),PAAD(down) NA boxplot GATA3-AS1 GATA3 antisense RNA 1 chr10 8050450 8053484 - 3035 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GATA3-AS1 NA 0.071 10-20% Bladder 2.8230916 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP5-1085F17.4 NA chr20 32843128 32854257 - 11130 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-1085F17.4 NA 0.059 0-10% Testis 2.196175028 Normal NA NA boxplot CTC-510F12.6 NA chr19 11322156 11324195 + 2040 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-510F12.6 NA 0.224 10-20% NA NA Breast_cancer,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot RP11-1299A16.1 NA chr4 98713804 98713971 - 168 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1299A16.1 NA 0.012 50-60% Testis 4.906892038 HCC NA NA boxplot RP11-344A16.2 NA chr15 57720295 57720928 + 634 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-344A16.2 NA 0.024 90-100% Brain 4.906892038 CRC NA NA boxplot LINC00494 long intergenic non-protein coding RNA 494 chr20 48359950 48370629 + 10680 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00494 NA 0.718 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot RP11-368N21.1 NA chr16 29624517 29624825 + 309 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-368N21.1 NA 0.059 30-40% NA NA Normal,PAAD NA NA boxplot RP11-676J12.7 NA chr17 909632 911212 + 1581 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-676J12.7 NA 0.059 30-40% NA NA HCC,PAAD NA NA boxplot RP1-232L22__B.1 NA chrX 101778969 101780538 - 1570 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-232L22__B.1 NA 0.918 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-340F14.6 NA chr12 121190868 121191518 + 651 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-340F14.6 NA 0.012 80-90% NA NA Normal NA NA boxplot SUMO1P3 SUMO1 pseudogene 3 (functional) chr1 160317403 160317706 + 304 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SUMO1P3 NA 0.953 10-20% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot LINC01473 long intergenic non-protein coding RNA 1473 chr2 186032891 186083233 - 50343 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01473 exo_circ_053628,exo_circ_014932,exo_circ_014933,exo_circ_042000,exo_circ_003370,exo_circ_041999,exo_circ_036844,exo_circ_031537,exo_circ_025196 0.812 0-10% NA NA CHD,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-333A23.4 NA chr8 70471134 70485687 + 14554 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-333A23.4 NA 0.094 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-10C24.2 NA chr3 33793644 33794145 - 502 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-10C24.2 NA 0.047 80-90% NA NA HCC,Normal,PAAD NA NA boxplot RP1-97G4.1 NA chr12 77379820 77390864 + 11045 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-97G4.1 NA 0.012 50-60% Testis 4.906892038 NA NA NA boxplot POLR3GP2 polymerase (RNA) III (DNA directed) polypeptide G (32kD) pseudogene 2 chr18 48478561 48479228 + 668 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=POLR3GP2 NA 0.341 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-262H14.3 NA chr9 62856999 62898087 - 41089 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-262H14.3 NA 0.459 10-20% Testis 1.303508291 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot SPANXA2-OT1 SPANXA2 overlapping transcript 1 chrX 141502849 141649927 + 147079 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SPANXA2-OT1 NA 0.035 40-50% Testis 2.89538856 CRC,HCC NA NA boxplot ST13P13 suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein) pseudogene 13 chr10 103215709 103216800 + 1092 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ST13P13 NA 0.459 70-80% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot LRP4-AS1 LRP4 antisense RNA 1 chr11 46846412 46874396 + 27985 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LRP4-AS1 NA 0.259 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP3-523C21.3 NA chr6 132130252 132131795 - 1544 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-523C21.3 NA 0.024 70-80% NA NA HCC,Normal NA NA boxplot RP4-657D16.6 NA chr1 51801028 51801307 + 280 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-657D16.6 NA 0.035 20-30% NA NA CRC,Normal NA NA boxplot NBPF25P neuroblastoma breakpoint family member 25, pseudogene chr1 145572345 145607858 - 35514 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NBPF25P NA 0.965 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up),CRC(up),HCC(up),PAAD(up) NA boxplot CTD-2006H14.2 NA chr8 93715378 93716113 - 736 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2006H14.2 NA 0.2 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CH507-210P18.3 NA chr21 6897291 6899280 + 1990 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CH507-210P18.3 NA 0.024 80-90% NA NA CRC NA NA boxplot RP11-483I13.5 NA chr1 108199926 108201491 + 1566 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-483I13.5 NA 0.447 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot WWP1P1 WW domain containing E3 ubiquitin protein ligase 1 pseudogene 1 chr3 98657802 98660570 + 2769 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=WWP1P1 NA 0.282 90-100% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP4-625H18.2 NA chr6 19324988 19839080 - 514093 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-625H18.2 NA 0.012 70-80% NA NA Breast_cancer,Normal NA NA boxplot RPS23P1 ribosomal protein S23 pseudogene 1 chr8 97865054 97865485 + 432 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPS23P1 NA 0.012 80-90% NA NA NA NA NA boxplot RP11-1042B17.3 NA chr14 60515119 60554916 + 39798 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1042B17.3 NA 0.012 40-50% Pituitary 3.228015859 Breast_cancer,HCC NA NA boxplot ABC7-481722F1.1 NA chr7 37032 37477 + 446 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ABC7-481722F1.1 NA 0.024 60-70% NA NA CRC NA NA boxplot LINC01317 long intergenic non-protein coding RNA 1317 chr2 33706886 34297753 + 590868 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01317 exo_circ_003453 0.188 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CTD-2587H24.14 NA chr19 55227219 55230279 - 3061 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2587H24.14 NA 0.624 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RPS6P16 ribosomal protein S6 pseudogene 16 chr11 112235371 112236025 - 655 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPS6P16 NA 0.035 70-80% NA NA Normal NA NA boxplot RP5-902P8.12 NA chr1 1249777 1251334 - 1558 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-902P8.12 NA 0.024 40-50% NA NA CRC NA NA boxplot RP11-255H23.4 NA chr19 23817599 23874701 - 57103 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-255H23.4 NA 0.8 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot HMGN3-AS1 HMGN3 antisense RNA 1 chr6 79233718 79236797 + 3080 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HMGN3-AS1 NA 0.529 20-30% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-191N8.2 NA chr1 221827666 221840666 - 13001 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-191N8.2 NA 0.024 70-80% Testis 4.883964473 Breast_cancer,PAAD NA NA boxplot RP1-313I6.12 NA chr6 28078792 28081130 - 2339 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-313I6.12 NA 0.247 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC008132.15 NA chr22 18733914 18757906 + 23993 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC008132.15 NA 0.024 50-60% NA NA Breast_cancer,PAAD NA NA boxplot AC004603.4 NA chr19 42821863 42826878 + 5016 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC004603.4 NA 0.035 40-50% Brain 3.699054386 Breast_cancer,CRC,PAAD NA NA boxplot CROCCP2 ciliary rootlet coiled-coil, rootletin pseudogene 2 chr1 16618969 16644683 - 25715 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CROCCP2 NA 1 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up) NA boxplot LINC01539 long intergenic non-protein coding RNA 1539 chr18 56083356 56137536 - 54181 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01539 NA 0.012 20-30% NA NA Breast_cancer,HCC NA NA boxplot RP11-822E23.7 NA chr17 21519514 21521269 + 1756 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-822E23.7 NA 0.047 30-40% Testis 2.531113393 CRC,Normal NA NA boxplot LLNLR-470E3.1 NA chr19 51639478 51639931 - 454 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LLNLR-470E3.1 NA 0.188 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot HTT-AS HTT antisense RNA (head to head) chr4 3063471 3074514 - 11044 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HTT-AS NA 0.012 90-100% NA NA Breast_cancer,HCC NA NA boxplot AC116366.6 NA chr5 132468890 132473043 - 4154 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC116366.6 NA 0.294 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-3P22.2 NA chr7 69224696 69430923 - 206228 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-3P22.2 NA 0.012 0-10% Testis 4.906892038 Breast_cancer,Normal NA NA boxplot AC092798.2 NA chr3 25749488 25749896 + 409 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC092798.2 exo_circ_038576 0.012 90-100% NA NA Breast_cancer,CRC NA NA boxplot C6orf99 chromosome 6 open reading frame 99 chr6 158869939 158910353 + 40415 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=C6orf99 NA 0.082 50-60% Testis 4.478493557 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP5-851M4.1 NA chr20 23320958 23325352 - 4395 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-851M4.1 NA 0.012 90-100% NA NA Breast_cancer NA NA boxplot UST-AS1 UST antisense RNA 1 chr6 148955628 148964684 - 9057 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=UST-AS1 NA 0.024 60-70% NA NA Breast_cancer,HCC,Normal NA NA boxplot RP11-173A16.1 NA chr18 62300036 62300998 - 963 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-173A16.1 NA 0.024 40-50% NA NA CRC NA NA boxplot RP11-243J16.7 NA chr20 31686216 31716825 + 30610 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-243J16.7 NA 0.176 10-20% Testis 1.649973443 CRC,HCC,Normal,PAAD NA NA boxplot RP11-466A19.5 NA chr17 32529008 32530049 - 1042 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-466A19.5 NA 0.035 30-40% Testis 4.906892038 Breast_cancer,CRC,PAAD NA NA boxplot FENDRR FOXF1 adjacent non-coding developmental regulatory RNA chr16 86474529 86509099 - 34571 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FENDRR exo_circ_005418 0.859 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down) NA boxplot RP1-140C12.2 NA chr6 170414139 170419325 + 5187 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-140C12.2 NA 0.071 80-90% Testis 1.603724227 Breast_cancer,CRC,Normal,PAAD NA NA boxplot RP11-1094M14.11 NA chr17 35568120 35574792 + 6673 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1094M14.11 NA 0.765 10-20% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(up),PAAD(up) NA boxplot CTD-2256P15.1 NA chr5 10248325 10249915 + 1591 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2256P15.1 NA 0.024 70-80% NA NA Breast_cancer,Normal NA NA boxplot RP11-148O21.2 NA chr8 11558466 11560020 - 1555 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-148O21.2 NA 0.082 50-60% Spleen 3.034157334 Breast_cancer,Normal NA NA boxplot RP13-20L14.1 NA chr17 82381110 82382690 - 1581 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP13-20L14.1 NA 0.024 30-40% NA NA Breast_cancer,PAAD NA NA boxplot RP11-609L3.2 NA chr7 35933888 35934569 + 682 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-609L3.2 NA 0.024 50-60% NA NA PAAD NA NA boxplot RP11-217B7.3 NA chr9 104990796 104991781 - 986 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-217B7.3 exo_circ_052537 0.024 60-70% Testis 4.687788521 Breast_cancer,PAAD NA NA boxplot AC005522.6 NA chr7 76361768 76362113 + 346 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC005522.6 NA 0.012 80-90% Testis 4.906892038 HCC NA NA boxplot AACSP1 acetoacetyl-CoA synthetase pseudogene 1 chr5 178764861 178818435 - 53575 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AACSP1 NA 0.012 90-100% Testis 3.8561629 Breast_cancer NA NA boxplot RP11-340E6.1 NA chr3 141660536 141729405 + 68870 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-340E6.1 exo_circ_043746 0.059 60-70% Adrenal Gland 2.027386352 HCC,Normal,PAAD NA NA boxplot RP11-98O2.1 NA chr4 138773550 138801639 + 28090 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-98O2.1 NA 0.059 80-90% Brain 4.906892038 CRC,HCC,Normal,PAAD NA NA boxplot EMX2OS EMX2 opposite strand/antisense RNA chr10 117473215 117545068 - 71854 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=EMX2OS NA 0.118 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-305E6.4 NA chr10 30302826 30306066 - 3241 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-305E6.4 NA 0.247 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-254I22.3 NA chr5 96213346 96215075 - 1730 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-254I22.3 NA 0.012 30-40% Liver 3.642419393 NA NA NA boxplot AQP7P4 aquaporin 7 pseudogene 4 chr9 63127359 63143401 + 16043 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AQP7P4 NA 0.424 50-60% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot LINC00857 long intergenic non-protein coding RNA 857 chr10 80207710 80219657 + 11948 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00857 NA 0.094 10-20% NA NA Breast_cancer,HCC,PAAD NA NA boxplot AC090587.4 NA chr11 3854612 3855399 + 788 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC090587.4 NA 0.388 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-346E8.1 NA chrX 81363268 81364170 + 903 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-346E8.1 NA 0.141 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC108463.1 NA chr2 111195963 111206494 + 10532 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC108463.1 NA 0.047 80-90% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot THRB-AS1 THRB antisense RNA 1 chr3 24494087 24681711 + 187625 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=THRB-AS1 NA 0.047 50-60% NA NA Breast_cancer,CRC,PAAD NA NA boxplot RP11-126O1.6 NA chr18 58659858 58660524 + 667 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-126O1.6 NA 0.647 10-20% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down) NA boxplot RPSAP45 ribosomal protein SA pseudogene 45 chr6 112355841 112356714 - 874 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPSAP45 NA 0.059 90-100% NA NA Normal,PAAD NA NA boxplot AC005307.4 NA chr19 28437060 28535277 - 98218 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC005307.4 NA 0.576 10-20% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot RP11-141B14.1 NA chr2 113888203 113889750 - 1548 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-141B14.1 exo_circ_019182,exo_circ_048460 0.247 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CTB-61M7.1 NA chr19 54724496 54798285 + 73790 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTB-61M7.1 NA 0.024 40-50% NA NA Breast_cancer,CRC,Normal NA NA boxplot TEX26-AS1 TEX26 antisense RNA 1 chr13 30881933 30933846 - 51914 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TEX26-AS1 NA 0.012 80-90% Testis 2.494565004 Breast_cancer,PAAD NA NA boxplot RP5-1024G6.7 NA chr1 53220663 53224253 + 3591 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-1024G6.7 NA 0.047 70-80% Testis 2.339794781 Breast_cancer,CRC,Normal,PAAD NA NA boxplot AC079779.7 NA chr2 197569 202605 + 5037 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC079779.7 NA 0.012 0-10% Testis 4.546559178 Breast_cancer,CRC NA NA boxplot AC006129.2 NA chr19 41545192 41555462 + 10271 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC006129.2 NA 0.929 0-10% Spleen 1.899265294 Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot RP11-44F14.2 NA chr16 53373493 53384745 + 11253 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-44F14.2 NA 0.494 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),HCC(down),PAAD(down) NA boxplot POLHP1 polymerase (DNA directed), eta pseudogene 1 chr2 216156342 216156811 - 470 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=POLHP1 NA 0.012 80-90% NA NA Breast_cancer NA NA boxplot RPL21P75 ribosomal protein L21 pseudogene 75 chr7 20002765 20003247 + 483 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL21P75 NA 1 0-10% NA NA CHD,CRC,HCC,Normal,PAAD CHD(up),CRC(up),HCC(up),PAAD(up) NA boxplot RP1-261G23.7 NA chr6 43770429 43770616 - 188 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-261G23.7 NA 0.118 80-90% NA NA HCC,Normal NA NA boxplot AC012501.2 NA chr2 153421616 153593288 - 171673 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC012501.2 NA 0.024 30-40% Testis 4.906892038 Breast_cancer,PAAD NA NA boxplot RP11-45A17.4 NA chr10 131980240 131981337 + 1098 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-45A17.4 NA 0.024 80-90% NA NA Breast_cancer,CRC NA NA boxplot RP11-881M11.4 NA chr11 60918469 60925397 - 6929 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-881M11.4 NA 0.035 90-100% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot RP11-288C18.1 NA chr2 36839922 36842539 - 2618 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-288C18.1 NA 0.647 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),PAAD(up) NA boxplot CICP5 capicua transcriptional repressor pseudogene 5 chr1 223947605 223950416 + 2812 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CICP5 NA 0.012 10-20% NA NA Breast_cancer,HCC NA NA boxplot RP11-490M8.1 NA chr2 36354749 36355114 - 366 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-490M8.1 NA 0.224 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-460N11.2 NA chr9 64817870 64836341 + 18472 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-460N11.2 NA 0.176 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot SULT1C2P1 sulfotransferase family 1C member 2 pseudogene 1 chr2 108322238 108353799 + 31562 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SULT1C2P1 NA 0.035 30-40% NA NA Breast_cancer,Normal,PAAD NA NA boxplot RP11-968O1.5 NA chr12 109111218 109125594 + 14377 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-968O1.5 NA 0.341 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-181E10.3 NA chr2 111210995 111212476 - 1482 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-181E10.3 NA 0.082 30-40% NA NA CRC,Normal,PAAD NA NA boxplot DPYD-IT1 DPYD intronic transcript 1 chr1 97394154 97420141 - 25988 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DPYD-IT1 NA 0.106 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RPS26P35 ribosomal protein S26 pseudogene 35 chr8 118761856 118762201 - 346 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPS26P35 NA 0.012 60-70% NA NA PAAD NA NA boxplot RP11-1415C14.4 NA chr5 70197255 70207745 - 10491 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1415C14.4 NA 0.894 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(down) NA boxplot AC079922.3 NA chr2 112641832 112645690 - 3859 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC079922.3 NA 0.541 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-132F7.2 NA chr16 52436772 52437474 - 703 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-132F7.2 NA 0.024 90-100% NA NA HCC NA NA boxplot RP11-660L16.2 NA chr11 71448674 71452157 + 3484 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-660L16.2 NA 0.835 10-20% NA NA CRC,HCC,Normal,PAAD CHD(down),PAAD(down) NA boxplot HNRNPA1P24 heterogeneous nuclear ribonucleoprotein A1 pseudogene 24 chr3 149999645 150000690 + 1046 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HNRNPA1P24 NA 0.012 70-80% NA NA Breast_cancer NA NA boxplot RP11-275E15.2 NA chr15 21328380 21343881 - 15502 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-275E15.2 NA 0.035 50-60% NA NA HCC,Normal NA NA boxplot NFIA-AS2 NFIA antisense RNA 2 chr1 60940239 60970776 - 30538 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NFIA-AS2 NA 0.224 20-30% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot AC100830.3 NA chr15 64701248 64719602 + 18355 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC100830.3 NA 0.094 60-70% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot RP11-45A16.4 NA chr9 116288618 116318689 - 30072 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-45A16.4 NA 0.376 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot PLCL2-AS1 PLCL2 antisense RNA 1 chr3 17042742 17044192 - 1451 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PLCL2-AS1 NA 0.059 40-50% Heart 4.384371463 CRC,Normal,PAAD NA NA boxplot RPL12P4 ribosomal protein L12 pseudogene 4 chr20 55074644 55075140 + 497 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL12P4 NA 1 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CRC(down) NA boxplot CTA-126B4.7 NA chr22 42438023 42446195 + 8173 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTA-126B4.7 NA 0.059 90-100% NA NA CRC,Normal,PAAD NA NA boxplot RP11-391A7.1 NA chr2 63517892 63519268 - 1377 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-391A7.1 NA 0.047 40-50% NA NA Breast_cancer,CRC,Normal,PAAD NA NA boxplot RP11-354M1.2 NA chr16 68814330 68823526 - 9197 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-354M1.2 NA 0.129 60-70% NA NA CRC,HCC,Normal NA NA boxplot LINC00410 long intergenic non-protein coding RNA 410 chr13 90890954 90926597 - 35644 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00410 NA 0.012 90-100% Kidney 4.131861868 NA NA NA boxplot ST13P5 suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein) pseudogene 5 chr11 18261982 18263091 + 1110 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ST13P5 NA 1 0-10% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot LINC00294 long intergenic non-protein coding RNA 294 chr11 33076149 33079454 + 3306 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00294 NA 0.976 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up),PAAD(up) NA boxplot CTD-2081C10.5 NA chr5 54286194 54286331 - 138 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2081C10.5 exo_circ_029947,exo_circ_035369,exo_circ_003998 0.047 70-80% NA NA CRC,Normal NA NA boxplot CDC37L1-AS1 CDC37L1 antisense RNA 1 (head to head) chr9 4676600 4679502 - 2903 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CDC37L1-AS1 NA 0.788 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(up) NA boxplot FRMD8P1 FERM domain containing 8 pseudogene 1 chrX 65550898 65552421 - 1524 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FRMD8P1 NA 0.012 90-100% Brain 4.906892038 Breast_cancer,Normal NA NA boxplot RP11-373D23.3 NA chr2 28425945 28426719 + 775 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-373D23.3 NA 0.094 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot MIR31HG MIR31 host gene chr9 21455642 21559669 - 104028 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MIR31HG NA 0.094 40-50% NA NA Breast_cancer,HCC,Normal,PAAD NA Yes boxplot RP11-866E20.3 NA chr18 60010281 60014258 + 3978 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-866E20.3 NA 0.012 70-80% Testis 4.906892038 PAAD NA NA boxplot AC007950.1 NA chr15 63456294 63469351 - 13058 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC007950.1 NA 0.024 40-50% NA NA HCC,PAAD NA NA boxplot PPP1R11P2 protein phosphatase 1 regulatory inhibitor subunit 11 pseudogene 2 chrX 57229034 57229415 + 382 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PPP1R11P2 NA 0.153 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CH507-145C22.3 NA chr21 6667304 6670667 - 3364 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CH507-145C22.3 NA 0.106 80-90% NA NA HCC,Normal,PAAD NA NA boxplot RP11-353H3.1 NA chr3 43484972 43485880 - 909 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-353H3.1 NA 0.059 70-80% Thyroid 4.906892038 CRC,Normal,PAAD NA NA boxplot RP11-318M2.3 NA chr8 103228425 103229314 - 890 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-318M2.3 NA 0.165 30-40% NA NA HCC,Normal,PAAD NA NA boxplot GCSHP5 glycine cleavage system protein H pseudogene 5 chr1 168055901 168056422 - 522 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GCSHP5 NA 0.929 0-10% NA NA CHD,CRC,HCC,Normal,PAAD CRC(down),HCC(up),PAAD(up) NA boxplot RP4-798P15.3 NA chr1 177928788 178038007 - 109220 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-798P15.3 exo_circ_032502 0.871 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down) NA boxplot LNX1-AS2 LNX1 antisense RNA 2 chr4 53592956 53604047 + 11092 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LNX1-AS2 NA 0.082 60-70% NA NA CRC,HCC,Normal NA NA boxplot RP11-442G21.2 NA chr14 61801713 61803634 + 1922 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-442G21.2 NA 0.059 10-20% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CTA-345G4.1 NA chr16 23962951 23963351 + 401 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTA-345G4.1 NA 0.2 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-51J9.5 NA chr8 30155830 30156232 - 403 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-51J9.5 NA 0.494 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CTD-2196E14.6 NA chr16 23568673 23569696 + 1024 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2196E14.6 NA 0.024 30-40% NA NA CRC NA NA boxplot RP11-567P19.1 NA chr16 17445825 17446380 - 556 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-567P19.1 exo_circ_051649 0.082 60-70% NA NA CRC,Normal,PAAD NA NA boxplot HNRNPA1P39 heterogeneous nuclear ribonucleoprotein A1 pseudogene 39 chr2 174310015 174310974 - 960 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HNRNPA1P39 NA 0.024 80-90% Testis 4.906892038 Breast_cancer,CRC,Normal NA NA boxplot RP11-331F4.4 NA chr16 75226074 75228197 + 2124 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-331F4.4 NA 0.012 90-100% Pancreas 4.878975379 Breast_cancer,Normal NA NA boxplot LSM1P1 LSM1 homolog, mRNA degradation associated pseudogene 1 chr9 16775573 16775845 - 273 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LSM1P1 NA 0.012 90-100% NA NA CRC NA NA boxplot MIR223 microRNA 223 chrX 66015461 66020422 + 4962 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MIR223 NA 0.953 0-10% Whole Blood 3.822951036 CHD,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-425M5.7 NA chr20 37526642 37527060 - 419 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-425M5.7 NA 0.094 40-50% NA NA CRC,Normal,PAAD NA NA boxplot RP11-521L9.2 NA chr16 68933820 68937725 + 3906 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-521L9.2 NA 0.047 80-90% NA NA CRC,Normal NA NA boxplot SNHG17 small nucleolar RNA host gene 17 chr20 38420588 38435353 - 14766 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SNHG17 NA 0.929 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD PAAD(up) NA boxplot ANKRD20A17P ankyrin repeat domain 20 family member A17, pseudogene chr4 49502145 49506022 - 3878 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ANKRD20A17P NA 0.765 10-20% NA NA CHD,CRC,HCC,Normal,PAAD CHD(down),CRC(down) NA boxplot RP11-193F5.4 NA chr14 60972272 60972466 - 195 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-193F5.4 NA 0.235 80-90% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-61J19.5 NA chr1 212557833 212559731 - 1899 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-61J19.5 NA 0.294 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot TTTY14 testis-specific transcript, Y-linked 14 (non-protein coding) chrY 18872501 19077416 - 204916 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TTTY14 NA 0.541 0-10% NA NA CHD,CRC,HCC,Normal,PAAD CHD(down),CRC(down),PAAD(up) NA boxplot RP11-401F2.3 NA chr17 67244837 67245806 + 970 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-401F2.3 NA 0.271 60-70% Testis 1.347951049 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-54O7.14 NA chr1 1055033 1056116 + 1084 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-54O7.14 NA 0.071 70-80% NA NA CRC,HCC,Normal,PAAD NA NA boxplot LINC00265-3P long intergenic non-protein coding RNA 265-3, pseudogene chrY 25393154 25394056 - 903 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00265-3P NA 0.012 10-20% Testis 4.906892038 HCC NA NA boxplot LINC01587 long intergenic non-protein coding RNA 1587 chr4 5524569 5527801 + 3233 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01587 NA 0.012 0-10% NA NA Breast_cancer,HCC NA NA boxplot RP11-670E13.6 NA chr17 56914186 56914533 + 348 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-670E13.6 NA 0.129 70-80% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-68I3.5 NA chr17 29639627 29640825 + 1199 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-68I3.5 NA 0.024 70-80% Muscle 1.997141701 CRC NA NA boxplot RP11-488C13.5 NA chr14 76781733 76786724 - 4992 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-488C13.5 NA 0.765 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot RP11-58A18.1 NA chr16 86646301 86668923 + 22623 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-58A18.1 NA 0.024 60-70% Artery 3.089333952 PAAD NA NA boxplot RP11-56B16.4 NA chr15 51908902 51909642 - 741 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-56B16.4 NA 0.459 10-20% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot LINC01524 long intergenic non-protein coding RNA 1524 chr20 52210645 52650431 + 439787 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01524 NA 0.035 30-40% NA NA Breast_cancer,CRC,Normal NA NA boxplot CTD-2286N8.1 NA chr18 79144752 79146918 + 2167 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2286N8.1 NA 0.118 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot SEPHS1P6 selenophosphate synthetase 1 pseudogene 6 chr2 199659551 199660729 + 1179 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SEPHS1P6 NA 0.024 90-100% Brain 1.064403934 Breast_cancer,HCC,Normal NA NA boxplot KDM5C-IT1 KDM5C intronic transcript 1 chrX 53212408 53214679 - 2272 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KDM5C-IT1 NA 0.047 80-90% NA NA CRC,PAAD NA NA boxplot RP11-26J3.1 NA chr8 79769372 79871759 - 102388 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-26J3.1 exo_circ_050270 0.024 60-70% NA NA Breast_cancer,HCC NA NA boxplot RP3-405J10.2 NA chr12 50217662 50218343 - 682 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-405J10.2 NA 0.024 50-60% NA NA Breast_cancer,PAAD NA NA boxplot RP11-529G21.2 NA chr3 153156511 153161775 - 5265 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-529G21.2 NA 0.129 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-466A19.3 NA chr17 32518953 32531492 + 12540 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-466A19.3 NA 0.024 20-30% Testis 4.906892038 Breast_cancer,Normal,PAAD NA NA boxplot RP1-212P9.3 NA chr1 28870483 28877336 - 6854 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-212P9.3 NA 0.365 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-400N13.2 NA chr1 221966341 221984964 + 18624 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-400N13.2 NA 0.035 0-10% Lung 4.906892038 CRC,HCC NA NA boxplot RP5-1039K5.16 NA chr22 38032165 38034228 - 2064 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-1039K5.16 NA 0.024 80-90% Nerve 1.838123915 Breast_cancer,Normal NA NA boxplot RP11-746M1.1 NA chr17 20999747 21000323 + 577 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-746M1.1 NA 0.353 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CTC-559E9.4 NA chr19 19761038 19821716 - 60679 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-559E9.4 NA 0.188 70-80% NA NA HCC,Normal,PAAD NA NA boxplot MIR4458HG MIR4458 host gene chr5 8450743 8463095 + 12353 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MIR4458HG NA 0.941 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CRC(down),PAAD(up) NA boxplot SERBP1P5 SERPINE1 mRNA binding protein 1 pseudogene 5 chr4 78180866 78182046 - 1181 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SERBP1P5 NA 1 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down),CRC(down) NA boxplot ADGRF5P1 adhesion G protein-coupled receptor F5 pseudogene 1 chr9 62860873 62864957 - 4085 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ADGRF5P1 NA 0.129 50-60% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot DDX12P DEAD/H-box helicase 12, pseudogene chr12 9418673 9448229 - 29557 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DDX12P NA 0.824 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up),CRC(up),PAAD(up) NA boxplot RP11-30L15.4 NA chr8 53971231 53974210 + 2980 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-30L15.4 NA 0.035 0-10% NA NA Normal,PAAD NA NA boxplot RP11-307P22.1 NA chr14 60779978 60780595 + 618 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-307P22.1 NA 0.082 40-50% Testis 4.506122971 HCC,Normal,PAAD NA NA boxplot MTND4P32 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 pseudogene 32 chrX 102799942 102801399 + 1458 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MTND4P32 NA 0.024 30-40% NA NA PAAD NA NA boxplot RP11-727F15.12 NA chr11 62786023 62786785 - 763 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-727F15.12 NA 0.341 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-56B16.5 NA chr15 51887560 51901123 - 13564 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-56B16.5 NA 0.106 60-70% Testis 2.505196813 CRC,HCC,Normal NA NA boxplot PCF11-AS1 PCF11 anstisense RNA 1 chr11 83185521 83187036 - 1516 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PCF11-AS1 NA 0.129 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-602N24.3 NA chr4 109815047 109815410 - 364 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-602N24.3 NA 0.012 80-90% Testis 1.296265801 Breast_cancer,CRC,Normal NA NA boxplot BOK-AS1 BOK antisense RNA 1 chr2 241544403 241558977 - 14575 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=BOK-AS1 NA 0.024 70-80% NA NA Breast_cancer,HCC NA NA boxplot HAUS1P2 HAUS augmin like complex subunit 1 pseudogene 2 chrX 18865771 18866554 + 784 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HAUS1P2 NA 0.012 70-80% Prostate 3.964306873 Breast_cancer NA NA boxplot RP11-474G23.2 NA chr2 68179833 68180532 + 700 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-474G23.2 NA 0.388 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot GS1-124K5.11 RAB guanine nucleotide exchange factor (GEF) 1 pseudogene chr7 66526088 66542624 - 16537 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GS1-124K5.11 NA 0.682 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-394B2.7 NA chr16 70768356 70768785 + 430 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-394B2.7 NA 0.012 90-100% NA NA Breast_cancer,HCC NA NA boxplot AC114730.8 NA chr2 241734715 241735498 - 784 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC114730.8 NA 0.106 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-214K3.23 NA chr12 123960717 123961244 - 528 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-214K3.23 NA 0.047 50-60% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot RP5-933E2.1 NA chr10 10058722 10063502 + 4781 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-933E2.1 NA 0.012 20-30% Testis 4.906892038 Normal NA NA boxplot RP11-3K24.1 NA chr17 60245288 60245647 - 360 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-3K24.1 NA 0.141 40-50% NA NA CRC,HCC,Normal NA NA boxplot CH507-254M2.3 NA chr21 6721812 6725209 + 3398 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CH507-254M2.3 NA 0.071 40-50% NA NA HCC,PAAD NA NA boxplot AC007292.7 NA chr19 4339577 4343491 + 3915 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC007292.7 NA 0.012 90-100% NA NA Breast_cancer,HCC,Normal NA NA boxplot AC092535.3 NA chr4 1151372 1153701 + 2330 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC092535.3 NA 0.094 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CTD-2561B21.5 NA chr17 80966239 80971213 - 4975 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2561B21.5 NA 0.282 40-50% Spleen 4.316549782 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-347C18.3 NA chr8 94950037 94951396 + 1360 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-347C18.3 NA 0.294 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-567G24.1 NA chr1 240142670 240145389 - 2720 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-567G24.1 NA 0.271 90-100% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CTD-2292M16.7 NA chr14 20305730 20306811 + 1082 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2292M16.7 NA 0.024 70-80% Testis 4.906892038 CRC,HCC,Normal NA NA boxplot AC005220.3 NA chr20 53940160 53942508 + 2349 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC005220.3 NA 0.047 60-70% NA NA HCC,Normal,PAAD NA NA boxplot RPSAP50 ribosomal protein SA pseudogene 50 chr11 109982192 109983043 + 852 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPSAP50 NA 0.035 10-20% NA NA Breast_cancer,Normal NA NA boxplot HNRNPA1P67 heterogeneous nuclear ribonucleoprotein A1 pseudogene 67 chr4 72807267 72808192 + 926 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HNRNPA1P67 NA 0.071 90-100% NA NA CRC,HCC,Normal,PAAD NA NA boxplot MAPT-IT1 MAPT intronic transcript 1 chr17 45895783 45898798 + 3016 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MAPT-IT1 NA 0.012 60-70% NA NA Breast_cancer NA NA boxplot ATP6V0E2-AS1 ATP6V0E2 antisense RNA 1 chr7 149867697 149880610 - 12914 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ATP6V0E2-AS1 NA 0.506 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC105393.1 NA chr2 388412 416885 + 28474 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC105393.1 NA 0.024 80-90% Testis 3.941655944 Breast_cancer,Normal NA NA boxplot YBX1P4 Y-box binding protein 1 pseudogene 4 chr7 152128879 152129686 + 808 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=YBX1P4 NA 0.047 70-80% NA NA Breast_cancer,HCC,Normal NA NA boxplot RP1-41C23.2 NA chr17 31533171 31533938 - 768 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-41C23.2 NA 0.176 30-40% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot RP11-79M19.2 NA chr10 119330233 119336182 - 5950 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-79M19.2 NA 0.024 80-90% Testis 1.932715922 Breast_cancer,HCC,Normal NA NA boxplot AC064875.2 NA chr2 12966784 13007013 - 40230 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC064875.2 NA 0.035 40-50% Nerve 1.461472953 CRC,PAAD NA NA boxplot RP11-421K23.1 NA chr2 89203509 89203906 - 398 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-421K23.1 NA 0.071 80-90% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot KB-1517D11.2 NA chr8 98412882 98413784 - 903 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KB-1517D11.2 NA 0.035 80-90% NA NA Breast_cancer,HCC,PAAD NA NA boxplot CCDC144NL-AS1 CCDC144NL antisense RNA 1 chr17 20868433 21002276 + 133844 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CCDC144NL-AS1 NA 0.4 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot LINC01372 long intergenic non-protein coding RNA 1372 chr7 67335976 67340024 + 4049 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01372 NA 0.082 10-20% NA NA CRC,HCC,Normal NA NA boxplot OR51R1P olfactory receptor family 51 subfamily R member 1 pseudogene chr11 4418060 4419011 + 952 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=OR51R1P NA 0.071 60-70% NA NA CRC,Normal NA NA boxplot RP11-381P6.1 NA chr17 20963722 20980238 + 16517 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-381P6.1 NA 0.035 70-80% Testis 4.244072266 HCC NA NA boxplot RP11-867G2.8 NA chr11 94545330 94740355 - 195026 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-867G2.8 NA 0.153 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP1-20N2.8 NA chr6 143484979 143507327 + 22349 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-20N2.8 exo_circ_055115,exo_circ_044405 0.318 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot MKNK1-AS1 MKNK1 antisense RNA 1 chr1 46538696 46570255 + 31560 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MKNK1-AS1 NA 0.082 80-90% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot LINC00384 long intergenic non-protein coding RNA 384 chr13 30151886 30159621 - 7736 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00384 NA 0.094 80-90% Testis 4.175289512 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot OR7E31P olfactory receptor family 7 subfamily E member 31 pseudogene chr9 90216039 90216924 + 886 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=OR7E31P NA 0.012 90-100% Testis 4.906892038 Breast_cancer,HCC,Normal NA NA boxplot RP11-459O16.8 NA chr9 42981772 42988167 + 6396 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-459O16.8 NA 0.188 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot E2F6P1 E2F transcription factor 6 pseudogene 1 chr22 18833694 18834438 + 745 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=E2F6P1 NA 0.682 10-20% NA NA CHD,CRC,HCC,Normal,PAAD CRC(down) NA boxplot CCDC150P1 coiled-coil domain containing 150 pseudogene 1 chr12 122322122 122324336 - 2215 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CCDC150P1 NA 0.176 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD PAAD(up) NA boxplot RP11-571F15.3 NA chr9 34223984 34224628 - 645 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-571F15.3 NA 0.012 80-90% NA NA HCC NA NA boxplot ACTA2-AS1 ACTA2 antisense RNA 1 chr10 88932390 88940820 + 8431 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ACTA2-AS1 NA 0.412 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CTB-178M22.1 NA chr5 168085329 168187719 - 102391 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTB-178M22.1 NA 0.012 50-60% NA NA Breast_cancer NA NA boxplot RP11-481G8.2 NA chr10 79000484 79003803 - 3320 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-481G8.2 NA 0.012 90-100% Testis 3.399641349 Breast_cancer,CRC NA NA boxplot RP11-143A12.3 NA chr5 8839732 8881525 + 41794 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-143A12.3 NA 0.012 60-70% Testis 4.121284896 Breast_cancer,HCC NA NA boxplot UNGP3 uracil-DNA glycosylase pseudogene 3 chr14 81259565 81260239 - 675 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=UNGP3 NA 0.224 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-546D6.3 NA chr12 123152324 123153377 - 1054 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-546D6.3 NA 0.576 10-20% NA NA CRC,HCC,Normal,PAAD CHD(down),HCC(down) NA boxplot RP3-414A15.10 NA chr14 73616700 73633941 - 17242 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-414A15.10 NA 0.047 40-50% NA NA Breast_cancer,Normal,PAAD NA NA boxplot RP11-504A18.1 NA chr1 56248294 56258571 - 10278 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-504A18.1 NA 0.071 50-60% NA NA HCC,Normal,PAAD NA NA boxplot KRT18P55 keratin 18 pseudogene 55 chr17 28275986 28317783 - 41798 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KRT18P55 NA 0.012 90-100% Testis 4.884576711 NA NA NA boxplot LINC00944 long intergenic non-protein coding RNA 944 chr12 126729787 126772411 - 42625 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00944 NA 0.576 20-30% Testis 2.652525277 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC084117.3 NA chr11 18405609 18406731 + 1123 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC084117.3 NA 0.071 40-50% NA NA CRC,Normal,PAAD NA NA boxplot RP11-708L7.6 NA chr11 112015307 112016124 + 818 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-708L7.6 NA 0.012 90-100% NA NA NA NA NA boxplot CDKN2B-AS1 CDKN2B antisense RNA 1 chr9 21994778 22121097 + 126320 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CDKN2B-AS1 exo_circ_014569 0.635 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CRC(up),HCC(up),PAAD(up) NA boxplot RP11-25B7.1 NA chr1 201673105 201674144 - 1040 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-25B7.1 NA 0.012 70-80% Testis 4.906892038 Breast_cancer,Normal NA NA boxplot TEX41 testis expressed 41 (non-protein coding) chr2 144667967 145262988 + 595022 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TEX41 NA 0.082 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC009299.2 NA chr2 161222785 161308303 - 85519 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC009299.2 NA 0.035 20-30% Testis 1.707292805 CRC,HCC,Normal,PAAD NA NA boxplot RPL29P11 ribosomal protein L29 pseudogene 11 chr3 37016523 37017014 - 492 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL29P11 NA 0.753 40-50% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot TNRC6C-AS1 TNRC6C antisense RNA 1 chr17 78107398 78111799 - 4402 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TNRC6C-AS1 NA 0.906 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down),HCC(down) NA boxplot LINC01510 long intergenic non-protein coding RNA 1510 chr7 116570960 116614820 - 43861 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01510 NA 0.035 10-20% NA NA Breast_cancer,CRC,PAAD NA NA boxplot RP11-616M22.3 NA chr16 1206560 1207124 - 565 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-616M22.3 NA 0.024 80-90% NA NA Breast_cancer,CRC,PAAD NA NA boxplot TYMSOS TYMS opposite strand chr18 641320 658340 - 17021 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TYMSOS NA 0.365 40-50% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up) NA boxplot RP3-476K8.3 NA chr1 26462756 26467282 - 4527 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-476K8.3 exo_circ_008258 0.388 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-219E7.1 NA chr14 20783888 20784293 + 406 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-219E7.1 NA 0.306 30-40% Spleen 1.256274408 CRC,HCC,Normal,PAAD NA NA boxplot RP11-274H2.5 NA chr3 146059585 146061679 - 2095 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-274H2.5 NA 0.059 30-40% NA NA HCC,Normal,PAAD NA NA boxplot AMD1P4 adenosylmethionine decarboxylase 1 pseudogene 4 chr6 11861626 11862970 - 1345 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AMD1P4 NA 0.012 90-100% NA NA HCC NA NA boxplot CTC-312O10.2 NA chr19 6898299 6898686 + 388 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-312O10.2 NA 0.106 70-80% NA NA CRC,HCC,Normal NA NA boxplot RP1-72A23.4 NA chr6 88964527 88966587 + 2061 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-72A23.4 NA 0.012 90-100% NA NA Breast_cancer NA NA boxplot RP1-287H17.1 NA chr6 134706060 134707349 - 1290 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-287H17.1 NA 0.012 10-20% Testis 4.906892038 PAAD NA NA boxplot RP11-155L15.1 NA chr5 56313905 56321397 - 7493 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-155L15.1 NA 0.012 20-30% Testis 4.319368535 Breast_cancer,Normal NA NA boxplot FTH1P12 ferritin, heavy polypeptide 1 pseudogene 12 chr9 15527133 15527683 - 551 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FTH1P12 NA 0.118 90-100% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-269G24.7 NA chr17 63393355 63393586 + 232 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-269G24.7 NA 0.035 70-80% NA NA Normal NA NA boxplot RP11-151A6.4 NA chr13 100535741 100587146 - 51406 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-151A6.4 NA 0.282 50-60% Testis 1.032250479 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-406H4.1 NA chr12 99093359 99105011 + 11653 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-406H4.1 NA 0.047 50-60% Testis 4.411559174 CRC,Normal NA NA boxplot RBMXP4 RNA binding motif protein, X-linked pseudogene 4 chr4 109346326 109347459 - 1134 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RBMXP4 NA 0.447 70-80% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot KARSP2 lysyl-tRNA synthetase pseudogene 2 chr13 113130416 113132054 + 1639 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KARSP2 NA 0.012 10-20% Testis 2.987603216 Breast_cancer,HCC NA NA boxplot CTB-175E5.7 NA chr17 44198882 44216565 + 17684 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTB-175E5.7 NA 0.224 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot FAM27D1 family with sequence similarity 27 member D1 chr9 41644430 41644770 - 341 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FAM27D1 NA 0.012 90-100% NA NA PAAD NA NA boxplot AC104135.2 NA chr2 74919555 74924846 - 5292 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC104135.2 NA 0.129 10-20% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-296A18.5 NA chr1 51250603 51251472 - 870 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-296A18.5 NA 0.176 80-90% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-182J1.3 NA chr15 84622015 84623237 - 1223 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-182J1.3 NA 0.729 20-30% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(down) NA boxplot RP13-638C3.2 NA chr17 82578023 82578616 + 594 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP13-638C3.2 NA 0.106 70-80% NA NA CRC,Normal,PAAD NA NA boxplot RP3-354N19.3 NA chr6 119269133 119269714 - 582 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-354N19.3 NA 0.2 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot C11orf44 chromosome 11 open reading frame 44 chr11 130672956 130717352 + 44397 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=C11orf44 NA 0.024 10-20% NA NA Breast_cancer,PAAD NA NA boxplot AKR1B1P1 aldehyde reductase family 1, member B1 pseudogene 1 chr1 224574434 224575389 + 956 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AKR1B1P1 NA 0.024 40-50% Ovary 3.546672945 Breast_cancer,PAAD NA NA boxplot RP11-380G5.2 NA chr10 87878692 87880427 + 1736 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-380G5.2 exo_circ_004709,exo_circ_018121,exo_circ_039621 0.753 10-20% NA NA CRC,HCC,Normal,PAAD CHD(down),HCC(down),PAAD(down) NA boxplot PRICKLE2-AS1 PRICKLE2 antisense RNA 1 chr3 64099273 64101122 + 1850 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PRICKLE2-AS1 NA 0.271 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot LINC01603 long intergenic non-protein coding RNA 1603 chr8 69425035 69448244 - 23210 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01603 NA 0.012 70-80% NA NA HCC NA NA boxplot RP4-545L17.11 NA chr20 1117847 1118450 - 604 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-545L17.11 NA 0.176 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot AC092675.3 NA chr2 98331389 98356005 - 24617 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC092675.3 NA 0.024 30-40% Pituitary 3.33737182 Breast_cancer,PAAD NA NA boxplot RP4-738P15.6 NA chr20 25226448 25226735 - 288 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-738P15.6 NA 0.059 60-70% NA NA HCC,Normal NA NA boxplot RP11-542K23.9 NA chr9 122471358 122475817 + 4460 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-542K23.9 NA 0.071 10-20% Testis 4.193503082 HCC,Normal NA NA boxplot RP11-834C11.4 NA chr12 54126098 54142493 + 16396 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-834C11.4 NA 0.388 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot LINC01332 long intergenic non-protein coding RNA 1332 chr5 74327995 74334766 - 6772 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01332 NA 0.012 50-60% NA NA Normal NA NA boxplot RP11-160H12.2 NA chr11 83643602 83725390 + 81789 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-160H12.2 NA 0.012 50-60% Testis 3.766567176 NA NA NA boxplot RP11-930P14.1 NA chr8 41660991 41665566 + 4576 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-930P14.1 NA 0.212 10-20% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot RP11-1072C15.4 NA chr17 44673689 44676257 - 2569 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1072C15.4 NA 0.129 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-319G9.5 NA chr16 78994345 79004730 + 10386 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-319G9.5 exo_circ_057437,exo_circ_017795 0.553 30-40% Testis 1.556439677 CRC,HCC,Normal,PAAD NA NA boxplot RP3-512B11.3 NA chr6 7540451 7541338 - 888 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-512B11.3 NA 0.071 40-50% NA NA Breast_cancer,Normal,PAAD NA NA boxplot CUBNP2 cubilin (intrinsic factor-cobalamin receptor) pseudogene 2 chr10 45232026 45247361 - 15336 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CUBNP2 NA 0.024 80-90% Testis 4.477148745 Breast_cancer,HCC,Normal NA NA boxplot RP11-80I15.4 NA chr9 95113708 95114461 + 754 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-80I15.4 NA 0.024 60-70% NA NA HCC NA NA boxplot bP-21264C1.1 NA chr21 9369285 9376645 - 7361 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=bP-21264C1.1 NA 0.576 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP4-612B18.3 NA chr1 171803517 171803939 + 423 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-612B18.3 NA 0.012 90-100% NA NA Breast_cancer,CRC,Normal NA NA boxplot CTA-14H9.5 NA chr6 26527063 26527404 + 342 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTA-14H9.5 NA 0.2 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot SLC25A5P1 solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 5 pseudogene 1 chr22 42001069 42001966 - 898 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SLC25A5P1 NA 0.012 40-50% Testis 1.136928441 Normal NA NA boxplot RP11-1H8.5 NA chr15 34415450 34420273 - 4824 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1H8.5 NA 0.094 20-30% NA NA CRC,HCC,PAAD NA NA boxplot CTD-2659N19.2 NA chr19 12688922 12689238 + 317 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2659N19.2 NA 0.024 80-90% NA NA CRC,Normal,PAAD NA NA boxplot RP11-421F16.3 NA chr12 26971586 26979582 + 7997 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-421F16.3 NA 0.071 20-30% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot HIST2H3DP1 histone cluster 2, H3d pseudogene 1 chr1 121118195 121118610 - 416 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HIST2H3DP1 NA 0.188 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot HEIH hepatocellular carcinoma up-regulated EZH2-associated long non-coding RNA chr5 180829954 180831605 - 1652 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HEIH NA 1 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-256I23.3 NA chr2 219645090 219645631 + 542 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-256I23.3 NA 0.012 0-10% NA NA PAAD NA NA boxplot RP4-758J18.2 NA chr1 1399522 1402046 + 2525 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-758J18.2 NA 0.929 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot SDCCAG3P2 serologically defined colon cancer antigen 3 pseudogene 2 chr1 175044626 175045648 - 1023 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SDCCAG3P2 NA 0.082 80-90% NA NA Breast_cancer,HCC,Normal NA NA boxplot RP3-508I15.9 NA chr22 38667585 38681820 - 14236 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-508I15.9 NA 0.482 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CTD-2047H16.4 NA chr17 80351828 80415168 - 63341 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2047H16.4 NA 0.435 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot MAPRE1P3 MAPRE1 pseudogene 3 chr2 165285253 165286048 + 796 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MAPRE1P3 NA 0.012 80-90% NA NA CRC NA NA boxplot RP11-386G11.11 NA chr12 49075039 49075802 + 764 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-386G11.11 NA 0.012 90-100% NA NA Normal,PAAD NA NA boxplot NCK1-AS1 NCK1 antisense RNA 1 (head to head) chr3 136841726 136862054 - 20329 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NCK1-AS1 exo_circ_032949,exo_circ_038488 0.929 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-104O19.4 NA chr17 4267691 4268430 + 740 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-104O19.4 NA 0.024 60-70% NA NA Breast_cancer,CRC,HCC,PAAD NA NA boxplot RP1-118J21.5 NA chr1 39897745 39899098 + 1354 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-118J21.5 NA 0.071 50-60% NA NA CRC,Normal NA NA boxplot RP11-202G18.1 NA chr9 111139246 111284836 - 145591 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-202G18.1 NA 0.094 40-50% Testis 3.567119224 CRC,Normal,PAAD NA NA boxplot CLEC4GP1 C-type lectin domain family 4 member G pseudogene 1 chr19 7787549 7790621 + 3073 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CLEC4GP1 NA 0.012 70-80% Adrenal Gland 1.62090775 Breast_cancer,CRC NA NA boxplot RP5-1198O20.4 NA chr1 44030443 44115913 + 85471 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-1198O20.4 NA 0.624 10-20% Testis 1.521565176 Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),PAAD(up) NA boxplot AC093375.1 NA chr2 156011530 156254950 - 243421 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC093375.1 exo_circ_048520 0.129 20-30% NA NA HCC,Normal,PAAD NA NA boxplot AC000078.5 NA chr22 19887289 19887970 + 682 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC000078.5 NA 0.024 10-20% NA NA Breast_cancer,Normal NA NA boxplot FMR1-AS1 FMR1 antisense RNA 1 chrX 147909431 147911817 - 2387 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FMR1-AS1 NA 0.024 80-90% NA NA PAAD NA NA boxplot RP13-786C16.1 NA chr11 33880643 33881800 + 1158 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP13-786C16.1 NA 0.047 50-60% NA NA Breast_cancer,CRC,Normal NA NA boxplot RP11-272L13.2 NA chr1 97774669 97775026 + 358 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-272L13.2 NA 0.024 70-80% NA NA CRC,PAAD NA NA boxplot HMMR-AS1 HMMR antisense RNA 1 chr5 163483065 163494058 - 10994 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HMMR-AS1 NA 0.082 70-80% NA NA HCC,Normal NA NA boxplot CTD-2517M22.14 NA chr8 144495458 144505444 - 9987 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2517M22.14 NA 0.318 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-637C24.5 NA chr17 78008421 78008855 + 435 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-637C24.5 exo_circ_040444 0.024 80-90% NA NA CRC,HCC NA NA boxplot RP11-303G3.6 NA chr8 12580287 12581063 + 777 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-303G3.6 NA 0.024 70-80% NA NA Normal NA NA boxplot AC011294.3 NA chr7 46673785 46759851 - 86067 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC011294.3 NA 0.024 30-40% NA NA Breast_cancer,HCC,PAAD NA NA boxplot RP11-490H24.5 NA chr12 104030779 104031543 + 765 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-490H24.5 NA 0.929 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(up),PAAD(up) NA boxplot RP1-257A7.4 NA chr6 13264861 13295586 - 30726 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-257A7.4 NA 0.847 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-474O21.5 NA chr1 12618900 12619244 - 345 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-474O21.5 NA 0.435 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RPL12P1 ribosomal protein L12 pseudogene 1 chr6 33400059 33400556 - 498 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL12P1 NA 0.294 90-100% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-51I5.1 NA chr2 73877566 73878862 + 1297 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-51I5.1 NA 0.012 80-90% NA NA Breast_cancer NA NA boxplot RP11-1360M22.10 NA chr15 19955300 19955602 - 303 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1360M22.10 NA 0.012 90-100% NA NA Normal NA NA boxplot LINC01554 long intergenic non-protein coding RNA 1554 chr5 95852232 95860133 + 7902 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01554 NA 0.118 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RSU1P3 Ras suppressor protein 1 pseudogene 3 chr10 51319826 51320660 + 835 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RSU1P3 exo_circ_056149,exo_circ_031972,exo_circ_039572,exo_circ_047642,exo_circ_030657,exo_circ_050633,exo_circ_039573 0.035 80-90% NA NA Breast_cancer,PAAD NA NA boxplot RP11-218E20.3 NA chr14 50956259 50962002 - 5744 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-218E20.3 NA 0.035 20-30% Adrenal Gland 1.646080381 Breast_cancer,Normal NA NA boxplot ZNF542P zinc finger protein 542, pseudogene chr19 56368099 56379828 + 11730 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ZNF542P NA 1 0-10% NA NA CHD,CRC,HCC,Normal,PAAD CHD(down),HCC(down) NA boxplot GS1-519E5.1 NA chrX 9249920 9275206 + 25287 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GS1-519E5.1 NA 0.012 30-40% Brain 3.758162345 Breast_cancer,HCC NA NA boxplot RP11-274B21.13 NA chr7 128617865 128625905 + 8041 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-274B21.13 NA 0.635 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot AP001625.4 NA chr21 42496539 42497443 + 905 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AP001625.4 NA 0.188 60-70% Testis 4.179307712 CRC,HCC,Normal,PAAD NA NA boxplot RP11-576N17.5 NA chr4 83233512 83247213 - 13702 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-576N17.5 NA 0.141 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-359E3.4 NA chr10 86749754 86756298 - 6545 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-359E3.4 NA 0.059 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot HMGA1P2 high mobility group AT-hook 1 pseudogene 2 chr4 73098822 73099145 + 324 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HMGA1P2 NA 0.024 90-100% NA NA Breast_cancer,CRC,Normal NA NA boxplot RP11-644C3.1 NA chr3 176643941 176867838 - 223898 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-644C3.1 NA 0.012 90-100% Testis 4.906892038 CRC NA NA boxplot RP11-496I2.4 NA chr14 19228924 19244931 - 16008 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-496I2.4 NA 0.012 90-100% Testis 4.906892038 NA NA NA boxplot RPS2P44 ribosomal protein S2 pseudogene 44 chr16 48577524 48578369 - 846 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPS2P44 NA 0.153 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot C12orf77 chromosome 12 open reading frame 77 chr12 24993424 25006403 - 12980 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=C12orf77 NA 0.082 50-60% Spleen 4.096900209 Breast_cancer,HCC,Normal NA NA boxplot RP11-831A10.2 NA chr11 119987954 119995037 - 7084 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-831A10.2 NA 0.035 50-60% Testis 4.832472058 Breast_cancer,Normal,PAAD NA NA boxplot AC074117.10 NA chr2 27356246 27367622 + 11377 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC074117.10 NA 0.776 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CRC(up),PAAD(up) NA boxplot AC009303.3 NA chr2 117934025 117934789 - 765 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC009303.3 NA 0.024 60-70% NA NA Breast_cancer,PAAD NA NA boxplot RP11-1029F8.1 NA chr12 64032412 64032665 + 254 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1029F8.1 NA 0.012 20-30% Cervix 4.906892038 Breast_cancer NA NA boxplot NORAD non-coding RNA activated by DNA damage chr20 36045622 36050960 - 5339 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NORAD NA 0.929 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-867G2.5 NA chr11 94638038 94640833 + 2796 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-867G2.5 NA 0.047 80-90% Testis 4.906892038 CRC,HCC,Normal,PAAD NA NA boxplot AC123886.2 NA chr2 110610916 110612404 + 1489 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC123886.2 NA 0.012 60-70% NA NA HCC NA NA boxplot CTD-2287O16.1 NA chr5 116051917 116052289 - 373 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2287O16.1 NA 0.929 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(down) NA boxplot CTC-487M23.5 NA chr5 112893333 112894001 + 669 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-487M23.5 NA 0.353 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-120I21.3 NA chr8 84163449 84164564 - 1116 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-120I21.3 NA 0.012 70-80% Brain 4.906892038 Breast_cancer,Normal NA NA boxplot AC005237.4 NA chr2 241015599 241064116 - 48518 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC005237.4 NA 0.047 40-50% NA NA CRC,Normal NA NA boxplot RP11-83J21.3 NA chr9 130933851 130945520 + 11670 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-83J21.3 NA 0.012 90-100% Testis 4.437098514 Breast_cancer NA NA boxplot RP11-342A23.2 NA chr15 83962176 83962583 + 408 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-342A23.2 NA 0.012 90-100% NA NA PAAD NA NA boxplot RP11-288C17.1 NA chr18 1362445 1363873 - 1429 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-288C17.1 NA 0.047 60-70% Testis 4.623826224 CRC,HCC NA NA boxplot LACTB2-AS1 LACTB2 antisense RNA 1 chr8 70608577 70663279 + 54703 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LACTB2-AS1 NA 0.271 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-320M2.1 NA chr2 10448694 10451327 + 2634 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-320M2.1 NA 0.482 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-447H19.3 NA chr5 43206709 43207811 + 1103 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-447H19.3 NA 0.047 10-20% Pituitary 2.686177761 CRC,PAAD NA NA boxplot CTB-102L5.8 NA chr19 38199836 38200934 + 1099 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTB-102L5.8 NA 0.024 60-70% NA NA Breast_cancer,HCC,PAAD NA NA boxplot PSMC1P1 proteasome (prosome, macropain) 26S subunit, ATPase, 1 pseudogene 1 chr3 68635705 68637024 + 1320 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PSMC1P1 NA 1 0-10% NA NA CHD,CRC,HCC,Normal,PAAD CRC(down) NA boxplot RP5-1061H20.3 NA chr1 229270927 229271599 - 673 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-1061H20.3 NA 0.659 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC106782.20 NA chr16 30875766 30895216 - 19451 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC106782.20 NA 0.118 90-100% NA NA CRC,Normal,PAAD NA NA boxplot PCMTD1P2 protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1 pseudogene 2 chr16 34139189 34139543 + 355 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PCMTD1P2 NA 0.012 90-100% NA NA HCC,Normal,PAAD NA NA boxplot RP4-568B10.1 NA chr7 106035798 106036431 + 634 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-568B10.1 NA 0.035 20-30% NA NA CRC,Normal NA NA boxplot RP11-618I10.2 NA chr4 69346609 69358177 + 11569 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-618I10.2 NA 0.035 10-20% Testis 4.906892038 HCC,Normal NA NA boxplot CTD-2223O18.1 NA chr14 104137150 104137898 - 749 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2223O18.1 NA 0.094 60-70% Testis 1.400411279 Breast_cancer,CRC,HCC,Normal NA NA boxplot SLC25A1P5 solute carrier family 25 (mitochondrial carrier; citrate transporter), member 1 pseudogene 5 chr19 27805423 27806205 - 783 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SLC25A1P5 NA 0.082 70-80% NA NA Breast_cancer,CRC,Normal NA NA boxplot MTND3P17 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 3 pseudogene 17 chr2 202617284 202617627 + 344 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MTND3P17 NA 0.012 90-100% NA NA NA NA NA boxplot RP11-355I22.5 NA chr14 62069518 62081154 - 11637 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-355I22.5 NA 0.012 0-10% NA NA PAAD NA NA boxplot MIF-AS1 MIF antisense RNA 1 chr22 23894426 23898930 - 4505 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MIF-AS1 NA 0.659 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot RPL21P120 ribosomal protein L21 pseudogene 120 chr17 21504558 21505059 + 502 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL21P120 NA 0.765 40-50% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot LINC01484 long intergenic non-protein coding RNA 1484 chr5 173707614 173746211 - 38598 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01484 NA 0.212 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC007041.2 NA chr2 20239892 20241046 - 1155 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC007041.2 NA 0.306 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot SLC25A30-AS1 SLC25A30 antisense RNA 1 chr13 45418162 45420371 + 2210 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SLC25A30-AS1 NA 0.259 50-60% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot GTF2F2P1 general transcription factor IIF subunit 2 pseudogene 1 chr4 147506091 147506765 + 675 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GTF2F2P1 NA 0.024 30-40% NA NA PAAD NA NA boxplot RP11-208N20.1 NA chr4 141569931 141576077 - 6147 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-208N20.1 NA 0.024 70-80% Testis 4.340143021 CRC,Normal NA NA boxplot RP11-178D12.2 NA chr15 55442635 55443357 - 723 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-178D12.2 NA 0.012 60-70% NA NA CRC NA NA boxplot RP11-408O19.5 NA chr9 112885158 112885767 + 610 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-408O19.5 NA 0.024 70-80% NA NA CRC NA NA boxplot RP11-2B6.2 NA chr9 94176458 94177892 + 1435 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-2B6.2 NA 0.165 0-10% NA NA CRC,HCC,Normal,PAAD PAAD(up) NA boxplot SUPT16HP1 SPT16 homolog, facilitates chromatin remodeling subunit pseudogene 1 chr12 16399274 16402406 - 3133 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SUPT16HP1 NA 0.835 10-20% NA NA CHD,CRC,HCC,Normal,PAAD CHD(down),CRC(down),PAAD(down) NA boxplot RP11-736K20.5 NA chr11 86892214 86925037 - 32824 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-736K20.5 NA 0.871 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(down) NA boxplot RP11-613F22.8 NA chr11 18507608 18508820 - 1213 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-613F22.8 NA 0.024 70-80% NA NA CRC NA NA boxplot RP11-49K24.5 NA chr18 47137018 47137290 + 273 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-49K24.5 NA 0.012 20-30% NA NA HCC NA NA boxplot TRIM31-AS1 TRIM31 antisense RNA 1 chr6 30105240 30114724 + 9485 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TRIM31-AS1 NA 0.118 20-30% NA NA CHD,HCC,Normal,PAAD NA NA boxplot RP11-238K6.1 NA chr8 137809444 138083570 - 274127 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-238K6.1 NA 0.012 80-90% NA NA Breast_cancer,HCC NA NA boxplot AC002550.6 NA chr16 19694035 19694428 - 394 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC002550.6 NA 0.059 20-30% NA NA CRC,Normal NA NA boxplot RP11-333J10.2 NA chr17 36980167 36980422 + 256 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-333J10.2 NA 0.012 60-70% Fallopian Tube 4.906892038 CRC,Normal NA NA boxplot CTD-2525I3.6 NA chr19 52300693 52345229 - 44537 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2525I3.6 NA 0.024 90-100% Testis 1.948634428 Normal NA NA boxplot RP11-34P13.7 NA chr1 89295 133723 - 44429 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-34P13.7 NA 0.424 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CTC-523E23.10 NA chr19 34779412 34780021 - 610 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-523E23.10 NA 0.012 70-80% NA NA Breast_cancer,Normal NA NA boxplot RP11-728F11.4 NA chr11 117833719 117838942 + 5224 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-728F11.4 NA 0.588 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-206M11.7 NA chr3 149284782 149333653 + 48872 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-206M11.7 NA 0.012 10-20% NA NA Normal NA NA boxplot CTC-591M7.1 NA chr16 22806289 22813680 - 7392 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-591M7.1 NA 0.082 10-20% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-349F21.5 NA chr8 17500012 17500605 + 594 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-349F21.5 NA 0.012 30-40% NA NA NA NA NA boxplot CTB-164L20.1 NA chr5 138620329 138620964 + 636 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTB-164L20.1 NA 0.012 20-30% Testis 4.906892038 Breast_cancer,CRC NA NA boxplot RP11-641C17.2 NA chr3 60690225 60690719 - 495 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-641C17.2 exo_circ_029200,exo_circ_021849,exo_circ_049142,exo_circ_043916,exo_circ_016055,exo_circ_054353 0.024 10-20% NA NA Normal NA NA boxplot RP11-650L12.4 NA chr15 78537681 78538946 + 1266 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-650L12.4 NA 0.024 20-30% NA NA HCC NA NA boxplot NKAPP1 NFKB activating protein pseudogene 1 chrX 120120953 120245267 - 124315 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NKAPP1 NA 0.741 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down),CRC(up) NA boxplot RP11-114B7.6 NA chr1 32717734 32725237 - 7504 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-114B7.6 NA 0.024 80-90% Adrenal Gland 3.841016885 Breast_cancer,Normal NA NA boxplot RP1-27K12.4 NA chr6 53503185 53506919 + 3735 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-27K12.4 NA 0.129 20-30% Testis 1.086670764 CRC,HCC,Normal,PAAD NA NA boxplot ENO1P1 enolase 1, (alpha) pseudogene 1 chr1 236483165 236484468 + 1304 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ENO1P1 NA 0.529 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot GAPDHP22 glyceraldehyde 3 phosphate dehydrogenase pseudogene 22 chr13 99190579 99190991 - 413 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GAPDHP22 exo_circ_040012 0.047 60-70% Testis 2.719520739 CRC,Normal NA NA boxplot CTA-250D13.1 NA chr7 114560961 114561517 + 557 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTA-250D13.1 NA 0.012 70-80% NA NA NA NA NA boxplot RP11-748H22.1 NA chr11 101584295 101595156 + 10862 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-748H22.1 NA 0.294 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-111M22.5 NA chr11 76392196 76392905 + 710 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-111M22.5 NA 0.012 40-50% NA NA NA NA NA boxplot RP11-666E17.1 NA chr14 81741002 82030349 + 289348 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-666E17.1 NA 0.047 70-80% Testis 4.906892038 Normal,PAAD NA NA boxplot RP11-436D23.1 NA chr6 97283303 98399872 + 1116570 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-436D23.1 NA 0.071 80-90% Brain 3.9975864 Breast_cancer,CRC,HCC,Normal NA NA boxplot RP11-139E19.3 NA chr12 45256473 45256726 + 254 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-139E19.3 exo_circ_051050,exo_circ_047742 0.047 30-40% NA NA Normal,PAAD NA NA boxplot RP11-368J22.2 NA chr15 93065586 93066606 - 1021 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-368J22.2 NA 0.012 90-100% NA NA Breast_cancer NA NA boxplot RP11-39H3.2 NA chr5 180078357 180081691 - 3335 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-39H3.2 exo_circ_031757 0.341 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-536I6.2 NA chr3 14272373 14303845 - 31473 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-536I6.2 NA 0.012 90-100% NA NA Breast_cancer,HCC NA NA boxplot RP11-63M22.2 NA chr16 66720897 66731785 + 10889 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-63M22.2 NA 0.259 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot RP11-667F14.1 NA chr7 116209234 116211511 - 2278 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-667F14.1 NA 0.576 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot AC017079.3 NA chr2 128203361 128203775 + 415 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC017079.3 NA 0.024 70-80% Muscle 4.906892038 CRC,Normal,PAAD NA NA boxplot ZFAS1 ZNFX1 antisense RNA 1 chr20 49278178 49295738 + 17561 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ZFAS1 exo_circ_058049 1 0-10% NA NA CHD,CRC,HCC,Normal,PAAD CRC(down) NA boxplot HSPB1P2 heat shock protein family B (small) member 1 pseudogene 2 chrX 49233956 49234501 - 546 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HSPB1P2 NA 0.024 30-40% NA NA Breast_cancer,Normal,PAAD NA NA boxplot IL9RP3 interleukin 9 receptor pseudogene 3 chr16 29336 38321 - 8986 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=IL9RP3 NA 0.4 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-95O2.1 NA chr18 37234119 37236242 - 2124 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-95O2.1 NA 0.012 90-100% NA NA Breast_cancer NA NA boxplot ARMCX5-GPRASP2 ARMCX5-GPRASP2 readthrough chrX 102599512 102714671 + 115160 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ARMCX5-GPRASP2 NA 0.988 0-10% NA NA CHD,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP5-981O7.2 NA chr7 152120001 152121717 - 1717 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-981O7.2 NA 0.271 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot AP001372.2 NA chr11 74493366 74498533 + 5168 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AP001372.2 NA 0.788 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down) NA boxplot RP11-29P20.1 NA chr13 87607907 87609234 - 1328 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-29P20.1 NA 0.012 70-80% NA NA NA NA NA boxplot ACTBP11 actin, beta pseudogene 11 chr1 223863726 223864851 - 1126 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ACTBP11 NA 0.976 40-50% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot CTD-2587H24.10 NA chr19 55216660 55221616 + 4957 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2587H24.10 NA 0.024 60-70% NA NA Breast_cancer,Normal NA NA boxplot RP3-380B8.4 NA chr6 5851506 5870220 + 18715 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-380B8.4 exo_circ_055230,exo_circ_049843 0.094 70-80% NA NA CRC,HCC,Normal NA NA boxplot RP11-103C16.2 NA chr6 128027886 128085248 + 57363 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-103C16.2 NA 0.129 70-80% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-254B13.4 NA chr12 68626870 68627187 - 318 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-254B13.4 NA 0.024 70-80% NA NA Normal NA NA boxplot RP1-138B7.5 NA chr20 43549389 43550949 - 1561 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-138B7.5 NA 0.024 30-40% NA NA HCC,PAAD NA NA boxplot RPS28P7 ribosomal protein S28 pseudogene 7 chr11 82689559 82689768 + 210 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPS28P7 NA 1 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot AC007899.3 NA chr2 37148530 37149304 + 775 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC007899.3 NA 0.376 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-75A9.3 NA chrX 46454097 46457199 - 3103 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-75A9.3 NA 0.035 20-30% NA NA HCC,PAAD NA NA boxplot RP3-467L1.4 NA chr1 7810242 7827342 - 17101 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-467L1.4 NA 0.306 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot AC105053.3 NA chr2 85815130 85825391 + 10262 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC105053.3 NA 0.012 90-100% NA NA CRC NA NA boxplot AP000282.2 NA chr21 32913649 33071104 - 157456 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AP000282.2 NA 0.082 70-80% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-96C23.15 NA chr10 86970237 86970826 - 590 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-96C23.15 NA 0.2 80-90% NA NA CRC,Normal,PAAD NA NA boxplot LINC01468 long intergenic non-protein coding RNA 1468 chr10 52450874 52470533 - 19660 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01468 NA 0.447 10-20% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-2C15.1 NA chr16 75838630 75860867 - 22238 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-2C15.1 NA 0.012 30-40% Testis 4.906892038 HCC NA NA boxplot RP11-120M18.2 NA chr17 68413623 68524949 + 111327 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-120M18.2 NA 0.929 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-5P18.5 NA chr1 16006160 16006671 - 512 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-5P18.5 NA 0.012 50-60% NA NA Normal NA NA boxplot AC005363.11 NA chr16 1971655 1971896 - 242 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC005363.11 NA 0.047 60-70% NA NA CRC,Normal NA NA boxplot RP11-661C8.2 NA chr5 946315 956520 + 10206 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-661C8.2 NA 0.012 60-70% Testis 3.558276318 NA NA NA boxplot RPS2P5 ribosomal protein S2 pseudogene 5 chr12 118246084 118246962 + 879 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPS2P5 NA 1 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-74C1.2 NA chr1 151557446 151557940 + 495 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-74C1.2 NA 0.024 40-50% NA NA Breast_cancer,PAAD NA NA boxplot RP11-680H20.2 NA chr11 94238150 94279206 + 41057 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-680H20.2 NA 0.094 60-70% Testis 2.732423123 CRC,HCC,Normal,PAAD NA NA boxplot CTD-2515H24.2 NA chr15 57553955 57555680 + 1726 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2515H24.2 NA 0.059 30-40% NA NA Breast_cancer,CRC,Normal,PAAD NA NA boxplot ARL4AP2 ADP ribosylation factor like GTPase 4A pseudogene 2 chr4 40786110 40786710 + 601 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ARL4AP2 NA 0.141 90-100% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP5-1039K5.13 NA chr22 38057180 38073940 - 16761 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-1039K5.13 NA 0.012 70-80% Prostate 4.584231493 Normal NA NA boxplot RP11-328C8.2 NA chr12 42431665 42433357 - 1693 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-328C8.2 NA 0.035 70-80% NA NA HCC,Normal NA NA boxplot RP11-212D3.4 NA chrX 75903105 75904858 + 1754 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-212D3.4 NA 0.012 10-20% NA NA HCC NA NA boxplot GOT2P1 glutamic-oxaloacetic transaminase 2 pseudogene 1 chr1 55367466 55368774 + 1309 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GOT2P1 NA 0.071 90-100% NA NA HCC,Normal NA NA boxplot AC079807.3 NA chr2 47883455 47883909 + 455 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC079807.3 NA 0.012 90-100% Ovary 4.266899159 Normal NA NA boxplot RP11-321E2.3 NA chr5 17404019 17441694 + 37676 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-321E2.3 NA 0.047 80-90% Brain 4.061224182 Breast_cancer,HCC,Normal,PAAD NA NA boxplot GHRLOS ghrelin opposite strand/antisense RNA chr3 10287413 10287482 + 70 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GHRLOS NA 0.612 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up) NA boxplot AC010761.14 NA chr17 28727258 28727739 + 482 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC010761.14 NA 0.012 90-100% Testis 3.951268042 Normal NA NA boxplot AC023115.2 NA chr2 67086446 67311439 + 224994 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC023115.2 NA 0.012 0-10% Fallopian Tube 1.400224381 Breast_cancer,PAAD NA NA boxplot IMPA1P1 NA chr8 81605569 81631134 - 25566 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=IMPA1P1 NA 0.047 70-80% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot TSSK5P testis-specific serine kinase 5, pseudogene chr8 144141214 144143664 - 2451 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TSSK5P NA 0.024 10-20% NA NA Breast_cancer,HCC,Normal NA NA boxplot RP11-323I15.2 NA chr15 35092481 35093210 + 730 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-323I15.2 NA 0.012 80-90% Testis 1.005781758 NA NA NA boxplot RP11-649E7.7 NA chr14 49629291 49629890 - 600 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-649E7.7 NA 0.012 50-60% NA NA NA NA NA boxplot RP5-890E16.4 NA chr17 48060383 48060669 - 287 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-890E16.4 NA 0.129 70-80% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CTD-2026K11.5 NA chr15 75645020 75645442 + 423 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2026K11.5 NA 0.024 60-70% NA NA HCC,Normal,PAAD NA NA boxplot CATIP-AS1 CATIP antisense RNA 1 chr2 218366665 218367835 - 1171 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CATIP-AS1 NA 0.212 40-50% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP1-102G20.5 NA chr1 174934947 174954261 - 19315 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-102G20.5 NA 0.047 20-30% Testis 4.808523213 CRC,Normal NA NA boxplot RP11-24M17.5 NA chr15 75775553 75786898 + 11346 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-24M17.5 NA 0.024 60-70% Testis 4.906892038 Breast_cancer,PAAD NA NA boxplot HMGB1P5 high mobility group box 1 pseudogene 5 chr3 22381819 22382929 + 1111 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HMGB1P5 NA 1 0-10% NA NA CHD,CRC,HCC,Normal,PAAD CRC(up),PAAD(up) NA boxplot UBE2MP1 ubiquitin conjugating enzyme E2M pseudogene 1 chr16 35169692 35170241 - 550 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=UBE2MP1 NA 0.953 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CRC(down),PAAD(down) NA boxplot AC079807.1 NA chr2 47939738 47940218 - 481 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC079807.1 NA 0.118 70-80% Testis 4.906892038 CRC,HCC,Normal,PAAD NA NA boxplot RP11-785G17.1 NA chr2 236367560 236369102 + 1543 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-785G17.1 NA 0.024 30-40% NA NA PAAD NA NA boxplot RP11-516C1.1 NA chr15 44402685 44427144 - 24460 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-516C1.1 NA 0.553 30-40% Testis 2.260564582 CRC,HCC,Normal,PAAD NA NA boxplot RP11-351J23.2 NA chr6 167666840 167679270 - 12431 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-351J23.2 NA 0.035 80-90% NA NA Breast_cancer,CRC,Normal NA NA boxplot RP11-1275H24.3 NA chr7 5428731 5429672 + 942 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1275H24.3 NA 0.118 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP1-148H17.1 NA chr20 47391929 47412327 - 20399 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-148H17.1 NA 0.659 10-20% NA NA CRC,HCC,Normal,PAAD CHD(down),PAAD(down) NA boxplot RPL12P7 ribosomal protein L12 pseudogene 7 chr14 68693090 68693583 + 494 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL12P7 exo_circ_022839 0.035 20-30% NA NA Breast_cancer,CRC,Normal NA NA boxplot BHLHB9P1 basic helix-loop-helix domain containing, class B, 9 pseudogene 1 chr14 80981988 80983638 + 1651 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=BHLHB9P1 NA 0.012 80-90% NA NA Breast_cancer,PAAD NA NA boxplot NPM1P12 nucleophosmin 1 (nucleolar phosphoprotein B23, numatrin) pseudogene 12 chr7 149334024 149334857 + 834 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NPM1P12 NA 0.012 90-100% NA NA CRC,Normal NA NA boxplot LINC00242 long intergenic non-protein coding RNA 242 chr6 169788790 169798825 - 10036 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00242 NA 0.035 20-30% NA NA Breast_cancer,HCC NA NA boxplot KRT127P keratin 127 pseudogene chr12 52751978 52753821 - 1844 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KRT127P NA 0.012 0-10% NA NA Normal NA NA boxplot RP11-635L1.2 NA chr4 168843988 168844735 + 748 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-635L1.2 NA 0.059 40-50% NA NA CRC,HCC,PAAD NA NA boxplot CTD-3035K23.3 NA chr17 62679403 62681354 - 1952 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-3035K23.3 NA 0.059 80-90% NA NA Breast_cancer,CRC,HCC,PAAD NA NA boxplot RP11-467D6.1 NA chr7 39947522 39949755 - 2234 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-467D6.1 NA 0.365 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-23F23.2 NA chr11 4187140 4202655 + 15516 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-23F23.2 NA 0.059 10-20% Testis 1.218006471 Breast_cancer,Normal,PAAD NA NA boxplot HCG18 HLA complex group 18 (non-protein coding) chr6 30287397 30327150 - 39754 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HCG18 NA 1 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot CTA-113A6.2 NA chr16 24208105 24208478 + 374 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTA-113A6.2 NA 0.094 40-50% NA NA CRC,HCC,Normal NA NA boxplot RP11-780O24.2 NA chr11 58917015 58928689 - 11675 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-780O24.2 NA 0.024 10-20% NA NA Breast_cancer,HCC,Normal NA NA boxplot AC016722.4 NA chr2 46899275 46908678 + 9404 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC016722.4 NA 0.141 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-113K21.4 NA chr11 83072402 83097196 - 24795 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-113K21.4 NA 0.247 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-48G14.2 NA chr15 56394321 56396785 - 2465 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-48G14.2 NA 0.118 20-30% NA NA Normal,PAAD NA NA boxplot CTB-180C19.1 NA chr5 167287320 167294273 - 6954 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTB-180C19.1 NA 0.012 30-40% Testis 4.906892038 Breast_cancer,HCC NA NA boxplot NRIR negative regulator of interferon response (non-protein coding) chr2 6828514 6840464 - 11951 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NRIR NA 0.4 20-30% NA NA CRC,HCC,Normal,PAAD NA Yes boxplot RP1-60N8.1 NA chrX 17528435 17587160 + 58726 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-60N8.1 NA 0.118 40-50% NA NA CRC,Normal,PAAD NA NA boxplot RPL5P34 ribosomal protein L5 pseudogene 34 chr22 42776406 42777296 - 891 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL5P34 NA 1 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP1-102H19.7 NA chr6 87356831 87358605 + 1775 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-102H19.7 NA 0.082 10-20% NA NA Breast_cancer,CRC,Normal,PAAD NA NA boxplot HOXC-AS3 HOXC cluster antisense RNA 3 chr12 53981509 53985519 - 4011 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HOXC-AS3 NA 0.035 50-60% NA NA Breast_cancer,HCC,PAAD NA NA boxplot RP5-1120P11.4 NA chr6 44089242 44089696 - 455 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-1120P11.4 NA 0.012 40-50% Testis 4.906892038 CRC NA NA boxplot AC017104.4 NA chr2 231437101 231437421 - 321 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC017104.4 NA 0.024 50-60% Testis 4.906892038 Breast_cancer,CRC NA NA boxplot OLA1P2 Obg-like ATPase 1 pseudogene 2 chr17 20775642 20776905 + 1264 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=OLA1P2 NA 0.106 20-30% Testis 4.165323469 CRC,HCC,Normal,PAAD NA NA boxplot AF277315.13 NA chrX 154654546 154655325 + 780 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AF277315.13 NA 0.035 40-50% Testis 4.906892038 Breast_cancer,CRC,HCC NA NA boxplot LINC00618 long intergenic non-protein coding RNA 618 chr14 96943579 96945394 + 1816 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00618 NA 0.188 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP6-114E22.1 NA chr14 71848606 71908430 + 59825 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP6-114E22.1 NA 0.024 20-30% Testis 4.906892038 PAAD NA NA boxplot CTC-458I2.2 NA chr5 80128361 80143883 + 15523 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-458I2.2 NA 0.094 80-90% NA NA CRC,HCC,Normal NA NA boxplot RP11-616K22.1 NA chr15 44354691 44355692 + 1002 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-616K22.1 NA 0.165 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot C1QTNF1-AS1 C1QTNF1 antisense RNA 1 chr17 79019209 79027655 - 8447 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=C1QTNF1-AS1 NA 0.235 20-30% Adrenal Gland 2.785344445 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-341D18.5 NA chr13 18279320 18309934 - 30615 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-341D18.5 NA 0.012 90-100% NA NA Breast_cancer NA NA boxplot RP11-678G14.3 NA chr19 21570822 21587322 - 16501 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-678G14.3 NA 0.918 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot LA16c-60H5.7 NA chr22 15854195 15855243 - 1049 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LA16c-60H5.7 NA 0.035 50-60% Testis 1.028662879 Breast_cancer,HCC,PAAD NA NA boxplot AC023274.4 NA chrY 24142358 24157843 + 15486 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC023274.4 NA 0.188 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-583F2.1 NA chr17 64927634 64934203 + 6570 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-583F2.1 NA 0.082 70-80% Testis 1.640067138 CRC,HCC,Normal NA NA boxplot PLCE1-AS1 PLCE1 antisense RNA 1 chr10 94279277 94287478 - 8202 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PLCE1-AS1 NA 0.012 80-90% NA NA PAAD NA NA boxplot RP11-74E22.6 NA chr17 2688473 2688960 + 488 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-74E22.6 NA 0.059 70-80% NA NA Breast_cancer,CRC,Normal NA NA boxplot LINC01269 long intergenic non-protein coding RNA 1269 chr14 70698698 70712153 + 13456 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01269 NA 0.235 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot AC133965.1 NA chr2 87654890 87655243 + 354 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC133965.1 NA 0.059 50-60% NA NA CRC,Normal,PAAD NA NA boxplot AC093609.1 NA chr2 43097746 43102691 - 4946 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC093609.1 NA 0.271 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC002463.3 NA chr7 112622378 112708080 + 85703 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC002463.3 NA 0.024 70-80% Testis 4.906892038 Breast_cancer,Normal NA NA boxplot ZNF887P zinc finger protein 887, pseudogene chr19 11648364 11652877 + 4514 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ZNF887P NA 0.247 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-318C24.2 NA chr1 175904762 175920513 - 15752 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-318C24.2 NA 0.141 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-864J10.4 NA chr12 107736555 107759968 + 23414 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-864J10.4 NA 0.365 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot IL21R-AS1 IL21R antisense RNA 1 chr16 27447669 27453393 - 5725 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=IL21R-AS1 NA 0.118 30-40% NA NA Breast_cancer,CRC,Normal,PAAD NA NA boxplot UBE2CP2 ubiquitin conjugating enzyme E2C pseudogene 2 chr18 22900486 22900995 - 510 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=UBE2CP2 NA 0.047 40-50% NA NA CRC,Normal NA NA boxplot RP11-981P6.1 NA chr12 89561129 89594878 + 33750 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-981P6.1 NA 0.141 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-274J7.2 NA chr12 63878787 63879474 + 688 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-274J7.2 NA 0.012 0-10% NA NA Breast_cancer NA NA boxplot HNRNPA1P5 heterogeneous nuclear ribonucleoprotein A1 pseudogene 5 chr15 67627852 67629135 + 1284 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HNRNPA1P5 NA 0.082 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP1-317E23.3 NA chr1 25816749 25820797 - 4049 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-317E23.3 NA 0.506 50-60% Testis 4.137328604 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-115N12.1 NA chr18 42089312 42089752 + 441 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-115N12.1 NA 0.035 60-70% NA NA CRC,HCC NA NA boxplot CTA-392E5.1 NA chr8 85839705 85951083 + 111379 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTA-392E5.1 NA 0.306 10-20% Brain 4.906892038 CRC,HCC,Normal,PAAD NA NA boxplot RP1-265C24.8 NA chr6 28136849 28139678 + 2830 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-265C24.8 NA 0.035 70-80% NA NA CRC NA NA boxplot AC005041.11 NA chr2 74407797 74413603 - 5807 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC005041.11 NA 0.047 60-70% Testis 3.255027745 Breast_cancer,CRC,Normal NA NA boxplot CTD-2526A2.4 NA chr17 80463451 80465593 - 2143 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2526A2.4 NA 0.012 70-80% NA NA Breast_cancer,PAAD NA NA boxplot RP11-620J15.2 NA chr12 57869835 57896482 - 26648 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-620J15.2 NA 0.047 50-60% NA NA Breast_cancer,CRC,HCC NA NA boxplot RP11-108K3.1 NA chr15 51037488 51293912 + 256425 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-108K3.1 NA 0.024 20-30% Testis 4.175062642 Breast_cancer,HCC NA NA boxplot RP11-732M18.4 NA chr6 158282841 158428379 + 145539 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-732M18.4 exo_circ_055159 0.035 70-80% NA NA Breast_cancer,CRC,Normal NA NA boxplot HSPA8P14 heat shock protein family A (Hsp70) member 8 pseudogene 14 chr12 111381867 111385638 + 3772 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HSPA8P14 NA 0.082 40-50% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot RP11-197N18.8 NA chr12 123087256 123092821 - 5566 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-197N18.8 NA 0.153 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CSF2RBP1 colony stimulating factor 2 receptor, beta, low-affinity (granulocyte-macrophage) pseudogene 1 chr22 36950529 36953723 - 3195 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CSF2RBP1 NA 0.059 60-70% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot RP11-87M18.2 NA chrX 36365626 36440292 - 74667 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-87M18.2 NA 0.012 60-70% NA NA HCC NA NA boxplot SNHG1 small nucleolar RNA host gene 1 chr11 62851988 62855914 - 3927 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SNHG1 NA 0.976 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down),PAAD(up) NA boxplot RP11-25K21.1 NA chr1 161671978 161674824 - 2847 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-25K21.1 NA 0.094 60-70% Spleen 1.239704699 Breast_cancer,CRC,HCC,PAAD NA NA boxplot OR7E36P olfactory receptor family 7 subfamily E member 36 pseudogene chr13 41431248 41432201 - 954 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=OR7E36P NA 0.388 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-51F16.9 NA chr17 63610772 63611184 - 413 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-51F16.9 NA 0.012 40-50% NA NA Breast_cancer,Normal NA NA boxplot RP11-190C22.1 NA chr3 119635526 119636150 - 625 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-190C22.1 NA 0.012 90-100% NA NA Normal NA NA boxplot TMEM185AP1 transmembrane protein 185A pseudogene 1 chrX 149768897 149771368 + 2472 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TMEM185AP1 NA 0.624 20-30% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-155O18.6 NA chr1 52353487 52353877 + 391 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-155O18.6 NA 0.047 50-60% NA NA Breast_cancer,CRC,PAAD NA NA boxplot RPL35P2 ribosomal protein L35 pseudogene 2 chr6 34263311 34263673 - 363 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL35P2 NA 0.165 90-100% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-50E11.2 NA chr10 50629532 50631075 - 1544 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-50E11.2 NA 0.176 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP5-984P4.6 NA chr20 21499261 21502934 - 3674 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-984P4.6 NA 0.024 0-10% NA NA Breast_cancer,PAAD NA NA boxplot RP11-867G2.4 NA chr11 94559018 94559374 + 357 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-867G2.4 NA 0.047 50-60% NA NA CRC,HCC NA NA boxplot RP11-225N10.1 NA chr3 182783236 182793394 - 10159 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-225N10.1 NA 0.012 90-100% Testis 3.907595982 CRC NA NA boxplot RP11-63P12.7 NA chr9 72257336 72257783 + 448 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-63P12.7 NA 0.024 0-10% Small Intestine 3.80526461 PAAD NA NA boxplot SERHL serine hydrolase-like (pseudogene) chr22 42500579 42512560 + 11982 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SERHL NA 0.447 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-494M8.4 NA chr11 7754393 7905955 - 151563 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-494M8.4 NA 0.012 80-90% NA NA Breast_cancer NA NA boxplot RP11-25O10.2 NA chr1 52554818 52555273 + 456 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-25O10.2 NA 0.012 30-40% Testis 4.374262376 Breast_cancer,PAAD NA NA boxplot RPL3P2 ribosomal protein L3 pseudogene 2 chr6 31280317 31281519 + 1203 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL3P2 NA 0.988 20-30% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD PAAD(down) NA boxplot BTBD6P1 BTB (POZ) domain containing 6 pseudogene 1 chr1 23901471 23902737 - 1267 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=BTBD6P1 NA 0.529 20-30% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot SDHAP3 succinate dehydrogenase complex subunit A, flavoprotein pseudogene 3 chr5 1572222 1594620 - 22399 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SDHAP3 NA 0.647 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD PAAD(up) NA boxplot PGAM1P10 phosphoglycerate mutase 1 pseudogene 10 chr6 73055097 73055857 + 761 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PGAM1P10 NA 0.024 90-100% NA NA Breast_cancer,CRC NA NA boxplot RP11-627K11.1 NA chr12 31251992 31252597 - 606 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-627K11.1 NA 0.671 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP3-393E18.3 NA chr6 159555964 159556174 + 211 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-393E18.3 NA 0.012 50-60% NA NA HCC NA NA boxplot RP11-170M17.2 NA chr10 63902451 63903245 - 795 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-170M17.2 NA 0.906 20-30% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(down) NA boxplot RP4-799P18.4 NA chr1 234261706 234274465 + 12760 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-799P18.4 NA 0.024 30-40% Testis 4.790058976 Normal,PAAD NA NA boxplot STX17-AS1 STX17 antisense RNA 1 chr9 99886322 99906601 - 20280 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=STX17-AS1 exo_circ_045024 0.353 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot AC145110.1 NA chr8 29748309 29798492 + 50184 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC145110.1 NA 0.224 30-40% Spleen 2.609305795 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RPL23AP20 ribosomal protein L23a pseudogene 20 chr1 241916123 241916543 + 421 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL23AP20 NA 0.024 10-20% NA NA PAAD NA NA boxplot RP11-310H4.6 NA chr7 55656768 55678490 - 21723 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-310H4.6 exo_circ_044641 0.012 90-100% Testis 4.111972943 PAAD NA NA boxplot RP11-390F4.2 NA chr9 6675284 6675614 + 331 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-390F4.2 NA 0.012 70-80% Liver 2.70382673 NA NA NA boxplot AC011933.2 NA chr17 75338827 75339147 + 321 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC011933.2 NA 0.035 90-100% Ovary 3.502046153 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot XBP1P1 X-box binding protein 1 pseudogene 1 chr5 112885094 112885745 + 652 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=XBP1P1 NA 0.059 40-50% NA NA Breast_cancer,CRC,Normal,PAAD NA NA boxplot C1orf147 chromosome 1 open reading frame 147 chr1 206491116 206497728 - 6613 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=C1orf147 NA 0.024 70-80% NA NA Breast_cancer,CRC,Normal NA NA boxplot RP11-92G12.3 NA chr1 200669507 200694250 + 24744 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-92G12.3 NA 0.047 70-80% NA NA HCC,Normal,PAAD NA NA boxplot AP006621.5 NA chr11 777578 784297 + 6720 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AP006621.5 NA 0.482 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot TOB1-AS1 TOB1 antisense RNA 1 chr17 50866679 50909737 + 43059 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TOB1-AS1 NA 0.259 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-141C7.5 NA chr3 195635188 195636301 + 1114 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-141C7.5 NA 0.094 70-80% NA NA CRC,HCC,Normal,PAAD NA NA boxplot PCGF7P polycomb group ring finger 7 pseudogene chr19 22137931 22138981 + 1051 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PCGF7P NA 0.294 70-80% Testis 4.906892038 Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot XXyac-YM21GA2.7 NA chr9 87857015 87859399 - 2385 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=XXyac-YM21GA2.7 NA 0.118 20-30% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot BX842568.4 NA chrX 36985523 36986093 - 571 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=BX842568.4 NA 0.047 40-50% Pituitary 2.609173101 HCC,Normal NA NA boxplot RP11-385F5.5 NA chr1 236536162 236536704 - 543 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-385F5.5 NA 0.282 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot LINC01105 long intergenic non-protein coding RNA 1105 chr2 5932687 6001275 + 68589 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01105 NA 0.035 10-20% NA NA Breast_cancer,Normal,PAAD NA NA boxplot CTB-111H14.1 NA chr7 106372251 106770207 - 397957 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTB-111H14.1 exo_circ_031089,exo_circ_042379,exo_circ_055315 0.518 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down),HCC(down) NA boxplot RP11-383I23.2 NA chr3 99802699 99806058 - 3360 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-383I23.2 NA 0.012 30-40% NA NA Breast_cancer NA NA boxplot RPS6P8 ribosomal protein S6 pseudogene 8 chr6 73391038 73391767 - 730 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPS6P8 NA 0.012 70-80% Testis 3.942341589 NA NA NA boxplot AC022816.2 NA chr17 14374139 14421026 + 46888 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC022816.2 NA 0.012 70-80% Liver 4.906892038 Breast_cancer,HCC NA NA boxplot RP11-77B22.2 NA chr8 15973315 16000324 + 27010 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-77B22.2 NA 0.012 50-60% NA NA PAAD NA NA boxplot RP11-395B7.2 NA chr7 100963828 100968124 - 4297 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-395B7.2 NA 0.024 90-100% Prostate 3.66664096 Breast_cancer,HCC,PAAD NA NA boxplot OR5G3 olfactory receptor family 5 subfamily G member 3 (gene/pseudogene) chr11 56819576 56820504 - 929 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=OR5G3 NA 0.024 70-80% Spleen 4.882043648 HCC NA NA boxplot RP11-409C19.2 NA chr8 66984135 66986187 - 2053 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-409C19.2 NA 0.024 90-100% NA NA Breast_cancer,Normal NA NA boxplot OR6L2P olfactory receptor family 6 subfamily L member 2 pseudogene chr10 133430394 133431318 - 925 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=OR6L2P NA 0.012 80-90% NA NA CRC NA NA boxplot RFWD2P1 ring finger and WD repeat domain 2, E3 ubiquitin protein ligase pseudogene 1 chr18 8412129 8414304 + 2176 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RFWD2P1 NA 0.012 30-40% NA NA Breast_cancer,Normal NA NA boxplot MLLT4-AS1 MLLT4 antisense RNA 1 (head to head) chr6 167823876 167826709 - 2834 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MLLT4-AS1 NA 0.129 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot GPX1P1 glutathione peroxidase pseudogene 1 chrX 13378735 13379340 - 606 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GPX1P1 NA 1 0-10% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-804A23.1 NA chr11 60813932 60821739 - 7808 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-804A23.1 NA 0.012 70-80% Testis 4.906892038 Breast_cancer,PAAD NA NA boxplot MIR4300HG MIR4300 host gene chr11 81879851 82718082 - 838232 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MIR4300HG NA 0.012 90-100% NA NA CRC NA NA boxplot RPL36AP43 ribosomal protein L36a pseudogene 43 chr15 89687937 89688243 - 307 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL36AP43 NA 0.012 30-40% NA NA NA NA NA boxplot RP11-165J3.6 NA chr9 93435332 93437121 - 1790 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-165J3.6 NA 0.482 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-192H23.6 NA chr17 28607963 28609730 + 1768 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-192H23.6 NA 0.024 70-80% NA NA CRC,HCC NA NA boxplot RP11-92C4.3 NA chr9 98847172 98872415 - 25244 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-92C4.3 NA 0.071 60-70% Testis 3.40272394 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot YWHAZP3 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta pseudogene 3 chr10 23136924 23137661 + 738 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=YWHAZP3 NA 1 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP1-159A19.4 NA chr1 27525805 27530561 + 4757 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-159A19.4 NA 0.294 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-30P21.2 NA chr4 62291562 62292337 + 776 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-30P21.2 NA 0.012 50-60% Heart 4.906892038 PAAD NA NA boxplot RP11-190P13.2 NA chr3 115251196 115285347 + 34152 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-190P13.2 exo_circ_026304 0.306 30-40% Testis 2.638829934 CRC,HCC,Normal,PAAD NA NA boxplot RP11-432J22.2 NA chr9 135907812 135913513 + 5702 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-432J22.2 NA 0.294 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-767C1.1 NA chr3 12877522 12885211 - 7690 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-767C1.1 NA 0.012 10-20% Testis 4.514498233 Normal NA NA boxplot RP11-540O11.8 NA chr15 41016990 41018843 - 1854 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-540O11.8 NA 0.082 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot LOXL1-AS1 LOXL1 antisense RNA 1 chr15 73908071 73928248 - 20178 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LOXL1-AS1 NA 0.729 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD PAAD(up) NA boxplot ABHD17AP4 abhydrolase domain containing 17A pseudogene P4 chr22 20667836 20670984 - 3149 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ABHD17AP4 NA 0.871 20-30% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up),CRC(up) NA boxplot RP11-706P11.2 NA chr18 57588611 57589091 - 481 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-706P11.2 NA 0.035 0-10% NA NA Normal NA NA boxplot CTD-2540B15.11 NA chr19 33299934 33301168 + 1235 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2540B15.11 NA 0.494 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-523L20.2 NA chr16 47724568 47908431 + 183864 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-523L20.2 NA 0.012 60-70% NA NA Breast_cancer,CRC,Normal NA NA boxplot RPL31P7 ribosomal protein L31 pseudogene 7 chr17 80602549 80602926 - 378 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL31P7 NA 0.012 90-100% NA NA NA NA NA boxplot RP11-457I16.2 NA chr16 18570448 18571683 - 1236 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-457I16.2 NA 0.012 90-100% NA NA Breast_cancer,PAAD NA NA boxplot HNRNPA1P61 heterogeneous nuclear ribonucleoprotein A1 pseudogene 61 chr2 33636502 33637425 + 924 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HNRNPA1P61 NA 0.024 90-100% Testis 3.235143274 CRC NA NA boxplot RP1-221C16.8 NA chr6 26160765 26172802 - 12038 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-221C16.8 NA 0.329 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot LOH12CR2 loss of heterozygosity, 12, chromosomal region 2 (non-protein coding) chr12 12355406 12357067 - 1662 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LOH12CR2 NA 0.353 30-40% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-240G22.5 NA chr12 116948738 116951422 - 2685 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-240G22.5 NA 0.024 80-90% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot RP11-676M6.1 NA chr11 127940913 127941654 - 742 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-676M6.1 NA 0.929 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down) NA boxplot STARD4-AS1 STARD4 antisense RNA 1 chr5 111512226 111739726 + 227501 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=STARD4-AS1 exo_circ_054731 0.353 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC005253.2 NA chr19 18557775 18561560 - 3786 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC005253.2 NA 0.082 60-70% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot RP11-598P20.3 NA chr8 43125995 43126397 - 403 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-598P20.3 NA 0.071 40-50% NA NA Breast_cancer,HCC,Normal NA NA boxplot ST7-OT4 ST7 overlapping transcript 4 chr7 116953899 117098806 + 144908 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ST7-OT4 exo_circ_055332 0.459 30-40% Testis 3.031839939 CRC,HCC,Normal,PAAD NA NA boxplot RP3-454B23.1 NA chr12 6155035 6160719 - 5685 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-454B23.1 NA 0.118 20-30% NA NA Breast_cancer,HCC,Normal NA NA boxplot RP11-268P4.4 NA chr12 22609228 22625015 - 15788 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-268P4.4 NA 0.024 60-70% Testis 4.763428954 HCC NA NA boxplot TCP1P1 t-complex 1 pseudogene 1 chr7 42794906 42802494 + 7589 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TCP1P1 NA 0.082 90-100% NA NA CHD,HCC,Normal,PAAD NA NA boxplot BCRP2 breakpoint cluster region pseudogene 2 chr22 21103016 21122285 + 19270 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=BCRP2 NA 0.141 70-80% Testis 1.293820664 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CTC-340D7.1 NA chr5 68832585 68962158 - 129574 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-340D7.1 NA 0.012 80-90% NA NA Normal NA NA boxplot XXbac-BPG154L12.4 NA chr6 32255711 32265838 + 10128 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=XXbac-BPG154L12.4 NA 0.247 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-436H11.5 NA chr5 124734618 124735175 - 558 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-436H11.5 NA 0.024 40-50% NA NA PAAD NA NA boxplot RP11-108M9.3 NA chr1 16870945 16874092 + 3148 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-108M9.3 NA 0.094 40-50% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot RP11-534L20.4 NA chr1 206528915 206529706 + 792 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-534L20.4 NA 0.035 70-80% NA NA Breast_cancer,Normal,PAAD NA NA boxplot RP11-687F6.4 NA chr18 46852632 46853882 - 1251 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-687F6.4 NA 0.106 80-90% Testis 3.824677724 Breast_cancer,CRC,HCC,Normal NA NA boxplot RP11-338L22.2 NA chr17 29863402 29866092 + 2691 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-338L22.2 NA 0.024 20-30% NA NA CRC NA NA boxplot RPSAP54 ribosomal protein SA pseudogene 54 chr13 20961310 20962195 + 886 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPSAP54 NA 1 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up),CRC(up),HCC(up),PAAD(up) NA boxplot CTD-2647L4.5 NA chr8 29067279 29068454 + 1176 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2647L4.5 NA 0.118 40-50% NA NA HCC,Normal NA NA boxplot RP13-297E16.4 NA chrY 1732584 1755985 + 23402 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP13-297E16.4 NA 0.259 30-40% Spleen 1.596501794 CRC,HCC,Normal,PAAD NA NA boxplot RP4-659I19.1 NA chr1 232917235 232918018 + 784 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-659I19.1 NA 0.012 50-60% NA NA Breast_cancer,Normal,PAAD NA NA boxplot ASNSP6 asparagine synthetase (glutamine-hydrolyzing) pseudogene 6 chr18 11745626 11747581 + 1956 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ASNSP6 NA 0.024 40-50% NA NA Breast_cancer,PAAD NA NA boxplot RP11-471G13.5 NA chrX 95720243 95721144 + 902 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-471G13.5 NA 0.012 90-100% NA NA NA NA NA boxplot RP11-295P9.3 NA chr10 13631143 13668445 + 37303 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-295P9.3 NA 0.776 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),HCC(down),PAAD(up) NA boxplot PSMD10P1 proteasome 26S subunit, non-ATPase, 10 pseudogene 1 chr20 50913731 50914411 + 681 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PSMD10P1 NA 0.012 80-90% NA NA Breast_cancer,HCC NA NA boxplot RP11-1026M7.2 NA chr5 177782197 177794396 + 12200 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1026M7.2 NA 0.012 90-100% Brain 1.93589136 Breast_cancer,CRC NA NA boxplot RP4-710M3.2 NA chr11 30425552 30429268 + 3717 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-710M3.2 NA 0.012 90-100% NA NA Breast_cancer,Normal NA NA boxplot RP11-116O11.2 NA chr5 24578294 24578561 - 268 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-116O11.2 NA 0.012 90-100% Brain 4.906892038 PAAD NA NA boxplot RP11-770J1.5 NA chr11 118397095 118401895 - 4801 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-770J1.5 NA 0.765 10-20% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down) NA boxplot RP11-358L22.3 NA chr16 78123243 78124332 + 1090 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-358L22.3 NA 0.188 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP1-92O14.6 NA chr1 43385113 43389155 + 4043 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-92O14.6 NA 0.235 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP4-733B9.1 NA chr7 7177952 7178324 + 373 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-733B9.1 NA 0.012 80-90% Spleen 2.097579897 Normal NA NA boxplot ANP32BP3 acidic nuclear phosphoprotein 32 family member B pseudogene 3 chr15 81117635 81118340 - 706 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ANP32BP3 NA 0.012 60-70% Testis 4.906892038 HCC NA NA boxplot RP11-470M17.2 NA chr8 40161458 40172612 + 11155 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-470M17.2 NA 0.024 10-20% Testis 3.09789675 HCC,Normal NA NA boxplot RP5-902P8.10 NA chr1 1275223 1280420 + 5198 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-902P8.10 NA 0.047 80-90% NA NA Breast_cancer,CRC,Normal NA NA boxplot FTH1P23 ferritin, heavy polypeptide 1 pseudogene 23 chr3 72929044 72929593 + 550 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FTH1P23 NA 1 10-20% NA NA CHD,CRC,HCC,Normal,PAAD CHD(up),CRC(up),PAAD(up) NA boxplot RP11-104H15.7 NA chr17 7420103 7444081 + 23979 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-104H15.7 NA 0.318 70-80% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-126O22.5 NA chrX 9407861 9408638 + 778 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-126O22.5 NA 0.012 90-100% NA NA HCC NA NA boxplot SP3P Sp3 transcription factor pseudogene chr13 89361160 89363224 - 2065 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SP3P NA 0.047 30-40% Testis 4.058239549 HCC,PAAD NA NA boxplot RP11-446J8.1 NA chr4 16400430 16512187 + 111758 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-446J8.1 NA 0.2 40-50% Testis 3.918244593 CRC,HCC,Normal,PAAD NA NA boxplot AC002306.1 NA chr19 19606350 19608660 + 2311 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC002306.1 NA 0.012 50-60% Thyroid 3.192289111 Breast_cancer,PAAD NA NA boxplot CITF22-24E5.1 NA chr22 36816326 36819736 + 3411 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CITF22-24E5.1 NA 0.012 90-100% Kidney 4.229699572 Breast_cancer,HCC NA NA boxplot AC008984.5 NA chr19 54298105 54298814 - 710 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC008984.5 NA 0.012 90-100% NA NA Breast_cancer,CRC NA NA boxplot LINC01546 long intergenic non-protein coding RNA 1546 chrX 3271820 3284653 + 12834 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01546 NA 0.047 40-50% NA NA Normal,PAAD NA NA boxplot MTND5P14 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 5 pseudogene 14 chr9 5109496 5110762 + 1267 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MTND5P14 NA 0.106 30-40% Testis 1.235432037 CRC,HCC,Normal,PAAD NA NA boxplot CTD-2529P6.3 NA chr19 8821501 8824110 + 2610 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2529P6.3 NA 0.024 90-100% NA NA Breast_cancer,Normal,PAAD NA NA boxplot RP11-710C12.1 NA chr4 95549129 95552457 + 3329 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-710C12.1 NA 0.035 70-80% NA NA Breast_cancer,CRC,HCC NA NA boxplot MCM3AP-AS1 MCM3AP antisense RNA 1 chr21 46229217 46259390 + 30174 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MCM3AP-AS1 NA 0.918 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down) NA boxplot TPT1P9 tumor protein, translationally-controlled 1 pseudogene 9 chr9 118082869 118083382 - 514 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TPT1P9 NA 0.624 70-80% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-597M12.2 NA chr17 12982613 12983002 - 390 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-597M12.2 NA 0.012 70-80% NA NA NA NA NA boxplot RP11-697N18.4 NA chr8 47527397 47528148 + 752 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-697N18.4 NA 0.129 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC013404.1 NA chr2 211298941 211299189 - 249 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC013404.1 NA 0.012 40-50% NA NA HCC NA NA boxplot RSF1-IT2 RSF1 intronic transcript 2 chr11 77717712 77718411 - 700 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RSF1-IT2 NA 0.118 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot HSPE1P26 heat shock protein family E (Hsp10) member 1 pseudogene 26 chr6 157924402 157924676 + 275 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HSPE1P26 NA 0.047 90-100% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot RP11-263C24.1 NA chr11 75914201 75915213 + 1013 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-263C24.1 NA 0.012 80-90% NA NA NA NA NA boxplot RP11-85G21.3 NA chr1 157280716 157283068 + 2353 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-85G21.3 NA 0.859 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down),HCC(down),PAAD(down) NA boxplot AC007952.5 NA chr17 19092974 19096837 + 3864 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC007952.5 NA 0.047 80-90% NA NA Breast_cancer,Normal,PAAD NA NA boxplot RP11-603J24.5 NA chr12 56120033 56129619 - 9587 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-603J24.5 NA 0.471 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-713N11.6 NA chr12 25103124 25103869 - 746 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-713N11.6 NA 0.106 60-70% NA NA CRC,HCC,Normal NA NA boxplot AC022486.1 NA chrY 18491740 18547698 + 55959 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC022486.1 NA 0.082 90-100% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-346J10.2 NA chr5 100375700 100381398 - 5699 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-346J10.2 NA 0.082 70-80% NA NA CRC,HCC,Normal,PAAD NA NA boxplot MIR497HG mir-497-195 cluster host gene chr17 7015818 7019659 - 3842 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MIR497HG NA 0.541 30-40% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up) NA boxplot RP11-443F4.1 NA chr2 49563398 49595122 + 31725 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-443F4.1 exo_circ_043588,exo_circ_020704,exo_circ_038361,exo_circ_009764,exo_circ_043589,exo_circ_038362,exo_circ_027349,exo_circ_048767,exo_circ_021673,exo_circ_053852,exo_circ_025680,exo_circ_035505,exo_circ_020705,exo_circ_032855,exo_circ_013825,exo_circ_048768,exo_circ_053853,exo_circ_053854 0.706 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down) NA boxplot RP11-3D23.1 NA chrX 62779250 62780326 + 1077 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-3D23.1 NA 0.012 90-100% NA NA Breast_cancer,HCC,Normal NA NA boxplot RPL34-AS1 RPL34 antisense RNA 1 (head to head) chr4 108538190 108620460 - 82271 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL34-AS1 NA 0.588 20-30% Testis 1.058689497 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AD001527.4 NA chr19 36114362 36115146 + 785 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AD001527.4 NA 0.471 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CARMN cardiac mesoderm enhancer-associated non-coding RNA chr5 149406689 149432835 + 26147 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CARMN NA 0.024 10-20% NA NA Breast_cancer,Normal,PAAD NA NA boxplot RP11-850A17.1 NA chr18 54268346 54270028 - 1683 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-850A17.1 NA 0.035 60-70% NA NA CRC,HCC,PAAD NA NA boxplot AC073052.1 NA chr2 224499387 224500100 - 714 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC073052.1 NA 0.141 40-50% NA NA CRC,Normal NA NA boxplot RP13-635I23.3 NA chr3 143313067 143314429 - 1363 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP13-635I23.3 NA 0.059 80-90% Testis 4.906892038 Breast_cancer,CRC,HCC,Normal NA NA boxplot AC006547.13 NA chr22 20058030 20070569 - 12540 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC006547.13 NA 0.294 10-20% NA NA Breast_cancer,CRC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot AC007787.3 NA chr19 13081966 13082564 + 599 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC007787.3 NA 0.012 60-70% NA NA NA NA NA boxplot CTA-363E19.2 NA chr7 107192559 107193300 - 742 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTA-363E19.2 NA 0.176 70-80% NA NA CRC,HCC,Normal,PAAD NA NA boxplot FAM224A family with sequence similarity 224 member A (non-protein coding) chrY 18326253 18353210 + 26958 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FAM224A NA 0.047 80-90% Testis 3.310677859 HCC,PAAD NA NA boxplot TRIM80P tripartite motif containing 80, pseudogene chr17 75074306 75079549 + 5244 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TRIM80P NA 0.047 40-50% NA NA Breast_cancer,HCC,Normal NA NA boxplot LINC00240 long intergenic non-protein coding RNA 240 chr6 26956992 27023924 + 66933 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00240 NA 0.059 0-10% NA NA Normal,PAAD NA NA boxplot CTD-2095E4.3 NA chr17 32159311 32160371 + 1061 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2095E4.3 NA 0.235 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AL122127.25 NA chr14 105890084 105896577 + 6494 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AL122127.25 NA 0.647 20-30% Spleen 3.576729332 Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down) NA boxplot RP11-158I23.1 NA chr3 126056923 126058228 + 1306 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-158I23.1 NA 0.012 90-100% Testis 4.836096171 NA NA NA boxplot RPL18AP3 ribosomal protein L18a pseudogene 3 chr12 104265309 104265836 + 528 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL18AP3 NA 1 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-383G6.3 NA chr3 142465315 142472337 - 7023 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-383G6.3 NA 0.094 60-70% NA NA CRC,Normal,PAAD NA NA boxplot AC020951.1 NA chr19 11856032 11858302 + 2271 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC020951.1 NA 0.106 70-80% NA NA CRC,Normal NA NA boxplot RPL39P40 ribosomal protein L39 pseudogene 40 chr21 17500679 17500824 - 146 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL39P40 NA 0.059 20-30% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-212P7.3 NA chr7 128455840 128493859 + 38020 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-212P7.3 NA 0.741 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-440I14.2 NA chr4 174523701 174540344 - 16644 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-440I14.2 NA 0.012 20-30% NA NA Normal NA NA boxplot RP11-367J11.3 NA chr4 7094571 7103385 - 8815 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-367J11.3 exo_circ_038753 0.212 70-80% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-544O24.2 NA chr1 149345661 149357612 + 11952 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-544O24.2 NA 0.824 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-481J2.2 NA chr16 58421326 58462470 + 41145 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-481J2.2 NA 0.012 40-50% NA NA Breast_cancer,PAAD NA NA boxplot RP11-612J15.3 NA chr4 156972631 156972956 + 326 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-612J15.3 NA 0.012 90-100% NA NA CRC NA NA boxplot RP11-676J15.1 NA chr18 72868388 72881399 + 13012 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-676J15.1 NA 0.094 60-70% Brain 3.594850318 Breast_cancer,HCC,Normal,PAAD NA NA boxplot CTD-2034I21.1 NA chr16 50856614 50879278 - 22665 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2034I21.1 NA 0.012 30-40% NA NA HCC NA NA boxplot CERS6-AS1 CERS6 antisense RNA 1 chr2 168771953 168786961 - 15009 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CERS6-AS1 NA 0.247 10-20% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot RP11-432M8.12 NA chr5 17632088 17632683 + 596 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-432M8.12 NA 0.012 80-90% NA NA PAAD NA NA boxplot EWSAT1 Ewing sarcoma associated transcript 1 chr15 69072926 69095820 + 22895 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=EWSAT1 NA 0.294 20-30% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up) NA boxplot RP11-738O11.9 NA chr11 55863932 55881243 + 17312 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-738O11.9 NA 0.012 0-10% Testis 4.906892038 PAAD NA NA boxplot RP3-495K2.3 NA chr6 168962610 168964341 - 1732 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-495K2.3 NA 0.012 80-90% Testis 4.906892038 CRC NA NA boxplot AC002398.12 NA chr19 35754566 35755490 + 925 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC002398.12 NA 0.129 80-90% NA NA CRC,HCC,Normal,PAAD NA NA boxplot AL049758.2 NA chr22 42853403 42853799 - 397 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AL049758.2 NA 0.024 70-80% Thyroid 4.052432008 CRC,Normal NA NA boxplot RP11-886P16.6 NA chr19 8423355 8427827 - 4473 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-886P16.6 NA 0.012 80-90% NA NA Breast_cancer NA NA boxplot RP11-417L19.4 NA chr12 131924736 131929351 - 4616 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-417L19.4 NA 0.035 30-40% NA NA HCC,PAAD NA NA boxplot RP11-130F10.1 NA chr4 177444979 177677126 + 232148 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-130F10.1 NA 0.235 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP5-899B16.1 NA chr6 139854850 139860151 + 5302 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-899B16.1 NA 0.059 70-80% NA NA CRC,Normal,PAAD NA NA boxplot PDE4DIPP1 phosphodiesterase 4D interacting protein pseudogene 1 chr1 148080598 148093883 + 13286 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PDE4DIPP1 NA 0.071 70-80% NA NA HCC,Normal,PAAD NA NA boxplot OR6K4P olfactory receptor family 6 subfamily K member 4 pseudogene chr1 158724113 158725067 - 955 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=OR6K4P NA 0.047 70-80% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-349H17.2 NA chr18 26565723 26575626 - 9904 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-349H17.2 NA 0.024 20-30% NA NA Breast_cancer,CRC,HCC NA NA boxplot ST7-AS1 ST7 antisense RNA 1 chr7 116952446 116954334 - 1889 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ST7-AS1 NA 0.671 30-40% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-248E9.4 NA chr12 87753414 87753447 - 34 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-248E9.4 NA 0.012 70-80% NA NA NA NA NA boxplot RP1-224A6.8 NA chr1 22068340 22068827 - 488 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-224A6.8 NA 0.012 10-20% NA NA Normal,PAAD NA NA boxplot DEAR dual endothelin-1(VEGFsp)/angiotensin II receptor pseudogene chr4 152337655 152338098 + 444 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DEAR NA 0.012 90-100% NA NA HCC,Normal NA NA boxplot CTC-529G1.1 NA chr5 160685351 160692889 + 7539 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-529G1.1 NA 0.012 70-80% Testis 4.177339093 CRC,HCC NA NA boxplot LINC01320 long intergenic non-protein coding RNA 1320 chr2 34677555 34738231 + 60677 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01320 NA 0.024 40-50% NA NA Breast_cancer,HCC NA NA boxplot RP11-662G23.1 NA chr8 90806474 90859240 - 52767 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-662G23.1 NA 0.012 70-80% NA NA HCC NA NA boxplot CASC4P1 cancer susceptibility candidate 4 pseudogene 1 chr13 19563589 19564900 - 1312 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CASC4P1 NA 0.012 60-70% Testis 3.188385991 NA NA NA boxplot RP5-1009N12.1 NA chr8 30921060 30921335 + 276 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-1009N12.1 NA 0.671 20-30% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down) NA boxplot BMS1P17 BMS1, ribosome biogenesis factor pseudogene 17 chr14 19301704 19316914 + 15211 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=BMS1P17 NA 0.047 50-60% NA NA HCC,Normal,PAAD NA NA boxplot RP11-77H9.2 NA chr16 8848105 8860456 + 12352 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-77H9.2 NA 0.906 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),PAAD(up) NA boxplot CTC-429P9.5 NA chr19 16639967 16640668 - 702 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-429P9.5 NA 0.318 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-317M11.1 NA chr4 53659208 53737156 + 77949 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-317M11.1 NA 0.012 20-30% Kidney 1.330021291 Breast_cancer,Normal NA NA boxplot RP11-189E14.5 NA chr16 49442910 49454078 - 11169 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-189E14.5 NA 0.012 90-100% Testis 4.906892038 Breast_cancer,CRC NA NA boxplot RP11-290L1.7 NA chr12 75964799 75964995 + 197 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-290L1.7 NA 0.012 90-100% NA NA HCC NA NA boxplot CTD-2008L17.1 NA chr18 55893038 56023522 + 130485 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2008L17.1 NA 0.024 30-40% NA NA Breast_cancer,HCC,PAAD NA NA boxplot RP11-133N21.7 NA chr12 49595148 49595688 + 541 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-133N21.7 NA 0.024 50-60% NA NA CRC NA NA boxplot AC079781.8 NA chr7 97938439 97938794 - 356 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC079781.8 NA 0.071 20-30% NA NA CRC,Normal,PAAD NA NA boxplot HMGN1P36 high mobility group nucleosome binding domain 1 pseudogene 36 chr2 97827248 97827545 + 298 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HMGN1P36 NA 0.906 20-30% Cervix 4.906892038 CHD,CRC,HCC,Normal,PAAD CHD(up) NA boxplot RP11-415F23.3 NA chr3 16339308 16339871 + 564 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-415F23.3 NA 0.353 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot TMEM72-AS1 TMEM72 antisense RNA 1 chr10 44811024 44959689 - 148666 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TMEM72-AS1 NA 0.035 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP1-7G5.6 NA chr12 109880676 109888467 + 7792 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-7G5.6 NA 0.012 90-100% Testis 3.544121458 Normal NA NA boxplot EEF1A1P30 eukaryotic translation elongation factor 1 alpha 1 pseudogene 30 chrX 120210461 120212680 - 2220 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=EEF1A1P30 NA 0.106 10-20% NA NA Breast_cancer,CHD,CRC,Normal,PAAD CHD(up) NA boxplot RPL7P28 ribosomal protein L7 pseudogene 28 chr6 109327175 109327914 - 740 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL7P28 exo_circ_055049 0.012 80-90% NA NA Breast_cancer NA NA boxplot RP11-186N15.3 NA chr10 12244751 12247845 - 3095 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-186N15.3 NA 0.094 70-80% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot RP11-380N8.7 NA chr13 26222191 26222654 + 464 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-380N8.7 NA 0.188 70-80% NA NA CRC,HCC,Normal,PAAD NA NA boxplot AC012501.3 NA chr2 153420677 153421957 - 1281 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC012501.3 NA 0.024 30-40% Testis 3.461292418 PAAD NA NA boxplot RP11-167B3.2 NA chr15 98319687 98320237 - 551 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-167B3.2 NA 0.012 90-100% NA NA Breast_cancer,CRC NA NA boxplot RP11-1069G10.1 NA chr15 62827675 62884034 - 56360 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1069G10.1 NA 0.141 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC015936.3 NA chr17 44903161 44904546 - 1386 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC015936.3 NA 0.071 90-100% NA NA Breast_cancer,HCC,Normal NA NA boxplot CTA-305I2.1 NA chr7 102153355 102154463 - 1109 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTA-305I2.1 NA 0.024 20-30% NA NA Breast_cancer,CRC,Normal NA NA boxplot RPL39P34 ribosomal protein L39 pseudogene 34 chr19 52564076 52564231 + 156 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL39P34 NA 0.329 40-50% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP1-89D4.1 NA chr11 33237008 33237409 + 402 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-89D4.1 NA 0.047 10-20% Testis 3.976664777 HCC,Normal,PAAD NA NA boxplot AC017116.11 NA chr7 44064908 44066079 + 1172 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC017116.11 NA 0.388 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP13-93L13.2 NA chr9 89449558 89450754 + 1197 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP13-93L13.2 NA 0.024 60-70% NA NA Normal NA NA boxplot WI2-8325B5.1 NA chr20 61369879 61370855 + 977 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=WI2-8325B5.1 NA 0.024 60-70% NA NA Breast_cancer,CRC NA NA boxplot RP11-556I14.2 NA chr4 104653874 104966793 - 312920 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-556I14.2 exo_circ_054405,exo_circ_015037,exo_circ_016077,exo_circ_003731,exo_circ_043946 0.8 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down) NA boxplot AC008984.6 NA chr19 54328272 54331434 - 3163 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC008984.6 NA 0.012 20-30% Spleen 4.26187693 HCC,Normal NA NA boxplot CTD-2396E7.11 NA chr19 6469465 6470152 + 688 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2396E7.11 NA 0.188 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RHPN1-AS1 RHPN1 antisense RNA 1 (head to head) chr8 143366631 143368548 - 1918 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RHPN1-AS1 NA 0.071 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC009506.2 NA chr2 159462417 159463256 - 840 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC009506.2 NA 0.176 70-80% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CTD-2020K17.1 NA chr17 45190931 45222222 - 31292 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2020K17.1 NA 0.8 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(up) NA boxplot RP11-114M5.1 NA chr8 58424588 58426685 - 2098 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-114M5.1 NA 0.012 30-40% NA NA Normal NA NA boxplot SNX18P13 sorting nexin 18 pseudogene 13 chr21 13905960 13906488 - 529 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SNX18P13 NA 0.2 30-40% Testis 2.101436418 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-1060J15.4 NA chr12 27696388 27710770 - 14383 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1060J15.4 NA 0.224 40-50% Testis 2.775013068 CRC,HCC,Normal,PAAD NA NA boxplot RP11-1149O23.4 NA chr8 23225233 23230915 - 5683 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1149O23.4 NA 0.129 50-60% NA NA CRC,HCC,Normal NA NA boxplot RP11-459K23.2 NA chr1 208728688 208733184 + 4497 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-459K23.2 NA 0.012 80-90% Testis 4.906892038 Normal NA NA boxplot C1QTNF9-AS1 C1QTNF9 antisense RNA 1 chr13 24315725 24321598 - 5874 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=C1QTNF9-AS1 NA 0.071 60-70% NA NA HCC,Normal NA NA boxplot RP3-330M21.5 NA chr6 43213801 43223860 - 10060 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-330M21.5 NA 0.118 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RPL7P38 ribosomal protein L7 pseudogene 38 chr12 80028893 80029631 + 739 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL7P38 NA 0.059 60-70% NA NA HCC,Normal,PAAD NA NA boxplot RP11-57A1.1 NA chr17 72425939 72428852 + 2914 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-57A1.1 NA 0.024 80-90% NA NA Breast_cancer,HCC NA NA boxplot LINC01247 long intergenic non-protein coding RNA 1247 chr2 6366010 6375422 - 9413 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01247 NA 0.012 20-30% NA NA Breast_cancer,Normal NA NA boxplot RP11-723D22.2 NA chr8 38799643 38802296 + 2654 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-723D22.2 NA 0.035 60-70% Fallopian Tube 4.906892038 Breast_cancer,CRC,Normal NA NA boxplot RP11-452K12.6 NA chr10 97393197 97393547 - 351 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-452K12.6 NA 0.059 20-30% NA NA CRC,Normal NA NA boxplot BACH1-IT3 BACH1 intronic transcript 3 chr21 29496047 29500386 + 4340 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=BACH1-IT3 exo_circ_040697,exo_circ_058089 0.118 30-40% NA NA Breast_cancer,CRC,Normal,PAAD NA NA boxplot CTD-2143L24.1 NA chr5 9641305 9903826 - 262522 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2143L24.1 NA 0.012 90-100% Testis 4.855506021 Breast_cancer NA NA boxplot RP11-715H19.2 NA chr12 63151065 63154006 + 2942 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-715H19.2 NA 0.494 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-178L8.7 NA chr16 87317509 87318043 + 535 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-178L8.7 NA 0.141 40-50% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot PRORSD1P prolyl-tRNA synthetase associated domain containing 1, pseudogene chr2 55282319 55284522 + 2204 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PRORSD1P NA 0.282 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RPL7AP26 ribosomal protein L7a pseudogene 26 chr4 82490823 82491635 - 813 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL7AP26 NA 0.012 20-30% NA NA Normal NA NA boxplot RP11-557L19.1 NA chr2 7260871 7261504 + 634 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-557L19.1 NA 0.035 60-70% NA NA CRC,Normal NA NA boxplot RP11-864I4.4 NA chr11 62545999 62547699 + 1701 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-864I4.4 NA 0.035 70-80% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot AC018892.9 NA chr2 97081098 97083249 + 2152 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC018892.9 NA 0.012 90-100% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot CTD-2339M3.1 NA chr5 72878868 72879185 - 318 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2339M3.1 NA 0.012 90-100% NA NA Normal NA NA boxplot AL590762.7 NA chrX 71352418 71352988 + 571 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AL590762.7 NA 0.012 60-70% NA NA Normal NA NA boxplot RP11-415D17.3 NA chr6 75357214 75399300 + 42087 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-415D17.3 NA 0.012 50-60% Testis 4.811270892 Breast_cancer,CRC,Normal NA NA boxplot RP11-510M2.7 NA chr16 71420483 71421518 + 1036 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-510M2.7 NA 0.012 0-10% Testis 4.906892038 PAAD NA NA boxplot RP11-476B1.1 NA chr1 196044996 196061073 - 16078 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-476B1.1 NA 0.129 30-40% Testis 4.906892038 CRC,HCC,Normal NA NA boxplot UNC93B3 unc-93 homolog B3 pseudogene (C. elegans) chr3 75619506 75623849 - 4344 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=UNC93B3 NA 0.024 70-80% NA NA Breast_cancer,Normal NA NA boxplot RP11-10L12.4 NA chr4 102828055 102844075 + 16021 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-10L12.4 NA 0.412 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-290L1.3 NA chr12 76030494 76031378 + 885 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-290L1.3 NA 0.212 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CCDC162P coiled-coil domain containing 162, pseudogene chr6 109165833 109355063 + 189231 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CCDC162P exo_circ_055046,exo_circ_016287,exo_circ_055047,exo_circ_016286,exo_circ_055045,exo_circ_004069 0.541 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD PAAD(up) NA boxplot RP11-326L17.1 NA chr15 75950464 75951144 - 681 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-326L17.1 NA 0.024 0-10% NA NA PAAD NA NA boxplot SERPINB9P1 serpin peptidase inhibitor, clade B (ovalbumin), member 9, pseudogene 1 chr6 2854657 2881407 - 26751 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SERPINB9P1 NA 0.953 0-10% NA NA CHD,CRC,HCC,Normal,PAAD CHD(down),HCC(down),PAAD(down) NA boxplot RP11-897M7.4 NA chr12 131447337 131455436 - 8100 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-897M7.4 NA 0.012 10-20% NA NA Breast_cancer,HCC NA NA boxplot RP11-12A20.12 NA chr9 67714723 67714914 + 192 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-12A20.12 NA 0.012 60-70% NA NA Normal NA NA boxplot RP11-556E13.1 NA chr10 52556702 52755409 - 198708 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-556E13.1 exo_circ_022473 0.741 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-380O24.1 NA chr3 9292588 9363303 - 70716 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-380O24.1 NA 0.141 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CTD-2015H3.2 NA chr18 1655177 1779955 + 124779 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2015H3.2 NA 0.035 50-60% NA NA HCC,PAAD NA NA boxplot FLJ13224 uncharacterized LOC79857 chr12 31324316 31325829 + 1514 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FLJ13224 NA 0.306 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-528A4.2 NA chr3 193842560 193844024 - 1465 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-528A4.2 NA 0.035 60-70% NA NA Normal,PAAD NA NA boxplot AGGF1P8 angiogenic factor with G-patch and FHA domains 1 pseudogene 8 chr16 35258630 35259629 + 1000 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AGGF1P8 NA 0.012 30-40% NA NA PAAD NA NA boxplot LINC01479 long intergenic non-protein coding RNA 1479 chr12 67929235 67970017 + 40783 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01479 NA 0.012 70-80% NA NA CRC NA NA boxplot RP11-354P11.2 NA chr17 30238741 30252237 + 13497 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-354P11.2 NA 0.082 10-20% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CALM2P1 calmodulin 2 pseudogene 1 chr17 70241324 70241761 + 438 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CALM2P1 NA 0.012 20-30% NA NA Normal NA NA boxplot RP11-73K9.2 NA chr4 112229561 112231596 - 2036 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-73K9.2 NA 0.082 50-60% NA NA CRC,Normal NA NA boxplot LL0XNC01-36H8.1 NA chrX 48939992 48940808 + 817 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LL0XNC01-36H8.1 NA 0.012 60-70% NA NA Breast_cancer,CRC NA NA boxplot RPL12P24 ribosomal protein L12 pseudogene 24 chr8 105737280 105737765 - 486 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL12P24 NA 0.012 60-70% NA NA HCC NA NA boxplot AC004980.10 NA chr7 76650401 76650897 - 497 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC004980.10 NA 0.153 90-100% NA NA CRC,HCC,Normal,PAAD NA NA boxplot AC009237.8 NA chr2 95525345 95532405 + 7061 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC009237.8 NA 0.259 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-815J21.2 NA chr15 85579046 85580178 - 1133 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-815J21.2 NA 0.435 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot AL133245.2 NA chr2 32321638 32323002 + 1365 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AL133245.2 NA 0.071 50-60% NA NA CRC,HCC,Normal NA NA boxplot CDRT15P1 CMT1A duplicated region transcript 15 pseudogene 1 chr17 14024514 14025488 + 975 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CDRT15P1 exo_circ_040340 0.082 70-80% Testis 1.41438916 Breast_cancer,CRC,Normal NA NA boxplot MTND2P2 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 2 pseudogene 2 chrX 102786813 102788387 + 1575 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MTND2P2 NA 0.047 20-30% NA NA CRC,Normal,PAAD NA NA boxplot TGIF2P1 TGFB-induced factor homeobox 2 pseudogene 1 chr1 244394976 244395660 - 685 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TGIF2P1 NA 0.118 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CTD-3074O7.5 NA chr11 66473490 66480233 - 6744 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-3074O7.5 NA 0.659 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down) NA boxplot AGGF1P3 angiogenic factor with G-patch and FHA domains 1 pseudogene 3 chr3 75653561 75654773 - 1213 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AGGF1P3 NA 0.094 60-70% Testis 1.20104247 CRC,Normal,PAAD NA NA boxplot RP11-484D2.4 NA chr11 43390283 43395495 + 5213 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-484D2.4 NA 0.024 70-80% NA NA Breast_cancer,CRC NA NA boxplot CTB-96E2.7 NA chr17 28361601 28362859 - 1259 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTB-96E2.7 NA 0.165 20-30% NA NA HCC,Normal,PAAD NA NA boxplot LINC01340 long intergenic non-protein coding RNA 1340 chr5 97504696 97671046 + 166351 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01340 exo_circ_022066 0.024 80-90% NA NA HCC,Normal NA NA boxplot RP11-556I14.1 NA chr4 104907357 105120000 + 212644 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-556I14.1 exo_circ_054407,exo_circ_043948 0.482 10-20% Kidney 4.466999593 Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot RP11-12J10.4 NA chr10 124623353 124624079 + 727 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-12J10.4 NA 0.388 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-166N6.1 NA chr3 150871045 150891060 - 20016 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-166N6.1 NA 0.012 70-80% NA NA PAAD NA NA boxplot RPS26P3 ribosomal protein S26 pseudogene 3 chr9 9090898 9091245 + 348 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPS26P3 NA 0.882 20-30% NA NA CHD,CRC,HCC,Normal,PAAD CHD(up) NA boxplot RP11-578F21.13 NA chr15 28830619 28831182 - 564 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-578F21.13 NA 0.012 10-20% Testis 4.906892038 Normal NA NA boxplot RP4-635A23.3 NA chr1 185262286 185264356 - 2071 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-635A23.3 NA 0.012 90-100% Testis 1.905288456 Breast_cancer NA NA boxplot RPS4XP13 ribosomal protein S4X pseudogene 13 chr11 57576292 57577080 - 789 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPS4XP13 NA 0.035 70-80% Testis 4.906892038 CRC NA NA boxplot RP4-785G19.2 NA chr20 34245953 34246537 - 585 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-785G19.2 NA 0.035 60-70% NA NA CRC,PAAD NA NA boxplot NRBF2P5 nuclear receptor binding factor 2 pseudogene 5 chr10 5776071 5776858 + 788 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NRBF2P5 NA 0.012 10-20% NA NA PAAD NA NA boxplot RP11-727A23.5 NA chr11 83184491 83193794 - 9304 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-727A23.5 NA 0.565 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-20F18.1 NA chr2 160849313 160850676 - 1364 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-20F18.1 NA 0.012 80-90% NA NA NA NA NA boxplot KB-1396H2.2 NA chr8 101871830 101872549 - 720 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KB-1396H2.2 NA 0.094 80-90% NA NA CRC,Normal NA NA boxplot RP3-508I15.14 NA chr22 38739003 38749041 + 10039 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-508I15.14 NA 0.094 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-412H9.2 NA chr1 218912757 218916184 - 3428 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-412H9.2 NA 0.082 60-70% Testis 4.906892038 CRC,Normal NA NA boxplot RP11-231C14.5 NA chr16 29478879 29482591 + 3713 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-231C14.5 NA 0.106 80-90% Whole Blood 4.906892038 CRC,HCC,Normal,PAAD NA NA boxplot RP11-1I2.1 NA chr18 39314240 39328008 + 13769 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1I2.1 NA 0.094 60-70% NA NA Breast_cancer,HCC,Normal NA NA boxplot RP11-549L6.2 NA chr10 110257064 110257843 + 780 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-549L6.2 NA 0.129 40-50% NA NA CRC,Normal,PAAD NA NA boxplot RP11-311F12.1 NA chr17 19719059 19722428 + 3370 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-311F12.1 NA 0.024 80-90% NA NA Breast_cancer,CRC,Normal NA NA boxplot RP11-106M3.3 NA chr15 72278867 72351794 + 72928 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-106M3.3 NA 0.235 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot IFNWP9 interferon, omega 1 pseudogene 9 chr9 21190654 21191244 - 591 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=IFNWP9 NA 0.012 60-70% NA NA Breast_cancer,CRC NA NA boxplot RPL36AP29 ribosomal protein L36a pseudogene 29 chr7 16208945 16209265 + 321 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL36AP29 NA 0.012 60-70% Testis 4.172853747 HCC NA NA boxplot AC007950.2 NA chr15 63500737 63503083 - 2347 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC007950.2 NA 0.047 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot AC008268.2 NA chr2 95789654 95800166 + 10513 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC008268.2 NA 0.141 60-70% Testis 1.674122135 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-320N21.2 NA chr8 95071732 95087924 - 16193 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-320N21.2 NA 0.012 10-20% Testis 2.261849462 CRC,Normal NA NA boxplot USP9YP28 NA chrY 18833002 18839313 - 6312 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=USP9YP28 NA 0.082 80-90% Brain 4.906892038 CRC,HCC,PAAD NA NA boxplot OR9A1P olfactory receptor family 9 subfamily A member 1 pseudogene chr7 141887148 141888092 + 945 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=OR9A1P NA 0.012 80-90% NA NA Breast_cancer NA NA boxplot ANKRD26P4 ankyrin repeat domain 26 pseudogene 4 chr13 31311289 31312921 + 1633 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ANKRD26P4 NA 0.035 40-50% NA NA CRC NA NA boxplot RP11-500G22.5 NA chr10 121965764 121967700 + 1937 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-500G22.5 NA 0.094 50-60% NA NA HCC,Normal,PAAD NA NA boxplot GS1-184P14.2 NA chrX 24429573 24429920 - 348 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GS1-184P14.2 NA 0.929 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(down) NA boxplot OR52U1P olfactory receptor family 52 subfamily U member 1 pseudogene chr11 5719290 5720212 + 923 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=OR52U1P NA 0.047 60-70% NA NA Breast_cancer,CRC,HCC NA NA boxplot AC011747.3 NA chr2 8543592 8575501 - 31910 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC011747.3 NA 0.024 70-80% NA NA Breast_cancer,CRC,Normal NA NA boxplot CITF22-92A6.1 NA chr22 46013606 46015498 + 1893 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CITF22-92A6.1 NA 0.353 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-372B4.3 NA chr12 2885819 2886329 + 511 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-372B4.3 NA 0.071 10-20% NA NA CRC,HCC,Normal NA NA boxplot MYLK-AS1 MYLK antisense RNA 1 chr3 123585542 123644568 + 59027 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MYLK-AS1 NA 0.459 30-40% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-350J20.5 NA chr6 149796151 149826294 - 30144 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-350J20.5 NA 0.565 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-325O24.1 NA chr6 127654860 127655278 - 419 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-325O24.1 NA 0.012 90-100% NA NA Normal NA NA boxplot CTD-2358C21.4 NA chr16 31709113 31711984 - 2872 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2358C21.4 NA 0.024 90-100% NA NA Breast_cancer,HCC NA NA boxplot N4BP2L2-IT2 N4BPL2 intronic transcript 2 chr13 32504506 32509395 - 4890 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=N4BP2L2-IT2 NA 0.318 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CRC(up),PAAD(up) NA boxplot ZBTB40-IT1 ZBTB40 intronic transcript 1 chr1 22517474 22519708 + 2235 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ZBTB40-IT1 NA 0.176 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-708B6.2 NA chr11 109355085 109583907 - 228823 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-708B6.2 exo_circ_056272,exo_circ_056271,exo_circ_004754,exo_circ_021034 0.729 0-10% Testis 4.906892038 CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(up) NA boxplot RP1-97J1.2 NA chr6 111900489 111901851 - 1363 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-97J1.2 exo_circ_049686 0.012 80-90% Testis 4.488571235 Breast_cancer,PAAD NA NA boxplot RP11-522B15.1 NA chr15 96448154 96448493 + 340 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-522B15.1 NA 0.012 20-30% Testis 4.063749226 Breast_cancer,HCC NA NA boxplot AC073621.2 NA chr17 17422681 17423704 + 1024 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC073621.2 NA 0.024 80-90% NA NA Breast_cancer,HCC NA NA boxplot RP11-1252I4.2 NA chr5 177939622 177983054 + 43433 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1252I4.2 NA 0.341 60-70% Pituitary 1.476186898 CRC,HCC,Normal,PAAD NA NA boxplot RP11-15B24.5 NA chr9 81977614 82780194 + 802581 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-15B24.5 NA 0.118 40-50% Testis 4.648735631 Breast_cancer,CRC,HCC,Normal NA NA boxplot RP11-496B10.3 NA chr3 180566718 180601935 - 35218 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-496B10.3 NA 0.059 30-40% Testis 2.952339445 HCC,Normal NA NA boxplot RP11-262D11.2 NA chrX 72159845 72160346 + 502 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-262D11.2 NA 0.024 90-100% NA NA Normal NA NA boxplot PLA2G4C-AS1 PLA2G4C antisense RNA 1 chr19 48061371 48064945 + 3575 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PLA2G4C-AS1 NA 0.035 70-80% NA NA Normal NA NA boxplot CTD-2263F21.1 NA chr5 38460925 38468339 - 7415 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2263F21.1 NA 0.047 20-30% Muscle 1.618146964 Breast_cancer,CRC,PAAD NA NA boxplot RP4-704D23.1 NA chr1 14348955 14391575 - 42621 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-704D23.1 NA 0.012 10-20% Testis 4.641213573 NA NA NA boxplot CTC-450M9.1 NA chr19 38108500 38109533 - 1034 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-450M9.1 NA 0.012 20-30% NA NA Normal NA NA boxplot RP4-641G12.3 NA chr1 78666272 78666695 + 424 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-641G12.3 NA 0.118 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-435O5.6 NA chr9 95494924 95495379 + 456 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-435O5.6 NA 0.012 60-70% NA NA Breast_cancer,Normal NA NA boxplot LINC00167 long intergenic non-protein coding RNA 167 chr11 130002938 130004356 + 1419 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00167 NA 0.071 70-80% Testis 2.934743365 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-312A15.3 NA chr4 157968412 157969615 - 1204 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-312A15.3 NA 0.012 10-20% Testis 4.906892038 Breast_cancer,PAAD NA NA boxplot RP11-517C16.4 NA chr16 84495599 84497495 + 1897 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-517C16.4 NA 0.024 50-60% NA NA CRC,Normal NA NA boxplot RPL23AP8 ribosomal protein L23a pseudogene 8 chr14 34694170 34694644 + 475 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL23AP8 NA 0.012 10-20% NA NA HCC NA NA boxplot EIF4HP1 eukaryotic translation initiation factor 4H pseudogene 1 chr7 27458163 27458849 - 687 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=EIF4HP1 NA 1 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP1-63M2.5 NA chr20 33674517 33675380 + 864 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-63M2.5 NA 0.024 90-100% NA NA Normal NA NA boxplot RP11-1008C21.1 NA chr15 37984766 38062340 + 77575 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1008C21.1 NA 0.529 10-20% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(down) NA boxplot KLF17P1 Kruppel-like factor 17 pseudogene 1 chr12 62234390 62235515 - 1126 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KLF17P1 NA 0.071 70-80% Testis 4.906892038 Breast_cancer,CRC,Normal NA NA boxplot TSSK1A testis-specific serine kinase 1A pseudogene chr22 19124879 19125646 + 768 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TSSK1A NA 0.129 70-80% Testis 1.802469807 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot ROCK1P1 Rho-associated, coiled-coil containing protein kinase 1 pseudogene 1 chr18 109065 122219 + 13155 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ROCK1P1 NA 0.988 10-20% Testis 2.053222611 Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up) NA boxplot ALG1L7P asparagine-linked glycosylation 1-like 7, pseudogene chr4 3935447 3942519 + 7073 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ALG1L7P NA 0.024 80-90% NA NA Breast_cancer,HCC,Normal NA NA boxplot CTD-3076O17.1 NA chr15 99970215 99974010 + 3796 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-3076O17.1 NA 0.129 60-70% NA NA CRC,HCC,Normal NA NA boxplot AC005786.3 NA chr19 3568120 3568273 - 154 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC005786.3 NA 0.024 70-80% Testis 4.906892038 CRC NA NA boxplot RP11-410L14.2 NA chr8 98996763 99013044 - 16282 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-410L14.2 NA 0.471 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-496I2.8 NA chr14 19220796 19220912 - 117 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-496I2.8 NA 0.012 30-40% NA NA Breast_cancer,HCC NA NA boxplot RP11-809C18.3 NA chr10 628638 631255 + 2618 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-809C18.3 NA 0.035 0-10% Brain 2.26872849 Breast_cancer,HCC,PAAD NA NA boxplot RPL18P10 ribosomal protein L18 pseudogene 10 chr13 50099331 50099868 + 538 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL18P10 NA 0.012 90-100% NA NA Breast_cancer,CRC NA NA boxplot KRT18P22 keratin 18 pseudogene 22 chr6 116457323 116458669 - 1347 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KRT18P22 NA 0.153 70-80% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot PTMAP2 prothymosin, alpha pseudogene 2 chr5 118973796 118974122 + 327 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PTMAP2 NA 1 0-10% NA NA CHD,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-84C10.4 NA chr14 20995837 20999163 - 3327 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-84C10.4 NA 0.012 10-20% NA NA Breast_cancer,Normal,PAAD NA NA boxplot AC108004.3 NA chr17 404468 414023 - 9556 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC108004.3 NA 0.788 10-20% Testis 4.092168339 CRC,HCC,Normal,PAAD CHD(down),CRC(down),PAAD(down) NA boxplot ZBTB11-AS1 ZBTB11 antisense RNA 1 chr3 101676475 101679217 + 2743 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ZBTB11-AS1 NA 0.882 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down),PAAD(down) NA boxplot RP11-769O8.1 NA chr18 735746 737459 + 1714 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-769O8.1 NA 0.129 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-1E22.1 NA chr4 132027175 132028434 - 1260 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1E22.1 NA 0.047 70-80% Testis 4.906892038 CRC,HCC NA NA boxplot GULOP gulonolactone (L-) oxidase, pseudogene chr8 27560274 27589073 + 28800 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GULOP NA 0.035 30-40% NA NA Breast_cancer,CRC NA NA boxplot CTD-2561B21.8 NA chr17 81003335 81005132 + 1798 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2561B21.8 NA 0.482 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-11N9.4 NA chr8 32996178 33044855 + 48678 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-11N9.4 NA 0.918 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot HMGN2P4 high mobility group nucleosomal binding domain 2 pseudogene 4 chr5 76242024 76242404 - 381 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HMGN2P4 NA 0.988 10-20% Brain 4.906892038 CHD,CRC,HCC,Normal,PAAD PAAD(down) NA boxplot STK24-AS1 STK24 antisense RNA 1 chr13 98577244 98578830 + 1587 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=STK24-AS1 NA 0.318 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot TSPY26P testis specific protein, Y-linked 26, pseudogene chr20 32186477 32190527 - 4051 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TSPY26P NA 0.776 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down),PAAD(up) NA boxplot AC011753.5 NA chr2 109594693 109605698 - 11006 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC011753.5 NA 0.035 80-90% Testis 4.378476491 Breast_cancer,CRC,PAAD NA NA boxplot MIR22HG MIR22 host gene chr17 1711493 1717174 - 5682 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MIR22HG NA 0.976 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up) NA boxplot RP11-20E24.1 NA chr12 76562294 76615567 + 53274 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-20E24.1 NA 0.106 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RPL4P5 ribosomal protein L4 pseudogene 5 chr9 7477045 7478320 - 1276 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL4P5 NA 0.741 80-90% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot KB-431C1.5 NA chr8 102256392 102257821 + 1430 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KB-431C1.5 NA 0.094 50-60% NA NA CRC,HCC,Normal NA NA boxplot FAM177A1P1 Putative protein FAM177A2 chr4 98955982 98956767 + 786 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FAM177A1P1 NA 0.012 90-100% Testis 4.906892038 NA NA NA boxplot CTD-2033D24.2 NA chr17 55526964 55561577 - 34614 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2033D24.2 NA 0.012 50-60% Testis 3.824169949 Breast_cancer,HCC NA NA boxplot RPS15AP40 ribosomal protein S15a pseudogene 40 chrX 36374793 36375183 - 391 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPS15AP40 NA 0.012 70-80% NA NA Normal,PAAD NA NA boxplot AC125232.1 NA chr2 87031815 87053069 - 21255 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC125232.1 NA 0.918 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(up) NA boxplot IFNWP19 interferon, omega 1 pseudogene 19 chr9 21455484 21456049 + 566 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=IFNWP19 NA 0.012 80-90% NA NA Breast_cancer,HCC,PAAD NA NA boxplot CTD-2555O16.4 NA chr14 64440369 64442238 - 1870 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2555O16.4 NA 0.541 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot MIR3663HG MIR3663 host gene chr10 117158656 117169059 - 10404 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MIR3663HG NA 0.012 50-60% NA NA HCC NA NA boxplot RP11-325L7.1 NA chr5 138032774 138037266 + 4493 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-325L7.1 NA 0.059 80-90% Testis 2.118346509 Breast_cancer,CRC,HCC,Normal NA NA boxplot TONSL-AS1 TONSL antisense RNA 1 chr8 144437675 144439971 + 2297 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TONSL-AS1 exo_circ_039283,exo_circ_050187 0.141 70-80% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-465N4.5 NA chr1 201995696 201996352 - 657 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-465N4.5 NA 0.106 50-60% NA NA CRC,HCC,PAAD NA NA boxplot EEF1E1P1 eukaryotic translation elongation factor 1 epsilon 1 pseudogene 1 chr2 111887914 111888741 + 828 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=EEF1E1P1 NA 0.012 60-70% NA NA Normal NA NA boxplot LINC00943 long intergenic non-protein coding RNA 943 chr12 126726270 126746252 + 19983 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00943 NA 0.047 60-70% Testis 4.099231382 Breast_cancer,CRC,HCC,Normal NA NA boxplot RPL37AP1 ribosomal protein L37a pseudogene 1 chr20 44466564 44466842 - 279 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL37AP1 NA 0.235 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot HAGLROS HAGLR opposite strand (non-protein coding) chr2 176177717 176179008 + 1292 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HAGLROS NA 0.2 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-481C4.2 NA chr17 51183191 51186403 - 3213 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-481C4.2 NA 0.447 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot SEPT7-AS1 SEPT7 antisense RNA 1 (head to head) chr7 35751856 35800616 - 48761 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SEPT7-AS1 NA 0.906 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down),HCC(down) NA boxplot PDCD4-AS1 PDCD4 antisense RNA 1 chr10 110869868 110872233 - 2366 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PDCD4-AS1 NA 0.882 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD PAAD(down) NA boxplot RP11-83C7.3 NA chr4 38390754 38391675 + 922 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-83C7.3 NA 0.024 40-50% NA NA PAAD NA NA boxplot AC114812.9 NA chr2 233738952 233741957 + 3006 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC114812.9 NA 0.024 10-20% NA NA Breast_cancer,PAAD NA NA boxplot RP11-174G6.1 NA chr12 14665655 14757963 + 92309 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-174G6.1 exo_circ_016844,exo_circ_056568 0.094 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot LINC01153 long intergenic non-protein coding RNA 1153 chr10 121178700 121185966 + 7267 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01153 NA 0.035 20-30% NA NA Breast_cancer,CRC,HCC,PAAD NA NA boxplot RP11-1134I14.8 NA chr8 47190772 47193262 + 2491 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1134I14.8 NA 0.071 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-452L6.1 NA chr16 31449535 31453493 - 3959 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-452L6.1 NA 0.153 50-60% NA NA Breast_cancer,CRC,Normal,PAAD NA NA boxplot RP11-379P15.1 NA chr11 8169167 8178903 + 9737 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-379P15.1 NA 0.012 90-100% Testis 4.576672074 Breast_cancer,CRC NA NA boxplot EZR-AS1 EZR antisense RNA 1 chr6 158818011 158820593 + 2583 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=EZR-AS1 NA 0.129 20-30% Testis 4.110962835 CRC,HCC,Normal,PAAD NA NA boxplot HMGN1P8 high mobility group nucleosome binding domain 1 pseudogene 8 chr3 167694355 167694642 - 288 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HMGN1P8 NA 0.118 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-392P7.6 NA chr12 12927726 12984645 + 56920 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-392P7.6 exo_circ_056552 0.694 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(up) NA boxplot RP11-617F23.2 NA chr15 90024955 90026003 + 1049 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-617F23.2 NA 0.141 20-30% NA NA CRC,Normal NA NA boxplot MTCO1P12 MT-CO1 pseudogene 12 chr1 631074 632616 + 1543 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MTCO1P12 NA 0.929 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(up),HCC(up),PAAD(up) NA boxplot RP11-173B14.4 NA chr13 75631271 75632135 + 865 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-173B14.4 NA 0.035 80-90% NA NA Breast_cancer,CRC,Normal NA NA boxplot RP1-53C18.3 NA chr11 34404663 34404949 - 287 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-53C18.3 NA 0.012 90-100% NA NA PAAD NA NA boxplot AC007563.3 NA chr2 216799608 216805335 + 5728 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC007563.3 NA 0.071 70-80% Testis 2.441492585 CRC,HCC,Normal NA NA boxplot SEPT14P13 septin 14 pseudogene 13 chr1 485026 485208 - 183 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SEPT14P13 NA 0.024 80-90% NA NA HCC,PAAD NA NA boxplot RP11-423C15.3 NA chr9 125743754 125746552 - 2799 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-423C15.3 NA 0.035 0-10% Testis 3.499089945 Breast_cancer,Normal,PAAD NA NA boxplot ASH1L-IT1 ASH1L intronic transcript 1 chr1 155396010 155396978 - 969 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ASH1L-IT1 exo_circ_043063 0.365 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-76I23.7 NA chr11 47577725 47578277 + 553 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-76I23.7 NA 0.259 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-57H14.5 NA chr10 112831169 112832454 + 1286 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-57H14.5 NA 0.082 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RPL4P1 ribosomal protein L4 pseudogene 1 chr14 21750269 21751546 + 1278 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL4P1 NA 0.212 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-314A20.2 NA chr17 4704230 4705529 + 1300 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-314A20.2 NA 0.094 50-60% NA NA HCC,Normal,PAAD NA NA boxplot RP11-255E6.6 NA chr3 113947005 113947570 - 566 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-255E6.6 NA 0.024 90-100% Testis 3.143631649 CRC NA NA boxplot POU6F2-AS2 POU6F2 antisense RNA 2 chr7 38984243 39013551 - 29309 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=POU6F2-AS2 NA 0.012 70-80% Bladder 4.646620655 Breast_cancer,Normal NA NA boxplot AC068535.3 NA chr2 104412227 104414008 - 1782 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC068535.3 NA 0.035 90-100% Liver 4.84838916 Normal NA NA boxplot RP3-425C14.4 NA chr6 122436789 122439223 - 2435 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-425C14.4 NA 0.671 10-20% NA NA CRC,HCC,Normal,PAAD CHD(down),HCC(down),PAAD(down) NA boxplot RP11-392P7.1 NA chr12 12850982 12851740 + 759 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-392P7.1 NA 0.365 80-90% Thyroid 4.013889233 CRC,HCC,Normal,PAAD NA NA boxplot RP11-618I10.1 NA chr4 69242628 69250815 + 8188 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-618I10.1 NA 0.024 40-50% Testis 3.990801876 CRC,HCC NA NA boxplot PDIA3P2 protein disulfide isomerase family A member 3 pseudogene 2 chr15 43649123 43649280 + 158 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PDIA3P2 NA 0.024 60-70% NA NA Normal,PAAD NA NA boxplot RP11-196H14.3 NA chr12 64146388 64147857 - 1470 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-196H14.3 NA 0.012 80-90% NA NA HCC,Normal NA NA boxplot RP11-403I13.7 NA chr1 143790010 143797108 + 7099 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-403I13.7 NA 0.376 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP5-890O15.3 NA chr20 47160838 47161700 - 863 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-890O15.3 NA 0.012 10-20% NA NA Breast_cancer,PAAD NA NA boxplot RP11-578C11.2 NA chr17 27411438 27412806 - 1369 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-578C11.2 exo_circ_028817 0.553 10-20% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot RP11-10J18.3 NA chr9 124514938 124516056 - 1119 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-10J18.3 NA 0.024 60-70% Testis 4.906892038 HCC NA NA boxplot AP001628.6 NA chr21 42831040 42836477 - 5438 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AP001628.6 NA 0.082 70-80% NA NA Breast_cancer,CRC,Normal NA NA boxplot AGAP7P ArfGAP with GTPase domain, ankyrin repeat and PH domain 7, pseudogene chr10 46109621 46131358 + 21738 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AGAP7P NA 0.718 20-30% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-562A8.5 NA chr15 50494018 50497080 - 3063 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-562A8.5 NA 0.047 70-80% NA NA CRC,HCC NA NA boxplot RP11-486O13.4 NA chr14 70425812 70547464 - 121653 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-486O13.4 NA 0.024 50-60% Testis 4.077797531 HCC NA NA boxplot LINC00623 long intergenic non-protein coding RNA 623 chr1 120913275 121009291 + 96017 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00623 NA 1 0-10% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot HERC2P2 hect domain and RLD 2 pseudogene 2 chr15 22495570 22590815 + 95246 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HERC2P2 NA 1 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up),CRC(up),PAAD(up) NA boxplot HMGB1P23 high mobility group box 1 pseudogene 23 chr8 29218905 29219472 + 568 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HMGB1P23 NA 0.024 90-100% NA NA CRC,HCC NA NA boxplot RP11-298A10.2 NA chr7 143623776 143624398 - 623 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-298A10.2 NA 0.012 60-70% NA NA Normal NA NA boxplot RP4-686C3.7 NA chr20 2664352 2665874 + 1523 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-686C3.7 NA 0.012 90-100% NA NA Normal NA NA boxplot RP5-855D21.1 NA chr8 234347 234887 - 541 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-855D21.1 NA 0.012 80-90% NA NA Breast_cancer,HCC NA NA boxplot LINC01508 long intergenic non-protein coding RNA 1508 chr9 90300902 90433505 - 132604 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01508 NA 0.035 10-20% NA NA Breast_cancer,CHD,PAAD NA NA boxplot CTD-3252C9.2 NA chr19 13796574 13796933 - 360 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-3252C9.2 NA 0.012 90-100% NA NA Breast_cancer NA NA boxplot AC010132.10 NA chr7 42829672 42844438 - 14767 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC010132.10 NA 0.012 90-100% NA NA Breast_cancer,CRC,Normal,PAAD NA NA boxplot RP11-700H6.1 NA chr17 50934989 50944713 - 9725 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-700H6.1 NA 0.047 60-70% NA NA Breast_cancer,HCC,Normal NA NA boxplot RP11-589M4.4 NA chr14 52871458 52872217 + 760 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-589M4.4 NA 0.012 80-90% NA NA CRC NA NA boxplot AC007238.1 NA chr2 58460292 58462032 - 1741 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC007238.1 NA 0.929 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot AC002116.8 NA chr19 36008638 36014235 - 5598 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC002116.8 NA 0.729 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-688I9.2 NA chr11 126992452 126995458 + 3007 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-688I9.2 NA 0.024 80-90% Testis 4.786754786 Normal NA NA boxplot RP11-2G17.1 NA chr3 149357169 149357545 - 377 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-2G17.1 NA 0.012 80-90% NA NA NA NA NA boxplot RP11-342L8.2 NA chr6 79552794 79553160 + 367 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-342L8.2 NA 0.071 40-50% NA NA CRC,Normal,PAAD NA NA boxplot CTA-407F11.8 NA chr22 25561117 25564462 - 3346 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTA-407F11.8 NA 0.282 50-60% Testis 4.502455366 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-386P4.1 NA chr18 32581528 32582828 + 1301 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-386P4.1 NA 0.012 80-90% NA NA Normal NA NA boxplot AHCYP4 adenosylhomocysteinase pseudogene 4 chr2 138901433 138902747 - 1315 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AHCYP4 NA 0.012 50-60% Testis 4.906892038 Breast_cancer,Normal NA NA boxplot DDX39B-AS1 DDX39B antisense RNA 1 chr6 31542304 31543138 + 835 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DDX39B-AS1 NA 0.012 80-90% Testis 1.284084952 CRC NA NA boxplot RP11-204E9.3 NA chr6 21528739 21595593 - 66855 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-204E9.3 NA 0.059 40-50% NA NA CRC,HCC,PAAD NA NA boxplot RP4-745E8.2 NA chr1 20294211 20323187 - 28977 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-745E8.2 NA 0.012 0-10% Testis 4.906892038 Normal NA NA boxplot AC013271.5 NA chr2 109937438 109985124 + 47687 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC013271.5 NA 0.376 70-80% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot NANOGP4 Nanog homeobox pseudogene 4 chr7 29212302 29213214 + 913 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NANOGP4 NA 0.165 20-30% NA NA Breast_cancer,CRC,Normal,PAAD NA NA boxplot RP11-48B3.3 NA chr8 80535006 80539135 - 4130 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-48B3.3 NA 0.024 90-100% NA NA Breast_cancer,HCC NA NA boxplot RP13-228J13.8 NA chrX 155292169 155293432 + 1264 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP13-228J13.8 NA 0.035 80-90% NA NA Normal,PAAD NA NA boxplot RP11-356C4.6 NA chr16 90174062 90175865 - 1804 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-356C4.6 NA 0.012 50-60% NA NA HCC NA NA boxplot NBPF5P neuroblastoma breakpoint family member 5, pseudogene chr1 108375838 108410814 + 34977 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NBPF5P NA 0.024 40-50% Testis 4.580634815 HCC NA NA boxplot RP11-452F19.3 NA chr1 222815022 222837384 + 22363 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-452F19.3 exo_circ_046800,exo_circ_038009,exo_circ_014852,exo_circ_030441 0.882 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down) NA boxplot OR13E1P olfactory receptor family 13 subfamily E member 1 pseudogene chr9 35859062 35859983 - 922 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=OR13E1P NA 0.012 10-20% NA NA Breast_cancer,Normal NA NA boxplot RP3-337H4.10 NA chr6 43561872 43562419 + 548 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-337H4.10 NA 0.047 80-90% NA NA CRC,HCC,Normal,PAAD NA NA boxplot LINC00601 long intergenic non-protein coding RNA 601 chr10 126413869 126421879 - 8011 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00601 NA 0.012 80-90% NA NA NA NA NA boxplot RP11-753C18.12 NA chr10 102845761 102854513 - 8753 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-753C18.12 NA 0.024 50-60% NA NA Breast_cancer,HCC,Normal NA NA boxplot RP11-855A2.2 NA chr17 67973934 67976072 + 2139 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-855A2.2 NA 0.8 20-30% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot RP11-166B2.7 NA chr16 11976851 11977850 - 1000 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-166B2.7 NA 0.024 80-90% NA NA Breast_cancer,HCC,PAAD NA NA boxplot RP11-54O15.3 NA chr9 94928551 94934946 - 6396 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-54O15.3 NA 0.012 40-50% Testis 2.188881202 CRC,HCC NA NA boxplot MTCO1P40 MT-CO1 pseudogene 40 chr17 53105734 53106358 + 625 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MTCO1P40 NA 0.153 90-100% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-147L13.2 NA chr17 68246629 68247938 - 1310 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-147L13.2 NA 0.071 40-50% NA NA Breast_cancer,CRC,Normal,PAAD NA NA boxplot RP11-3D4.3 NA chr15 33851785 33856809 - 5025 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-3D4.3 NA 0.071 60-70% NA NA Breast_cancer,CRC,Normal,PAAD NA NA boxplot RP11-709D24.6 NA chr16 4634329 4640623 - 6295 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-709D24.6 NA 0.012 20-30% Testis 2.104604842 Breast_cancer,HCC NA NA boxplot RP11-266L9.8 NA chr16 25106569 25107102 - 534 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-266L9.8 NA 0.141 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-208G20.2 NA chr7 152367171 152367260 + 90 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-208G20.2 NA 0.012 10-20% NA NA Normal NA NA boxplot RP11-561B11.3 NA chr14 35362232 35363628 - 1397 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-561B11.3 NA 0.2 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CTD-3035D6.2 NA chr14 90822365 90828128 - 5764 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-3035D6.2 NA 0.035 70-80% Testis 3.151168777 CRC,HCC,Normal NA NA boxplot IQCB2P IQ motif containing B2 pseudogene chr6 28010723 28012355 + 1633 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=IQCB2P NA 0.012 90-100% Testis 4.2780915 CRC,Normal,PAAD NA NA boxplot ALG1L12P asparagine-linked glycosylation 1-like 12, pseudogene chr8 12421032 12425000 + 3969 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ALG1L12P NA 0.012 90-100% NA NA Breast_cancer,Normal NA NA boxplot RP11-169L17.5 NA chrX 40831844 40832562 - 719 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-169L17.5 NA 0.012 70-80% Testis 4.906892038 Breast_cancer,HCC NA NA boxplot RP11-394I13.2 NA chr2 173968351 173969418 + 1068 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-394I13.2 NA 0.012 80-90% NA NA Normal NA NA boxplot RP11-340I6.7 NA chr7 63888200 63900794 - 12595 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-340I6.7 NA 0.129 60-70% Testis 4.829753254 Breast_cancer,Normal,PAAD NA NA boxplot C3orf35 chromosome 3 open reading frame 35 chr3 37386269 37435497 + 49229 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=C3orf35 exo_circ_016024 0.741 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down),HCC(down) NA boxplot RP11-546B8.3 NA chr5 171251866 171252982 + 1117 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-546B8.3 NA 0.153 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-815J4.7 NA chr18 12067173 12068417 - 1245 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-815J4.7 NA 0.188 90-100% Testis 4.906892038 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC009110.1 NA chr16 62596372 62598449 + 2078 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC009110.1 NA 0.012 50-60% Brain 4.906892038 Normal NA NA boxplot PPP1R8P1 protein phosphatase 1 regulatory subunit 8 pseudogene 1 chr1 48325080 48326123 - 1044 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PPP1R8P1 NA 0.024 70-80% NA NA Breast_cancer,Normal NA NA boxplot LINC01116 long intergenic non-protein coding RNA 1116 chr2 176629589 176637931 - 8343 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01116 NA 0.647 10-20% NA NA CHD,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP3-460G2.2 NA chr6 140845958 140852924 - 6967 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-460G2.2 NA 0.047 40-50% NA NA HCC,PAAD NA NA boxplot RP5-827C21.6 NA chr1 234372186 234372811 + 626 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-827C21.6 NA 0.035 80-90% Brain 1.53169315 Normal NA NA boxplot ANKRD62P1 NA chr22 16671090 16679493 - 8404 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ANKRD62P1 NA 0.071 80-90% Testis 4.906892038 HCC,Normal NA NA boxplot RP11-33N14.3 NA chr12 118024817 118025518 - 702 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-33N14.3 NA 0.176 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-399J13.2 NA chr11 65118310 65119111 + 802 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-399J13.2 NA 0.035 20-30% NA NA Normal NA NA boxplot RP11-96H19.1 NA chr12 46383679 46876159 + 492481 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-96H19.1 exo_circ_045485,exo_circ_016868 0.894 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),HCC(down) NA boxplot RP4-549L20.3 NA chr1 100894928 100895356 + 429 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-549L20.3 NA 0.165 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-119F19.5 NA chr10 79681973 79684094 - 2122 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-119F19.5 NA 0.271 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot EEF1DP2 eukaryotic translation elongation factor 1 delta pseudogene 2 chr9 92836826 92837668 - 843 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=EEF1DP2 NA 0.706 20-30% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot CSPG4P12 chondroitin sulfate proteoglycan 4 pseudogene 12 chr15 85191438 85213905 + 22468 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CSPG4P12 NA 0.106 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot PHKG1P2 phosphorylase kinase, gamma 1 pseudogene 2 chr7 63509303 63510165 + 863 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PHKG1P2 NA 0.012 40-50% NA NA Breast_cancer,PAAD NA NA boxplot EIF4A2P2 eukaryotic translation initiation factor 4A2 pseudogene 2 chr10 73199826 73201225 + 1400 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=EIF4A2P2 NA 0.118 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot LINC01500 long intergenic non-protein coding RNA 1500 chr14 58828234 59017328 + 189095 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01500 NA 0.024 60-70% NA NA Breast_cancer,CRC,Normal NA NA boxplot RANP4 RAN, member RAS oncogene family pseudogene 4 chrX 136807223 136807877 - 655 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RANP4 NA 0.188 20-30% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-469N6.1 NA chr11 134735596 134763810 + 28215 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-469N6.1 NA 0.012 40-50% Testis 1.190283974 Breast_cancer,Normal NA NA boxplot RP11-119D9.1 NA chr11 67886477 67906350 + 19874 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-119D9.1 NA 0.035 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot LHFPL3-AS1 LHFPL3 antisense RNA 1 chr7 104738597 104804107 - 65511 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LHFPL3-AS1 NA 0.012 30-40% Kidney 2.719095053 Breast_cancer,Normal NA NA boxplot OGFRP1 opioid growth factor receptor pseudogene 1 chr22 42269753 42275196 + 5444 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=OGFRP1 NA 0.494 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP5-875H18.9 NA chr17 50094065 50094647 + 583 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-875H18.9 NA 0.035 90-100% NA NA Normal NA NA boxplot LINC01449 long intergenic non-protein coding RNA 1449 chr7 41101604 41133507 + 31904 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01449 NA 0.012 50-60% NA NA NA NA NA boxplot RP11-348J24.1 NA chr5 92329230 92332584 + 3355 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-348J24.1 NA 0.012 80-90% Heart 4.906892038 NA NA NA boxplot RP11-265N7.1 NA chr15 39188438 39194309 - 5872 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-265N7.1 NA 0.082 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot LINC00284 long intergenic non-protein coding RNA 284 chr13 43908669 44030461 + 121793 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00284 NA 0.129 40-50% Salivary Gland 1.957476333 CRC,HCC,Normal,PAAD NA NA boxplot SPATA13-AS1 SPATA13 antisense RNA 1 chr13 24252749 24254439 - 1691 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SPATA13-AS1 NA 0.035 40-50% NA NA CRC,HCC,Normal NA NA boxplot GGTA2P glycoprotein, alpha-galactosyltransferase 2, pseudogene chr12 67265842 67266966 - 1125 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GGTA2P NA 0.035 20-30% NA NA Breast_cancer,CRC,PAAD NA NA boxplot DBIL5P2 diazepam binding inhibitor-like 5 pseudogene 2 chr2 63117851 63119542 - 1692 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DBIL5P2 NA 0.082 70-80% NA NA CRC,Normal,PAAD NA NA boxplot RP11-351D16.3 NA chr10 43136824 43138334 - 1511 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-351D16.3 NA 0.059 70-80% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-347C12.10 NA chr16 30355441 30357104 + 1664 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-347C12.10 NA 0.647 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-710F7.3 NA chr4 106003317 106022478 - 19162 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-710F7.3 NA 0.035 10-20% NA NA CRC,Normal NA NA boxplot RP11-670E13.3 NA chr17 56884639 56884819 - 181 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-670E13.3 NA 0.035 90-100% NA NA CRC,Normal,PAAD NA NA boxplot AC133680.1 NA chr3 24687919 25174305 + 486387 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC133680.1 NA 0.106 70-80% Esophagus 2.564506773 CRC,HCC,Normal,PAAD NA NA boxplot RP11-456N14.6 NA chr3 58180009 58187495 + 7487 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-456N14.6 NA 0.059 30-40% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot RP4-669L17.8 NA chr1 491225 493241 - 2017 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-669L17.8 NA 0.282 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CTC-482H14.5 NA chr19 5178119 5178464 + 346 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-482H14.5 NA 0.012 70-80% Fallopian Tube 4.906892038 Normal NA NA boxplot SERPINA2 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 2 (gene/pseudogene) chr14 94364313 94366698 - 2386 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SERPINA2 NA 0.059 30-40% NA NA Breast_cancer,HCC,Normal NA NA boxplot AC074212.5 NA chr19 45764785 45769806 + 5022 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC074212.5 NA 0.212 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-739L10.1 NA chr18 22699481 22933764 - 234284 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-739L10.1 NA 0.188 30-40% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot TSC22D1-AS1 TSC22D1 antisense RNA 1 chr13 44575893 44580432 + 4540 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TSC22D1-AS1 NA 0.365 50-60% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot FAM86DP family with sequence similarity 86, member D, pseudogene chr3 75421552 75435110 - 13559 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FAM86DP NA 0.906 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CRC(down),HCC(down) NA boxplot OR51B3P olfactory receptor family 51 subfamily B member 3 pseudogene chr11 5314772 5315684 - 913 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=OR51B3P NA 0.012 50-60% NA NA NA NA NA boxplot RP11-148L24.1 NA chr4 174094660 174220398 - 125739 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-148L24.1 NA 0.094 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP13-753N3.3 NA chr17 30899110 30899651 + 542 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP13-753N3.3 NA 0.247 10-20% NA NA CRC,HCC,Normal,PAAD NA NA boxplot LINC01228 long intergenic non-protein coding RNA 1228 chr16 79798050 79827150 - 29101 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01228 NA 0.224 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot KYNUP2 kynureninase pseudogene 2 chr17 19082437 19084834 + 2398 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KYNUP2 NA 0.012 90-100% NA NA CRC NA NA boxplot LINC00934 long intergenic non-protein coding RNA 934 chr12 119283825 119303380 - 19556 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00934 NA 0.012 90-100% NA NA Breast_cancer,Normal NA NA boxplot CTD-3148I10.15 NA chr19 49474586 49487637 + 13052 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-3148I10.15 NA 0.906 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down) NA boxplot CFLAR-AS1 CFLAR antisense RNA 1 chr2 201140278 201157823 - 17546 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CFLAR-AS1 NA 0.329 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot UBE3AP2 ubiquitin protein ligase E3A pseudogene 2 chr21 31060600 31063168 - 2569 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=UBE3AP2 NA 0.012 90-100% Testis 3.932061537 Breast_cancer,CRC NA NA boxplot RP11-290L1.4 NA chr12 76057538 76058115 + 578 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-290L1.4 NA 0.024 90-100% NA NA HCC,Normal NA NA boxplot MIR194-2HG MIR194-2 host gene chr11 64889560 64893449 - 3890 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MIR194-2HG NA 0.082 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-420K8.1 NA chr1 39249838 39257649 - 7812 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-420K8.1 NA 0.024 40-50% Pituitary 4.906892038 Breast_cancer,HCC,Normal NA NA boxplot CKMT2-AS1 CKMT2 antisense RNA 1 chr5 81204084 81301560 - 97477 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CKMT2-AS1 NA 0.835 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down),HCC(down) NA boxplot CTD-2313J17.6 NA chr15 92808451 92809057 + 607 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2313J17.6 NA 0.071 20-30% NA NA HCC,Normal,PAAD NA NA boxplot AC005324.6 NA chr17 15735023 15749192 - 14170 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC005324.6 NA 0.012 80-90% Testis 3.473644843 Breast_cancer,HCC NA NA boxplot RP11-359G22.4 NA chr20 22685391 22746107 + 60717 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-359G22.4 NA 0.012 90-100% NA NA Breast_cancer,CRC NA NA boxplot RP11-108M9.5 NA chr1 16889095 16889602 + 508 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-108M9.5 NA 0.035 20-30% NA NA Breast_cancer,Normal NA NA boxplot RP11-370B11.3 NA chr9 22767175 22768316 + 1142 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-370B11.3 NA 0.012 80-90% NA NA NA NA NA boxplot RP11-90K17.2 NA chr11 85916502 85923682 - 7181 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-90K17.2 NA 0.035 80-90% Testis 4.906892038 CRC,PAAD NA NA boxplot RBM5-AS1 RBM5 antisense RNA 1 chr3 50099603 50100988 - 1386 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RBM5-AS1 NA 0.259 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-196G11.3 NA chr16 31093727 31095944 + 2218 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-196G11.3 NA 0.118 70-80% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot AC005754.8 NA chr5 141118680 141120765 + 2086 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC005754.8 NA 0.012 90-100% NA NA NA NA NA boxplot EIF4HP2 eukaryotic translation initiation factor 4H pseudogene 2 chr22 30902219 30902781 + 563 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=EIF4HP2 NA 0.129 20-30% NA NA Breast_cancer,CRC,Normal,PAAD NA NA boxplot RP11-47J17.3 NA chr11 12822435 12823667 - 1233 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-47J17.3 NA 0.024 70-80% Cervix 4.906892038 Breast_cancer,PAAD NA NA boxplot DNAJC3-AS1 DNAJC3 antisense RNA 1 (head to head) chr13 95648733 95676925 - 28193 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DNAJC3-AS1 NA 0.718 10-20% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot C2orf27AP3 chromosome 2 open reading frame 27A pseudogene 3 chr9 40121962 40122540 + 579 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=C2orf27AP3 NA 0.012 10-20% NA NA CHD NA NA boxplot RPL5P14 ribosomal protein L5 pseudogene 14 chr5 31847271 31848148 + 878 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL5P14 NA 0.094 30-40% Testis 3.606779508 HCC,Normal,PAAD NA NA boxplot TUBAP2 tubulin alpha pseudogene 2 chr11 90282560 90284172 + 1613 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TUBAP2 NA 0.976 30-40% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-51J9.6 NA chr8 30197404 30198048 + 645 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-51J9.6 NA 0.153 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP1-128O3.6 NA chr6 108318079 108318404 + 326 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-128O3.6 NA 0.129 70-80% Testis 3.320998341 CRC,HCC,Normal,PAAD NA NA boxplot RP11-534L6.5 NA chr10 48624004 48625093 - 1090 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-534L6.5 NA 0.035 70-80% Testis 4.906892038 CRC NA NA boxplot RP11-169F17.1 NA chr18 73151241 73264480 - 113240 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-169F17.1 exo_circ_011413 0.047 30-40% Testis 4.309634029 Breast_cancer,HCC,Normal,PAAD NA NA boxplot CH17-360D5.3 NA chr10 47970043 47973496 - 3454 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CH17-360D5.3 NA 0.035 0-10% NA NA PAAD PAAD(up) NA boxplot RP11-423F24.3 NA chr1 231021611 231022183 + 573 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-423F24.3 NA 0.835 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot RP11-123B3.2 NA chr10 49419277 49472903 + 53627 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-123B3.2 NA 0.012 80-90% NA NA Normal NA NA boxplot RP11-52L5.6 NA chr13 78596129 78599619 + 3491 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-52L5.6 NA 0.012 80-90% Testis 4.872022771 Breast_cancer,PAAD NA NA boxplot CH507-145C22.4 NA chr21 6994374 6997737 - 3364 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CH507-145C22.4 NA 0.153 60-70% NA NA CRC,HCC,PAAD NA NA boxplot RP11-10L12.1 NA chr4 102734358 102734612 + 255 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-10L12.1 NA 0.118 30-40% NA NA Breast_cancer,Normal NA NA boxplot PRR31 proline rich 31 chr9 136969243 136971990 + 2748 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PRR31 NA 0.024 10-20% NA NA Breast_cancer,CHD,CRC NA NA boxplot RP11-15I11.3 NA chr1 212225278 212238977 - 13700 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-15I11.3 NA 0.106 20-30% NA NA HCC,Normal,PAAD NA NA boxplot UBE2Q2P2 ubiquitin conjugating enzyme E2Q family member 2 pseudogene 2 chr15 82355142 82420075 + 64934 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=UBE2Q2P2 NA 0.906 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down),PAAD(up) NA boxplot BX255923.3 NA chr9 41100794 41106229 - 5436 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=BX255923.3 NA 0.012 10-20% Testis 4.55694061 PAAD NA NA boxplot RP4-799P18.5 NA chr1 234284972 234285541 + 570 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-799P18.5 NA 0.024 20-30% Brain 4.906892038 PAAD NA NA boxplot RP11-448P19.1 NA chr11 133783671 133810376 - 26706 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-448P19.1 NA 0.024 50-60% Testis 4.018897262 Breast_cancer,CRC,HCC NA NA boxplot RP4-633I8.4 NA chr1 8805860 8807051 - 1192 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-633I8.4 exo_circ_021535 0.106 70-80% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CTC-457L16.2 NA chr17 19141017 19143689 - 2673 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-457L16.2 NA 0.012 90-100% NA NA Breast_cancer,PAAD NA NA boxplot CTD-2105E13.16 NA chr19 55338945 55339283 - 339 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2105E13.16 NA 0.012 90-100% NA NA HCC NA NA boxplot CTD-2231E14.8 NA chr19 16123661 16139892 - 16232 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2231E14.8 NA 0.812 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot FBXO36-IT1 FBXO36 intronic transcript 1 chr2 229942728 229945137 + 2410 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FBXO36-IT1 NA 0.024 70-80% Testis 4.906892038 Breast_cancer,CRC NA NA boxplot RP11-732A19.9 NA chr11 6618790 6619764 + 975 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-732A19.9 NA 0.282 70-80% Testis 3.99984253 CRC,HCC,Normal,PAAD NA NA boxplot RP11-7K24.3 NA chr6 42092233 42094259 - 2027 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-7K24.3 NA 0.035 40-50% NA NA Breast_cancer,HCC,Normal NA NA boxplot CTC-207P7.1 NA chr5 164119098 164234097 - 115000 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-207P7.1 NA 0.012 40-50% NA NA PAAD NA NA boxplot RP11-1148L6.8 NA chrX 48580741 48581165 + 425 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1148L6.8 NA 0.329 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CTD-2588C8.8 NA chr19 34426112 34428273 - 2162 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2588C8.8 NA 0.012 90-100% Testis 4.215834473 HCC NA NA boxplot RP3-366N23.4 NA chr6 167347472 167348053 + 582 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-366N23.4 NA 0.012 50-60% Testis 3.095011139 Breast_cancer,Normal NA NA boxplot RFPL1S RFPL1 antisense RNA 1 chr22 29436534 29478175 - 41642 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RFPL1S NA 0.459 20-30% Brain 2.311072091 CHD,CRC,HCC,Normal,PAAD NA NA boxplot LL22NC03-80A10.6 NA chr22 22303224 22310401 + 7178 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LL22NC03-80A10.6 NA 0.929 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),HCC(down) NA boxplot AF131215.8 NA chr8 11202965 11203671 + 707 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AF131215.8 NA 0.024 40-50% NA NA HCC,Normal NA NA boxplot CTB-186H2.3 NA chr17 35983656 35990270 + 6615 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTB-186H2.3 NA 0.871 10-20% Testis 3.121754902 Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(up) NA boxplot RP5-881L22.6 NA chr20 44389624 44391537 - 1914 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-881L22.6 NA 0.035 80-90% NA NA CRC,Normal NA NA boxplot AC108051.3 NA chr2 103011779 103019898 + 8120 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC108051.3 NA 0.035 60-70% Testis 4.906892038 HCC,PAAD NA NA boxplot CTD-2334D19.1 NA chr5 120781218 120790778 + 9561 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2334D19.1 exo_circ_010109 0.047 80-90% NA NA CRC,HCC,Normal NA NA boxplot RP11-5A11.1 NA chr8 103559099 103559389 - 291 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-5A11.1 NA 0.012 10-20% Brain 4.906892038 PAAD NA NA boxplot CEACAMP5 carcinoembryonic antigen-related cell adhesion molecule pseudogene 5 chr19 42654200 42669076 + 14877 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CEACAMP5 NA 0.024 50-60% NA NA Breast_cancer,PAAD NA NA boxplot CICP14 capicua transcriptional repressor pseudogene 14 chr7 128655962 128658791 - 2830 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CICP14 NA 0.224 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-483P21.2 NA chr16 83789967 83807834 - 17868 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-483P21.2 NA 0.647 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RPL7AP34 ribosomal protein L7a pseudogene 34 chr6 63548708 63549508 - 801 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL7AP34 NA 0.024 80-90% Liver 4.553546503 CHD NA NA boxplot RP11-128N14.4 NA chr13 97437268 97437630 + 363 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-128N14.4 NA 0.082 50-60% NA NA CRC,HCC,Normal NA NA boxplot RP11-173A6.2 NA chr1 244694432 244694720 - 289 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-173A6.2 NA 0.024 10-20% NA NA Normal,PAAD NA NA boxplot DNM1P38 dynamin 1 pseudogene 38 chr15 82531653 82534139 - 2487 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DNM1P38 NA 0.012 90-100% NA NA CRC NA NA boxplot RP11-382B18.1 NA chr15 30344307 30348236 - 3930 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-382B18.1 NA 0.047 40-50% NA NA Breast_cancer,Normal,PAAD NA NA boxplot STAG3L5P-PVRIG2P-PILRB STAG3L5P-PVRIG2P-PILRB readthrough chr7 100336104 100367831 + 31728 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=STAG3L5P-PVRIG2P-PILRB NA 0.976 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD PAAD(up) NA boxplot LINC00982 long intergenic non-protein coding RNA 982 chr1 3059615 3068437 - 8823 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00982 NA 0.247 30-40% Stomach 1.780090709 Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-432I5.2 NA chr16 71623708 71626816 - 3109 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-432I5.2 NA 0.012 90-100% Small Intestine 1.168554182 CRC NA NA boxplot PKD1P5 polycystic kidney disease 1 (autosomal dominant) pseudogene 5 chr16 18374521 18401940 - 27420 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PKD1P5 NA 1 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up),CRC(up),HCC(up),PAAD(up) NA boxplot LA16c-390E6.3 NA chr16 1467673 1472684 - 5012 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LA16c-390E6.3 NA 0.012 30-40% NA NA CRC,PAAD NA NA boxplot MTND5P24 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 5 pseudogene 24 chr2 143094789 143096555 - 1767 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MTND5P24 NA 0.012 70-80% NA NA Normal NA NA boxplot PSPC1P1 paraspeckle component 1 pseudogene 1 chr13 19201637 19227432 - 25796 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PSPC1P1 NA 0.388 50-60% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP3-365O12.2 NA chr6 46903471 46909078 + 5608 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-365O12.2 NA 0.012 80-90% Testis 3.007990422 CRC,Normal NA NA boxplot LINC01412 long intergenic non-protein coding RNA 1412 chr2 144566435 144579434 + 13000 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01412 NA 0.071 80-90% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-1113L8.1 NA chr17 19560111 19597922 - 37812 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1113L8.1 NA 0.035 50-60% Adrenal Gland 1.268886221 HCC NA NA boxplot COPS8P2 COP9 signalosome subunit 8 pseudogene 2 chr3 68145004 68145630 + 627 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=COPS8P2 exo_circ_054364 0.576 40-50% Muscle 3.766797592 CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-332H14.2 NA chr2 105334027 105337475 - 3449 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-332H14.2 NA 0.318 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-1084I9.2 NA chr15 26050538 26052276 - 1739 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1084I9.2 NA 0.012 70-80% NA NA Breast_cancer,HCC NA NA boxplot RP11-312A15.2 NA chr4 157945817 157946642 - 826 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-312A15.2 exo_circ_003781,exo_circ_038690 0.012 90-100% NA NA CRC NA NA boxplot RP11-452D12.1 NA chr14 52286797 52289268 + 2472 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-452D12.1 NA 0.188 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot NDUFAB1P1 NADH:ubiquinone oxidoreductase subunit AB1 pseudogene 1 chr6 70734503 70734962 + 460 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NDUFAB1P1 NA 0.059 70-80% NA NA CRC,Normal NA NA boxplot AC121251.1 NA chr3 23389661 23389909 - 249 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC121251.1 NA 0.035 60-70% Spleen 3.908430972 Breast_cancer,CRC,HCC NA NA boxplot RP11-298P3.4 NA chr13 32425358 32432954 - 7597 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-298P3.4 NA 0.576 10-20% NA NA CRC,HCC,Normal,PAAD CRC(up) NA boxplot GNAQP1 guanine nucleotide binding protein (G protein), q polypeptide pseudogene 1 chr2 131423801 131424867 - 1067 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GNAQP1 NA 0.659 70-80% Testis 1.273841408 Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot BRI3P1 brain protein I3 pseudogene 1 chr1 100213293 100213670 + 378 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=BRI3P1 NA 0.012 20-30% NA NA Breast_cancer,CHD,Normal NA NA boxplot RP11-145A3.2 NA chr1 225710968 225736274 - 25307 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-145A3.2 NA 0.024 50-60% NA NA CRC,Normal NA NA boxplot CTD-2506J14.1 NA chr14 97458816 97581601 + 122786 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2506J14.1 NA 0.529 20-30% Testis 2.508726393 Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),HCC(down),PAAD(down) NA boxplot RP11-420K14.2 NA chr19 21677550 21678221 - 672 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-420K14.2 NA 0.506 0-10% Pancreas 1.714945486 CRC,HCC,Normal,PAAD CHD(down),HCC(up),PAAD(down) NA boxplot CTD-3110H11.1 NA chr15 50359450 50360194 - 745 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-3110H11.1 NA 0.012 90-100% NA NA HCC NA NA boxplot AC093159.1 NA chr2 62463127 62464070 + 944 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC093159.1 NA 0.271 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC004160.4 NA chr7 11406955 11414078 + 7124 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC004160.4 NA 0.059 70-80% NA NA CRC,Normal,PAAD NA NA boxplot RP11-104E19.1 NA chr14 24595723 24657774 + 62052 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-104E19.1 NA 0.047 10-20% Testis 4.324325928 Breast_cancer,CRC,Normal NA NA boxplot CTB-129O4.1 NA chr5 180293245 180295253 + 2009 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTB-129O4.1 NA 0.071 80-90% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-447H19.1 NA chr5 43231812 43233173 - 1362 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-447H19.1 NA 0.012 90-100% NA NA Breast_cancer NA NA boxplot RP11-848P1.5 NA chr17 31090787 31095450 - 4664 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-848P1.5 NA 0.059 60-70% NA NA HCC,Normal,PAAD NA NA boxplot CTC-436P18.5 NA chr5 61145846 61146376 - 531 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-436P18.5 NA 0.082 30-40% NA NA CRC,Normal,PAAD NA NA boxplot RP11-469N6.3 NA chr11 134671426 134672024 - 599 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-469N6.3 NA 0.024 10-20% NA NA Breast_cancer,PAAD NA NA boxplot AE000661.50 NA chr14 22417836 22418657 + 822 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AE000661.50 NA 0.047 60-70% NA NA Normal NA NA boxplot LINC00852 long intergenic non-protein coding RNA 852 chr3 10284419 10285746 + 1328 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00852 NA 0.494 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot MUC2 mucin 2, oligomeric mucus/gel-forming chr11 1074875 1110511 + 35637 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MUC2 NA 0.082 30-40% Small Intestine 4.101565809 Breast_cancer,CRC,HCC,PAAD NA NA boxplot RP11-395I14.2 NA chr8 25425521 25426580 - 1060 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-395I14.2 NA 0.059 40-50% NA NA CRC,Normal,PAAD NA NA boxplot RP11-388M20.2 NA chr16 31131433 31131877 + 445 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-388M20.2 NA 0.059 80-90% NA NA CRC,HCC,Normal NA NA boxplot FAM182A family with sequence similarity 182 member A chr20 26054655 26086917 + 32263 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FAM182A NA 0.082 90-100% Testis 1.425675438 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP13-554M15.7 NA chr12 132550729 132554947 + 4219 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP13-554M15.7 NA 0.412 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP4-609E1.2 NA chr1 68043330 68044233 + 904 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-609E1.2 NA 0.024 70-80% Testis 4.212933028 PAAD NA NA boxplot RP11-282O18.3 NA chr12 123252030 123261483 - 9454 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-282O18.3 exo_circ_009162,exo_circ_010867 0.8 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),PAAD(up) NA boxplot RP11-661A12.12 NA chr8 143632071 143633756 - 1686 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-661A12.12 NA 0.106 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-467L19.6 NA chr15 20545576 20549444 - 3869 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-467L19.6 NA 0.012 20-30% Testis 4.906892038 PAAD NA NA boxplot RPL12P37 ribosomal protein L12 pseudogene 37 chr17 80976454 80976948 + 495 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL12P37 NA 0.012 80-90% Testis 4.464190802 NA NA NA boxplot RP11-388M20.6 NA chr16 31182511 31183285 - 775 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-388M20.6 NA 0.306 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot DNM1P50 dynamin 1 pseudogene 50 chr15 30567822 30571089 - 3268 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DNM1P50 NA 0.035 50-60% Testis 3.262539474 CRC,HCC,Normal,PAAD NA NA boxplot RP11-766H1.1 NA chr17 73067870 73068288 - 419 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-766H1.1 NA 0.906 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down) NA boxplot GEMIN8P4 gem nuclear organelle associated protein 8 pseudogene 4 chr1 89993593 89994321 - 729 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GEMIN8P4 NA 0.129 50-60% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot AC073410.1 NA chr2 202520401 202520989 + 589 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC073410.1 NA 0.047 70-80% NA NA Normal,PAAD NA NA boxplot RP11-477N12.5 NA chr17 9805443 9811047 + 5605 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-477N12.5 NA 0.012 70-80% NA NA Breast_cancer NA NA boxplot ESPNP espin pseudogene chr1 16687339 16720157 - 32819 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ESPNP NA 0.094 80-90% Testis 1.888445779 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-506O24.1 NA chr1 164769116 164774641 - 5526 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-506O24.1 exo_circ_009469,exo_circ_013570,exo_circ_053056,exo_circ_040855,exo_circ_032480,exo_circ_048099,exo_circ_001687,exo_circ_053057,exo_circ_043076,exo_circ_037925,exo_circ_048100,exo_circ_025595,exo_circ_036116,exo_circ_003080,exo_circ_032482,exo_circ_006384,exo_circ_025152,exo_circ_053058 0.047 40-50% NA NA HCC,Normal,PAAD NA NA boxplot RP11-278H7.4 NA chr1 244068820 244093026 - 24207 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-278H7.4 NA 0.012 40-50% Small Intestine 4.906892038 Normal NA NA boxplot RP5-1011O1.3 NA chr1 192529579 192538102 + 8524 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-1011O1.3 NA 0.012 40-50% NA NA Normal NA NA boxplot RP11-756D7.1 NA chr11 11759101 11759433 - 333 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-756D7.1 NA 0.012 90-100% NA NA NA NA NA boxplot AC012485.2 NA chr2 238295392 238300620 - 5229 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC012485.2 NA 0.012 70-80% NA NA Breast_cancer,PAAD NA NA boxplot AC000041.8 NA chr22 29419155 29423193 - 4039 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC000041.8 NA 0.282 90-100% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-90B9.3 NA chr15 83020115 83020802 + 688 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-90B9.3 NA 0.071 60-70% NA NA HCC,Normal,PAAD NA NA boxplot RP11-181G12.4 NA chr1 2212523 2220738 + 8216 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-181G12.4 NA 0.059 80-90% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot RPS6P25 ribosomal protein S6 pseudogene 25 chr19 12894133 12894880 + 748 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPS6P25 NA 0.365 60-70% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-381E24.1 NA chr3 108543367 108543875 - 509 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-381E24.1 NA 0.224 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot BANF1P1 barrier to autointegration factor 1 pseudogene 1 chr14 68936602 68936864 + 263 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=BANF1P1 NA 0.012 10-20% NA NA PAAD NA NA boxplot CTC-412M14.6 NA chr19 19699203 19699409 - 207 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-412M14.6 NA 0.012 10-20% NA NA PAAD NA NA boxplot LINC01271 long intergenic non-protein coding RNA 1271 chr20 50310711 50321342 - 10632 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01271 NA 0.047 60-70% NA NA Breast_cancer,Normal,PAAD NA NA boxplot CTD-2540L5.6 NA chr14 70608798 70641298 - 32501 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2540L5.6 NA 0.118 30-40% Spleen 1.531120628 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CTD-2179L22.1 NA chr5 78041879 78044138 - 2260 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2179L22.1 NA 0.259 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot H3F3AP4 H3 histone, family 3A, pseudogene 4 chr2 174719908 174720318 + 411 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=H3F3AP4 NA 1 0-10% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot AC022154.7 NA chr19 48619272 48624132 - 4861 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC022154.7 NA 0.188 80-90% NA NA CRC,HCC,Normal,PAAD NA NA boxplot AC084121.17 NA chr8 7793716 7795870 - 2155 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC084121.17 NA 0.012 90-100% Testis 4.867602493 Breast_cancer,PAAD NA NA boxplot RP3-495K2.2 NA chr6 169034197 169035642 - 1446 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-495K2.2 NA 0.012 20-30% NA NA Breast_cancer,Normal NA NA boxplot AC092652.1 NA chr2 143640756 143656179 - 15424 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC092652.1 NA 0.012 30-40% Testis 1.877095835 HCC NA NA boxplot RP11-164P12.3 NA chr4 151674483 151677893 + 3411 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-164P12.3 NA 0.047 40-50% NA NA CRC,HCC,PAAD NA NA boxplot AC024560.2 NA chr3 197660565 197665757 - 5193 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC024560.2 NA 0.012 90-100% NA NA Breast_cancer,CRC NA NA boxplot RP11-736N17.8 NA chr14 103094723 103098885 + 4163 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-736N17.8 NA 0.012 90-100% NA NA Breast_cancer,HCC NA NA boxplot EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 chr9 133019486 133020874 + 1389 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=EEF1A1P5 NA 1 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot FAM3D-AS1 NA chr3 58607080 58634440 + 27361 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FAM3D-AS1 NA 0.035 40-50% NA NA Breast_cancer,CRC,HCC NA NA boxplot CTA-243E7.4 NA chr22 25009685 25015072 - 5388 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTA-243E7.4 NA 0.024 80-90% NA NA Breast_cancer,HCC NA NA boxplot RPL21P28 ribosomal protein L21 pseudogene 28 chr1 212051524 212052006 - 483 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL21P28 NA 1 0-10% NA NA CHD,CRC,HCC,Normal,PAAD CHD(up) NA boxplot RP11-415I12.2 NA chr12 63682523 63724935 - 42413 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-415I12.2 NA 0.024 60-70% NA NA HCC NA NA boxplot RP11-552F3.9 NA chr17 75876372 75879546 + 3175 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-552F3.9 NA 0.188 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-20I23.5 NA chr16 2575628 2577373 - 1746 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-20I23.5 NA 0.024 70-80% NA NA Breast_cancer,Normal,PAAD NA NA boxplot RP11-539L10.3 NA chr4 6670725 6673830 - 3106 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-539L10.3 NA 0.576 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-755F10.3 NA chr11 66259567 66261834 - 2268 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-755F10.3 NA 0.094 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-404P21.9 NA chr14 96223108 96223347 + 240 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-404P21.9 NA 0.024 70-80% NA NA Breast_cancer,CRC,HCC NA NA boxplot RP13-131K19.2 NA chr3 48985049 48989988 - 4940 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP13-131K19.2 NA 0.365 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot FABP7P1 fatty acid binding protein 7, brain pseudogene 1 chr1 243624666 243625056 - 391 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FABP7P1 NA 0.035 40-50% NA NA CRC,PAAD NA NA boxplot GS1-251I9.2 NA chr8 91042690 91044762 - 2073 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GS1-251I9.2 NA 0.024 30-40% Testis 4.906892038 Normal,PAAD NA NA boxplot SF3A3P2 splicing factor 3a, subunit 3 pseudogene 2 chr11 123597946 123599452 - 1507 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SF3A3P2 NA 0.141 90-100% NA NA CRC,HCC,Normal,PAAD NA NA boxplot SCDP1 stearoyl-CoA desaturase (delta-9-desaturase) pseudogene 1 chr17 20784645 20785725 + 1081 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SCDP1 NA 0.012 90-100% Testis 4.906892038 Breast_cancer NA NA boxplot RP3-340B19.5 NA chr6 35607628 35607934 + 307 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-340B19.5 NA 0.012 90-100% NA NA Normal NA NA boxplot LINC01216 long intergenic non-protein coding RNA 1216 chr4 100660279 100675113 - 14835 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01216 NA 0.035 40-50% NA NA Normal,PAAD NA NA boxplot RP11-319G6.3 NA chr3 139466430 139466795 + 366 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-319G6.3 exo_circ_054094 0.024 70-80% NA NA HCC,Normal NA NA boxplot RP4-800O15.3 NA chr12 125900421 125901483 - 1063 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-800O15.3 NA 0.012 0-10% NA NA Breast_cancer,PAAD NA NA boxplot RP5-837M10.4 NA chr1 100462399 100485997 - 23599 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-837M10.4 NA 0.094 70-80% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RBM22P12 RNA binding motif protein 22 pseudogene 12 chr16 31680847 31682101 + 1255 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RBM22P12 NA 0.012 80-90% NA NA PAAD NA NA boxplot RP1-145M24.1 NA chr11 34335118 34336003 - 886 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-145M24.1 NA 0.047 10-20% NA NA Breast_cancer,CRC,PAAD NA NA boxplot CTD-2639E6.9 NA chr19 48963975 48965158 + 1184 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2639E6.9 NA 0.306 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot COX6CP1 cytochrome c oxidase subunit VIc pseudogene 1 chr16 11903923 11904137 - 215 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=COX6CP1 NA 0.094 50-60% NA NA CRC,Normal,PAAD NA NA boxplot PIGCP1 phosphatidylinositol glycan anchor biosynthesis class C pseudogene 1 chr11 33075566 33076460 - 895 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PIGCP1 NA 0.2 0-10% NA NA HCC,Normal CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot RP11-159F24.6 NA chr5 43511058 43521811 + 10754 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-159F24.6 NA 0.047 70-80% NA NA Breast_cancer,CRC NA NA boxplot RP11-83A24.2 NA chr4 139411927 139454034 - 42108 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-83A24.2 NA 0.835 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(up) NA boxplot XXbac-B476C20.10 NA chr22 18101612 18101888 + 277 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=XXbac-B476C20.10 NA 0.059 80-90% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-477I4.4 NA chr14 104815449 104815753 - 305 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-477I4.4 NA 0.118 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-484O2.1 NA chr4 15358141 15420032 - 61892 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-484O2.1 exo_circ_054514,exo_circ_014101 0.224 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot TUBB8P11 tubulin beta 8 class VIII pseudogene 11 chr1 873292 874349 + 1058 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TUBB8P11 NA 0.012 90-100% NA NA Breast_cancer,HCC NA NA boxplot CTD-2506P8.6 NA chr14 81221218 81222460 + 1243 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2506P8.6 NA 0.235 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-672A2.3 NA chr11 76675079 76703195 + 28117 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-672A2.3 NA 0.518 30-40% Spleen 3.684705608 CRC,HCC,Normal,PAAD NA NA boxplot RP5-839B4.8 NA chr20 9986088 10007116 + 21029 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-839B4.8 NA 0.012 40-50% NA NA PAAD NA NA boxplot RP1-266L20.9 NA chr6 169770413 169772042 + 1630 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-266L20.9 NA 0.153 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot YTHDF2P1 YTH domain family member 2 pseudogene 1 chr14 39215065 39216335 + 1271 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=YTHDF2P1 NA 0.482 60-70% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot DLEU7-AS1 DLEU7 antisense RNA 1 chr13 50807856 50849905 + 42050 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DLEU7-AS1 NA 0.212 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-75L1.2 NA chr12 9695384 9696227 + 844 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-75L1.2 NA 0.929 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down),HCC(down) NA boxplot RP11-456J20.1 NA chr15 31765743 31768201 - 2459 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-456J20.1 NA 0.035 20-30% Testis 3.386920684 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot GTF2IP1 general transcription factor IIi pseudogene 1 chr7 75185385 75237696 - 52312 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GTF2IP1 NA 1 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up),CRC(up),HCC(up),PAAD(up) NA boxplot BMS1P20 BMS1, ribosome biogenesis factor pseudogene 20 chr22 22303224 22322847 + 19624 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=BMS1P20 NA 0.965 0-10% NA NA CHD,CRC,HCC,Normal,PAAD CHD(down) NA boxplot AC000089.3 NA chr22 19792294 19793094 + 801 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC000089.3 NA 0.624 80-90% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-9N20.3 NA chr3 123715851 123716399 + 549 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-9N20.3 NA 0.424 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-65D24.2 NA chr13 111588201 111672608 + 84408 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-65D24.2 NA 0.024 70-80% Testis 4.906892038 PAAD NA NA boxplot AC005540.3 NA chr2 190880797 190882059 - 1263 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC005540.3 NA 0.894 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down) NA boxplot RP11-803B1.3 NA chr3 75395404 75395536 - 133 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-803B1.3 NA 0.035 10-20% NA NA Breast_cancer,CRC,Normal NA NA boxplot TNRC18P2 trinucleotide repeat containing 18 pseudogene 2 chr7 63567743 63585075 - 17333 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TNRC18P2 NA 0.012 10-20% Testis 4.628663342 Breast_cancer,PAAD NA NA boxplot LMO7-AS1 LMO7 antisense RNA 1 chr13 75604700 75635994 - 31295 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LMO7-AS1 NA 0.259 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-276E17.2 NA chr1 166475772 166490039 - 14268 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-276E17.2 NA 0.129 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-701H24.4 NA chr15 25087661 25088896 + 1236 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-701H24.4 NA 0.271 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot MCTS2P malignant T-cell amplified sequence 2, pseudogene chr20 31547504 31548049 + 546 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MCTS2P exo_circ_005656 0.353 30-40% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP5-1136G13.2 NA chr7 148696467 148698664 - 2198 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-1136G13.2 exo_circ_015165,exo_circ_042402 0.659 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CTA-221G9.12 NA chr22 25102433 25112692 - 10260 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTA-221G9.12 NA 0.306 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot PRELID3BP4 PRELI domain containing 3B pseudogene 4 chr5 42897262 42897832 - 571 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PRELID3BP4 NA 0.024 60-70% NA NA HCC NA NA boxplot ZNF503-AS1 ZNF503 antisense RNA 1 chr10 75269819 75373500 + 103682 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ZNF503-AS1 NA 0.459 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD HCC(up) NA boxplot HMGN2P7 high mobility group nucleosomal binding domain 2 pseudogene 7 chr3 15375373 15375645 - 273 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HMGN2P7 NA 0.141 90-100% Brain 4.906892038 Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot EBAG9P1 estrogen receptor binding site associated, antigen, 9 pseudogene 1 chr10 99697407 99697949 - 543 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=EBAG9P1 NA 0.035 20-30% NA NA CRC,HCC,Normal NA NA boxplot NPM1P49 nucleophosmin 1 (nucleolar phosphoprotein B23, numatrin) pseudogene 49 chrX 47438736 47439774 - 1039 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NPM1P49 NA 0.024 90-100% Brain 4.906892038 CRC,Normal NA NA boxplot FOLH1B folate hydrolase 1B chr11 89639227 89698718 + 59492 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FOLH1B NA 0.047 10-20% NA NA HCC,Normal NA NA boxplot RP11-472N13.2 NA chr10 31604600 31606218 + 1619 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-472N13.2 NA 0.012 70-80% NA NA Normal NA NA boxplot RP11-41L14.1 NA chrX 129041536 129043183 - 1648 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-41L14.1 NA 0.012 70-80% Bladder 4.906892038 Breast_cancer,HCC NA NA boxplot RP11-65J3.3 NA chr9 129430652 129451422 - 20771 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-65J3.3 NA 0.012 10-20% NA NA Breast_cancer,PAAD NA NA boxplot RP5-1116H23.4 NA chr20 5061037 5061340 - 304 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-1116H23.4 NA 0.035 70-80% NA NA CRC NA NA boxplot RP5-1074L1.4 NA chr1 110370154 110373003 + 2850 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-1074L1.4 NA 0.212 0-10% NA NA CRC,HCC,Normal,PAAD PAAD(up) NA boxplot CH507-42P11.3 NA chr21 6034690 6036093 + 1404 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CH507-42P11.3 NA 0.024 90-100% NA NA HCC NA NA boxplot RP11-888D10.3 NA chr18 9315194 9334441 - 19248 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-888D10.3 NA 0.694 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),HCC(down) NA boxplot AC006960.5 NA chr7 36305631 36305904 + 274 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC006960.5 NA 0.012 80-90% NA NA CRC NA NA boxplot CTD-2514K5.4 NA chr17 74256896 74262020 - 5125 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2514K5.4 NA 0.012 70-80% NA NA Normal NA NA boxplot BCAR1P2 breast cancer anti-estrogen resistance 1 pseudogene 2 chr15 21080812 21081447 - 636 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=BCAR1P2 NA 0.012 80-90% NA NA Breast_cancer,PAAD NA NA boxplot RP11-566K19.8 NA chr15 22371736 22373570 + 1835 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-566K19.8 NA 0.259 70-80% NA NA CRC,HCC,Normal,PAAD NA NA boxplot LL0XNC01-39B3.1 NA chrX 21939461 21940160 + 700 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LL0XNC01-39B3.1 NA 0.024 60-70% NA NA PAAD NA NA boxplot AC016629.3 NA chr19 58593896 58599355 - 5460 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC016629.3 NA 0.341 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP1-232L24.3 NA chr6 79420297 79421305 + 1009 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-232L24.3 NA 0.047 80-90% Brain 3.31627058 HCC,Normal NA NA boxplot RP11-536C5.7 NA chr1 160202199 160208869 - 6671 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-536C5.7 NA 0.247 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AF186192.5 NA chr8 144700353 144708517 + 8165 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AF186192.5 NA 0.188 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-432I5.8 NA chr16 71723180 71724230 + 1051 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-432I5.8 NA 0.106 70-80% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-67L2.2 NA chr3 122886941 122892416 + 5476 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-67L2.2 NA 0.624 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),HCC(down),PAAD(up) NA boxplot TMSB4XP4 thymosin beta 4, X-linked pseudogene 4 chr9 128342153 128342770 + 618 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TMSB4XP4 NA 1 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up) NA boxplot RPL12P42 ribosomal protein L12 pseudogene 42 chr19 13157959 13158788 - 830 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL12P42 NA 0.341 70-80% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot KC6 keratoconus gene 6 chr18 41465783 41632185 - 166403 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KC6 exo_circ_017301 0.047 30-40% NA NA Breast_cancer,HCC,PAAD NA NA boxplot RP5-933K21.2 NA chr6 157365990 157366923 - 934 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-933K21.2 NA 0.012 80-90% NA NA Breast_cancer,CRC NA NA boxplot LINC01620 long intergenic non-protein coding RNA 1620 chr20 44436172 44465349 - 29178 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01620 NA 0.035 60-70% NA NA CRC,HCC,Normal NA NA boxplot CTC-448F2.4 NA chr19 30028741 30029916 - 1176 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-448F2.4 NA 0.035 0-10% NA NA Normal NA NA boxplot LINC01088 long intergenic non-protein coding RNA 1088 chr4 78971748 79308798 + 337051 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01088 exo_circ_044100 0.882 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down),HCC(down) NA boxplot LINC00489 long intergenic non-protein coding RNA 489 chr20 37619298 37623119 - 3822 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00489 NA 0.012 10-20% Testis 4.906892038 Normal NA NA boxplot RP11-744D14.1 NA chr16 64260570 64261239 - 670 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-744D14.1 NA 0.247 50-60% NA NA HCC,Normal,PAAD NA NA boxplot OR5BJ1P olfactory receptor family 5 subfamily BJ member 1 pseudogene chr12 48394510 48395392 - 883 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=OR5BJ1P NA 0.012 90-100% NA NA NA NA NA boxplot LINC01447 long intergenic non-protein coding RNA 1447 chr7 47621939 47629893 + 7955 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01447 NA 0.224 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CTA-992D9.8 NA chr22 27102766 27107019 + 4254 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTA-992D9.8 NA 0.012 60-70% NA NA Breast_cancer,PAAD NA NA boxplot RP11-84C13.2 NA chr4 89119284 89119871 + 588 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-84C13.2 NA 0.071 70-80% NA NA CRC,HCC,Normal NA NA boxplot FKBP4P1 FK506 binding protein 4 pseudogene 1 chr4 118193405 118194751 - 1347 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FKBP4P1 NA 0.012 90-100% Testis 4.800619413 Breast_cancer NA NA boxplot AF038458.3 NA chr19 35947115 35959192 + 12078 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AF038458.3 NA 0.012 70-80% Testis 2.907113208 HCC NA NA boxplot SOCS5P5 suppressor of cytokine signaling 5 pseudogene 5 chr6 113222166 113224072 + 1907 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SOCS5P5 NA 0.012 40-50% Testis 4.906892038 HCC NA NA boxplot AC104451.2 NA chr3 17706058 17706233 - 176 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC104451.2 NA 0.047 90-100% Testis 4.906892038 Breast_cancer,CRC NA NA boxplot COX20P1 COX20 cytochrome c oxidase assembly factor pseudogene 1 chr10 68632371 68632727 + 357 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=COX20P1 NA 0.788 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down) NA boxplot ETF1P1 eukaryotic translation termination factor 1 pseudogene 1 chr6 30031713 30033003 + 1291 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ETF1P1 NA 0.012 10-20% NA NA Normal NA NA boxplot RP11-717D12.1 NA chr3 47601715 47604677 - 2963 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-717D12.1 NA 0.071 40-50% NA NA Breast_cancer,CRC,Normal NA NA boxplot AE000662.93 NA chr14 22556311 22557062 - 752 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AE000662.93 NA 0.035 60-70% Testis 2.56244083 Breast_cancer,HCC,PAAD NA NA boxplot RP11-632L2.2 NA chr13 93226612 93227317 - 706 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-632L2.2 NA 0.047 50-60% NA NA HCC,Normal,PAAD NA NA boxplot AC003090.1 NA chr7 25593351 25750994 - 157644 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC003090.1 NA 0.035 80-90% NA NA Breast_cancer,CRC,HCC NA NA boxplot RP11-46J23.1 NA chr4 70703747 70704491 - 745 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-46J23.1 NA 0.071 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot ADIPOQ-AS1 ADIPOQ antisense RNA 1 chr3 186851886 186856123 - 4238 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ADIPOQ-AS1 NA 0.012 80-90% NA NA Breast_cancer,Normal NA NA boxplot CTD-2561B21.4 NA chr17 80940418 80942033 - 1616 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2561B21.4 NA 0.106 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-428J1.5 NA chr6 5029972 5043449 + 13478 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-428J1.5 NA 0.682 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP1-102K2.9 NA chr22 30275215 30276951 - 1737 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-102K2.9 NA 0.024 60-70% NA NA Breast_cancer,CRC NA NA boxplot RP11-756J15.2 NA chr18 13279415 13280110 - 696 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-756J15.2 NA 0.047 10-20% NA NA Normal,PAAD NA NA boxplot CTD-2619J13.17 NA chr19 58428632 58431148 - 2517 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2619J13.17 NA 0.271 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-360P21.2 NA chr3 179101366 179147973 - 46608 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-360P21.2 NA 0.024 70-80% Testis 4.906892038 CRC,Normal NA NA boxplot AC008060.7 NA chr7 155382076 155396356 + 14281 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC008060.7 NA 0.012 90-100% Brain 4.311631321 Breast_cancer,HCC NA NA boxplot RP5-1087E8.3 NA chr1 226992140 226993206 + 1067 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-1087E8.3 NA 0.118 50-60% NA NA HCC,Normal,PAAD NA NA boxplot MIR210HG MIR210 host gene chr11 565660 568457 - 2798 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MIR210HG NA 0.106 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC009502.4 NA chr2 219685381 219737937 + 52557 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC009502.4 NA 0.024 40-50% NA NA Breast_cancer,PAAD NA NA boxplot OR5BH1P olfactory receptor family 5 subfamily BH member 1 pseudogene chrX 131398054 131398972 - 919 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=OR5BH1P NA 0.012 90-100% Pituitary 4.027995497 NA NA NA boxplot MICG MHC class I polypeptide-related sequence G (pseudogene) chr6 29812565 29812696 - 132 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MICG NA 0.012 80-90% NA NA CRC NA NA boxplot AC017079.4 NA chr2 128217588 128218072 + 485 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC017079.4 NA 0.012 80-90% Muscle 3.42317044 HCC NA NA boxplot AC002400.1 NA chr16 23500905 23501630 + 726 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC002400.1 NA 0.012 40-50% NA NA Normal,PAAD NA NA boxplot RP3-322G13.7 NA chr20 23346941 23351486 - 4546 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-322G13.7 NA 0.012 60-70% Testis 1.824262097 NA NA NA boxplot AC139099.4 NA chr17 83144131 83177607 + 33477 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC139099.4 NA 0.094 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot YEATS2-AS1 YEATS2 antisense RNA 1 chr3 183806457 183810783 - 4327 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=YEATS2-AS1 NA 0.259 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot LY86-AS1 LY86 antisense RNA 1 chr6 6346465 6622771 - 276307 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LY86-AS1 exo_circ_002672,exo_circ_023753,exo_circ_049852,exo_circ_016370 0.906 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),PAAD(down) NA boxplot RP13-895J2.2 NA chr12 132275391 132278329 + 2939 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP13-895J2.2 NA 0.024 10-20% NA NA Breast_cancer,HCC NA NA boxplot RP11-135A24.4 NA chr10 32346499 32347179 + 681 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-135A24.4 NA 0.424 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot LINC01126 long intergenic non-protein coding RNA 1126 chr2 43227210 43228855 + 1646 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01126 NA 0.141 50-60% NA NA Breast_cancer,CRC,Normal,PAAD NA NA boxplot CTD-3064M3.3 NA chr8 141353403 141355365 - 1963 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-3064M3.3 NA 0.059 60-70% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot ZEB2-AS1 ZEB2 antisense RNA 1 chr2 144518097 144521477 + 3381 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ZEB2-AS1 NA 0.988 0-10% NA NA CHD,CRC,HCC,Normal,PAAD CHD(down),CRC(up),PAAD(up) NA boxplot RARRES2P4 retinoic acid receptor responder (tazarotene induced) 2 pseudogene 4 chr4 190037916 190038399 - 484 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RARRES2P4 NA 0.176 50-60% Testis 4.906892038 CRC,HCC,Normal,PAAD NA NA boxplot RP11-90L1.8 NA chr13 110613082 110616353 - 3272 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-90L1.8 NA 0.047 80-90% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot MTATP6P19 mitochondrially encoded ATP synthase 6 pseudogene 19 chrX 102798396 102799560 + 1165 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MTATP6P19 NA 0.035 50-60% NA NA PAAD NA NA boxplot HNF4A-AS1 HNF4A antisense RNA 1 chr20 44372746 44395706 - 22961 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HNF4A-AS1 NA 0.282 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-51B23.3 NA chr11 12538083 12540967 - 2885 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-51B23.3 NA 0.012 10-20% NA NA PAAD NA NA boxplot RP13-104F24.3 NA chr17 64750420 64751311 + 892 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP13-104F24.3 NA 0.141 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot SPACA6P-AS SPACA6P antisense RNA chr19 51685363 51693456 - 8094 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SPACA6P-AS NA 0.012 90-100% NA NA Breast_cancer NA NA boxplot AP000692.10 NA chr21 36319792 36320670 - 879 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AP000692.10 NA 0.282 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-767L7.2 NA chr3 120041190 120041537 + 348 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-767L7.2 NA 0.059 80-90% NA NA CRC,Normal NA NA boxplot GATA2-AS1 GATA2 antisense RNA 1 chr3 128489212 128502348 + 13137 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GATA2-AS1 NA 0.941 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up),HCC(up),PAAD(up) NA boxplot RP3-416J7.1 NA chr6 167607 170631 - 3025 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-416J7.1 NA 0.012 10-20% NA NA Normal NA NA boxplot RP11-363J20.2 NA chr14 69239166 69260567 - 21402 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-363J20.2 NA 0.035 40-50% Testis 3.584046887 HCC NA NA boxplot RP11-89F3.2 NA chr1 145286610 145287755 - 1146 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-89F3.2 NA 0.012 50-60% NA NA Breast_cancer,Normal NA NA boxplot RP11-705O24.2 NA chr8 61889839 61894206 + 4368 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-705O24.2 NA 0.012 0-10% Testis 4.906892038 PAAD NA NA boxplot RNF216-IT1 RNF216 intronic transcript 1 chr7 5662432 5680461 - 18030 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RNF216-IT1 exo_circ_050048,exo_circ_039197 0.129 70-80% NA NA CRC,HCC,Normal,PAAD NA NA boxplot AL450226.2 NA chr17 2232680 2233610 + 931 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AL450226.2 NA 0.035 60-70% Testis 4.876378135 Breast_cancer,Normal NA NA boxplot RP11-826N14.2 NA chr5 176049678 176062021 - 12344 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-826N14.2 NA 0.012 90-100% NA NA Breast_cancer,CRC NA NA boxplot RP11-422P24.10 NA chr1 153966516 153966930 + 415 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-422P24.10 NA 0.059 50-60% NA NA HCC,Normal,PAAD NA NA boxplot XRCC6P2 X-ray repair complementing defective repair in Chinese hamster cells 6 pseudogene 2 chrX 150231075 150232896 - 1822 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=XRCC6P2 NA 0.176 80-90% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP4-561L24.3 NA chr1 93847174 93848939 + 1766 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-561L24.3 NA 0.176 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-67L3.4 NA chr1 54887563 54888850 + 1288 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-67L3.4 NA 0.024 50-60% Testis 3.343212684 Breast_cancer,PAAD NA NA boxplot RP11-329A6.1 NA chr2 123850522 123850695 - 174 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-329A6.1 exo_circ_053489,exo_circ_043365 0.024 40-50% NA NA Normal NA NA boxplot AC093388.3 NA chr2 190534855 190568102 + 33248 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC093388.3 NA 0.506 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-354B3.1 NA chr15 94273496 94274005 + 510 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-354B3.1 NA 0.047 90-100% NA NA CRC,Normal NA NA boxplot RP11-402J6.1 NA chr4 112515385 112546881 + 31497 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-402J6.1 NA 0.035 30-40% Testis 4.699251211 Breast_cancer,HCC,PAAD NA NA boxplot RP11-761I4.5 NA chr15 81335577 81336119 + 543 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-761I4.5 exo_circ_057281 0.012 80-90% NA NA NA NA NA boxplot XXbac-B444P24.14 NA chr22 20320739 20321203 + 465 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=XXbac-B444P24.14 NA 0.024 80-90% NA NA Breast_cancer,CRC,Normal NA NA boxplot AC112721.1 NA chr2 237421420 237425276 - 3857 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC112721.1 exo_circ_053727,exo_circ_014396,exo_circ_053728 0.588 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot PMS2P2 PMS1 homolog 2, mismatch repair system component pseudogene 2 chr7 75344015 75359550 - 15536 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PMS2P2 NA 1 0-10% NA NA CHD,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-482D24.2 NA chr12 106680758 106684700 - 3943 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-482D24.2 NA 0.035 70-80% Testis 4.634752249 CRC,Normal,PAAD NA NA boxplot ABALON apoptotic BCL2L1-antisense long non-coding RNA chr20 31721507 31723409 + 1903 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ABALON NA 0.929 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot RP11-429J17.2 NA chr8 143696154 143698413 + 2260 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-429J17.2 NA 0.4 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CTB-50L17.7 NA chr19 4447304 4448217 + 914 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTB-50L17.7 NA 0.059 50-60% NA NA CRC,HCC,PAAD NA NA boxplot LINC00917 long intergenic non-protein coding RNA 917 chr16 86331844 86349683 - 17840 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00917 NA 0.024 40-50% Testis 4.889930829 Breast_cancer,CRC,HCC NA NA boxplot RP11-445P17.8 NA chr10 5266033 5271236 - 5204 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-445P17.8 NA 0.153 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-396F22.1 NA chr12 38906451 38909592 + 3142 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-396F22.1 NA 0.129 50-60% NA NA Breast_cancer,CRC,Normal,PAAD NA NA boxplot CTB-1144G6.6 NA chr10 114280725 114281258 - 534 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTB-1144G6.6 NA 0.024 90-100% NA NA CRC NA NA boxplot CTC-453G23.5 NA chr19 48118432 48127706 + 9275 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-453G23.5 NA 0.212 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot BANF1P3 barrier to autointegration factor 1 pseudogene 3 chr2 230725143 230725403 - 261 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=BANF1P3 NA 0.412 60-70% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot DHX40P1 NA chr17 59976009 60002384 - 26376 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DHX40P1 NA 0.8 40-50% Testis 4.906892038 CRC,HCC,Normal,PAAD NA NA boxplot SP2-AS1 SP2 antisense RNA 1 chr17 47897330 47941410 - 44081 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SP2-AS1 NA 0.553 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-889L3.1 NA chr5 178055604 178056194 + 591 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-889L3.1 NA 0.929 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down) NA boxplot RPS2P45 ribosomal protein S2 pseudogene 45 chr16 69033675 69036042 + 2368 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPS2P45 NA 0.071 80-90% Testis 2.230341167 Breast_cancer,CRC,Normal NA NA boxplot RP11-1191J2.5 NA chr4 661209 661945 - 737 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1191J2.5 NA 0.129 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CTD-2566J3.1 NA chr14 68125004 68130196 - 5193 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2566J3.1 NA 0.035 60-70% NA NA HCC NA NA boxplot RP11-460I13.6 NA chr1 27990158 27990524 - 367 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-460I13.6 NA 0.035 40-50% NA NA Breast_cancer,CRC,Normal NA NA boxplot CTC-526N19.1 NA chr19 33906352 33908391 + 2040 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-526N19.1 NA 0.494 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot AC092614.2 NA chr2 191229165 191246172 - 17008 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC092614.2 NA 0.024 10-20% NA NA Breast_cancer,HCC,PAAD NA NA boxplot DPRXP4 divergent-paired related homeobox pseudogene 4 chr17 30975387 30975954 + 568 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DPRXP4 NA 0.165 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot KRT18P33 keratin 18 pseudogene 33 chr2 65666695 65667737 + 1043 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KRT18P33 NA 0.012 90-100% Cervix 4.906892038 Breast_cancer NA NA boxplot RP11-467L13.7 NA chr12 31729117 31731204 + 2088 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-467L13.7 NA 0.741 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-111N20.4 NA chr10 63658074 63658521 + 448 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-111N20.4 NA 0.012 90-100% NA NA NA NA NA boxplot CTD-2342N23.1 NA chr8 134764809 134767276 + 2468 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2342N23.1 NA 0.024 0-10% NA NA Breast_cancer,CRC,Normal NA NA boxplot CTD-2587M2.1 NA chr5 109237120 109326369 - 89250 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2587M2.1 NA 0.294 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RPL7P23 ribosomal protein L7 pseudogene 23 chr5 77582376 77583122 + 747 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL7P23 NA 1 0-10% NA NA CHD,CRC,HCC,Normal,PAAD PAAD(down) NA boxplot RP13-216E22.4 NA chrX 73948973 73949558 + 586 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP13-216E22.4 NA 0.4 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot TFAP2A-AS1 TFAP2A antisense RNA 1 chr6 10409340 10416446 + 7107 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TFAP2A-AS1 NA 0.035 60-70% Prostate 1.277456181 Breast_cancer,Normal NA NA boxplot DDX55P1 DEAD-box helicase 55 pseudogene 1 chr12 11512723 11514136 + 1414 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DDX55P1 NA 0.035 40-50% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot LINC00578 long intergenic non-protein coding RNA 578 chr3 177441921 177752305 + 310385 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00578 NA 0.035 60-70% NA NA Normal,PAAD NA NA boxplot RP11-69H7.3 NA chr15 75211301 75212167 - 867 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-69H7.3 NA 0.224 80-90% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-326I19.2 NA chr4 4820405 4821452 + 1048 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-326I19.2 NA 0.035 70-80% NA NA Breast_cancer,CRC,Normal NA NA boxplot RP11-348H3.5 NA chr1 212855175 212855366 - 192 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-348H3.5 NA 0.094 30-40% Pituitary 4.906892038 Breast_cancer,CRC,Normal,PAAD NA NA boxplot RP11-867G23.10 NA chr11 66409158 66417137 + 7980 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-867G23.10 NA 0.153 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-159D12.6 NA chr17 58006674 58008187 + 1514 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-159D12.6 NA 0.624 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot RP11-1167A19.2 NA chr11 66067277 66069619 - 2343 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1167A19.2 NA 0.2 70-80% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-422P24.12 NA chr1 153964361 153965070 + 710 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-422P24.12 NA 0.141 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CTD-2353F22.2 NA chr5 36667717 36669958 + 2242 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2353F22.2 NA 0.024 10-20% NA NA Breast_cancer,PAAD NA NA boxplot RP11-879F14.1 NA chr18 61592375 61748832 - 156458 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-879F14.1 exo_circ_040514 0.871 0-10% Testis 3.862851914 CRC,HCC,Normal,PAAD CHD(down),HCC(down),PAAD(down) NA boxplot FABP5P3 fatty acid binding protein 5 pseudogene 3 chr7 152436895 152443187 + 6293 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FABP5P3 NA 0.259 20-30% Testis 2.480316267 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-10N23.4 NA chr8 93733216 93734022 + 807 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-10N23.4 NA 0.235 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP1-140K8.5 NA chr6 3904920 3911979 - 7060 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-140K8.5 NA 0.082 0-10% NA NA Breast_cancer,CRC,Normal,PAAD NA NA boxplot RPL9P3 ribosomal protein L9 pseudogene 3 chr14 35262462 35263036 + 575 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL9P3 NA 0.024 60-70% NA NA CRC NA NA boxplot RP11-554I8.2 NA chr10 6737382 6739026 + 1645 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-554I8.2 NA 0.024 30-40% Muscle 2.057302796 PAAD NA NA boxplot RP11-219C24.10 NA chr1 13324039 13324518 + 480 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-219C24.10 NA 0.012 70-80% NA NA Breast_cancer,PAAD NA NA boxplot RP11-90D4.3 NA chr12 8321876 8329614 + 7739 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-90D4.3 NA 0.024 50-60% NA NA Breast_cancer,HCC,Normal NA NA boxplot RP11-1L9.1 NA chrX 13377188 13403019 + 25832 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1L9.1 NA 0.024 70-80% Testis 4.413158625 Normal,PAAD NA NA boxplot RPL5P16 ribosomal protein L5 pseudogene 16 chr5 82777797 82778586 + 790 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL5P16 NA 0.012 10-20% NA NA PAAD NA NA boxplot KB-1410C5.5 NA chr8 101208148 101208558 + 411 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KB-1410C5.5 NA 0.129 70-80% NA NA CRC,HCC,Normal,PAAD NA NA boxplot AMMECR1LP1 AMMECR1 like pseudogene 1 chr13 96573659 96574499 + 841 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AMMECR1LP1 NA 0.012 40-50% NA NA Breast_cancer NA NA boxplot RP11-165M1.1 NA chr16 12374355 12376032 + 1678 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-165M1.1 NA 0.059 60-70% NA NA Breast_cancer,CRC,Normal,PAAD NA NA boxplot CTD-2525I3.5 NA chr19 52284780 52297920 - 13141 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2525I3.5 NA 0.035 90-100% NA NA Normal NA NA boxplot LVCAT1 liver cancer-associated transcript 1 chr4 44016861 44022063 + 5203 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LVCAT1 NA 0.012 80-90% NA NA HCC,Normal NA NA boxplot HSPE1P3 heat shock protein family E (Hsp10) member 1 pseudogene 3 chr15 90634725 90635033 + 309 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HSPE1P3 NA 0.224 60-70% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot AC093642.5 NA chr2 242088633 242160153 + 71521 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC093642.5 NA 0.929 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-471B22.3 NA chr14 90383365 90387973 + 4609 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-471B22.3 NA 0.271 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CHCHD2P9 coiled-coil-helix-coiled-coil-helix domain containing 2 pseudogene 9 chr9 79391304 79391759 + 456 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CHCHD2P9 NA 0.4 80-90% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-173E2.1 NA chr4 138560704 138561941 + 1238 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-173E2.1 NA 0.2 80-90% Testis 4.169774981 HCC,Normal,PAAD NA NA boxplot RP11-38L15.8 NA chr10 46632387 46635472 + 3086 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-38L15.8 NA 0.306 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot KCNK15-AS1 KCNK15 antisense RNA 1 (head to head) chr20 44694892 44746021 - 51130 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KCNK15-AS1 NA 0.012 0-10% NA NA Breast_cancer,Normal NA NA boxplot RP4-533D7.5 NA chr1 46134531 46139081 + 4551 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-533D7.5 NA 0.024 60-70% Testis 2.634830963 HCC,PAAD NA NA boxplot NMD3P1 NMD3 ribosome export adaptor pseudogene 1 chr7 63908966 63910453 - 1488 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NMD3P1 NA 0.035 50-60% NA NA Normal NA NA boxplot LRP1-AS LRP1 antisense RNA chr12 57144620 57147619 - 3000 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LRP1-AS NA 0.059 20-30% NA NA Breast_cancer,CRC,HCC,PAAD NA NA boxplot RP11-81F13.2 NA chr14 36808871 36828729 + 19859 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-81F13.2 NA 0.012 90-100% NA NA PAAD NA NA boxplot RP11-298D21.1 NA chr16 83721119 83772936 - 51818 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-298D21.1 NA 0.024 10-20% Brain 3.826762793 HCC,PAAD NA NA boxplot AC008079.9 NA chr22 18178038 18205915 - 27878 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC008079.9 NA 0.012 40-50% Testis 4.851095072 Normal NA NA boxplot RP4-706A16.3 NA chr1 77129114 77129668 + 555 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-706A16.3 NA 0.929 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-554F20.1 NA chr9 99585786 99819889 - 234104 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-554F20.1 exo_circ_052785,exo_circ_039495,exo_circ_050502 0.318 40-50% Testis 2.397326623 CRC,HCC,Normal,PAAD NA NA boxplot RP5-1099C19.2 NA chr7 92540268 92557877 - 17610 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-1099C19.2 NA 0.059 30-40% NA NA CRC,Normal,PAAD NA NA boxplot RP11-227G15.12 NA chr17 32423971 32446038 - 22068 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-227G15.12 NA 0.047 40-50% NA NA Breast_cancer,HCC,Normal NA NA boxplot RP11-750H9.7 NA chr11 47513605 47514889 - 1285 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-750H9.7 NA 0.118 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot MTCO1P4 MT-CO1 pseudogene 4 chr8 103088796 103090671 + 1876 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MTCO1P4 NA 0.012 60-70% NA NA NA NA NA boxplot NEK2P4 NEK2 pseudogene 4 chr2 131177618 131178946 - 1329 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NEK2P4 NA 0.059 10-20% Testis 4.906892038 CRC,Normal,PAAD NA NA boxplot SIGLEC18P sialic acid binding Ig-like lectin 18, pseudogene chr19 51119987 51122965 + 2979 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SIGLEC18P NA 0.035 70-80% NA NA Breast_cancer,CRC,HCC NA NA boxplot RP13-140E4.1 NA chrX 90039213 90039834 - 622 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP13-140E4.1 NA 0.282 90-100% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-488P3.1 NA chr1 93752924 93775444 - 22521 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-488P3.1 NA 0.141 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-618G20.1 NA chr14 61734138 61776260 + 42123 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-618G20.1 exo_circ_051379 0.859 10-20% NA NA CRC,HCC,Normal,PAAD CHD(down),PAAD(up) NA boxplot AC104058.1 NA chr2 186162949 186163245 - 297 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC104058.1 NA 0.047 30-40% NA NA Breast_cancer,CRC NA NA boxplot ABHD15-AS1 ABHD15 antisense RNA 1 chr17 29560547 29707090 + 146544 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ABHD15-AS1 NA 0.024 80-90% NA NA CRC,Normal NA NA boxplot RP11-187A9.3 NA chr13 42043727 42044247 - 521 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-187A9.3 NA 0.059 30-40% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot C1QBPP2 complement component 1, q subcomponent binding protein, pseudogene 2 chr11 66761575 66762399 - 825 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=C1QBPP2 NA 0.094 60-70% NA NA HCC,Normal,PAAD NA NA boxplot AC073415.2 NA chr2 108878308 108878460 + 153 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC073415.2 NA 0.082 10-20% Testis 2.167096633 HCC,Normal,PAAD NA NA boxplot AC093616.4 NA chr2 87700984 87738105 + 37122 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC093616.4 NA 0.929 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down) NA boxplot AF127936.3 NA chr21 14746762 14753863 - 7102 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AF127936.3 NA 0.047 70-80% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-101P17.15 NA chr13 21287634 21287828 - 195 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-101P17.15 NA 0.059 80-90% NA NA CRC,Normal NA NA boxplot RNF2P1 ring finger protein 2 pseudogene 1 chr9 6668999 6670008 - 1010 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RNF2P1 NA 0.012 80-90% Liver 2.049318988 HCC NA NA boxplot RP11-54A4.2 NA chr1 150548562 150557724 - 9163 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-54A4.2 NA 0.353 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP13-188A5.1 NA chrX 55908123 56015173 + 107051 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP13-188A5.1 NA 0.482 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CTD-2117L12.1 NA chr5 58541567 58558243 - 16677 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2117L12.1 NA 0.012 80-90% NA NA Breast_cancer,CRC NA NA boxplot WASIR2 WASH and IL9R antisense RNA 2 chr16 22910 25123 + 2214 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=WASIR2 NA 0.282 50-60% Ovary 1.38317089 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC004692.5 NA chr7 43274159 43274582 + 424 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC004692.5 NA 0.024 10-20% Testis 4.906892038 PAAD NA NA boxplot RP11-783K16.5 NA chr11 64245964 64248217 + 2254 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-783K16.5 NA 0.459 20-30% Testis 1.360544015 CRC,HCC,Normal,PAAD NA NA boxplot CTD-2078B5.2 NA chr5 39520431 39524708 + 4278 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2078B5.2 NA 0.153 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot AC142528.1 NA chr2 3519275 3523197 + 3923 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC142528.1 NA 0.659 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),PAAD(down) NA boxplot KB-226F1.2 NA chr22 23969211 23969873 + 663 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KB-226F1.2 exo_circ_014322 0.035 70-80% NA NA Breast_cancer,CRC NA NA boxplot RP11-499F3.2 NA chr15 81660482 81871125 - 210644 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-499F3.2 NA 0.035 50-60% NA NA HCC,PAAD NA NA boxplot MTND5P32 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 5 pseudogene 32 chr15 58152606 58154407 + 1802 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MTND5P32 NA 0.082 10-20% NA NA CRC,Normal NA NA boxplot RP11-646I6.6 NA chr4 56396312 56396871 + 560 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-646I6.6 NA 0.024 80-90% NA NA CRC,HCC,Normal NA NA boxplot LINC00339 long intergenic non-protein coding RNA 339 chr1 22024531 22031225 + 6695 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00339 NA 0.965 0-10% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-369C8.1 NA chr14 45706250 45715952 - 9703 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-369C8.1 NA 0.012 20-30% Kidney 3.89193387 Breast_cancer,Normal NA NA boxplot CATIP-AS2 CATIP antisense RNA 2 chr2 218326889 218357966 - 31078 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CATIP-AS2 exo_circ_024212 0.129 70-80% NA NA Breast_cancer,CRC,Normal,PAAD NA NA boxplot SDC4P syndecan 4 pseudogene chr22 30481311 30481911 - 601 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SDC4P NA 0.012 90-100% Liver 3.997117603 Breast_cancer NA NA boxplot ZNF33BP1 zinc finger protein 33B pseudogene 1 chr10 37794276 37796109 - 1834 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ZNF33BP1 NA 0.012 80-90% NA NA PAAD NA NA boxplot RP11-453E17.3 NA chr4 67718996 67724262 - 5267 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-453E17.3 NA 0.153 20-30% NA NA Normal,PAAD NA NA boxplot RP11-632K20.7 NA chr15 32519848 32536926 - 17079 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-632K20.7 NA 0.929 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-426A6.5 NA chr9 135503273 135506447 - 3175 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-426A6.5 NA 0.224 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-629N8.4 NA chr12 64709458 64710513 + 1056 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-629N8.4 NA 0.035 60-70% NA NA CRC,Normal NA NA boxplot OR1X1P olfactory receptor family 1 subfamily X member 1 pseudogene chr5 176006145 176007387 + 1243 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=OR1X1P NA 0.012 50-60% Testis 4.906892038 Breast_cancer,CHD NA NA boxplot RP11-345P4.10 NA chr1 1659325 1662602 + 3278 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-345P4.10 NA 0.235 60-70% NA NA CRC,HCC,Normal NA NA boxplot TBX2-AS1 TBX2 antisense RNA 1 chr17 61393456 61411555 - 18100 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TBX2-AS1 NA 0.106 50-60% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot AC114813.1 NA chr2 126110099 126117985 - 7887 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC114813.1 NA 0.012 70-80% Testis 4.906892038 NA NA NA boxplot RBBP4P1 retinoblastoma binding protein 4 pseudogene 1 chr5 14797125 14798400 - 1276 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RBBP4P1 NA 0.953 10-20% NA NA CHD,CRC,HCC,Normal,PAAD CHD(up),HCC(down) NA boxplot C9orf139 chromosome 9 open reading frame 139 chr9 137027464 137037957 + 10494 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=C9orf139 NA 0.635 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CRC(up) NA boxplot DIP2A-IT1 DIP2A intronic transcript 1 chr21 46462471 46469306 + 6836 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DIP2A-IT1 NA 0.153 30-40% NA NA CRC,Normal,PAAD NA NA boxplot PWRN1 Prader-Willi region non-protein coding RNA 1 chr15 24493137 24652130 + 158994 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PWRN1 NA 0.035 40-50% Testis 2.706843703 Breast_cancer,CRC,Normal NA NA boxplot CTB-1I21.1 uncharacterized LOC105379191 chr5 136734927 136754686 + 19760 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTB-1I21.1 NA 0.012 30-40% Brain 4.906892038 HCC NA NA boxplot ZNF582-AS1 ZNF582 antisense RNA 1 (head to head) chr19 56393656 56399172 + 5517 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ZNF582-AS1 NA 0.565 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP5-1180E21.4 NA chr1 111181374 111181491 - 118 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-1180E21.4 NA 0.306 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-700P18.1 NA chr7 56288230 56291425 + 3196 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-700P18.1 NA 0.753 10-20% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot RP11-98G7.1 NA chr1 156446412 156456577 - 10166 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-98G7.1 NA 0.012 80-90% Testis 1.893688926 Breast_cancer NA NA boxplot CTC-320C6.1 NA chr5 163855140 163856642 - 1503 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-320C6.1 NA 0.012 80-90% NA NA PAAD NA NA boxplot LINC00235 long intergenic non-protein coding RNA 235 chr16 525155 527407 - 2253 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00235 NA 0.2 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-305P14.1 NA chr5 66298468 66322944 + 24477 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-305P14.1 NA 0.024 60-70% Testis 4.836202556 Normal NA NA boxplot RP11-3B12.2 NA chr7 125172218 125379321 + 207104 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-3B12.2 NA 0.012 70-80% Testis 4.035776145 Normal NA NA boxplot AC067940.1 NA chr2 168231921 168232220 - 300 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC067940.1 NA 0.082 20-30% NA NA CRC,Normal,PAAD NA NA boxplot AC099535.4 NA chr3 27486247 27486617 + 371 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC099535.4 NA 0.012 80-90% NA NA NA NA NA boxplot BMS1P16 BMS1, ribosome biogenesis factor pseudogene 16 chr15 21160305 21167357 + 7053 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=BMS1P16 NA 0.094 80-90% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-702L15.4 NA chr15 64470253 64471364 + 1112 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-702L15.4 NA 0.059 70-80% NA NA CRC,Normal NA NA boxplot HNRNPA1P28 heterogeneous nuclear ribonucleoprotein A1 pseudogene 28 chrX 119220782 119221742 + 961 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HNRNPA1P28 NA 0.024 90-100% Testis 4.906892038 Breast_cancer,HCC,Normal NA NA boxplot GMCL1P2 germ cell-less, spermatogenesis associated 1 pseudogene 2 chr2 108367116 108367938 + 823 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GMCL1P2 NA 0.012 40-50% NA NA Normal NA NA boxplot RP11-133K1.8 NA chr15 40244925 40247366 + 2442 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-133K1.8 NA 0.059 40-50% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot POLR3GP1 polymerase (RNA) III (DNA directed) polypeptide G (32kD) pseudogene 1 chr14 91603173 91603433 - 261 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=POLR3GP1 NA 0.553 70-80% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-513D5.2 NA chr8 38335981 38337551 + 1571 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-513D5.2 NA 0.424 70-80% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CTD-2006K23.2 NA chr17 74672712 74677600 - 4889 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2006K23.2 NA 0.035 60-70% Brain 3.553980154 CRC,HCC,Normal NA NA boxplot ZNF736P9Y zinc finger protein 736 pseudogene 9, Y-linked chrY 8068896 8070723 - 1828 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ZNF736P9Y NA 0.024 0-10% Skin 3.016833328 PAAD NA NA boxplot LINC00853 long intergenic non-protein coding RNA 853 chr1 47179250 47180339 + 1090 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00853 NA 0.882 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-402C9.1 NA chr4 182144852 182190382 + 45531 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-402C9.1 NA 0.012 90-100% NA NA Breast_cancer,PAAD NA NA boxplot RP11-379F4.7 NA chr3 158693120 158693768 - 649 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-379F4.7 NA 0.024 10-20% NA NA Breast_cancer,Normal NA NA boxplot RP11-480O10.1 NA chr8 13844101 13849109 - 5009 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-480O10.1 NA 0.012 10-20% Testis 4.906892038 CRC NA NA boxplot RP3-522P13.2 NA chr6 25272200 25273751 - 1552 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-522P13.2 exo_circ_044457 0.082 50-60% Testis 4.139376558 CRC,HCC,Normal NA NA boxplot CENPCP1 centromere protein C pseudogene 1 chr12 89500093 89502670 + 2578 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CENPCP1 NA 0.388 80-90% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-282I1.1 NA chr10 123356450 123517708 + 161259 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-282I1.1 NA 0.106 60-70% Testis 2.154210629 Breast_cancer,CRC,HCC,Normal NA NA boxplot TNK2-AS1 TNK2 antisense RNA 1 chr3 195908076 195911257 + 3182 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TNK2-AS1 NA 0.859 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot PCOLCE-AS1 PCOLCE antisense RNA 1 chr7 100589402 100604206 - 14805 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PCOLCE-AS1 NA 0.082 80-90% NA NA Breast_cancer,HCC,PAAD NA NA boxplot RP11-395L14.18 NA chr2 113605867 113607908 - 2042 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-395L14.18 NA 0.706 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),PAAD(down) NA boxplot RP11-354E23.5 NA chr10 72766560 72767052 + 493 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-354E23.5 exo_circ_025911 0.035 10-20% NA NA Normal,PAAD NA NA boxplot RP11-17M16.2 NA chr18 76491652 76493918 + 2267 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-17M16.2 NA 0.141 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-20I23.13 NA chr16 2554060 2556060 - 2001 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-20I23.13 NA 0.306 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot C8orf37-AS1 C8orf37 antisense RNA 1 chr8 95204456 95810136 + 605681 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=C8orf37-AS1 exo_circ_025370 0.341 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CYP17A1-AS1 CYP17A1 antisense RNA 1 chr10 102832721 102834516 + 1796 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CYP17A1-AS1 NA 0.259 70-80% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-807G9.2 NA chr1 9983141 9984568 + 1428 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-807G9.2 NA 0.318 70-80% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CTB-31N19.3 NA chr16 21626742 21627569 + 828 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTB-31N19.3 NA 0.612 20-30% NA NA CRC,HCC,Normal,PAAD CRC(up) NA boxplot CTD-2023M8.1 NA chr5 18704433 18746173 - 41741 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2023M8.1 NA 0.071 20-30% Spleen 4.906892038 CRC,HCC,Normal NA NA boxplot RP11-407G23.7 NA chr16 57245832 57246396 - 565 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-407G23.7 NA 0.071 70-80% NA NA HCC,Normal NA NA boxplot LINC00506 long intergenic non-protein coding RNA 506 chr3 87089129 87157069 + 67941 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00506 NA 0.047 30-40% NA NA Breast_cancer,CRC,Normal,PAAD NA NA boxplot RP11-42A4.1 NA chr4 84371393 84380189 - 8797 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-42A4.1 NA 0.012 50-60% Esophagus 4.906892038 NA NA NA boxplot CCDC58P3 coiled-coil domain containing 58 pseudogene 3 chr18 12211378 12211807 + 430 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CCDC58P3 NA 0.035 80-90% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CTC-457L16.1 NA chr17 19030857 19033529 + 2673 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-457L16.1 NA 0.012 90-100% NA NA Breast_cancer,PAAD NA NA boxplot CTD-2124B8.2 NA chr5 37286449 37286977 - 529 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2124B8.2 exo_circ_044257 0.247 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot AC108868.5 NA chr2 106521903 106538079 - 16177 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC108868.5 NA 0.012 10-20% Cervix 4.446426832 Breast_cancer,HCC,Normal NA NA boxplot RP11-357P18.2 NA chr1 207372559 207373252 + 694 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-357P18.2 NA 0.247 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-442P12.2 NA chr4 15743196 15743582 + 387 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-442P12.2 NA 0.047 80-90% Whole Blood 4.906892038 CRC,Normal NA NA boxplot RP11-435O5.4 NA chr9 95514045 95514520 + 476 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-435O5.4 NA 0.035 60-70% NA NA Normal,PAAD NA NA boxplot EHMT2-AS1 EHMT2 antisense RNA 1 chr6 31883761 31884204 + 444 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=EHMT2-AS1 NA 0.094 60-70% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot CTD-2547L16.3 NA chr8 18088569 18089687 - 1119 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2547L16.3 NA 0.576 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot LINC01160 long intergenic non-protein coding RNA 1160 chr1 111599655 111608723 - 9069 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01160 NA 0.2 60-70% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot CTAGE10P CTAGE family member 10, pseudogene chr13 49890591 49892998 + 2408 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTAGE10P NA 0.012 30-40% Testis 4.878037553 Breast_cancer,Normal NA NA boxplot AC016747.3 NA chr2 61141592 61144969 - 3378 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC016747.3 exo_circ_053883 0.859 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down) NA boxplot LINC01522 long intergenic non-protein coding RNA 1522 chr20 47980488 47988744 - 8257 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01522 NA 0.024 30-40% NA NA Breast_cancer,Normal NA NA boxplot BDNF-AS BDNF antisense RNA chr11 27506838 27698174 + 191337 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=BDNF-AS NA 0.459 20-30% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot DDX50P1 DEAD-box helicase 50 pseudogene 1 chr2 32201600 32203999 + 2400 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DDX50P1 NA 0.165 10-20% NA NA CRC,Normal,PAAD NA NA boxplot RP11-10A14.4 NA chr8 9151742 9168136 + 16395 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-10A14.4 NA 0.235 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP1-242N11.1 NA chr6 18522739 18674001 + 151263 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-242N11.1 NA 0.012 30-40% NA NA Breast_cancer,CRC,Normal NA NA boxplot RP11-32B5.5 NA chr15 21382383 21382842 + 460 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-32B5.5 NA 0.012 90-100% Testis 4.906892038 Breast_cancer,PAAD NA NA boxplot RP11-526I2.1 NA chr15 100558677 100559798 + 1122 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-526I2.1 NA 0.012 10-20% Testis 1.656388167 Normal NA NA boxplot RP5-1057I20.6 NA chr12 47817451 47817966 - 516 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-1057I20.6 NA 0.012 80-90% NA NA NA NA NA boxplot FRY-AS1 FRY antisense RNA 1 chr13 32025314 32031639 - 6326 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FRY-AS1 NA 0.071 60-70% NA NA CRC,Normal,PAAD NA NA boxplot AP001469.7 NA chr21 46246890 46247682 + 793 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AP001469.7 NA 0.082 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot AL109763.1 NA chr21 18477358 18486599 - 9242 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AL109763.1 NA 0.012 40-50% NA NA NA NA NA boxplot PHBP14 prohibitin pseudogene 14 chr4 167648430 167648796 + 367 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PHBP14 NA 0.012 70-80% NA NA Breast_cancer,HCC NA NA boxplot RP11-586D19.1 NA chr4 6200733 6239937 + 39205 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-586D19.1 NA 0.212 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot PCDHB19P protocadherin beta 19 pseudogene chr5 141239923 141243034 + 3112 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PCDHB19P NA 0.082 60-70% Testis 2.45138385 Breast_cancer,Normal,PAAD NA NA boxplot RP11-426L16.3 NA chr1 112693688 112696621 - 2934 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-426L16.3 NA 0.094 70-80% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-475D10.4 NA chr16 8666762 8667271 + 510 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-475D10.4 NA 0.035 90-100% NA NA HCC,Normal NA NA boxplot RP11-406H23.2 NA chr14 50448807 50456742 + 7936 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-406H23.2 NA 0.165 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot AC005682.6 NA chr7 22863874 22881350 - 17477 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC005682.6 exo_circ_055431 0.271 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot CTD-2330K9.2 NA chr3 49899302 49903757 + 4456 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2330K9.2 NA 0.024 90-100% Testis 4.847455078 Breast_cancer,HCC,PAAD NA NA boxplot RP11-476C8.2 NA chr4 87166844 87167734 + 891 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-476C8.2 exo_circ_021951 0.012 30-40% NA NA Breast_cancer,Normal,PAAD NA NA boxplot RP11-542B15.1 NA chr12 67519829 67567126 + 47298 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-542B15.1 NA 0.012 90-100% NA NA Normal NA NA boxplot RP4-620F22.2 NA chr1 89260582 89269754 + 9173 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-620F22.2 NA 0.141 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CTD-2201E9.2 NA chr5 9519853 9523178 - 3326 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2201E9.2 NA 0.024 10-20% Testis 4.906892038 PAAD NA NA boxplot LINC01410 long intergenic non-protein coding RNA 1410 chr9 62801461 62813486 + 12026 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01410 NA 0.906 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot LINC00028 long intergenic non-protein coding RNA 28 chr20 31485778 31487574 + 1797 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00028 NA 0.012 10-20% NA NA Breast_cancer,Normal NA NA boxplot ATP6V1G1P4 ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G1 pseudogene 4 chr10 35158306 35158640 + 335 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ATP6V1G1P4 NA 0.035 60-70% Testis 3.981444887 CRC,HCC,Normal NA NA boxplot MIR4290HG MIR4290 host gene chr9 90020654 90041499 - 20846 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MIR4290HG NA 0.012 0-10% NA NA Breast_cancer,PAAD NA NA boxplot RP11-297N6.4 NA chr8 11797928 11802568 - 4641 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-297N6.4 NA 0.259 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP1-149A16.12 NA chr22 32327171 32343105 - 15935 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-149A16.12 NA 0.012 30-40% Testis 3.464814209 HCC NA NA boxplot RP11-477N3.1 NA chr2 54082554 54085066 + 2513 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-477N3.1 NA 0.282 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-519C12.1 NA chr15 52648634 52649866 - 1233 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-519C12.1 NA 0.035 50-60% NA NA CRC,Normal NA NA boxplot ATP13A5-AS1 ATP13A5 antisense RNA 1 chr3 193307244 193314362 + 7119 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ATP13A5-AS1 NA 0.235 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot LINC00622 long intergenic non-protein coding RNA 622 chr1 119597702 119599271 - 1570 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00622 NA 0.059 50-60% NA NA CRC,Normal,PAAD NA NA boxplot RP11-16E23.5 NA chr15 65655620 65656085 - 466 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-16E23.5 NA 0.306 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-218C14.5 NA chr20 23655225 23656390 - 1166 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-218C14.5 NA 0.012 20-30% NA NA Breast_cancer,Normal NA NA boxplot AC098823.3 NA chr2 230690921 230700529 - 9609 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC098823.3 NA 0.035 80-90% NA NA Breast_cancer,CRC,Normal NA NA boxplot CTD-2547E10.6 NA chr16 21315911 21339037 + 23127 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2547E10.6 exo_circ_009277 0.918 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-488L18.4 NA chr1 247189851 247210856 - 21006 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-488L18.4 NA 0.929 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot GMPSP1 guanine monophosphate synthase pseudogene 1 chr4 8174421 8174999 + 579 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GMPSP1 NA 0.729 30-40% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-378J18.9 NA chr1 222477252 222504622 - 27371 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-378J18.9 NA 0.271 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-90J7.3 NA chr10 78179174 78675109 + 495936 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-90J7.3 NA 0.565 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down) NA boxplot RP11-172H24.4 NA chr13 20699307 20703718 - 4412 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-172H24.4 NA 0.165 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-498E2.9 NA chr9 122372605 122372825 + 221 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-498E2.9 NA 0.776 0-10% Skin 1.714022179 CRC,HCC,Normal,PAAD CHD(down),PAAD(down) NA boxplot ASLP1 argininosuccinate lyase pseudogene 1 chr22 23649213 23653334 - 4122 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ASLP1 NA 0.118 70-80% NA NA CHD,CRC,HCC,Normal NA NA boxplot HSPD1P10 heat shock protein family D (Hsp60) member 1 pseudogene 10 chr6 87298772 87300447 + 1676 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HSPD1P10 NA 0.012 80-90% Testis 1.351345785 NA NA NA boxplot RP11-171N4.2 NA chr4 156634494 156642454 - 7961 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-171N4.2 NA 0.012 80-90% Testis 4.906892038 CRC NA NA boxplot BMS1P2 NA chr10 47538377 47551954 - 13578 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=BMS1P2 NA 0.929 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(up),HCC(up),PAAD(up) NA boxplot RP11-210L7.3 NA chr12 102304355 102463491 + 159137 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-210L7.3 NA 0.141 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CTC-431G16.2 NA chr5 79774348 79816190 - 41843 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-431G16.2 NA 0.035 80-90% NA NA CRC,HCC NA NA boxplot RP11-522I20.3 NA chr9 83707594 83713378 + 5785 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-522I20.3 NA 0.847 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot LRRFIP1P1 leucine rich repeat (in FLII) interacting protein 1 pseudogene 1 chr3 179259028 179261273 - 2246 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LRRFIP1P1 NA 0.824 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot CTC-444N24.8 NA chr19 57261354 57262738 + 1385 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-444N24.8 NA 0.871 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down),HCC(down) NA boxplot RP11-379K17.9 NA chr3 170062244 170062951 + 708 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-379K17.9 NA 0.165 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-527H14.1 NA chr18 14978739 14979839 + 1101 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-527H14.1 NA 0.012 40-50% Spleen 3.70143144 Breast_cancer,PAAD NA NA boxplot RP11-359K18.4 NA chr1 162593103 162593754 + 652 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-359K18.4 NA 0.024 20-30% NA NA CRC NA NA boxplot RP11-667M19.9 NA chr11 113820856 113821885 - 1030 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-667M19.9 exo_circ_014609 0.118 50-60% NA NA Breast_cancer,CRC,Normal,PAAD NA NA boxplot AP002954.4 NA chr11 118704607 118750263 + 45657 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AP002954.4 NA 0.624 20-30% Testis 2.218224615 CRC,HCC,Normal,PAAD NA NA boxplot RP5-1102E8.3 NA chr1 76636877 76637339 + 463 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-1102E8.3 NA 0.012 70-80% NA NA PAAD NA NA boxplot CTC-260E6.7 NA chr19 20206844 20206954 - 111 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-260E6.7 NA 0.024 60-70% NA NA CRC,Normal,PAAD NA NA boxplot RP11-532M24.1 NA chr8 124579631 124580648 + 1018 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-532M24.1 NA 0.165 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot AC015922.7 NA chr17 15792862 15793045 + 184 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC015922.7 NA 0.012 90-100% NA NA PAAD NA NA boxplot RP11-54O7.3 NA chr1 916865 921016 - 4152 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-54O7.3 NA 0.071 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-1223D19.5 NA chr2 110022447 110035270 - 12824 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1223D19.5 NA 0.059 60-70% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot AC006116.19 NA chr19 56311928 56312486 - 559 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC006116.19 NA 0.024 50-60% NA NA PAAD NA NA boxplot RBMX2P3 RNA binding motif protein, X-linked 2 pseudogene 3 chr1 119084998 119085954 - 957 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RBMX2P3 NA 0.035 20-30% Cervix 4.906892038 Normal NA NA boxplot UPK1A-AS1 UPK1A antisense RNA 1 chr19 35667948 35673291 - 5344 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=UPK1A-AS1 NA 0.329 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot LLNLR-276H7.1 NA chr19 36070239 36071070 + 832 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LLNLR-276H7.1 NA 0.024 70-80% NA NA PAAD NA NA boxplot RP11-350J20.9 NA chr6 149904243 149906418 + 2176 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-350J20.9 NA 0.082 40-50% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot AC010127.3 NA chr2 165957399 166301784 + 344386 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC010127.3 NA 0.047 50-60% Testis 3.223205599 Breast_cancer,HCC NA NA boxplot MIR4732 microRNA 4732 chr17 28861072 28861966 - 895 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MIR4732 NA 0.224 20-30% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up) NA boxplot CTD-2193P3.2 NA chr5 81113385 81114852 - 1468 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2193P3.2 NA 0.294 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-5L12.1 NA chr11 9242448 9245509 - 3062 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-5L12.1 NA 0.094 70-80% NA NA Breast_cancer,CRC,Normal,PAAD NA NA boxplot RP11-262A16.1 NA chr15 96342953 96345651 + 2699 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-262A16.1 NA 0.071 30-40% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot RP11-334A14.5 NA chr1 53069938 53085502 - 15565 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-334A14.5 NA 0.024 80-90% NA NA Breast_cancer,PAAD NA NA boxplot CTA-246H3.11 NA chr22 25349543 25350322 - 780 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTA-246H3.11 NA 0.2 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot AC006947.1 NA chr17 66676372 66677404 + 1033 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC006947.1 exo_circ_040425 0.024 70-80% NA NA Breast_cancer,CRC,Normal NA NA boxplot CTC-232P5.1 NA chr19 5978403 6020363 + 41961 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-232P5.1 NA 0.047 80-90% NA NA Breast_cancer,CRC NA NA boxplot FTH1P8 ferritin, heavy polypeptide 1 pseudogene 8 chrX 148052233 148052746 + 514 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FTH1P8 NA 1 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP4-613A2.1 NA chr1 229508501 229514272 + 5772 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-613A2.1 NA 0.035 90-100% Testis 4.86540074 Normal NA NA boxplot RP5-916O11.2 NA chr11 35972428 35989007 + 16580 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-916O11.2 NA 0.012 80-90% Brain 4.906892038 NA NA NA boxplot ZNF702P zinc finger protein 702, pseudogene chr19 52968251 53037898 - 69648 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ZNF702P NA 0.906 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down),CRC(down) NA boxplot MYCBP2-AS1 MYCBP2 antisense RNA 1 chr13 77026767 77129717 + 102951 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MYCBP2-AS1 NA 0.506 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot CTD-2262B20.1 NA chr15 85415228 85415633 + 406 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2262B20.1 NA 0.176 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CTA-254O6.1 NA chr7 87109539 87111282 + 1744 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTA-254O6.1 NA 0.024 50-60% Pituitary 3.141445124 PAAD NA NA boxplot RP11-717A5.2 NA chr2 85387074 85387146 - 73 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-717A5.2 NA 0.024 80-90% NA NA CRC NA NA boxplot RP11-690I21.3 NA chr2 231810348 231810844 - 497 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-690I21.3 NA 0.012 80-90% NA NA Normal NA NA boxplot RP11-2L8.1 NA chr3 177934823 177937662 + 2840 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-2L8.1 NA 0.024 60-70% NA NA Breast_cancer,HCC NA NA boxplot RP11-575G13.2 NA chr12 100578744 100580197 + 1454 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-575G13.2 NA 0.082 30-40% Nerve 3.185921308 CRC,HCC,Normal,PAAD NA NA boxplot RP11-318E3.9 NA chr10 5813985 5814441 + 457 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-318E3.9 NA 0.259 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-92F20.1 NA chr2 224464682 224474500 + 9819 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-92F20.1 NA 0.129 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-589N15.2 NA chr8 11846154 11846391 - 238 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-589N15.2 NA 0.129 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot ADGRL3-AS1 adhesion G protein-coupled receptor L3 antisense RNA 1 chr4 62071752 62165554 - 93803 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ADGRL3-AS1 NA 0.012 50-60% NA NA CRC NA NA boxplot RP11-407N17.5 NA chr14 39265703 39267061 - 1359 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-407N17.5 NA 0.282 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot MTATP6P22 mitochondrially encoded ATP synthase 6 pseudogene 22 chr3 106897671 106898268 - 598 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MTATP6P22 NA 0.012 80-90% NA NA NA NA NA boxplot RP11-521B24.5 NA chr14 105467793 105470617 - 2825 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-521B24.5 NA 0.153 70-80% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CTD-3006G17.2 NA chr14 27258717 27845286 - 586570 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-3006G17.2 exo_circ_040029 0.047 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP5-827C21.2 NA chr1 234357006 234365828 + 8823 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-827C21.2 NA 0.153 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot AC003664.1 NA chr17 13299184 13306760 - 7577 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC003664.1 NA 0.012 20-30% Testis 4.906892038 Breast_cancer,PAAD NA NA boxplot RP11-169K16.8 NA chr1 15828232 15828669 + 438 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-169K16.8 NA 0.012 50-60% NA NA Normal,PAAD NA NA boxplot RP11-346D6.4 NA chr10 52389112 52389488 - 377 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-346D6.4 exo_circ_028226 0.059 90-100% Testis 4.906892038 HCC,Normal NA NA boxplot RP11-193I22.2 NA chr3 42051181 42051694 - 514 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-193I22.2 NA 0.012 80-90% NA NA Normal NA NA boxplot RP11-227F19.5 NA chr4 41688858 41692797 - 3940 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-227F19.5 NA 0.012 80-90% Testis 1.285343298 NA NA NA boxplot AC104655.3 NA chr2 105144113 105145424 + 1312 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC104655.3 NA 0.2 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot MED4-AS1 MED4 antisense RNA 1 chr13 48077137 48079991 + 2855 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MED4-AS1 NA 0.541 50-60% Lung 3.251383462 CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP1-309F20.3 NA chr20 58863528 58888809 - 25282 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-309F20.3 NA 0.176 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot SHANK2-AS3 SHANK2 antisense RNA 3 chr11 70862790 70865115 + 2326 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SHANK2-AS3 NA 0.012 40-50% NA NA Breast_cancer,HCC NA NA boxplot GAS1RR GAS1 adjacent regulatory RNA chr9 86948699 87002033 + 53335 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GAS1RR NA 0.129 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RPL7L1P9 ribosomal protein L7 like 1 pseudogene 9 chr2 217760547 217761291 - 745 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL7L1P9 NA 0.024 30-40% NA NA CRC NA NA boxplot RP11-70D24.1 NA chr16 79675685 79677715 - 2031 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-70D24.1 NA 0.012 50-60% NA NA CRC NA NA boxplot CTC-429P9.2 NA chr19 16610411 16636531 + 26121 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-429P9.2 NA 0.024 60-70% NA NA Normal NA NA boxplot RP11-173D3.4 NA chr15 20141794 20146430 + 4637 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-173D3.4 NA 0.012 70-80% NA NA Breast_cancer,CRC NA NA boxplot AC012065.5 NA chr2 20606280 20606654 - 375 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC012065.5 NA 0.094 10-20% NA NA CRC,Normal,PAAD NA NA boxplot FAM27E3 family with sequence similarity 27 member E3 chr9 67717411 67719178 - 1768 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FAM27E3 NA 0.506 20-30% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD PAAD(up) NA boxplot RP11-742B18.1 NA chr4 87568035 87733956 - 165922 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-742B18.1 NA 0.024 50-60% Testis 3.601588051 Breast_cancer,HCC NA NA boxplot RP11-834C11.11 NA chr12 54145069 54147225 - 2157 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-834C11.11 NA 0.035 50-60% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot GCSAML-AS1 GCSAML antisense RNA 1 chr1 247524679 247526752 - 2074 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GCSAML-AS1 NA 0.094 20-30% Testis 1.8496894 CRC,HCC,Normal,PAAD NA NA boxplot ATXN2-AS NA chr12 111599498 111600256 + 759 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ATXN2-AS exo_circ_056485 0.106 80-90% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-667K14.5 NA chr17 2089681 2101560 + 11880 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-667K14.5 NA 0.024 30-40% NA NA Normal,PAAD NA NA boxplot RP11-963H4.5 NA chr17 10792059 10794985 + 2927 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-963H4.5 NA 0.012 80-90% Testis 2.694791855 CRC NA NA boxplot RP11-369K17.1 NA chr8 120913065 121119754 + 206690 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-369K17.1 NA 0.047 70-80% Muscle 4.906892038 CRC,Normal NA NA boxplot RP11-424N24.2 NA chr3 44337941 44338552 - 612 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-424N24.2 NA 0.024 80-90% NA NA Breast_cancer,Normal,PAAD NA NA boxplot RPL12P5 ribosomal protein L12 pseudogene 5 chr14 30791098 30791489 + 392 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL12P5 NA 0.024 0-10% NA NA CRC,PAAD NA NA boxplot TUBBP5 tubulin beta pseudogene 5 chr9 138150075 138177433 + 27359 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TUBBP5 NA 0.118 20-30% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot CBX1P3 chromobox 1 pseudogene 3 chr1 203954640 203955780 + 1141 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CBX1P3 NA 0.012 20-30% NA NA Breast_cancer,Normal NA NA boxplot CYP4F26P cytochrome P450 family 4 subfamily F member 26, pseudogene chr9 33580695 33605293 + 24599 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CYP4F26P NA 0.035 0-10% NA NA Breast_cancer,PAAD NA NA boxplot RP11-879F14.2 NA chr18 61585746 61606916 - 21171 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-879F14.2 NA 0.882 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down),HCC(down) NA boxplot RP11-244N9.4 NA chr9 97634515 97636051 - 1537 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-244N9.4 NA 0.071 30-40% NA NA Normal,PAAD NA NA boxplot RP11-114G22.1 NA chr12 22699859 23174125 + 474267 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-114G22.1 NA 0.035 80-90% Pituitary 3.682418203 Breast_cancer,HCC,PAAD NA NA boxplot RP4-614C10.2 NA chr2 89542842 89585652 - 42811 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-614C10.2 NA 0.6 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP4-534N18.2 NA chr1 31933020 31933975 + 956 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-534N18.2 NA 0.024 40-50% NA NA HCC,Normal NA NA boxplot RP1-228P16.8 NA chr12 48039784 48040761 - 978 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-228P16.8 NA 0.176 70-80% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP5-965G21.6 NA chr20 25284915 25285588 - 674 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-965G21.6 NA 0.024 20-30% NA NA Breast_cancer,CRC,Normal NA NA boxplot OR2A20P olfactory receptor family 2 subfamily A member 20 pseudogene chr7 144250045 144252957 - 2913 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=OR2A20P NA 0.318 50-60% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot TMEM14DP transmembrane protein 14D, pseudogene chr10 68544489 68544833 - 345 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TMEM14DP NA 0.141 80-90% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CTD-2192D1.2 NA chr7 76960571 76978658 + 18088 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2192D1.2 NA 0.165 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RBM48P1 RNA binding motif protein 48 pseudogene 1 chr4 126563509 126564776 + 1268 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RBM48P1 NA 0.024 90-100% NA NA HCC,Normal NA NA boxplot ST13P20 suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein) pseudogene 20 chr1 81721693 81723068 + 1376 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ST13P20 NA 0.059 60-70% NA NA CRC,Normal NA NA boxplot CTD-2616J11.9 NA chr19 51345169 51353293 + 8125 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2616J11.9 NA 0.412 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-133M8.3 NA chr16 78872739 78873505 + 767 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-133M8.3 NA 0.024 70-80% NA NA Breast_cancer,Normal NA NA boxplot RP11-338E21.1 NA chr12 64599078 64609459 - 10382 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-338E21.1 NA 0.024 80-90% NA NA Breast_cancer,Normal NA NA boxplot AC007228.11 NA chr19 56545566 56567411 - 21846 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC007228.11 NA 0.318 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-425D10.10 NA chr6 109382795 109383666 + 872 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-425D10.10 NA 0.071 80-90% NA NA CRC,HCC,Normal NA NA boxplot AC027612.1 NA chr2 91747940 91748986 - 1047 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC027612.1 NA 0.859 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),PAAD(down) NA boxplot ZNF602P zinc finger protein 602, pseudogene chr6 28115628 28116551 + 924 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ZNF602P NA 0.012 80-90% NA NA HCC NA NA boxplot AC008440.5 NA chr19 53874626 53876049 - 1424 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC008440.5 NA 0.329 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-134K13.4 NA chr6 70596438 70596980 + 543 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-134K13.4 NA 0.094 40-50% NA NA CRC,HCC,Normal NA NA boxplot AF196972.3 NA chrX 48433201 48441619 + 8419 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AF196972.3 NA 0.012 40-50% NA NA PAAD NA NA boxplot NR2F2-AS1 NR2F2 antisense RNA 1 chr15 96110040 96327361 - 217322 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NR2F2-AS1 exo_circ_057301,exo_circ_028725,exo_circ_028726 0.435 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot OLA1P1 Obg-like ATPase 1 pseudogene 1 chr22 42107765 42108953 - 1189 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=OLA1P1 NA 0.976 0-10% NA NA CHD,CRC,HCC,Normal,PAAD CHD(down),CRC(down) NA boxplot CTD-2537O9.1 NA chr11 84720826 84800701 + 79876 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2537O9.1 NA 0.012 50-60% Pituitary 4.34599742 Normal NA NA boxplot PDIA3P1 protein disulfide isomerase family A member 3 pseudogene 1 chr1 147178113 147179622 + 1510 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PDIA3P1 NA 1 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-389O22.4 NA chr1 113168994 113169403 + 410 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-389O22.4 NA 0.012 40-50% NA NA Breast_cancer NA NA boxplot RP11-227H15.5 NA chr10 69265342 69268148 - 2807 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-227H15.5 NA 0.012 80-90% NA NA HCC,Normal NA NA boxplot RP5-1021I20.2 NA chr14 73822559 73830135 - 7577 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-1021I20.2 NA 0.012 80-90% Kidney 3.533918841 NA NA NA boxplot GSTT2 glutathione S-transferase theta 2 (gene/pseudogene) chr22 23980058 23983915 + 3858 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GSTT2 NA 0.212 60-70% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-574F21.2 NA chr1 160261744 160262778 + 1035 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-574F21.2 NA 0.318 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CTC-277H1.7 NA chr16 67261108 67263784 + 2677 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-277H1.7 NA 0.176 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP5-1069C8.2 NA chr20 12865202 12952519 - 87318 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-1069C8.2 NA 0.024 40-50% Testis 4.304829467 Breast_cancer,HCC NA NA boxplot RP11-281P23.2 NA chr4 11625714 11813958 + 188245 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-281P23.2 NA 0.035 10-20% Testis 3.733516877 HCC,Normal NA NA boxplot AC005537.2 NA chr7 42954135 43113931 - 159797 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC005537.2 NA 0.035 20-30% NA NA Breast_cancer,HCC,PAAD NA NA boxplot BIN2P1 bridging integrator 2 pseudogene 1 chr4 82275071 82276600 + 1530 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=BIN2P1 NA 0.718 70-80% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot PSORS1C3 psoriasis susceptibility 1 candidate 3 (non-protein coding) chr6 31173735 31177899 - 4165 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PSORS1C3 NA 0.047 80-90% Bladder 1.130283772 Breast_cancer,HCC,PAAD NA NA boxplot AC004840.8 NA chr7 2383698 2388652 + 4955 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC004840.8 exo_circ_035896,exo_circ_013094,exo_circ_000580,exo_circ_050024 0.047 50-60% Testis 4.082944971 Breast_cancer,CRC,Normal,PAAD NA NA boxplot TCF3P1 transcription factor 3 pseudogene 1 chr9 5110913 5112849 + 1937 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TCF3P1 NA 0.212 40-50% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot AP000696.2 NA chr21 36632681 36637033 - 4353 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AP000696.2 NA 0.012 20-30% Kidney 2.56441389 Normal NA NA boxplot RP4-549F15.1 NA chr1 7441096 7441554 - 459 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-549F15.1 NA 0.035 20-30% Spleen 2.805367442 CRC,Normal,PAAD NA NA boxplot RP11-354E23.4 NA chr10 72756398 72757016 + 619 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-354E23.4 NA 0.059 40-50% NA NA CRC,Normal NA NA boxplot RP11-407G23.1 NA chr16 57091213 57092303 - 1091 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-407G23.1 NA 0.012 10-20% Testis 4.906892038 CRC,Normal NA NA boxplot RP11-321F6.2 NA chr15 66740445 66741151 + 707 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-321F6.2 NA 0.012 30-40% NA NA Breast_cancer NA NA boxplot AC005740.6 NA chr5 141952419 141953375 + 957 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC005740.6 NA 0.071 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-264M12.2 NA chr16 77741468 77743000 - 1533 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-264M12.2 NA 0.153 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot FAM74A1 family with sequence similarity 74 member A1 chr9 39371065 39376916 + 5852 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FAM74A1 NA 0.071 60-70% Testis 4.906892038 CRC,HCC,Normal,PAAD NA NA boxplot NALCN-AS1 NALCN antisense RNA 1 chr13 100708325 101059286 + 350962 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NALCN-AS1 NA 0.035 80-90% NA NA Breast_cancer,HCC,PAAD NA NA boxplot EEF1B2P1 eukaryotic translation elongation factor 1 beta 2 pseudogene 1 chr15 52505191 52505862 + 672 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=EEF1B2P1 NA 0.129 90-100% NA NA CHD,CRC,Normal,PAAD NA NA boxplot BACH1-AS1 BACH1 antisense RNA 1 chr21 29370019 29376339 - 6321 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=BACH1-AS1 NA 0.035 90-100% NA NA Breast_cancer,Normal NA NA boxplot C9orf170 chromosome 9 open reading frame 170 chr9 87148644 87159556 + 10913 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=C9orf170 NA 0.024 10-20% NA NA Breast_cancer,Normal NA NA boxplot RPL31P58 ribosomal protein L31 pseudogene 58 chr17 28802444 28802822 + 379 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL31P58 NA 0.024 90-100% Brain 4.906892038 CRC NA NA boxplot CH17-408M7.1 uncharacterized LOC102724558 chr1 146514471 146525289 + 10819 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CH17-408M7.1 NA 0.024 70-80% NA NA HCC NA NA boxplot ARMC2-AS1 ARMC2 antisense RNA 1 chr6 108922976 108924103 - 1128 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ARMC2-AS1 exo_circ_027791 0.012 0-10% NA NA Normal NA NA boxplot PCAT19 prostate cancer associated transcript 19 (non-protein coding) chr19 41454169 41500649 - 46481 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PCAT19 NA 1 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CRC(down) NA boxplot AC010084.1 NA chrY 4036497 4100320 + 63824 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC010084.1 NA 0.494 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-49K24.8 NA chr18 47105946 47108062 + 2117 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-49K24.8 NA 0.071 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-6F2.5 NA chr3 157081841 157088547 + 6707 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-6F2.5 NA 0.024 60-70% Testis 4.107727525 Breast_cancer,HCC,Normal NA NA boxplot AC111200.7 NA chr2 86930250 86930754 - 505 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC111200.7 NA 0.318 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot MMP25-AS1 MMP25 antisense RNA 1 chr16 3051096 3059370 - 8275 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MMP25-AS1 NA 0.882 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down) NA boxplot INE2 inactivation escape 2 (non-protein coding) chrX 15785716 15787589 - 1874 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=INE2 NA 0.165 10-20% NA NA Normal,PAAD NA NA boxplot VN1R105P vomeronasal 1 receptor 105 pseudogene chr19 54647944 54648853 + 910 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=VN1R105P NA 0.776 20-30% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up) NA boxplot RP11-297J22.1 NA chr2 120866378 120867403 - 1026 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-297J22.1 NA 0.012 80-90% NA NA Breast_cancer NA NA boxplot AGPAT4-IT1 AGPAT4 intronic transcript 1 chr6 161160105 161161982 - 1878 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AGPAT4-IT1 NA 0.129 70-80% NA NA Breast_cancer,CRC,Normal,PAAD NA NA boxplot RP11-791G16.4 NA chr4 82580117 82581384 - 1268 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-791G16.4 NA 0.682 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-197P3.5 NA chr9 75009828 75016036 - 6209 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-197P3.5 NA 0.106 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot TDH L-threonine dehydrogenase (pseudogene) chr8 11339637 11368452 + 28816 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TDH NA 0.094 20-30% Pancreas 1.578013109 CRC,Normal,PAAD NA NA boxplot RP11-16F15.2 NA chr11 9660438 9660920 + 483 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-16F15.2 NA 0.929 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(up),HCC(up),PAAD(up) NA boxplot LINC01006 long intergenic non-protein coding RNA 1006 chr7 156472196 156640654 - 168459 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01006 NA 0.788 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down) NA boxplot RP11-307C18.1 NA chr7 98322853 98323430 + 578 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-307C18.1 NA 0.094 40-50% NA NA HCC,Normal,PAAD NA NA boxplot EEF1DP7 eukaryotic translation elongation factor 1 delta pseudogene 7 chr17 63636601 63637113 + 513 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=EEF1DP7 NA 0.188 30-40% NA NA CRC,HCC,Normal NA NA boxplot RP11-153M7.1 NA chr4 153658572 153659653 + 1082 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-153M7.1 NA 0.082 80-90% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-321N4.4 NA chr6 85498441 85499058 - 618 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-321N4.4 NA 0.071 20-30% NA NA CRC,Normal,PAAD NA NA boxplot RPS3AP29 ribosomal protein S3a pseudogene 29 chr7 97898347 97899115 - 769 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPS3AP29 NA 0.071 80-90% Testis 2.873726686 CRC,Normal,PAAD NA NA boxplot RP11-585P4.6 NA chr12 75333798 75334486 - 689 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-585P4.6 NA 0.282 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot NPAP1P2 nuclear pore associated protein 1 pseudogene 2 chr10 79860573 79861806 + 1234 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NPAP1P2 NA 0.035 50-60% Testis 4.906892038 HCC,Normal NA NA boxplot RP11-144G6.4 NA chr10 47496212 47502195 + 5984 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-144G6.4 NA 0.012 90-100% NA NA CRC NA NA boxplot AP001062.8 NA chr21 44328944 44330221 - 1278 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AP001062.8 NA 0.529 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot MSNP1 moesin pseudogene 1 chr5 25909503 25911234 + 1732 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MSNP1 NA 1 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up) NA boxplot AP001258.4 NA chr11 59130133 59143015 - 12883 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AP001258.4 NA 0.882 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(down) NA boxplot RP11-256L11.3 NA chr12 109445410 109447497 - 2088 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-256L11.3 NA 0.235 60-70% Testis 1.869164486 CRC,HCC,Normal,PAAD NA NA boxplot RP11-129B9.2 NA chr12 95100531 95101045 + 515 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-129B9.2 NA 0.012 80-90% NA NA CRC NA NA boxplot RPS24P8 ribosomal protein S24 pseudogene 8 chr3 45159774 45160175 - 402 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPS24P8 NA 0.882 60-70% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot AP000620.1 NA chr11 100666459 100666962 + 504 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AP000620.1 NA 0.024 70-80% Testis 4.906892038 Normal,PAAD NA NA boxplot MINOS1P2 mitochondrial inner membrane organizing system 1 pseudogene 2 chr17 64747264 64747492 - 229 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MINOS1P2 NA 0.071 90-100% Testis 4.906892038 CRC,HCC,Normal NA NA boxplot RP11-264L1.2 NA chr16 78550739 78553296 - 2558 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-264L1.2 NA 0.012 90-100% NA NA Breast_cancer,HCC,PAAD NA NA boxplot RP3-508I15.20 NA chr22 38736610 38736792 - 183 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-508I15.20 NA 0.212 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC002511.2 NA chr19 35424062 35424652 - 591 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC002511.2 NA 0.047 70-80% NA NA HCC,Normal,PAAD NA NA boxplot CTC-308K20.4 NA chr5 172986680 172987198 + 519 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-308K20.4 NA 0.153 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot GS1-57L11.1 NA chr8 2727318 2822482 + 95165 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GS1-57L11.1 NA 0.153 20-30% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot RP5-1113E3.3 NA chr1 10458555 10459338 + 784 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-1113E3.3 NA 0.059 50-60% NA NA HCC,Normal,PAAD NA NA boxplot RP4-694A7.2 NA chr1 68479129 68483539 + 4411 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-694A7.2 NA 0.082 60-70% Testis 2.573214311 Breast_cancer,HCC,Normal,PAAD NA NA boxplot RP11-44N11.2 NA chr8 122779971 122780830 - 860 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-44N11.2 NA 0.012 90-100% NA NA NA NA NA boxplot ACTG1P1 actin gamma 1 pseudogene 1 chr3 139493809 139494937 + 1129 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ACTG1P1 NA 0.224 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CTC-471J1.8 NA chr19 52130548 52171533 - 40986 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-471J1.8 NA 0.753 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP1-101A2.1 NA chr20 46681676 46682375 - 700 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-101A2.1 NA 0.353 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CH17-472G23.1 NA chr1 120197085 120319680 + 122596 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CH17-472G23.1 NA 0.318 70-80% NA NA CRC,HCC,Normal,PAAD NA NA boxplot AC018890.6 NA chr2 174547141 174774827 + 227687 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC018890.6 NA 0.059 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-70D24.4 NA chr16 79619469 79620110 + 642 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-70D24.4 NA 0.012 60-70% NA NA CRC NA NA boxplot RP11-343H5.6 NA chr1 206634649 206635622 - 974 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-343H5.6 NA 0.035 70-80% Testis 4.518792145 Breast_cancer,HCC NA NA boxplot CALM2P2 calmodulin 2 pseudogene 2 chr10 70163685 70164124 + 440 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CALM2P2 NA 0.953 0-10% NA NA CHD,CRC,HCC,Normal,PAAD CHD(down) NA boxplot AC144530.1 NA chr3 197850400 197850954 - 555 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC144530.1 NA 0.929 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),PAAD(down) NA boxplot AC055764.1 NA chr3 197830685 197831296 - 612 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC055764.1 NA 0.388 30-40% Testis 3.833058857 CRC,HCC,Normal,PAAD NA NA boxplot RP11-56L13.1 NA chr16 32262827 32265514 - 2688 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-56L13.1 NA 0.012 0-10% Testis 4.569629439 Breast_cancer,Normal NA NA boxplot NEPNP nephrocan, pseudogene chr6 117633706 117645087 + 11382 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NEPNP NA 0.024 70-80% NA NA CRC,PAAD NA NA boxplot LLNLR-285B5.1 NA chr19 56485923 56494280 - 8358 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LLNLR-285B5.1 NA 0.071 70-80% NA NA HCC,Normal,PAAD NA NA boxplot RP11-297C4.2 NA chr16 30477180 30489353 - 12174 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-297C4.2 NA 0.459 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-586K12.10 NA chr16 32663925 32666533 + 2609 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-586K12.10 NA 0.012 90-100% Testis 4.906892038 Normal NA NA boxplot XXbac-B444P24.10 NA chr22 20299760 20313216 + 13457 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=XXbac-B444P24.10 NA 0.024 70-80% NA NA Breast_cancer,CRC,HCC NA NA boxplot RP11-63N3.1 NA chr18 77622552 77624515 + 1964 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-63N3.1 NA 0.012 90-100% NA NA Normal NA NA boxplot GBAP1 glucosidase, beta, acid pseudogene 1 chr1 155213821 155227422 - 13602 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GBAP1 NA 0.659 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD PAAD(up) NA boxplot RP11-250B2.4 NA chr6 80440730 80441172 + 443 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-250B2.4 NA 0.082 60-70% NA NA CRC,HCC,Normal NA NA boxplot TTC39C-AS1 TTC39C antisense RNA 1 chr18 23994213 24015339 - 21127 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TTC39C-AS1 NA 0.071 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP1-90G24.6 NA chr22 32273420 32277186 + 3767 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-90G24.6 NA 0.118 20-30% Prostate 2.353595699 CRC,HCC,Normal,PAAD NA NA boxplot ST13P4 suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein) pseudogene 4 chr13 50172089 50173181 + 1093 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ST13P4 NA 1 0-10% NA NA CHD,CRC,HCC,Normal,PAAD CHD(down) NA boxplot CH17-248H7.2 NA chr1 144168752 144168850 + 99 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CH17-248H7.2 NA 0.024 90-100% NA NA CRC,Normal NA NA boxplot CTC-575D19.1 NA chr5 168616352 168616996 + 645 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-575D19.1 NA 0.929 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down) NA boxplot RP11-313F23.4 NA chr12 34191279 34218853 - 27575 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-313F23.4 NA 0.188 10-20% Testis 2.511628424 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-567J20.2 NA chr8 48551527 48556441 - 4915 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-567J20.2 NA 0.306 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-351C21.2 NA chr12 42361267 42361703 + 437 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-351C21.2 NA 0.047 30-40% NA NA HCC,Normal,PAAD NA NA boxplot RP1-12G14.7 NA chr6 149591755 149592663 - 909 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-12G14.7 NA 0.024 0-10% NA NA HCC,Normal NA NA boxplot NDUFB4P12 NADH:ubiquinone oxidoreductase subunit B4 pseudogene 12 chr4 43898962 43899351 + 390 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NDUFB4P12 NA 0.541 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot KIZ-AS1 KIZ antisense RNA 1 chr20 21154023 21218289 - 64267 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KIZ-AS1 NA 0.012 50-60% NA NA Breast_cancer,CRC,HCC NA NA boxplot PGAM1P7 phosphoglycerate mutase 1 pseudogene 7 chrX 46646594 46647330 - 737 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PGAM1P7 NA 0.082 60-70% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-535C21.3 NA chr9 97986551 97987656 - 1106 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-535C21.3 NA 0.012 20-30% Testis 2.668034303 HCC,Normal NA NA boxplot RP11-702H23.2 NA chr11 74485580 74486051 - 472 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-702H23.2 NA 0.094 10-20% NA NA CRC,Normal,PAAD NA NA boxplot RP11-46H11.11 NA chr12 132865855 132867958 - 2104 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-46H11.11 NA 0.165 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-112L6.2 NA chr20 50166362 50171742 + 5381 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-112L6.2 NA 0.059 80-90% Testis 4.832654277 Normal NA NA boxplot PCMTD1P3 protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1 pseudogene 3 chr7 23721311 23721782 - 472 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PCMTD1P3 NA 0.012 50-60% NA NA HCC NA NA boxplot AC019172.2 NA chr2 3844184 3847411 + 3228 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC019172.2 NA 0.024 50-60% NA NA Breast_cancer,Normal NA NA boxplot RP11-1006G14.2 NA chr15 72608481 72636919 - 28439 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1006G14.2 NA 0.035 60-70% Testis 3.658763766 Breast_cancer,Normal NA NA boxplot RP11-195B17.1 NA chr2 27062428 27062907 - 480 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-195B17.1 NA 0.082 20-30% NA NA CRC,HCC,Normal NA NA boxplot RP11-157L3.12 NA chr9 41657708 41699072 - 41365 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-157L3.12 NA 0.012 90-100% NA NA Breast_cancer NA NA boxplot RP11-394I13.3 NA chr2 174011856 174012975 - 1120 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-394I13.3 exo_circ_053593 0.035 50-60% NA NA CRC,Normal,PAAD NA NA boxplot RP11-281O15.4 NA chr5 178969390 178990116 + 20727 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-281O15.4 NA 0.035 20-30% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot HOMER2P1 homer scaffolding protein 2 pseudogene 1 chr14 106460092 106461055 - 964 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HOMER2P1 NA 0.118 70-80% Testis 4.906892038 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-254F19.4 NA chr16 84917377 84919923 - 2547 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-254F19.4 NA 0.012 90-100% NA NA Breast_cancer,Normal NA NA boxplot AC007386.3 NA chr2 64960053 64960634 - 582 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC007386.3 NA 0.047 30-40% NA NA Normal,PAAD NA NA boxplot LINC00987 long intergenic non-protein coding RNA 987 chr12 9240003 9243052 + 3050 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00987 NA 0.965 0-10% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-367H1.1 NA chr2 241581922 241582726 + 805 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-367H1.1 NA 0.012 30-40% NA NA CRC NA NA boxplot RP11-156P1.3 NA chr17 46984045 47100323 - 116279 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-156P1.3 NA 0.929 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-345I18.4 NA chr1 179220938 179222125 + 1188 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-345I18.4 NA 0.024 70-80% Brain 4.906892038 Normal NA NA boxplot RP13-923O23.7 NA chr8 81696368 81698694 + 2327 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP13-923O23.7 NA 0.035 0-10% NA NA Breast_cancer,Normal NA NA boxplot PSMG3-AS1 PSMG3 antisense RNA 1 (head to head) chr7 1570073 1589626 + 19554 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PSMG3-AS1 NA 0.918 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down) NA boxplot GGT3P gamma-glutamyltransferase 3 pseudogene chr22 18773665 18843399 - 69735 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GGT3P NA 0.035 90-100% NA NA Breast_cancer,HCC,Normal NA NA boxplot LINC01518 long intergenic non-protein coding RNA 1518 chr10 42674197 42691723 - 17527 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01518 NA 0.047 60-70% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot AP000357.4 NA chr22 24686923 24688087 + 1165 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AP000357.4 NA 0.071 80-90% Testis 4.906892038 CRC,Normal NA NA boxplot RP11-311F12.2 NA chr17 19737682 19738542 + 861 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-311F12.2 NA 0.012 80-90% Testis 3.140327825 Breast_cancer,HCC NA NA boxplot AC087491.2 NA chr17 39619613 39622513 + 2901 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC087491.2 NA 0.012 90-100% Skin 1.066451363 Breast_cancer NA NA boxplot AC007128.1 NA chr7 8262264 8344516 + 82253 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC007128.1 NA 0.271 40-50% NA NA HCC,Normal,PAAD NA NA boxplot AC034228.4 NA chr5 131944408 131968220 + 23813 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC034228.4 NA 0.024 90-100% Testis 3.707895609 Breast_cancer,CRC,HCC,Normal NA NA boxplot RP11-522M21.2 NA chr1 245614773 245615145 - 373 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-522M21.2 NA 0.012 90-100% Testis 4.906892038 CRC NA NA boxplot LINC01534 long intergenic non-protein coding RNA 1534 chr19 36685440 36687449 - 2010 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01534 NA 0.659 10-20% NA NA CHD,CRC,HCC,Normal,PAAD HCC(down),PAAD(down) NA boxplot ZFAT-AS1 ZFAT antisense RNA 1 chr8 134598071 134600689 + 2619 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ZFAT-AS1 NA 0.059 50-60% Cervix 4.906892038 Normal NA NA boxplot MIR3681HG MIR3681 host gene chr2 11848622 12578348 + 729727 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MIR3681HG NA 0.188 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot DUXAP1 double homeobox A pseudogene 1 chr2 84750769 84751231 + 463 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DUXAP1 NA 0.071 30-40% Pituitary 1.775462712 CRC,Normal NA NA boxplot AC007560.1 NA chr2 50829442 50829678 - 237 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC007560.1 NA 0.824 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-429P7.1 NA chr2 47989625 47990526 + 902 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-429P7.1 NA 0.012 50-60% NA NA PAAD NA NA boxplot RP11-598D12.1 NA chr16 34013394 34013830 - 437 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-598D12.1 NA 0.012 80-90% NA NA Breast_cancer,Normal NA NA boxplot RP11-573D15.2 NA chr3 186810880 186825521 - 14642 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-573D15.2 NA 0.012 10-20% Brain 1.422588073 Breast_cancer NA NA boxplot AC004461.4 NA chr22 19055801 19056512 + 712 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC004461.4 NA 0.012 80-90% NA NA Breast_cancer NA NA boxplot AL133249.1 NA chr2 31793823 31803980 - 10158 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AL133249.1 NA 0.012 90-100% Testis 4.906892038 Breast_cancer,Normal NA NA boxplot RP11-383J24.1 NA chr8 124271683 124277584 + 5902 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-383J24.1 NA 0.282 40-50% Muscle 3.244813708 CRC,HCC,Normal,PAAD NA NA boxplot FAM74A3 family with sequence similarity 74 member A3 chr9 66976520 66976991 - 472 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FAM74A3 NA 0.024 30-40% Testis 4.090687079 Breast_cancer,HCC,Normal NA NA boxplot CCAT1 colon cancer associated transcript 1 (non-protein coding) chr8 127207866 127219088 - 11223 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CCAT1 exo_circ_004369,exo_circ_015198,exo_circ_010462 0.2 0-10% Esophagus 2.854725624 Breast_cancer,CRC,HCC,Normal,PAAD PAAD(up) NA boxplot RP11-519G16.3 NA chr15 45448427 45513767 + 65341 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-519G16.3 NA 0.082 60-70% NA NA Breast_cancer,CRC,Normal,PAAD NA NA boxplot RP11-673E1.4 NA chr4 143953635 144126359 + 172725 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-673E1.4 exo_circ_015045,exo_circ_027586 0.612 10-20% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down) NA boxplot AC062017.1 NA chr2 239401436 239402364 + 929 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC062017.1 NA 0.2 30-40% Testis 1.51326113 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot LINC00498 long intergenic non-protein coding RNA 498 chr4 138298856 138312658 - 13803 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00498 NA 0.012 80-90% Testis 4.802630483 CRC NA NA boxplot LINC01545 long intergenic non-protein coding RNA 1545 chrX 46887417 46899703 - 12287 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01545 NA 0.082 40-50% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot AC114271.2 NA chr19 10333436 10336248 + 2813 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC114271.2 NA 0.847 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot AF064858.10 NA chr21 39028536 39029128 - 593 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AF064858.10 NA 0.012 90-100% NA NA Breast_cancer NA NA boxplot CTD-2215E18.1 NA chr5 97089075 97437217 + 348143 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2215E18.1 exo_circ_026457,exo_circ_049667,exo_circ_033374,exo_circ_013478,exo_circ_038940,exo_circ_044356,exo_circ_024695,exo_circ_007603 0.906 0-10% Spleen 2.447184814 CRC,HCC,Normal,PAAD CHD(down),CRC(down),PAAD(down) NA boxplot RP11-603J24.6 NA chr12 56118968 56119939 - 972 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-603J24.6 NA 0.035 60-70% NA NA HCC,Normal NA NA boxplot RP11-619A14.2 NA chr11 76190725 76195071 + 4347 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-619A14.2 exo_circ_045337 0.471 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-111J6.2 NA chr2 18547386 18548204 - 819 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-111J6.2 NA 0.047 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-303E16.3 NA chr16 81016792 81035759 - 18968 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-303E16.3 NA 0.047 80-90% Testis 2.750371114 CRC,HCC,Normal NA NA boxplot RP11-128P10.1 NA chr12 107610034 107617721 - 7688 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-128P10.1 NA 0.012 80-90% NA NA Breast_cancer,Normal NA NA boxplot SMG1P7 SMG1 pseudogene 7 chr16 70219574 70246610 - 27037 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SMG1P7 NA 0.918 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down) NA boxplot AKR1D1P1 aldo-keto reductase family 1, member D1 pseudogene 1 chr1 167519536 167520586 + 1051 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AKR1D1P1 NA 0.059 60-70% Spleen 4.000308569 CRC,HCC,Normal NA NA boxplot PLEKHM1P1 pleckstrin homology and RUN domain containing M1 pseudogene 1 chr17 64779259 64837154 - 57896 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PLEKHM1P1 NA 0.929 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(up) NA boxplot RP5-1125A11.7 NA chr20 33985617 33988989 - 3373 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-1125A11.7 NA 0.306 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot LINC01312 long intergenic non-protein coding RNA 1312 chr6 133821147 133851800 + 30654 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01312 NA 0.012 60-70% NA NA HCC NA NA boxplot RP11-99A1.2 NA chr18 54879457 54880809 + 1353 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-99A1.2 exo_circ_042882,exo_circ_052049,exo_circ_037722,exo_circ_035683,exo_circ_005566,exo_circ_014743,exo_circ_057783,exo_circ_040510 0.047 60-70% Testis 3.87956148 CRC,Normal NA NA boxplot RP11-173P15.5 NA chr12 120721507 120723639 - 2133 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-173P15.5 NA 0.118 60-70% NA NA CRC,HCC,Normal NA NA boxplot DNMBP-AS1 DNMBP antisense RNA 1 chr10 99927010 99958381 + 31372 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DNMBP-AS1 NA 0.282 40-50% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot RP11-769O8.3 NA chr18 738058 739662 - 1605 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-769O8.3 NA 0.035 40-50% NA NA HCC,Normal NA NA boxplot RP5-930J4.5 NA chr1 20692734 20694013 - 1280 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-930J4.5 NA 0.024 60-70% NA NA Breast_cancer,PAAD NA NA boxplot RP11-118B22.4 NA chr12 9246497 9257960 + 11464 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-118B22.4 NA 0.529 20-30% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot AC004471.10 NA chr22 19124309 19128449 - 4141 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC004471.10 NA 0.035 60-70% Testis 1.527308166 Breast_cancer,CRC,Normal NA NA boxplot CTD-2231E14.2 NA chr19 16074293 16077395 - 3103 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2231E14.2 NA 0.882 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down) NA boxplot RP11-212I21.2 NA chr16 55426797 55462297 - 35501 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-212I21.2 NA 0.047 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot AC005077.8 NA chr7 76113026 76113400 - 375 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC005077.8 NA 0.024 70-80% NA NA Breast_cancer,Normal NA NA boxplot POM121B POM121 transmembrane nucleoporin B (pseudogene) chr7 73293497 73301161 + 7665 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=POM121B NA 0.976 0-10% NA NA CHD,CRC,HCC,Normal,PAAD CHD(up),CRC(up),HCC(up),PAAD(up) NA boxplot RP11-1260E13.2 NA chr17 352638 357581 + 4944 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1260E13.2 NA 0.024 10-20% NA NA Breast_cancer,HCC,Normal NA NA boxplot RP5-963E22.4 NA chr20 63166797 63180903 - 14107 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-963E22.4 NA 0.035 70-80% Testis 2.535048528 Breast_cancer,CRC,Normal,PAAD NA NA boxplot RP3-329E20.2 NA chr1 21266082 21267251 + 1170 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-329E20.2 NA 0.565 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot PSMB8-AS1 PSMB8 antisense RNA 1 (head to head) chr6 32844086 32846495 + 2410 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PSMB8-AS1 NA 1 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot LINC01602 long intergenic non-protein coding RNA 1602 chr8 57978358 57984126 + 5769 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01602 NA 0.012 50-60% NA NA NA NA NA boxplot CTD-2651B20.6 NA chr15 45200325 45200632 - 308 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2651B20.6 NA 0.024 80-90% NA NA CRC,Normal NA NA boxplot AC004449.6 NA chr19 637105 637537 - 433 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC004449.6 NA 0.012 80-90% NA NA CRC NA NA boxplot HNRNPA1P68 heterogeneous nuclear ribonucleoprotein A1 pseudogene 68 chr1 100941017 100941995 - 979 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HNRNPA1P68 NA 0.035 90-100% NA NA CRC,Normal NA NA boxplot RP11-154D6.1 NA chr6 71221457 71328228 - 106772 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-154D6.1 exo_circ_027867,exo_circ_044494 0.541 20-30% Testis 1.053745358 Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot RP11-829H16.3 NA chr14 30876179 30889808 - 13630 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-829H16.3 NA 0.235 50-60% Testis 2.442385793 CRC,HCC,Normal,PAAD NA NA boxplot RP11-521H3.3 NA chr13 60730176 60733600 + 3425 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-521H3.3 NA 0.024 50-60% NA NA Breast_cancer,PAAD NA NA boxplot RP11-96C23.11 NA chr10 87001636 87009905 + 8270 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-96C23.11 NA 0.294 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-542C16.1 NA chr17 7352687 7354944 - 2258 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-542C16.1 NA 0.188 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-506N2.1 NA chr4 58780626 58984152 - 203527 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-506N2.1 NA 0.012 90-100% Testis 4.906892038 Normal NA NA boxplot CTD-2369P2.4 NA chr19 10259109 10260045 - 937 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2369P2.4 NA 0.141 50-60% NA NA Normal,PAAD NA NA boxplot RP11-161I2.1 NA chr8 18720905 18734405 + 13501 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-161I2.1 NA 0.024 80-90% NA NA PAAD NA NA boxplot CTD-2154B17.2 NA chr5 10676096 10676423 - 328 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2154B17.2 NA 0.035 40-50% NA NA Normal NA NA boxplot RP11-274M17.1 NA chr12 74170445 74171830 + 1386 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-274M17.1 NA 0.012 90-100% Testis 4.906892038 Breast_cancer NA NA boxplot CRYBB2P1 crystallin beta B2 pseudogene 1 chr22 25448105 25520854 + 72750 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CRYBB2P1 NA 0.965 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down) NA boxplot MGC32805 uncharacterized LOC153163 chr5 122436497 122479087 - 42591 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MGC32805 NA 0.047 70-80% NA NA Breast_cancer,CRC,HCC NA NA boxplot KCNIP2-AS1 KCNIP2 antisense RNA 1 chr10 101819078 101828779 + 9702 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KCNIP2-AS1 NA 0.2 30-40% Testis 3.116827874 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-578F21.2 NA chr15 28679405 28682252 - 2848 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-578F21.2 NA 0.012 90-100% NA NA Normal NA NA boxplot SLC7A15P solute carrier family 7 member 15, pseudogene chr2 20386386 20396588 + 10203 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SLC7A15P NA 0.012 80-90% NA NA Breast_cancer,HCC NA NA boxplot RP11-80I15.1 NA chr9 95123521 95123868 + 348 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-80I15.1 NA 0.012 90-100% NA NA NA NA NA boxplot FRMPD3-AS1 FRMPD3 antisense RNA 1 chrX 107512983 107545821 - 32839 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FRMPD3-AS1 NA 0.024 80-90% NA NA CRC,Normal NA NA boxplot RP11-273G15.2 NA chr8 142981738 143018437 - 36700 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-273G15.2 NA 0.647 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-114H23.2 NA chr12 75694010 75698816 - 4807 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-114H23.2 NA 0.012 90-100% NA NA NA NA NA boxplot RP5-940J5.6 NA chr12 6578622 6584739 + 6118 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-940J5.6 NA 0.671 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD PAAD(up) NA boxplot AC092066.1 NA chr19 44664131 44666158 + 2028 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC092066.1 NA 0.129 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-411G7.2 NA chr17 616002 616595 + 594 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-411G7.2 NA 0.012 90-100% NA NA Breast_cancer,Normal,PAAD NA NA boxplot PNPT1P1 polyribonucleotide nucleotidyltransferase 1 pseudogene 1 chr3 3981981 3984295 - 2315 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PNPT1P1 NA 0.071 60-70% NA NA CRC,Normal NA NA boxplot RP11-269F21.2 NA chr4 111804418 111809694 - 5277 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-269F21.2 NA 0.012 60-70% Testis 4.906892038 HCC NA NA boxplot RGMB-AS1 RGMB antisense RNA 1 chr5 98769618 98773469 - 3852 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RGMB-AS1 NA 0.071 50-60% Testis 2.151817842 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CTD-2270F17.1 uncharacterized LOC101928033 chr5 170389493 170422844 + 33352 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2270F17.1 NA 0.012 90-100% Uterus 1.371871935 CRC NA NA boxplot AC116609.2 NA chr2 742488 747767 + 5280 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC116609.2 NA 0.024 30-40% Testis 3.832156687 PAAD NA NA boxplot RP11-817I4.1 NA chr12 32339368 32340724 + 1357 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-817I4.1 NA 0.165 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CTD-2008L17.2 NA chr18 56003613 56191262 - 187650 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2008L17.2 NA 0.141 60-70% Thyroid 2.429990153 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot SLC25A39P1 solute carrier family 25, member 39 pseudogene 1 chr1 202796030 202797094 + 1065 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SLC25A39P1 NA 0.012 0-10% Testis 2.346142603 Breast_cancer,Normal,PAAD NA NA boxplot RP11-262H14.4 NA chr9 62897449 62900104 + 2656 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-262H14.4 NA 0.659 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),HCC(down),PAAD(down) NA boxplot RP11-344N10.5 NA chr10 73098044 73101297 - 3254 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-344N10.5 NA 0.2 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot AC159540.1 NA chr2 97416165 97433527 - 17363 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC159540.1 NA 0.588 0-10% NA NA CRC,HCC,Normal,PAAD CRC(up),PAAD(up) NA boxplot RP11-75I2.3 NA chr1 210678315 210681932 + 3618 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-75I2.3 NA 0.071 40-50% NA NA HCC,Normal NA NA boxplot AL035610.2 NA chr21 28116094 28228667 - 112574 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AL035610.2 NA 0.035 50-60% NA NA Breast_cancer,HCC,PAAD NA NA boxplot RP5-1091N2.9 NA chrX 71183559 71198175 - 14617 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-1091N2.9 NA 0.8 10-20% Spleen 1.437584621 CRC,HCC,Normal,PAAD CHD(down),CRC(up) NA boxplot PTMAP1 prothymosin, alpha pseudogene 1 chr6 30633632 30633956 + 325 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PTMAP1 NA 0.035 40-50% NA NA Breast_cancer,CRC,PAAD NA NA boxplot USP32P2 ubiquitin specific peptidase 32 pseudogene 2 chr17 18511262 18525930 - 14669 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=USP32P2 NA 0.671 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP1-121G13.3 NA chr6 100530276 100531052 + 777 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-121G13.3 NA 0.118 60-70% NA NA HCC,Normal,PAAD NA NA boxplot RP11-43F13.4 NA chr5 1005039 1006623 + 1585 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-43F13.4 NA 0.035 0-10% Testis 1.029274277 Breast_cancer,PAAD NA NA boxplot CTD-3064M3.7 NA chr8 141434545 141437954 + 3410 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-3064M3.7 NA 0.024 10-20% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot TMEM191A transmembrane protein 191A (pseudogene) chr22 20701114 20704606 + 3493 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TMEM191A NA 0.682 30-40% Testis 2.913533997 Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-326I11.4 NA chr4 184506460 184537554 - 31095 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-326I11.4 NA 0.141 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-574K11.5 NA chr10 73813518 73814737 + 1220 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-574K11.5 NA 0.176 70-80% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP1-224A6.9 NA chr1 22100613 22101360 + 748 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-224A6.9 NA 0.059 50-60% NA NA Breast_cancer,CRC,Normal,PAAD NA NA boxplot RP11-360N9.3 NA chr17 67637774 67638973 + 1200 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-360N9.3 NA 0.059 70-80% NA NA CRC,Normal NA NA boxplot CTC-490G23.4 NA chr19 43360685 43368970 - 8286 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-490G23.4 NA 0.012 90-100% NA NA Breast_cancer,HCC NA NA boxplot PAQR9-AS1 PAQR9 antisense RNA 1 chr3 142960650 143001559 + 40910 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PAQR9-AS1 NA 0.165 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-1020A11.1 NA chr3 9935706 9936258 + 553 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1020A11.1 NA 0.059 70-80% NA NA Normal,PAAD NA NA boxplot FAM220CP putative SIPAR-like protein C9orf51-like chr9 97121659 97122489 + 831 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FAM220CP NA 0.012 0-10% Testis 2.524077045 Breast_cancer,Normal NA NA boxplot RP11-461A8.4 NA chr16 3650636 3651703 - 1068 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-461A8.4 NA 0.153 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-152N13.16 NA chr10 73124573 73125532 - 960 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-152N13.16 NA 0.353 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-756A22.7 NA chr13 24933006 24936796 + 3791 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-756A22.7 NA 0.412 70-80% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-288L9.1 NA chr1 27660328 27662722 - 2395 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-288L9.1 NA 0.047 70-80% NA NA CRC,PAAD NA NA boxplot RP11-408P14.1 NA chr4 65573459 65574328 + 870 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-408P14.1 NA 0.929 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down) NA boxplot OFD1P5Y OFD1 pseudogene 5, Y-linked chrY 18582063 18629077 - 47015 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=OFD1P5Y NA 0.012 70-80% NA NA HCC NA NA boxplot AC018693.6 NA chr2 38861720 38863133 + 1414 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC018693.6 NA 0.059 70-80% Testis 4.906892038 Normal,PAAD NA NA boxplot CTD-2165H16.3 NA chr5 14620020 14621313 + 1294 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2165H16.3 NA 0.118 40-50% NA NA CRC,Normal,PAAD NA NA boxplot ENOX1-AS1 ENOX1 antisense RNA 1 chr13 43543918 43548056 + 4139 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ENOX1-AS1 NA 0.012 80-90% NA NA Breast_cancer,HCC NA NA boxplot RP11-321E2.8 NA chr5 17525235 17525829 + 595 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-321E2.8 NA 0.035 10-20% NA NA HCC,PAAD NA NA boxplot RP11-33B1.4 NA chr4 119409333 119410233 + 901 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-33B1.4 NA 0.047 50-60% NA NA Normal,PAAD NA NA boxplot RP1-292B18.4 NA chr6 151088103 151228447 - 140345 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-292B18.4 NA 0.012 50-60% Testis 4.457577438 HCC NA NA boxplot SCAND2P SCAN domain containing 2 pseudogene chr15 84631451 84647478 + 16028 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SCAND2P exo_circ_037622,exo_circ_042765 0.882 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down),HCC(down) NA boxplot RP11-632P5.1 NA chr2 176822030 176823653 + 1624 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-632P5.1 NA 0.012 20-30% NA NA HCC NA NA boxplot RP11-893F2.18 NA chr17 50362967 50365232 - 2266 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-893F2.18 NA 0.165 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-758P17.3 NA chr7 100436204 100438504 + 2301 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-758P17.3 NA 0.294 50-60% Testis 3.936634856 CRC,HCC,Normal,PAAD NA NA boxplot RP11-77O7.1 NA chr2 69594741 69595058 - 318 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-77O7.1 NA 0.024 80-90% NA NA Normal NA NA boxplot LA16c-313D11.9 NA chr16 678504 679777 - 1274 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LA16c-313D11.9 NA 0.012 70-80% Testis 1.102848298 Breast_cancer,PAAD NA NA boxplot ATF4P3 activating transcription factor 4 pseudogene 3 chr17 76225751 76226806 - 1056 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ATF4P3 NA 0.447 80-90% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP3-331H24.7 NA chr6 71373253 71375387 - 2135 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-331H24.7 NA 0.059 20-30% NA NA HCC,PAAD NA NA boxplot CTD-2537I9.13 NA chr19 55670632 55672069 + 1438 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2537I9.13 NA 0.035 70-80% NA NA Breast_cancer,CRC NA NA boxplot RP11-85G20.2 NA chr14 93244010 93244323 + 314 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-85G20.2 NA 0.012 90-100% NA NA CRC NA NA boxplot GS1-115G20.2 NA chr1 184566511 184567835 + 1325 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GS1-115G20.2 NA 0.035 10-20% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot RNF144A-AS1 RNF144A antisense RNA 1 chr2 6912277 6918709 - 6433 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RNF144A-AS1 NA 0.718 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CRC(down) NA boxplot RP11-153M3.1 NA chr12 56511002 56512703 + 1702 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-153M3.1 NA 0.812 20-30% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(down),PAAD(up) NA boxplot RP3-333H23.9 NA chr22 39379610 39380015 + 406 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-333H23.9 NA 0.024 80-90% NA NA Normal NA NA boxplot RP11-495P10.4 NA chr1 148317683 148318013 - 331 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-495P10.4 NA 0.012 90-100% Testis 4.906892038 Breast_cancer,CRC NA NA boxplot AC007405.6 NA chr2 170771113 170778148 + 7036 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC007405.6 NA 0.118 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot KRT18P18 keratin 18 pseudogene 18 chr16 72728616 72729894 + 1279 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KRT18P18 NA 0.024 40-50% Testis 4.906892038 Breast_cancer,PAAD NA NA boxplot RP11-713M15.1 NA chr8 120761253 120776832 + 15580 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-713M15.1 NA 0.106 80-90% Testis 3.172872083 CRC,Normal NA NA boxplot OR4A11P olfactory receptor family 4 subfamily A member 11 pseudogene chr11 55318560 55319465 + 906 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=OR4A11P NA 0.012 90-100% Testis 4.906892038 Breast_cancer,CRC NA NA boxplot RP4-735C1.4 NA chr1 109725820 109775252 + 49433 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-735C1.4 NA 0.012 80-90% NA NA HCC,PAAD NA NA boxplot PROSER2-AS1 PROSER2 antisense RNA 1 chr10 11849608 11894700 - 45093 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PROSER2-AS1 NA 0.576 10-20% Testis 1.658586327 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-363N22.3 NA chr10 971146 988341 - 17196 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-363N22.3 exo_circ_039623 0.106 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-135L13.4 NA chr17 19334308 19336127 - 1820 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-135L13.4 NA 0.247 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot LINC01503 long intergenic non-protein coding RNA 1503 chr9 129332300 129359538 + 27239 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01503 NA 0.812 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-248B24.1 NA chr14 91572444 91575271 - 2828 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-248B24.1 NA 0.024 80-90% NA NA Breast_cancer,HCC,Normal NA NA boxplot CTD-2248H3.1 NA chr5 81242330 81242599 - 270 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2248H3.1 NA 0.047 10-20% NA NA HCC,Normal,PAAD NA NA boxplot RP11-530A18.1 NA chr6 5065795 5066982 - 1188 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-530A18.1 NA 0.071 60-70% NA NA CRC,HCC,Normal NA NA boxplot CTC-499B15.7 NA chr19 11796084 11798598 - 2515 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-499B15.7 NA 0.012 50-60% Testis 3.006926388 Breast_cancer,CRC NA NA boxplot RP11-165A20.3 NA chr10 24953241 24953513 + 273 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-165A20.3 exo_circ_022453 0.235 70-80% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-5G9.5 NA chr13 43877715 43878163 - 449 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-5G9.5 NA 0.012 70-80% NA NA NA NA NA boxplot CARS-AS1 CARS antisense RNA 1 chr11 3029009 3041260 + 12252 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CARS-AS1 NA 0.188 50-60% Testis 2.66033116 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC007272.3 NA chr2 201102089 201102957 - 869 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC007272.3 NA 0.012 60-70% NA NA CRC NA NA boxplot CTA-113A6.1 NA chr16 24098239 24099971 + 1733 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTA-113A6.1 NA 0.106 50-60% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot RP11-261P9.4 NA chr20 58710795 58711633 + 839 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-261P9.4 NA 0.024 70-80% NA NA Breast_cancer,Normal NA NA boxplot C17orf102 chromosome 17 open reading frame 102 chr17 34574123 34579369 - 5247 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=C17orf102 NA 0.012 40-50% Brain 3.789784537 Breast_cancer,HCC NA NA boxplot RAB11FIP1P1 RAB11 family interacting protein 1 (class I) pseudogene 1 chrX 74202834 74204595 + 1762 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RAB11FIP1P1 NA 0.176 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot SCML2P2 SCML2 pseudogene 2 chr16 25069570 25070109 + 540 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SCML2P2 NA 0.153 50-60% NA NA CRC,HCC,Normal NA NA boxplot RP11-360F5.3 NA chr4 39133913 39135608 + 1696 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-360F5.3 NA 0.541 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot DNAJC9-AS1 DNAJC9 antisense RNA 1 chr10 73252791 73254349 + 1559 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DNAJC9-AS1 NA 0.471 20-30% Testis 1.057219517 Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-84A14.4 NA chr1 9942923 9949974 + 7052 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-84A14.4 NA 0.176 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot FDPSP8 farnesyl diphosphate synthase pseudogene 8 chr1 211660189 211661277 - 1089 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FDPSP8 NA 0.012 30-40% Testis 4.906892038 Breast_cancer NA NA boxplot GUSBP2 glucuronidase, beta pseudogene 2 chr6 26871484 26956554 - 85071 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GUSBP2 NA 0.682 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD HCC(up),PAAD(up) NA boxplot RP11-245J9.5 NA chr3 64008082 64008692 - 611 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-245J9.5 NA 0.129 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot AC007879.4 NA chr2 207226949 207228308 + 1360 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC007879.4 NA 0.047 70-80% Testis 1.336694521 HCC,Normal NA NA boxplot AC078883.3 NA chr2 172464262 172466022 - 1761 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC078883.3 NA 0.918 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot TAS2R6P taste 2 receptor member 6 pseudogene chr7 141787815 141788640 + 826 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TAS2R6P NA 0.059 50-60% NA NA CRC,Normal NA NA boxplot IARS2P1 isoleucyl-tRNA synthetase 2, mitochondrial pseudogene 1 chr8 87598462 87601634 - 3173 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=IARS2P1 NA 0.012 90-100% NA NA Breast_cancer NA NA boxplot RPL7AP30 ribosomal protein L7a pseudogene 30 chr4 112788083 112788878 - 796 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL7AP30 NA 0.976 10-20% NA NA CHD,CRC,HCC,Normal,PAAD PAAD(down) NA boxplot RP11-571L19.7 NA chr4 98928897 98994994 + 66098 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-571L19.7 NA 0.071 80-90% Testis 4.39258807 CRC,HCC,Normal NA NA boxplot CTD-2095E4.4 NA chr17 32178946 32180074 - 1129 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2095E4.4 NA 0.024 80-90% NA NA Breast_cancer,Normal NA NA boxplot AGGF1P2 angiogenic factor with G-patch and FHA domains 1 pseudogene 2 chr10 133640789 133642894 + 2106 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AGGF1P2 NA 0.412 20-30% Testis 1.153318584 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-365N19.2 NA chr14 102933574 102937177 + 3604 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-365N19.2 NA 0.271 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC027601.1 NA chr17 81228707 81233983 + 5277 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC027601.1 NA 0.353 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-845M18.6 NA chr12 52306616 52308371 - 1756 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-845M18.6 NA 0.071 40-50% NA NA Breast_cancer,CRC,Normal,PAAD NA NA boxplot RP11-53I6.2 NA chr18 32018829 32111779 + 92951 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-53I6.2 exo_circ_013141 0.929 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down) NA boxplot PABPC1P4 poly(A) binding protein, cytoplasmic 1 pseudogene 4 chr12 63822021 63823895 + 1875 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PABPC1P4 NA 0.365 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-329J18.4 NA chr16 47262741 47263500 + 760 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-329J18.4 NA 0.012 60-70% NA NA Normal NA NA boxplot FLJ37453 uncharacterized LOC729614 chr1 15834474 15848147 - 13674 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FLJ37453 NA 0.718 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down),HCC(down) NA boxplot XXbac-BPG252P9.9 NA chr6 30723105 30723877 - 773 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=XXbac-BPG252P9.9 NA 0.812 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot LINC00992 long intergenic non-protein coding RNA 992 chr5 117415509 117546298 + 130790 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00992 NA 0.035 60-70% NA NA HCC,Normal,PAAD NA NA boxplot AC010524.2 NA chr19 49368705 49388081 - 19377 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC010524.2 NA 0.024 60-70% Testis 3.26786065 Breast_cancer,Normal NA NA boxplot RP11-610P16.1 NA chr4 151407551 151408835 - 1285 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-610P16.1 NA 0.224 20-30% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot MGAT3-AS1 MGAT3 antisense RNA 1 chr22 39475807 39476822 - 1016 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MGAT3-AS1 NA 0.047 70-80% NA NA Breast_cancer,CRC NA NA boxplot RP4-775D17.1 NA chr1 92203148 92203991 + 844 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-775D17.1 NA 0.012 80-90% NA NA NA NA NA boxplot RP9P retinitis pigmentosa 9 pseudogene chr7 32916815 32943176 - 26362 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP9P NA 0.976 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up),PAAD(up) NA boxplot HLA-V major histocompatibility complex, class I, V (pseudogene) chr6 29790954 29797811 + 6858 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HLA-V NA 0.047 70-80% NA NA Breast_cancer,HCC,Normal NA NA boxplot SGO1-AS1 NA chr3 20174244 21145967 + 971724 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SGO1-AS1 NA 0.588 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CTC-436P18.3 NA chr5 61201309 61264929 - 63621 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-436P18.3 NA 0.047 40-50% NA NA HCC,PAAD NA NA boxplot NDUFS5P6 NADH:ubiquinone oxidoreductase subunit S5 pseudogene 6 chr8 67849044 67849338 + 295 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NDUFS5P6 NA 0.106 60-70% NA NA HCC,Normal,PAAD NA NA boxplot HNRNPA1P70 heterogeneous nuclear ribonucleoprotein A1 pseudogene 70 chr12 68035767 68036853 + 1087 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HNRNPA1P70 NA 0.235 50-60% Spleen 2.944465239 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP1-34L19.1 NA chr6 53206598 53208697 - 2100 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-34L19.1 NA 0.059 30-40% Testis 3.333054933 Breast_cancer,CRC,Normal,PAAD NA NA boxplot ZNF32-AS1 ZNF32 antisense RNA 1 chr10 43643872 43645047 + 1176 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ZNF32-AS1 NA 0.165 20-30% NA NA HCC,Normal,PAAD NA NA boxplot RP11-476B13.2 NA chr9 92676943 92677407 - 465 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-476B13.2 NA 0.047 30-40% Testis 4.906892038 CRC,Normal NA NA boxplot CTD-2369P2.8 NA chr19 10285801 10289019 - 3219 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2369P2.8 NA 0.247 30-40% Lung 2.059521387 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CRHR1-IT1 CRHR1 intronic transcript 1 chr17 45620328 45655156 + 34829 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CRHR1-IT1 NA 0.847 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down) NA boxplot RP11-467H10.2 NA chr7 77043721 77198626 + 154906 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-467H10.2 NA 0.306 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot PANDAR promoter of CDKN1A antisense DNA damage activated RNA chr6 36673621 36675126 - 1506 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PANDAR NA 0.153 70-80% NA NA HCC,Normal NA NA boxplot RP11-274A11.3 NA chr16 81618505 81620563 + 2059 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-274A11.3 NA 0.2 30-40% NA NA Breast_cancer,CRC,Normal,PAAD NA NA boxplot RP11-329A14.1 NA chr1 48435967 48437223 + 1257 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-329A14.1 NA 0.929 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(down),PAAD(down) NA boxplot USP8P1 ubiquitin specific peptidase 8 pseudogene 1 chr6 31275572 31278754 + 3183 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=USP8P1 NA 0.565 40-50% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot DLGAP1-AS3 DLGAP1 antisense RNA 3 chr18 3878180 3897069 + 18890 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DLGAP1-AS3 NA 0.012 10-20% Testis 3.417910464 Breast_cancer,HCC NA NA boxplot CCT6P1 chaperonin containing TCP1 subunit 6 pseudogene 1 chr7 65751142 65763354 + 12213 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CCT6P1 NA 0.976 0-10% NA NA CHD,CRC,HCC,Normal,PAAD CHD(down),PAAD(up) NA boxplot EHD4-AS1 EHD4 antisense RNA 1 chr15 41921417 41928883 + 7467 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=EHD4-AS1 NA 0.012 30-40% NA NA Breast_cancer,Normal NA NA boxplot CTD-2651B20.7 NA chr15 45198517 45199139 - 623 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2651B20.7 NA 0.071 70-80% NA NA Breast_cancer,CRC,HCC,PAAD NA NA boxplot NCAPGP2 non-SMC condensin I complex subunit G pseudogene 2 chr15 30005205 30006430 + 1226 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NCAPGP2 NA 0.012 10-20% NA NA Normal NA NA boxplot RP11-618L22.1 NA chr12 46970504 46972155 + 1652 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-618L22.1 NA 0.024 50-60% NA NA Normal NA NA boxplot NBPF2P neuroblastoma breakpoint family member 2, pseudogene chr1 21424625 21427967 - 3343 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NBPF2P NA 0.576 20-30% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up) NA boxplot PLEKHA8P1 pleckstrin homology domain containing A8 pseudogene 1 chr12 45173064 45216041 - 42978 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PLEKHA8P1 exo_circ_010908,exo_circ_004972 0.965 0-10% NA NA CHD,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-435D7.3 NA chr1 35739389 35743576 + 4188 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-435D7.3 NA 0.012 40-50% Testis 4.906892038 Normal,PAAD NA NA boxplot AC006548.19 NA chr22 16897445 16897546 + 102 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC006548.19 NA 0.024 90-100% NA NA CRC NA NA boxplot LINC01443 long intergenic non-protein coding RNA 1443 chr18 14946267 14973770 + 27504 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01443 NA 0.024 20-30% NA NA Breast_cancer,HCC,PAAD NA NA boxplot CTD-2033A16.2 NA chr16 69756536 69757937 - 1402 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2033A16.2 NA 0.706 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-203B9.4 NA chr6 57114894 57174236 - 59343 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-203B9.4 NA 0.235 20-30% NA NA HCC,Normal,PAAD NA NA boxplot FAR2P3 fatty acyl-CoA reductase 2 pseudogene 3 chr2 130690133 130718831 + 28699 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FAR2P3 NA 0.306 70-80% NA NA CRC,HCC,Normal,PAAD NA NA boxplot ZNF826P zinc finger protein 826, pseudogene chr19 20340269 20424969 - 84701 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ZNF826P NA 0.741 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down),CRC(down) NA boxplot RPL37P6 ribosomal protein L37 pseudogene 6 chr8 56588385 56588787 + 403 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL37P6 NA 0.024 30-40% NA NA Breast_cancer,CHD,HCC,Normal NA NA boxplot RP11-497D6.5 NA chr6 146948528 146951159 - 2632 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-497D6.5 NA 0.024 10-20% Testis 4.433576686 Normal,PAAD NA NA boxplot DNAJC8P1 DnaJ heat shock protein family (Hsp40) member C8 pseudogene 1 chr14 35430260 35430631 + 372 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DNAJC8P1 NA 0.247 90-100% Testis 4.906892038 Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot CTD-2583A14.8 NA chr19 57867038 57868172 - 1135 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2583A14.8 NA 0.106 50-60% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot THRIL TNF and HNRNPL related immunoregulatory long non-coding RNA chr12 125025434 125027410 - 1977 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=THRIL NA 0.271 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-444B24.2 NA chr12 68143318 68143690 + 373 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-444B24.2 NA 0.035 40-50% NA NA CRC,Normal NA NA boxplot LYST-AS1 LYST antisense RNA 1 chr1 235839483 235840182 + 700 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LYST-AS1 NA 0.024 80-90% NA NA Breast_cancer,CRC,Normal NA NA boxplot PAXIP1-AS2 PAXIP1 antisense RNA 2 chr7 154928498 154949908 + 21411 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PAXIP1-AS2 NA 0.976 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-286N22.6 NA chr11 61426448 61427325 - 878 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-286N22.6 NA 0.094 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-428C19.5 NA chr11 19299883 19308358 + 8476 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-428C19.5 NA 0.024 70-80% NA NA CRC NA NA boxplot RP11-930O11.2 NA chr14 56303490 56310761 - 7272 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-930O11.2 NA 0.8 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot FLJ22447 uncharacterized LOC400221 chr14 61570540 61658696 + 88157 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FLJ22447 NA 0.459 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-430B1.1 NA chr15 52033707 52035625 + 1919 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-430B1.1 NA 0.012 60-70% Skin 4.906892038 Normal NA NA boxplot RP11-141C7.3 NA chr3 195650146 195651472 - 1327 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-141C7.3 NA 0.176 70-80% NA NA HCC,Normal,PAAD NA NA boxplot RP11-30K9.1 NA chr15 58869659 58870134 + 476 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-30K9.1 NA 0.012 70-80% Testis 2.997934334 PAAD NA NA boxplot RP4-594I10.3 NA chr1 24538802 24556024 - 17223 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-594I10.3 NA 0.188 0-10% Pituitary 2.299646248 Breast_cancer,HCC,Normal CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot RP4-533D7.4 NA chr1 46046818 46048368 + 1551 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-533D7.4 NA 0.012 70-80% NA NA NA NA NA boxplot AC002310.10 NA chr16 30537202 30538231 - 1030 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC002310.10 NA 0.035 90-100% NA NA HCC,Normal NA NA boxplot HNRNPA1P33 heterogeneous nuclear ribonucleoprotein A1 pseudogene 33 chr10 46415853 46416413 + 561 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HNRNPA1P33 NA 0.047 70-80% Skin 1.952706913 Normal,PAAD NA NA boxplot RP11-423P10.2 NA chr2 37208875 37212677 + 3803 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-423P10.2 NA 0.412 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC091814.2 NA chr12 9936579 9943495 - 6917 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC091814.2 exo_circ_041710,exo_circ_051153 0.518 10-20% Testis 3.065684132 CRC,HCC,Normal,PAAD CHD(down),HCC(down) NA boxplot RP3-436N22.3 NA chr1 173555251 173612772 + 57522 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-436N22.3 NA 0.024 30-40% Testis 3.785691022 HCC,Normal NA NA boxplot RP11-277P12.20 NA chr12 10363769 10398506 + 34738 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-277P12.20 NA 0.176 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-553A21.3 NA chr6 73693903 73696131 - 2229 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-553A21.3 NA 0.671 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down),PAAD(down) NA boxplot RP11-524N5.1 NA chr5 158320683 158409773 - 89091 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-524N5.1 NA 0.271 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-135F9.4 NA chr12 100026248 100027540 - 1293 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-135F9.4 NA 0.188 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-860B13.1 NA chr12 27779821 27781067 - 1247 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-860B13.1 NA 0.071 60-70% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot RP11-656G20.1 NA chr8 72202751 72251565 - 48815 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-656G20.1 NA 0.024 70-80% Stomach 3.414011767 Breast_cancer,PAAD NA NA boxplot HAUS6P3 NA chr7 53862233 53863339 + 1107 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HAUS6P3 NA 0.329 70-80% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot SNX5P1 sorting nexin 5 pseudogene 1 chr4 76344550 76345590 + 1041 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SNX5P1 NA 0.306 90-100% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-434E6.5 NA chr16 54285604 54289568 + 3965 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-434E6.5 NA 0.141 80-90% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot RP11-326A19.4 NA chr15 89041223 89082819 + 41597 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-326A19.4 NA 0.024 90-100% Artery 1.846456332 Breast_cancer,PAAD NA NA boxplot LL09NC01-251B2.3 NA chr9 134132242 134135772 - 3531 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LL09NC01-251B2.3 NA 0.035 60-70% NA NA Breast_cancer,CRC,Normal NA NA boxplot RP5-1112D6.7 NA chr6 111297126 111298510 + 1385 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-1112D6.7 NA 0.141 40-50% NA NA CRC,Normal,PAAD NA NA boxplot RP11-680H20.1 NA chr11 94188449 94188997 - 549 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-680H20.1 NA 0.929 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down) NA boxplot AC018731.3 NA chr2 151117955 151186209 - 68255 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC018731.3 NA 0.024 30-40% NA NA CRC,HCC NA NA boxplot CASC19 cancer susceptibility candidate 19 (non-protein coding) chr8 127185635 127203222 - 17588 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CASC19 exo_circ_002242,exo_circ_042445,exo_circ_004368 0.047 0-10% NA NA HCC,PAAD PAAD(up) NA boxplot RP11-746P2.6 NA chr7 65290429 65292776 + 2348 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-746P2.6 NA 0.012 70-80% NA NA NA NA NA boxplot C10orf71-AS1 C10orf71 antisense RNA 1 chr10 49296112 49299018 - 2907 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=C10orf71-AS1 NA 0.012 90-100% NA NA CRC NA NA boxplot RP11-715F3.2 NA chr18 2561172 2562220 - 1049 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-715F3.2 NA 0.094 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RPL36AP15 ribosomal protein L36a pseudogene 15 chr2 47797826 47798091 - 266 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL36AP15 NA 0.047 20-30% NA NA CRC NA NA boxplot AC079610.1 NA chr2 212581357 213021545 - 440189 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC079610.1 NA 0.118 50-60% NA NA CRC,HCC,Normal NA NA boxplot XKRY X-linked Kx blood group related, Y-linked chrY 17768980 17777400 - 8421 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=XKRY NA 0.012 90-100% NA NA HCC,Normal,PAAD NA NA boxplot AP001063.1 NA chr21 44347767 44348295 - 529 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AP001063.1 NA 0.024 50-60% NA NA Normal,PAAD NA NA boxplot RP11-164J13.1 NA chr15 42348103 42412317 + 64215 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-164J13.1 NA 0.859 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),HCC(down) NA boxplot RRN3P1 RRN3 homolog, RNA polymerase I transcription factor pseudogene 1 chr16 21796106 21820410 - 24305 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RRN3P1 NA 0.953 0-10% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot AC013269.3 NA chr2 130515997 130526691 - 10695 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC013269.3 NA 0.012 80-90% Pituitary 4.906892038 CRC,HCC NA NA boxplot RP6-24A23.3 NA chrX 108736011 108738903 + 2893 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP6-24A23.3 NA 0.035 10-20% NA NA Breast_cancer,PAAD NA NA boxplot RP1-234P15.4 NA chr6 75285014 75297003 + 11990 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-234P15.4 NA 0.259 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-76E16.2 NA chr12 42286911 42288560 + 1650 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-76E16.2 NA 0.365 90-100% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-471M2.4 NA chr13 87765752 87765881 - 130 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-471M2.4 NA 0.024 30-40% NA NA PAAD NA NA boxplot TPT1P10 tumor protein, translationally-controlled 1 pseudogene 10 chr10 58212541 58213036 - 496 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TPT1P10 NA 0.153 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CTB-118N6.2 NA chr5 116574482 116591398 + 16917 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTB-118N6.2 NA 0.012 40-50% NA NA PAAD NA NA boxplot RP11-662B19.1 NA chr8 28810103 28810418 + 316 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-662B19.1 NA 0.012 20-30% NA NA HCC NA NA boxplot EIF4BP7 eukaryotic translation initiation factor 4B pseudogene 7 chrX 111619677 111621489 - 1813 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=EIF4BP7 NA 1 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CRC(down) NA boxplot LINC01118 long intergenic non-protein coding RNA 1118 chr2 46816668 46822657 + 5990 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01118 NA 0.082 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot LINC00472 long intergenic non-protein coding RNA 472 chr6 71344344 71420769 - 76426 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00472 NA 0.247 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD PAAD(up) NA boxplot HLA-DQB1-AS1 HLA-DQB1 antisense RNA 1 chr6 32659880 32660729 + 850 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HLA-DQB1-AS1 NA 0.165 30-40% NA NA CRC,Normal,PAAD NA NA boxplot THAP12P7 NA chr8 78760142 78762431 - 2290 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=THAP12P7 NA 0.929 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP13-726E6.1 NA chr11 3469319 3531328 + 62010 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP13-726E6.1 NA 0.035 10-20% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot RP11-300J18.2 NA chr14 88010787 88015611 - 4825 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-300J18.2 NA 0.071 60-70% Testis 4.906892038 Normal NA NA boxplot DUXAP8 double homeobox A pseudogene 8 chr22 15826566 15827187 + 622 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DUXAP8 NA 0.259 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD PAAD(up) NA boxplot RP5-1153D9.5 NA chr20 56522252 56523499 + 1248 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-1153D9.5 NA 0.059 60-70% NA NA Breast_cancer,CRC,Normal NA NA boxplot UBA6-AS1 UBA6 antisense RNA 1 (head to head) chr4 67701280 68080952 + 379673 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=UBA6-AS1 exo_circ_054634 0.976 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-598F7.4 NA chr12 137411 149169 - 11759 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-598F7.4 NA 0.071 30-40% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot RP11-124B13.1 NA chr8 6044353 6257537 - 213185 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-124B13.1 NA 0.012 70-80% Testis 4.815211312 Breast_cancer,PAAD NA NA boxplot INTS4P2 integrator complex subunit 4 pseudogene 2 chr7 65647864 65715661 + 67798 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=INTS4P2 NA 0.365 60-70% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot FAM230B family with sequence similarity 230 member B (non-protein coding) chr22 21167758 21302681 + 134924 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FAM230B NA 0.024 50-60% Testis 4.805800496 Breast_cancer,PAAD NA NA boxplot PTGES2-AS1 PTGES2 antisense RNA 1 (head to head) chr9 128128529 128130628 + 2100 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PTGES2-AS1 NA 0.059 80-90% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot RP11-723O4.7 NA chr3 128914833 128915060 - 228 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-723O4.7 NA 0.012 0-10% NA NA PAAD NA NA boxplot RP11-63L7.5 NA chr6 89080164 89080667 - 504 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-63L7.5 NA 0.024 80-90% Testis 3.325954177 CRC,Normal NA NA boxplot AC092295.4 NA chr19 36528318 36535235 + 6918 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC092295.4 NA 0.035 80-90% Testis 3.03802393 CRC NA NA boxplot RP11-1C1.4 NA chr5 10493527 10502728 - 9202 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1C1.4 NA 0.012 80-90% NA NA Breast_cancer,HCC NA NA boxplot HAR1B highly accelerated region 1B (non-protein coding) chr20 63095493 63102319 - 6827 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HAR1B NA 0.2 30-40% Testis 1.912006789 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-138H11.1 NA chr18 34737795 34767663 - 29869 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-138H11.1 NA 0.024 90-100% NA NA HCC NA NA boxplot CTD-2249K22.1 NA chr5 81851601 81852201 + 601 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2249K22.1 NA 0.035 40-50% NA NA Breast_cancer,CRC,Normal NA NA boxplot RP11-665G4.1 NA chr4 15004942 15427914 - 422973 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-665G4.1 NA 0.224 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP5-963E22.6 NA chr20 63218041 63218502 + 462 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-963E22.6 NA 0.012 80-90% NA NA Breast_cancer NA NA boxplot PGM5P4 phosphoglucomutase 5 pseudogene 4 chr2 113541937 113563298 + 21362 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PGM5P4 NA 0.224 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot COX7A2P1 cytochrome c oxidase subunit VIIa polypeptide 2 (liver) pseudogene 1 chr14 67652300 67652614 - 315 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=COX7A2P1 NA 0.047 40-50% NA NA Normal,PAAD NA NA boxplot RP11-68L18.1 NA chr8 90646441 90656598 + 10158 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-68L18.1 NA 0.247 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RPF2P1 ribosome production factor 2 homolog pseudogene 1 chr20 35752814 35753719 + 906 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPF2P1 NA 0.235 70-80% Testis 4.906892038 HCC,Normal,PAAD NA NA boxplot CTD-2270L9.4 NA chr16 23452758 23457606 + 4849 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2270L9.4 NA 0.353 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot UBTFL6 upstream binding transcription factor, RNA polymerase I-like 6 (pseudogene) chr2 97636780 97637803 - 1024 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=UBTFL6 NA 0.153 10-20% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot AC093627.10 NA chr7 149597 155465 + 5869 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC093627.10 NA 0.588 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down) NA boxplot DUBR DPPA2 upstream binding RNA chr3 107240692 107326964 + 86273 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DUBR NA 0.824 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-94I2.4 NA chr1 148021850 148025931 + 4082 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-94I2.4 NA 0.059 60-70% Testis 1.700945113 CRC,HCC,Normal,PAAD NA NA boxplot FAM90A11P family with sequence similarity 90, member A11 pseudogene chr8 8011782 8017011 - 5230 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FAM90A11P NA 0.012 0-10% NA NA Breast_cancer,CHD NA NA boxplot CTA-984G1.5 NA chr22 29260889 29262037 + 1149 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTA-984G1.5 NA 0.035 50-60% NA NA HCC,Normal NA NA boxplot CDC42EP3P1 CDC42 effector protein 3 pseudogene 1 chr19 23384530 23385293 + 764 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CDC42EP3P1 NA 0.024 90-100% NA NA Breast_cancer,HCC,Normal NA NA boxplot RP11-284B18.3 NA chrX 64305047 64306733 - 1687 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-284B18.3 NA 0.176 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AL450992.2 NA chr1 151841877 151850385 + 8509 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AL450992.2 NA 0.718 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down) NA boxplot LINC00670 long intergenic non-protein coding RNA 670 chr17 12549782 12642854 + 93073 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00670 NA 0.059 50-60% Artery 1.95473273 Breast_cancer,CRC,PAAD NA NA boxplot RPL31P11 ribosomal protein L31 pseudogene 11 chr1 161683695 161685252 - 1558 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL31P11 NA 0.012 70-80% Spleen 2.107980121 Breast_cancer,Normal NA NA boxplot LINC00507 long intergenic non-protein coding RNA 507 chr12 127915372 127951552 + 36181 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00507 NA 0.024 80-90% Brain 4.395853817 Normal,PAAD NA NA boxplot MAP3K14-AS1 MAP3K14 antisense RNA 1 chr17 45247925 45268630 + 20706 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MAP3K14-AS1 NA 0.588 20-30% Testis 1.10571548 Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-428K3.1 NA chr1 178724306 178726285 - 1980 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-428K3.1 NA 0.353 40-50% Testis 1.923578696 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-799B12.1 NA chr18 24135468 24135829 - 362 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-799B12.1 NA 0.071 30-40% NA NA Normal NA NA boxplot NDUFB4P11 NADH:ubiquinone oxidoreductase subunit B4 pseudogene 11 chr14 103139675 103141959 + 2285 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NDUFB4P11 NA 0.047 20-30% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot SIGLEC17P sialic acid binding Ig-like lectin 17, pseudogene chr19 51167328 51173524 + 6197 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SIGLEC17P NA 0.941 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CRC(down) NA boxplot RP1-28O10.1 NA chr1 209661364 209724125 - 62762 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-28O10.1 NA 0.259 50-60% Adipose 1.052187034 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CTB-52I2.4 NA chr19 18022403 18032099 + 9697 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTB-52I2.4 NA 0.882 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot FAM53B-AS1 FAM53B antisense RNA 1 chr10 124703625 124714217 + 10593 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FAM53B-AS1 NA 0.094 70-80% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot SEPT10P1 septin 10 pseudogene 1 chr8 56476826 56477987 - 1162 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SEPT10P1 NA 0.294 50-60% Testis 3.036893978 Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot CENPIP1 centromere protein I pseudogene 1 chr13 19126399 19139611 + 13213 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CENPIP1 NA 0.012 90-100% Testis 4.906892038 Breast_cancer,CRC NA NA boxplot PHBP19 prohibitin pseudogene 19 chr12 51124628 51125381 - 754 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PHBP19 NA 0.165 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CTB-96E2.10 NA chr17 28373256 28373562 + 307 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTB-96E2.10 NA 0.094 90-100% NA NA HCC,Normal NA NA boxplot CTD-2192J16.15 NA chr19 12643275 12643919 - 645 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2192J16.15 NA 0.929 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(down) NA boxplot RP11-65N13.8 NA chr9 125241663 125257018 + 15356 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-65N13.8 NA 0.071 60-70% Testis 4.730283533 Breast_cancer,CRC,HCC,Normal NA NA boxplot KB-7G2.8 NA chr22 16676016 16694648 - 18633 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KB-7G2.8 NA 0.035 90-100% NA NA Normal NA NA boxplot SETP14 SET pseudogene 14 chr3 155987304 155988176 + 873 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SETP14 NA 1 0-10% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-473O4.5 NA chr8 129832301 129844504 + 12204 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-473O4.5 NA 0.035 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CTC-429C10.7 NA chr19 51914675 51917703 - 3029 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-429C10.7 NA 0.012 80-90% NA NA Normal NA NA boxplot RP4-781K5.5 NA chr1 234660271 234667104 + 6834 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-781K5.5 NA 0.012 40-50% Pituitary 3.505632856 Breast_cancer,PAAD NA NA boxplot KDM4A-AS1 KDM4A antisense RNA 1 chr1 43699765 43708138 - 8374 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KDM4A-AS1 NA 0.424 30-40% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot SLC47A1P1 solute carrier family 47 (multidrug and toxin extrusion), member 1 pseudogene 1 chr17 19579943 19596058 + 16116 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SLC47A1P1 NA 0.024 40-50% NA NA Breast_cancer,Normal NA NA boxplot RP11-731F5.1 NA chr14 105601472 105605357 - 3886 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-731F5.1 NA 0.341 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CTB-47B11.3 NA chr5 157375741 157384950 - 9210 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTB-47B11.3 NA 0.035 40-50% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot AC091814.3 NA chr12 9948137 9953336 - 5200 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC091814.3 NA 0.071 10-20% Testis 4.397960518 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-796G6.1 NA chr14 101677943 101678380 + 438 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-796G6.1 NA 0.576 80-90% NA NA CRC,HCC,Normal,PAAD NA NA boxplot ATP1B3-AS1 ATP1B3 antisense RNA 1 chr3 141918252 141919021 - 770 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ATP1B3-AS1 NA 0.012 50-60% NA NA CRC NA NA boxplot ACTG1P3 actin gamma 1 pseudogene 3 chr20 1160584 1161697 + 1114 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ACTG1P3 NA 0.094 30-40% NA NA Breast_cancer,CRC,Normal,PAAD NA NA boxplot RPL21P40 ribosomal protein L21 pseudogene 40 chr3 32030196 32030678 + 483 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL21P40 NA 0.082 20-30% Spleen 2.74724883 CHD,CRC,Normal NA NA boxplot CYCSP19 cytochrome c, somatic pseudogene 19 chr7 121398452 121398767 + 316 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CYCSP19 NA 0.012 40-50% NA NA HCC NA NA boxplot RP11-404F10.6 NA chr1 160775954 160776608 - 655 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-404F10.6 NA 0.212 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot IL6STP1 interleukin 6 signal transducer (gp130, oncostatin M receptor) pseudogene 1 chr17 15783288 15784307 + 1020 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=IL6STP1 NA 0.024 90-100% Testis 2.938505055 CHD,Normal NA NA boxplot CTC-501O10.1 NA chr17 43680273 43705884 + 25612 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-501O10.1 NA 0.118 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-425L10.1 NA chr11 46428653 46429150 - 498 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-425L10.1 NA 0.929 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(down) NA boxplot VPS9D1-AS1 VPS9D1 antisense RNA 1 chr16 89711856 89718165 + 6310 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=VPS9D1-AS1 NA 0.482 20-30% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD PAAD(up) NA boxplot RP11-119F19.4 NA chr10 79684494 79684983 - 490 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-119F19.4 NA 0.235 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP4-790G17.7 NA chr1 150255095 150257286 - 2192 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-790G17.7 NA 0.012 70-80% NA NA NA NA NA boxplot AC008781.7 NA chr5 141618414 141626481 + 8068 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC008781.7 NA 0.518 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-62J1.3 NA chr7 128306649 128307678 + 1030 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-62J1.3 NA 0.2 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot SMG7-AS1 SMG7 antisense RNA 1 chr1 183460874 183472265 - 11392 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SMG7-AS1 NA 0.141 70-80% Testis 3.064808344 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC010746.3 NA chr2 197311393 197312740 + 1348 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC010746.3 NA 0.071 60-70% Testis 4.727938263 CRC,HCC,Normal,PAAD NA NA boxplot AC053503.6 NA chr2 219425071 219426184 - 1114 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC053503.6 NA 0.012 90-100% NA NA Normal NA NA boxplot RP11-184A2.2 NA chr10 3767915 3768751 + 837 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-184A2.2 NA 0.024 30-40% Skin 3.07493617 HCC,PAAD NA NA boxplot LINC00942 long intergenic non-protein coding RNA 942 chr12 1500525 1507318 - 6794 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00942 NA 0.035 80-90% NA NA Breast_cancer,HCC,PAAD NA NA boxplot CTD-2311M21.2 NA chr15 74350768 74364620 + 13853 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2311M21.2 NA 0.012 90-100% NA NA Breast_cancer,Normal,PAAD NA NA boxplot LINC00900 long intergenic non-protein coding RNA 900 chr11 115754248 115760627 - 6380 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00900 NA 0.282 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot LINC01623 long intergenic non-protein coding RNA 1623 chr6 28859625 28864630 - 5006 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01623 NA 0.024 60-70% NA NA Breast_cancer,Normal NA NA boxplot CTD-3099C6.9 NA chr19 52650437 52653284 - 2848 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-3099C6.9 NA 0.929 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down),HCC(up) NA boxplot AC098614.2 NA chr3 27632976 27635427 + 2452 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC098614.2 NA 0.929 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-483F11.7 NA chr10 99651989 99653905 - 1917 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-483F11.7 NA 0.106 20-30% Testis 1.987004077 CRC,HCC,Normal,PAAD NA NA boxplot MTCYBP28 MT-CYB pseudogene 28 chr16 82120638 82121769 - 1132 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MTCYBP28 NA 0.035 60-70% NA NA Breast_cancer,Normal,PAAD NA NA boxplot CNTNAP3P2 contactin associated protein-like 3 pseudogene 2 chr9 67059560 67293468 + 233909 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CNTNAP3P2 NA 0.659 20-30% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot AC008065.1 NA chr2 171374931 171375278 - 348 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC008065.1 NA 0.071 60-70% NA NA HCC,Normal,PAAD NA NA boxplot SLC20A1P1 solute carrier family 20 (phosphate transporter), member 1 pseudogene 1 chr14 106683395 106684350 - 956 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SLC20A1P1 NA 0.012 60-70% NA NA Normal NA NA boxplot RP13-314C10.5 NA chrX 23772992 23782956 - 9965 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP13-314C10.5 NA 0.224 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-552D8.1 NA chr1 211829846 211853703 + 23858 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-552D8.1 NA 0.035 80-90% Testis 4.862061017 CRC,HCC,PAAD NA NA boxplot U47924.6 NA chr12 6873389 6884741 + 11353 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=U47924.6 NA 0.906 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot HCFC1-AS1 HCFC1 antisense RNA 1 chrX 153969325 153970087 + 763 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HCFC1-AS1 NA 0.494 20-30% Pituitary 2.437294972 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot SH3GL1P1 SH3-domain GRB2-like 1 pseudogene 1 chr17 32039974 32042828 + 2855 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SH3GL1P1 NA 0.212 40-50% NA NA Breast_cancer,CRC,Normal,PAAD NA NA boxplot RP11-750I4.2 NA chr14 90107675 90107995 + 321 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-750I4.2 NA 0.012 60-70% Testis 4.906892038 CRC NA NA boxplot RP11-751H17.1 NA chr18 77180106 77235430 + 55325 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-751H17.1 NA 0.365 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-327E2.5 NA chr10 71364243 71366374 + 2132 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-327E2.5 NA 0.165 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot KIAA1614-AS1 KIAA1614 antisense RNA 1 chr1 180949699 180954887 - 5189 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KIAA1614-AS1 NA 0.4 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CTD-3157E16.1 NA chr17 15787787 15788205 - 419 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-3157E16.1 NA 0.071 30-40% NA NA HCC,Normal,PAAD NA NA boxplot RP11-4B16.3 NA chr18 77093086 77093446 + 361 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-4B16.3 NA 0.035 80-90% NA NA HCC,Normal NA NA boxplot RP11-732A19.8 NA chr11 6603642 6604420 - 779 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-732A19.8 NA 0.4 70-80% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-1038A11.3 NA chr12 5290480 5383653 + 93174 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1038A11.3 NA 0.012 90-100% NA NA Breast_cancer NA NA boxplot RP11-707G14.1 NA chr11 73760563 73761070 + 508 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-707G14.1 NA 0.659 20-30% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot KLF3-AS1 KLF3 antisense RNA 1 chr4 38612701 38664883 - 52183 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KLF3-AS1 NA 0.494 20-30% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-350N15.6 NA chr8 38408048 38408742 - 695 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-350N15.6 NA 0.035 60-70% NA NA HCC,Normal NA NA boxplot AC010733.5 NA chr2 60938204 60938604 - 401 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC010733.5 NA 0.153 10-20% NA NA CRC,Normal,PAAD NA NA boxplot HCP5 HLA complex P5 (non-protein coding) chr6 31400702 31477506 + 76805 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HCP5 NA 1 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot AC005592.1 NA chr5 142745600 142760998 + 15399 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC005592.1 exo_circ_049471,exo_circ_031034,exo_circ_027697 0.012 30-40% NA NA NA NA NA boxplot AC073641.2 NA chr2 223965701 223967706 - 2006 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC073641.2 NA 0.247 70-80% NA NA CRC,HCC,Normal,PAAD NA NA boxplot AC016708.2 NA chr2 214847128 214847445 + 318 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC016708.2 NA 0.929 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(up),PAAD(down) NA boxplot SUMO2P17 SUMO2 pseudogene 17 chr17 48874860 48908983 - 34124 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SUMO2P17 NA 0.659 40-50% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-307L14.2 NA chr5 65020614 65020989 + 376 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-307L14.2 NA 0.047 30-40% NA NA CRC,Normal,PAAD NA NA boxplot ZNF503-AS2 ZNF503 antisense RNA 2 chr10 75401519 75408982 + 7464 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ZNF503-AS2 NA 0.212 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-528G1.2 NA chr1 160537073 160571458 + 34386 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-528G1.2 NA 0.435 20-30% Pancreas 4.085176609 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-95I16.6 NA chr10 120984966 120985596 - 631 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-95I16.6 NA 0.012 80-90% NA NA HCC NA NA boxplot AC104534.2 NA chr19 38820166 38823223 + 3058 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC104534.2 NA 0.082 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-195B3.1 NA chr10 3266003 3267015 + 1013 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-195B3.1 NA 0.012 60-70% NA NA HCC NA NA boxplot TTLL7-IT1 TTLL7 intronic transcript 1 chr1 83979118 83984300 - 5183 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TTLL7-IT1 NA 0.059 70-80% Testis 1.072496715 CRC,HCC,Normal NA NA boxplot LA16c-360H6.2 NA chr16 3308609 3308816 + 208 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LA16c-360H6.2 NA 0.388 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP4-569M23.2 NA chr20 47352561 47354633 + 2073 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-569M23.2 NA 0.247 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-326C3.2 NA chr11 287305 288987 + 1683 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-326C3.2 NA 0.259 30-40% Pancreas 2.006417809 Breast_cancer,CRC,HCC,Normal NA NA boxplot RP11-696N14.1 NA chr4 99088857 99301356 + 212500 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-696N14.1 exo_circ_038784,exo_circ_038783,exo_circ_054703,exo_circ_054704 0.671 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),HCC(down),PAAD(down) NA boxplot RP11-134L10.1 NA chr7 135168403 135169547 + 1145 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-134L10.1 NA 0.859 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(up) NA boxplot SUGT1P2 SGT1 homolog, MIS12 kinetochore complex assembly cochaperone pseudogene 2 chr3 32752910 32753901 + 992 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SUGT1P2 NA 0.082 10-20% NA NA CRC,HCC,PAAD NA NA boxplot AC004744.3 NA chr7 18892096 18899433 - 7338 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC004744.3 NA 0.012 10-20% Testis 4.906892038 Normal NA NA boxplot RP11-383C6.2 NA chr10 114994657 114996593 + 1937 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-383C6.2 NA 0.012 60-70% Testis 4.346361407 Breast_cancer,PAAD NA NA boxplot RP11-314B1.2 NA chr2 225698514 225703654 + 5141 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-314B1.2 NA 0.071 0-10% NA NA CRC,Normal,PAAD PAAD(up) NA boxplot CBX3P4 chromobox 3 pseudogene 4 chr12 2786931 2794295 - 7365 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CBX3P4 NA 0.047 60-70% Testis 1.058095446 CRC,Normal,PAAD NA NA boxplot AF131215.6 NA chr8 11062647 11067089 - 4443 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AF131215.6 NA 0.212 30-40% Pituitary 3.554574487 CRC,HCC,Normal,PAAD NA NA boxplot CTD-2246P4.1 NA chr17 76799044 76807102 + 8059 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2246P4.1 NA 0.012 40-50% NA NA Breast_cancer,Normal NA NA boxplot RP11-512N4.2 NA chr10 50472814 50474246 + 1433 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-512N4.2 NA 0.012 90-100% NA NA NA NA NA boxplot RPS11P6 ribosomal protein S11 pseudogene 6 chr12 64222337 64397065 + 174729 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPS11P6 NA 0.059 50-60% Testis 3.419864031 Breast_cancer,HCC,Normal,PAAD NA NA boxplot ADAM3A ADAM metallopeptidase domain 3A (pseudogene) chr8 39451045 39522852 - 71808 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ADAM3A NA 0.012 50-60% Testis 4.906892038 HCC NA NA boxplot RPL7P49 ribosomal protein L7 pseudogene 49 chr17 76430417 76431124 - 708 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL7P49 NA 0.165 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RANP1 RAN, member RAS oncogene family pseudogene 1 chr6 30485940 30486590 + 651 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RANP1 NA 0.753 50-60% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot THAP5P1 THAP domain containing 5 pseudogene 1 chr7 158623188 158623449 - 262 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=THAP5P1 NA 0.188 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot AC005306.3 NA chr19 1989401 1990370 + 970 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC005306.3 NA 0.341 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot TCAF1P1 TRPM8 channel-associated factor 1 pseudogene 1 chr7 143598040 143604839 + 6800 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TCAF1P1 NA 0.965 0-10% NA NA CHD,CRC,HCC,Normal,PAAD CHD(up),HCC(up),PAAD(up) NA boxplot RP4-535B20.1 NA chr1 65066627 65067737 - 1111 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-535B20.1 NA 0.153 70-80% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC007383.3 NA chr2 206084605 206086564 + 1960 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC007383.3 NA 0.529 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-313P18.1 NA chr15 51707995 51715220 - 7226 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-313P18.1 NA 0.012 90-100% Testis 4.805013107 CRC NA NA boxplot RP11-515C16.1 NA chr5 140609085 140609400 + 316 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-515C16.1 NA 0.012 10-20% NA NA CRC NA NA boxplot AC069257.6 NA chr3 196298061 196298215 - 155 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC069257.6 NA 0.035 90-100% NA NA CRC,PAAD NA NA boxplot FAM183DP family with sequence similarity 183, member D, pseudogene chr2 102249857 102250255 - 399 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FAM183DP NA 0.012 50-60% NA NA Breast_cancer,CRC NA NA boxplot ALG1L10P asparagine-linked glycosylation 1-like 10, pseudogene chr12 8227734 8231764 + 4031 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ALG1L10P NA 0.059 70-80% NA NA Breast_cancer,CRC,Normal,PAAD NA NA boxplot RP11-756P10.2 NA chr4 188777679 188796633 - 18955 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-756P10.2 NA 0.035 50-60% Testis 4.876227267 Breast_cancer,HCC,Normal NA NA boxplot RP11-485G7.5 NA chr16 11341809 11345211 - 3403 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-485G7.5 NA 0.082 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CTD-2015B23.2 NA chr5 24170370 24171246 + 877 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2015B23.2 NA 0.788 20-30% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(down) NA boxplot OR6R1P olfactory receptor family 6 subfamily R member 1 pseudogene chr1 247833349 247834288 - 940 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=OR6R1P NA 0.247 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot SRP14-AS1 SRP14 antisense RNA1 (head to head) chr15 40039311 40067290 + 27980 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SRP14-AS1 NA 0.847 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down) NA boxplot KLHL6-AS1 KLHL6 antisense RNA 1 chr3 183548735 183552326 + 3592 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KLHL6-AS1 NA 0.012 20-30% NA NA HCC NA NA boxplot RP11-793J2.1 NA chr18 63966406 63970181 - 3776 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-793J2.1 NA 0.094 50-60% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot LINC01197 long intergenic non-protein coding RNA 1197 chr15 95209099 95327129 - 118031 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01197 exo_circ_001924,exo_circ_011218,exo_circ_005347 0.835 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP3-497J21.1 NA chr6 166701094 166702839 - 1746 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-497J21.1 NA 0.882 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot RP11-85E16.1 NA chr7 36734004 36734535 - 532 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-85E16.1 exo_circ_027943 0.024 80-90% NA NA Breast_cancer,Normal,PAAD NA NA boxplot RPS18P12 ribosomal protein S18 pseudogene 12 chr17 14705076 14705534 - 459 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPS18P12 NA 0.894 60-70% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot PVRL3-AS1 PVRL3 antisense RNA 1 chr3 110893708 111071553 - 177846 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PVRL3-AS1 NA 0.024 70-80% Testis 2.032875374 Breast_cancer,CRC NA NA boxplot RP11-33N16.3 NA chr14 89412312 89954659 - 542348 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-33N16.3 NA 0.859 20-30% NA NA CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP5-940J5.3 NA chr12 6532290 6533498 - 1209 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-940J5.3 NA 0.082 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot SSU72P3 SSU72 pseudogene 3 chr11 4329865 4330446 + 582 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SSU72P3 NA 0.012 20-30% NA NA Breast_cancer,PAAD NA NA boxplot OSBPL10-AS1 OSBPL10 antisense RNA 1 chr3 31704058 31721652 + 17595 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=OSBPL10-AS1 NA 0.012 70-80% Testis 4.277617301 Breast_cancer,HCC NA NA boxplot RP4-718P11.1 NA chr20 13073667 13074312 - 646 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-718P11.1 NA 0.012 90-100% NA NA Breast_cancer NA NA boxplot RP11-56B16.2 NA chr15 51919073 51930627 - 11555 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-56B16.2 exo_circ_034391 0.365 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot TWF1P1 twinfilin 1 pseudogene 1 chr17 29203426 29204474 - 1049 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TWF1P1 NA 1 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down),CRC(down) NA boxplot RP11-315O6.1 NA chr11 102452919 102462008 + 9090 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-315O6.1 NA 0.165 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-334L9.1 NA chr1 38708931 38710890 + 1960 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-334L9.1 NA 0.059 70-80% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-97O12.3 NA chr15 88568287 88568562 + 276 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-97O12.3 NA 0.012 90-100% NA NA NA NA NA boxplot LINC00486 long intergenic non-protein coding RNA 486 chr2 32825443 32926693 + 101251 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00486 NA 0.035 40-50% NA NA HCC,Normal,PAAD NA NA boxplot RP11-53B2.6 NA chr18 13526078 13526688 + 611 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-53B2.6 exo_circ_017290,exo_circ_028915 0.388 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot MIR296 microRNA 296 chr20 58817132 58817725 - 594 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MIR296 NA 0.012 80-90% NA NA PAAD NA NA boxplot FAM215A family with sequence similarity 215 member A (non-protein coding) chr17 43917194 43917985 + 792 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FAM215A NA 0.047 30-40% Testis 4.020048376 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-115D19.2 NA chr4 89748283 89749154 + 872 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-115D19.2 NA 0.012 90-100% NA NA NA NA NA boxplot Z83851.4 NA chr22 42276355 42277052 + 698 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=Z83851.4 NA 0.259 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-1008M1.1 NA chr3 68192398 68192580 + 183 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1008M1.1 NA 0.024 80-90% NA NA CRC,Normal NA NA boxplot GAPDHP32 glyceraldehyde 3 phosphate dehydrogenase pseudogene 32 chr1 119533749 119534746 - 998 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GAPDHP32 NA 0.012 90-100% NA NA Breast_cancer,CRC NA NA boxplot CTD-2631K10.1 NA chr5 72794405 72816565 - 22161 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2631K10.1 NA 0.047 70-80% Testis 3.478770847 HCC,Normal NA NA boxplot RP11-463O12.3 NA chr12 122865335 122867021 + 1687 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-463O12.3 NA 0.541 20-30% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot BRCC3P1 BRCA1/BRCA2-containing complex subunit 3 pseudogene 1 chr5 176308063 176309013 + 951 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=BRCC3P1 NA 0.282 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-1102P22.2 NA chr16 17249674 17251395 - 1722 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1102P22.2 NA 0.165 30-40% NA NA Breast_cancer,CRC,Normal,PAAD NA NA boxplot RP11-838N2.5 NA chr18 3284145 3327292 + 43148 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-838N2.5 NA 0.012 0-10% NA NA Breast_cancer,PAAD NA NA boxplot RP11-514F3.4 NA chr11 36321158 36323440 - 2283 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-514F3.4 NA 0.012 80-90% Testis 4.538348585 NA NA NA boxplot PSMA6P2 proteasome (prosome, macropain) subunit, alpha type, 6 pseudogene 2 chrX 12825840 12826833 + 994 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PSMA6P2 NA 0.353 80-90% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-403I13.5 NA chr1 143736066 143739506 + 3441 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-403I13.5 NA 0.188 70-80% Liver 1.411172539 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot DDX11L10 DEAD/H-box helicase 11 like 10 chr16 11555 14090 + 2536 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DDX11L10 NA 1 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-334E6.3 NA chr11 119372706 119381613 + 8908 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-334E6.3 NA 0.012 10-20% NA NA Breast_cancer,PAAD NA NA boxplot DUXAP7 double homeobox A pseudogene 7 chr20 18642782 18643634 - 853 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DUXAP7 NA 0.012 80-90% NA NA NA NA NA boxplot AC073636.1 NA chr2 176845993 176849428 - 3436 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC073636.1 NA 0.071 40-50% Testis 4.005784455 CRC,HCC,Normal,PAAD NA NA boxplot RP3-365I19.2 NA chr1 144965025 144965135 + 111 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-365I19.2 NA 0.235 80-90% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-2H8.2 NA chr12 71793855 71799627 - 5773 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-2H8.2 NA 0.094 30-40% NA NA Normal,PAAD NA NA boxplot AC003956.1 NA chr19 15124160 15126174 + 2015 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC003956.1 NA 0.012 20-30% NA NA Breast_cancer,HCC,PAAD NA NA boxplot CTC-459F4.3 NA chr19 27793463 27918863 + 125401 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-459F4.3 exo_circ_057872,exo_circ_040563 0.882 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot AC092106.1 NA chr2 106253231 106253717 - 487 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC092106.1 NA 0.035 50-60% Testis 4.180343196 Normal NA NA boxplot HSPA8P8 heat shock protein family A (Hsp70) member 8 pseudogene 8 chr7 10451311 10453252 + 1942 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HSPA8P8 NA 0.071 0-10% Testis 4.906892038 CHD CHD(up) NA boxplot AC010149.4 NA chr2 230520594 230580006 - 59413 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC010149.4 NA 0.094 30-40% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot RP11-1348G14.1 NA chr16 28813980 28814673 - 694 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1348G14.1 NA 0.012 90-100% NA NA NA NA NA boxplot GS1-600G8.4 NA chrX 13327937 13329867 + 1931 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GS1-600G8.4 NA 0.012 20-30% Testis 4.906892038 Breast_cancer,Normal NA NA boxplot RP11-439H9.1 NA chr6 23337711 23346560 + 8850 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-439H9.1 NA 0.035 60-70% Testis 4.906892038 Normal,PAAD NA NA boxplot RP11-275N1.1 NA chr10 21340233 21372950 - 32718 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-275N1.1 NA 0.012 90-100% NA NA HCC NA NA boxplot RP11-200A1.1 NA chr3 134313576 134321171 + 7596 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-200A1.1 NA 0.024 80-90% NA NA Breast_cancer,PAAD NA NA boxplot CTC-273B12.10 NA chr19 48513207 48513660 - 454 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-273B12.10 NA 0.024 80-90% NA NA CRC,Normal NA NA boxplot RP1-161N10.1 NA chrX 125203805 125204338 - 534 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-161N10.1 NA 0.012 70-80% NA NA Breast_cancer,CRC NA NA boxplot RP11-214K3.18 NA chr12 123971457 123971714 - 258 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-214K3.18 NA 0.012 80-90% NA NA PAAD NA NA boxplot NCOR1P3 nuclear receptor corepressor 1 pseudogene 3 chr7 57599794 57610104 + 10311 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NCOR1P3 NA 0.012 20-30% Testis 4.906892038 CHD NA NA boxplot YWHAZP4 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta pseudogene 4 chr6 127355756 127356789 + 1034 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=YWHAZP4 NA 0.129 80-90% NA NA CRC,HCC,Normal,PAAD NA NA boxplot PCAT18 prostate cancer associated transcript 18 (non-protein coding) chr18 26687621 26703638 - 16018 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PCAT18 NA 0.024 20-30% NA NA CRC,PAAD NA NA boxplot RP1-149A16.16 NA chr22 32386668 32386868 + 201 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-149A16.16 NA 0.024 80-90% NA NA HCC,Normal NA NA boxplot RPS15P5 ribosomal protein S15 pseudogene 5 chr3 54626215 54626646 + 432 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPS15P5 NA 0.012 90-100% Testis 4.628240155 Breast_cancer,HCC,Normal,PAAD NA NA boxplot RP11-514F3.5 NA chr11 36386521 36388250 + 1730 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-514F3.5 NA 0.047 90-100% Spleen 4.148864098 Breast_cancer,CRC,Normal NA NA boxplot RP11-350E12.5 NA chr9 87944276 87945023 - 748 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-350E12.5 NA 0.306 70-80% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-83M16.3 NA chr5 67690033 67690437 - 405 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-83M16.3 NA 0.024 70-80% Nerve 1.682117258 CRC,HCC NA NA boxplot RP11-426C22.1 NA chr16 29204633 29205855 + 1223 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-426C22.1 NA 0.094 40-50% NA NA CRC,Normal NA NA boxplot RP11-493E12.1 NA chr2 61151433 61162105 - 10673 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-493E12.1 NA 0.012 60-70% Testis 3.877834705 PAAD NA NA boxplot RP11-54O7.18 NA chr1 1062208 1063288 - 1081 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-54O7.18 NA 0.024 70-80% NA NA Breast_cancer,HCC,PAAD NA NA boxplot RP11-1O7.1 NA chr2 173297629 173298512 + 884 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1O7.1 NA 0.012 80-90% NA NA Breast_cancer,PAAD NA NA boxplot SPDYE14P speedy/RINGO cell cycle regulator family member E14, pseudogene chr7 75309144 75315046 + 5903 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SPDYE14P NA 0.024 90-100% NA NA CRC,HCC,Normal NA NA boxplot RP11-37C7.1 NA chr15 39770559 39801333 - 30775 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-37C7.1 NA 0.118 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-556H2.1 NA chr16 79016136 79017429 + 1294 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-556H2.1 NA 0.024 70-80% NA NA CRC,Normal NA NA boxplot RP11-867G23.12 NA chr11 66334494 66339875 + 5382 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-867G23.12 NA 0.188 50-60% Spleen 4.248727954 Breast_cancer,HCC,Normal,PAAD NA NA boxplot RP11-552F3.13 NA chr17 75943832 75945142 + 1311 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-552F3.13 NA 0.059 90-100% NA NA HCC,Normal,PAAD NA NA boxplot ST13P12 suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein) pseudogene 12 chr5 82968888 82977153 + 8266 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ST13P12 NA 0.024 90-100% NA NA Breast_cancer,CRC,Normal NA NA boxplot AC006538.1 NA chr19 2727743 2729327 - 1585 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC006538.1 NA 0.224 50-60% Testis 1.378428711 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-274H2.3 NA chr3 146066344 146069185 - 2842 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-274H2.3 NA 0.153 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-226M10.3 NA chr17 57448218 57450291 + 2074 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-226M10.3 NA 0.141 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot OR2T32P olfactory receptor family 2 subfamily T member 32 pseudogene chr1 248083634 248084596 - 963 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=OR2T32P NA 0.047 30-40% NA NA Breast_cancer,HCC,Normal NA NA boxplot RP11-548H3.1 NA chr2 218633256 218634014 - 759 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-548H3.1 NA 0.541 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot HSPD1P16 heat shock protein family D (Hsp60) member 1 pseudogene 16 chr6 152705735 152706128 + 394 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HSPD1P16 NA 0.047 60-70% NA NA HCC,Normal NA NA boxplot PCCA-AS1 PCCA antisense RNA 1 chr13 100464440 100481157 - 16718 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PCCA-AS1 NA 0.012 90-100% Testis 3.895859623 CRC NA NA boxplot CTD-2288F12.1 NA chr16 18926863 18937043 + 10181 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2288F12.1 NA 0.035 20-30% NA NA CRC,HCC,Normal NA NA boxplot AC012499.1 NA chr2 177698429 177723289 + 24861 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC012499.1 NA 0.188 50-60% Kidney 2.658170974 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-363E6.3 NA chr8 81279871 81281446 - 1576 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-363E6.3 NA 0.271 50-60% Testis 3.119320076 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-654A16.3 NA chr15 98954149 99105824 - 151676 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-654A16.3 NA 0.082 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot C5orf66-AS1 C5orf66 antisense RNA 1 chr5 135038831 135040047 - 1217 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=C5orf66-AS1 NA 0.024 80-90% NA NA Breast_cancer,HCC NA NA boxplot RP11-60E8.2 NA chr12 50756892 50757433 + 542 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-60E8.2 NA 0.012 30-40% Testis 2.723248283 Breast_cancer,PAAD NA NA boxplot RP11-499O7.7 NA chr10 4995488 4997380 + 1893 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-499O7.7 NA 0.129 40-50% NA NA HCC,Normal,PAAD NA NA boxplot RP11-6B4.1 NA chr3 80993868 81095647 + 101780 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-6B4.1 NA 0.012 20-30% Liver 4.021797055 HCC NA NA boxplot RP11-946P6.6 NA chr12 110032245 110032803 + 559 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-946P6.6 NA 0.118 60-70% NA NA CRC,HCC,Normal NA NA boxplot NARSP2 asparaginyl-tRNA synthetase pseudogene 2 chr8 62110524 62119898 + 9375 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NARSP2 exo_circ_055708,exo_circ_055709 0.035 60-70% NA NA HCC,Normal,PAAD NA NA boxplot RP11-4O1.2 NA chr9 112032555 112037730 - 5176 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-4O1.2 exo_circ_002752,exo_circ_044855 0.882 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-331F4.5 NA chr16 75245994 75250077 - 4084 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-331F4.5 NA 0.024 70-80% NA NA Breast_cancer,PAAD NA NA boxplot HMGB3P22 high mobility group box 3 pseudogene 22 chr5 179679032 179694768 + 15737 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HMGB3P22 NA 0.647 10-20% Testis 1.311681196 Breast_cancer,CHD,CRC,HCC,Normal,PAAD HCC(down) NA boxplot LINC00501 long intergenic non-protein coding RNA 501 chr3 177294442 177323418 + 28977 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00501 NA 0.035 20-30% NA NA Normal,PAAD NA NA boxplot RP11-567I13.1 NA chr11 11352426 11353307 + 882 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-567I13.1 NA 0.353 0-10% NA NA HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot RP11-258O13.1 NA chr11 79604967 79612300 - 7334 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-258O13.1 NA 0.035 60-70% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot RPL34P6 ribosomal protein L34 pseudogene 6 chr1 200863808 200864152 + 345 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL34P6 NA 0.024 20-30% NA NA Normal,PAAD NA NA boxplot RP11-564D11.3 NA chr10 122879851 122898024 + 18174 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-564D11.3 exo_circ_056054 0.388 30-40% Testis 1.575728636 CRC,HCC,Normal,PAAD NA NA boxplot RP11-259K5.2 NA chr3 37241789 37244177 - 2389 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-259K5.2 NA 0.424 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-379K17.5 NA chr3 169945987 169946754 - 768 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-379K17.5 NA 0.024 90-100% NA NA CRC,Normal NA NA boxplot UBL7-AS1 UBL7 antisense RNA 1 (head to head) chr15 74461265 74481302 + 20038 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=UBL7-AS1 exo_circ_028703 0.776 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD HCC(down) NA boxplot RP11-539L10.5 NA chr4 6697861 6698809 - 949 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-539L10.5 NA 0.024 50-60% NA NA Breast_cancer,CRC,HCC NA NA boxplot AC061961.2 NA chr2 154696462 154697817 - 1356 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC061961.2 NA 0.024 50-60% Pituitary 2.145925739 Breast_cancer,Normal NA NA boxplot PSG10P pregnancy specific beta-1-glycoprotein 10, pseudogene chr19 42839368 42855718 - 16351 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PSG10P NA 0.012 50-60% Testis 3.767008391 Breast_cancer,PAAD NA NA boxplot XXbac-BPG308K3.5 NA chr6 28837869 28839006 - 1138 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=XXbac-BPG308K3.5 NA 0.035 50-60% Testis 2.145651203 Breast_cancer,CRC,HCC NA NA boxplot AC002076.10 NA chr7 93890913 93893601 + 2689 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC002076.10 NA 0.118 70-80% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP5-862P8.3 NA chr1 233295325 233295727 - 403 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-862P8.3 NA 0.059 90-100% NA NA CRC,Normal NA NA boxplot GATA6-AS1 GATA6 antisense RNA 1 (head to head) chr18 22166898 22168968 - 2071 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GATA6-AS1 exo_circ_051996 0.2 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-70C1.3 NA chr3 42785087 42852428 - 67342 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-70C1.3 NA 0.929 0-10% Artery 4.906892038 Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-145M9.6 NA chr3 179584271 179584410 - 140 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-145M9.6 NA 0.024 90-100% NA NA CRC,PAAD NA NA boxplot AJ003147.9 NA chr16 3188212 3224779 + 36568 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AJ003147.9 NA 0.024 50-60% Testis 1.670689315 HCC NA NA boxplot RP11-287D1.4 NA chr2 74130583 74135395 + 4813 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-287D1.4 NA 0.165 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC006994.1 NA chr2 210088226 210089064 + 839 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC006994.1 NA 0.012 90-100% NA NA Breast_cancer,CRC NA NA boxplot RP11-297C4.3 NA chr16 30480588 30481346 - 759 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-297C4.3 NA 0.035 70-80% NA NA Breast_cancer,Normal NA NA boxplot VDAC1P3 voltage-dependent anion channel 1 pseudogene 3 chrX 91982655 91983505 - 851 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=VDAC1P3 NA 0.024 90-100% NA NA HCC,Normal NA NA boxplot RP4-728D4.2 NA chr1 35569813 35577729 - 7917 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-728D4.2 NA 0.718 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),PAAD(down) NA boxplot RP11-44F14.1 NA chr16 53364982 53373083 - 8102 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-44F14.1 exo_circ_051707 0.929 0-10% Whole Blood 2.692822021 Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),HCC(up) NA boxplot AC124944.5 NA chr3 195836193 195860404 - 24212 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC124944.5 NA 0.012 90-100% Kidney 2.464037798 Breast_cancer,Normal NA NA boxplot AP001189.4 NA chr11 76657056 76663866 + 6811 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AP001189.4 NA 0.929 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RNASEH1P2 ribonuclease H1 pseudogene 2 chr17 16683438 16684227 + 790 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RNASEH1P2 NA 0.094 90-100% Testis 3.762546005 Breast_cancer,HCC,Normal,PAAD NA NA boxplot PGM5-AS1 PGM5 antisense RNA 1 chr9 68355189 68357852 - 2664 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PGM5-AS1 NA 0.282 20-30% Bladder 1.890129471 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CTD-2027I19.3 NA chr19 24146701 24147081 + 381 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2027I19.3 NA 0.024 80-90% NA NA HCC,Normal NA NA boxplot RP11-472N13.3 NA chr10 31693084 31707388 - 14305 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-472N13.3 NA 0.094 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CDK2AP2P1 cyclin-dependent kinase 2 associated protein 2 pseudogene 1 chr9 41280460 41280787 + 328 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CDK2AP2P1 NA 0.012 80-90% Spleen 3.196867547 HCC,Normal NA NA boxplot RP4-633I8.3 NA chr1 8798475 8799506 + 1032 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-633I8.3 NA 0.024 70-80% NA NA HCC,Normal NA NA boxplot CTB-167B5.1 NA chr7 88216660 88219226 + 2567 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTB-167B5.1 NA 0.153 70-80% Testis 2.619196637 CRC,HCC,Normal,PAAD NA NA boxplot RP11-74C13.3 NA chr1 204141408 204143009 + 1602 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-74C13.3 NA 0.012 40-50% Testis 3.729305334 Breast_cancer NA NA boxplot RP11-17A1.3 NA chr11 22829380 22945393 + 116014 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-17A1.3 NA 0.435 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot AC007278.2 NA chr2 102433957 102435340 + 1384 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC007278.2 NA 0.153 20-30% Whole Blood 1.951664799 CRC,HCC,Normal NA NA boxplot RP11-649A18.12 NA chr17 75271369 75273895 + 2527 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-649A18.12 NA 0.4 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-603J24.14 NA chr12 56150796 56158220 - 7425 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-603J24.14 NA 0.035 50-60% Testis 1.856403104 CRC,HCC,Normal,PAAD NA NA boxplot CTD-3076O17.2 NA chr15 99976481 99980774 + 4294 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-3076O17.2 NA 0.012 70-80% Testis 1.288298446 NA NA NA boxplot RP11-413E6.2 NA chr3 75590298 75590649 - 352 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-413E6.2 NA 0.012 30-40% NA NA Breast_cancer,PAAD NA NA boxplot RP11-153K11.3 NA chr10 68233251 68242379 - 9129 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-153K11.3 NA 0.012 90-100% Liver 1.880128756 Normal NA NA boxplot MIR4500HG MIR4500 host gene chr13 87427214 87671259 - 244046 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MIR4500HG NA 0.047 60-70% Nerve 1.776985021 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-154J22.1 NA chr15 48312353 48331856 - 19504 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-154J22.1 NA 0.282 20-30% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot LL22NC03-2H8.5 NA chr22 22283928 22287220 - 3293 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LL22NC03-2H8.5 NA 0.541 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(up),HCC(down),PAAD(up) NA boxplot ARNTL2-AS1 ARNTL2 antisense RNA 1 chr12 27389789 27446625 - 56837 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ARNTL2-AS1 NA 0.071 30-40% NA NA HCC,Normal,PAAD NA NA boxplot AC034187.2 NA chr3 8573726 8593124 - 19399 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC034187.2 NA 0.012 50-60% NA NA PAAD NA NA boxplot RP11-171I2.1 NA chr2 178723457 178727046 + 3590 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-171I2.1 NA 0.024 40-50% Heart 1.296528605 CRC NA NA boxplot RP11-538P18.2 NA chr3 158545220 158571066 - 25847 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-538P18.2 NA 0.212 50-60% Testis 4.906892038 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP3-393E18.2 NA chr6 159586955 159589169 - 2215 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-393E18.2 exo_circ_047476 0.247 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot PP12613 uncharacterized LOC100192379 chr4 121764585 121766814 + 2230 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PP12613 NA 0.035 70-80% NA NA Breast_cancer,HCC,Normal NA NA boxplot MT1JP metallothionein 1J, pseudogene chr16 56635739 56637086 + 1348 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MT1JP NA 0.024 60-70% NA NA Breast_cancer,CRC,Normal NA NA boxplot CTC-529P8.1 NA chr5 149063317 149109787 + 46471 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-529P8.1 NA 0.459 10-20% Testis 2.595813164 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-455F5.5 NA chr16 30183505 30184957 - 1453 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-455F5.5 NA 0.835 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),HCC(up),PAAD(up) NA boxplot RP11-829H16.5 NA chr14 31018446 31018796 + 351 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-829H16.5 NA 0.012 90-100% NA NA HCC NA NA boxplot RP11-134K13.2 NA chr6 70608234 70609334 - 1101 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-134K13.2 NA 0.929 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),PAAD(up) NA boxplot RP11-480I12.5 NA chr1 202851828 202861620 - 9793 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-480I12.5 NA 0.118 20-30% NA NA Breast_cancer,CRC,HCC,PAAD NA NA boxplot RP11-475A13.1 NA chr15 36438972 36471016 - 32045 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-475A13.1 NA 0.024 70-80% Prostate 2.55922202 Breast_cancer,HCC,PAAD NA NA boxplot RP11-410E4.1 NA chr2 186354570 186356773 - 2204 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-410E4.1 exo_circ_053629 0.071 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-303E16.2 NA chr16 81030770 81031485 + 716 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-303E16.2 NA 0.518 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AE000660.4 NA chr14 22011910 22014964 + 3055 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AE000660.4 NA 0.024 80-90% Testis 4.906892038 Breast_cancer,Normal NA NA boxplot RP11-17E2.2 NA chr4 21949015 22330330 + 381316 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-17E2.2 NA 0.024 60-70% NA NA Breast_cancer,Normal,PAAD NA NA boxplot RP11-686D22.8 NA chr17 35406684 35409768 - 3085 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-686D22.8 exo_circ_051828 0.894 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP4-555D20.2 NA chr3 44117299 44122365 + 5067 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-555D20.2 NA 0.035 70-80% Thyroid 3.381229169 Breast_cancer,CRC,PAAD NA NA boxplot RP11-746M1.8 NA chr17 20983902 20984046 + 145 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-746M1.8 NA 0.012 70-80% Testis 4.906892038 Breast_cancer,CRC,HCC,Normal NA NA boxplot CICP27 capicua transcriptional repressor pseudogene 27 chr1 131025 134836 + 3812 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CICP27 NA 0.035 70-80% Whole Blood 2.025198215 Breast_cancer,Normal NA NA boxplot AC141928.1 NA chr4 3758748 3763390 - 4643 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC141928.1 NA 0.071 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-10G12.1 NA chr4 22594196 22594450 + 255 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-10G12.1 NA 0.071 90-100% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-567M16.3 NA chr18 79638928 79679745 - 40818 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-567M16.3 NA 0.012 50-60% Testis 4.712541076 Breast_cancer,HCC,Normal NA NA boxplot RP11-44N21.4 NA chr14 105152194 105181194 - 29001 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-44N21.4 NA 0.153 70-80% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot VPS26BP1 VPS26B pseudogene 1 chr3 47960327 47961081 - 755 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=VPS26BP1 NA 0.082 40-50% Testis 4.039902661 CRC,Normal NA NA boxplot RP5-965G21.3 NA chr20 25229150 25231933 + 2784 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-965G21.3 NA 0.141 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-466A19.7 NA chr17 32518322 32518934 - 613 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-466A19.7 NA 0.035 10-20% NA NA CRC,HCC,Normal NA NA boxplot CTD-2373H9.5 NA chr17 78903263 78905024 + 1762 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2373H9.5 NA 0.012 50-60% Testis 2.002277804 Breast_cancer,CRC NA NA boxplot RP11-231E4.5 NA chr18 74504766 74505248 + 483 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-231E4.5 NA 0.047 80-90% NA NA CRC,Normal NA NA boxplot CTD-2530N21.4 NA chr8 22254576 22275162 - 20587 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2530N21.4 NA 0.012 40-50% NA NA PAAD NA NA boxplot ATF4P4 activating transcription factor 4 pseudogene 4 chr11 113789231 113791366 + 2136 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ATF4P4 NA 0.447 80-90% Testis 1.173100546 Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot FDPSP3 farnesyl diphosphate synthase pseudogene 3 chr14 54884849 54886213 - 1365 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FDPSP3 NA 0.141 40-50% Liver 3.085535521 Breast_cancer,CRC,Normal,PAAD NA NA boxplot AF127577.10 NA chr21 14961309 14964233 + 2925 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AF127577.10 NA 0.129 70-80% NA NA HCC,Normal,PAAD NA NA boxplot RP3-402G11.26 NA chr22 50199090 50200837 - 1748 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-402G11.26 NA 0.329 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-573D15.9 NA chr3 186781780 186784179 - 2400 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-573D15.9 NA 0.388 30-40% Testis 1.458830483 CRC,HCC,Normal,PAAD NA NA boxplot SRD5A3P1 steroid 5 alpha-reductase 3 pseudogene 1 chr11 59898185 59899133 + 949 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SRD5A3P1 NA 0.012 40-50% NA NA Breast_cancer,Normal NA NA boxplot RP11-627J17.1 NA chr3 33144104 33147721 - 3618 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-627J17.1 NA 0.235 10-20% NA NA HCC,Normal,PAAD NA NA boxplot AC068831.10 NA chr15 91022619 91036611 + 13993 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC068831.10 NA 0.094 70-80% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot RP11-1348G14.6 NA chr16 28749959 28750595 - 637 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1348G14.6 NA 0.153 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-338C15.2 NA chr1 212647296 212647755 + 460 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-338C15.2 NA 0.012 20-30% Testis 3.990933316 Normal NA NA boxplot ANKRD20A10P ankyrin repeat domain 20 family member A10, pseudogene chr13 24750657 24752171 - 1515 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ANKRD20A10P NA 0.012 30-40% Testis 4.653675373 Normal NA NA boxplot RPL7AP73 ribosomal protein L7a pseudogene 73 chr13 22803296 22803648 + 353 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL7AP73 NA 0.012 80-90% NA NA HCC NA NA boxplot CTD-2538G9.5 NA chr19 16844025 16846473 + 2449 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2538G9.5 NA 0.047 70-80% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot RP3-406P24.4 NA chr6 4018713 4019202 + 490 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-406P24.4 NA 0.165 70-80% Testis 1.272336473 CRC,HCC,Normal,PAAD NA NA boxplot SERTAD4-AS1 SERTAD4 antisense RNA 1 chr1 210231456 210234047 - 2592 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SERTAD4-AS1 NA 0.729 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down),CRC(down) NA boxplot SNRPGP2 small nuclear ribonucleoprotein polypeptide G pseudogene 2 chr18 54406889 54407114 - 226 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SNRPGP2 NA 0.541 70-80% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-474N24.6 NA chr18 9912316 9912849 - 534 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-474N24.6 NA 0.376 10-20% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-73M7.1 NA chr1 31571585 31575573 - 3989 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-73M7.1 NA 0.035 50-60% NA NA Breast_cancer,HCC NA NA boxplot RP1-257I20.14 NA chr22 42089630 42090028 - 399 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-257I20.14 NA 0.094 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot KRT8P4 keratin 8 pseudogene 4 chr8 89412621 89415071 - 2451 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KRT8P4 NA 0.024 20-30% NA NA Breast_cancer,PAAD NA NA boxplot RP11-584P21.2 NA chr4 67417305 67468251 - 50947 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-584P21.2 NA 0.059 60-70% Testis 1.003563608 CRC,HCC NA NA boxplot DDX18P1 DEAD-box helicase 18 pseudogene 1 chr14 69083398 69085389 + 1992 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DDX18P1 NA 0.424 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot LPP-AS1 LPP antisense RNA 1 chr3 188562238 188568666 - 6429 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LPP-AS1 NA 0.012 20-30% Testis 4.86341733 HCC,Normal NA NA boxplot AC109333.10 NA chr17 5019214 5020093 - 880 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC109333.10 NA 0.341 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot LINC01143 long intergenic non-protein coding RNA 1143 chr2 70887871 70889959 + 2089 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01143 NA 0.035 30-40% NA NA Breast_cancer,Normal NA NA boxplot RP11-330A16.1 NA chr6 14597514 14599690 - 2177 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-330A16.1 NA 0.365 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot ACTG1P20 actin gamma 1 pseudogene 20 chr1 27325329 27325796 + 468 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ACTG1P20 NA 0.224 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-1216L17.1 NA chr2 130681228 130691691 + 10464 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1216L17.1 NA 0.012 50-60% NA NA PAAD NA NA boxplot RP11-563P16.1 NA chr11 103675994 103895271 - 219278 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-563P16.1 exo_circ_033944 0.082 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-390F4.6 NA chr9 6645956 6670635 + 24680 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-390F4.6 NA 0.094 20-30% NA NA Breast_cancer,CRC,HCC,PAAD NA NA boxplot RP11-229D13.3 NA chr7 76043977 76045963 - 1987 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-229D13.3 NA 0.129 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC005786.6 NA chr19 3567278 3567959 - 682 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC005786.6 NA 0.012 70-80% NA NA NA NA NA boxplot HCG11 HLA complex group 11 (non-protein coding) chr6 26523450 26526579 + 3130 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HCG11 NA 0.965 0-10% NA NA CHD,CRC,HCC,Normal,PAAD CHD(up),CRC(down),HCC(down) NA boxplot RP1-34B20.4 NA chr6 26202156 26202654 + 499 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-34B20.4 NA 0.6 10-20% NA NA CRC,HCC,Normal,PAAD CHD(down),HCC(down) NA boxplot RP11-6N17.4 NA chr17 47891255 47895812 - 4558 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-6N17.4 NA 0.424 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-304F15.3 NA chr17 49845910 49848837 + 2928 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-304F15.3 NA 0.224 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CTD-3194G12.2 NA chr17 36722583 36726340 + 3758 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-3194G12.2 NA 0.212 60-70% Testis 3.822459276 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP5-908M14.10 NA chr20 62402236 62405935 - 3700 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-908M14.10 NA 0.094 60-70% NA NA Breast_cancer,CRC,Normal NA NA boxplot RP4-644L1.2 NA chr20 40696499 40698616 - 2118 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-644L1.2 NA 0.024 70-80% NA NA Breast_cancer,Normal NA NA boxplot RP11-747H7.3 NA chr14 91752856 91759798 - 6943 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-747H7.3 NA 0.518 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-192P3.4 NA chr10 31187883 31261910 + 74028 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-192P3.4 NA 0.012 10-20% NA NA Breast_cancer,Normal NA NA boxplot TLK2P1 tousled like kinase 2 pseudogene 1 chr17 34036681 34039872 - 3192 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TLK2P1 NA 1 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down),PAAD(down) NA boxplot RP11-332H18.5 NA chr17 61361668 61400243 - 38576 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-332H18.5 NA 0.024 80-90% NA NA CRC,HCC NA NA boxplot XXyac-YX155B6.7 NA chr1 148011799 148012228 + 430 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=XXyac-YX155B6.7 NA 0.035 70-80% NA NA Normal,PAAD NA NA boxplot RPSAP36 ribosomal protein SA pseudogene 36 chr4 143424753 143426013 + 1261 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPSAP36 NA 0.094 80-90% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot LINC01501 long intergenic non-protein coding RNA 1501 chr9 90463524 90582744 - 119221 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01501 NA 0.012 10-20% NA NA Breast_cancer,HCC NA NA boxplot KB-318B8.7 NA chr22 24101689 24103354 + 1666 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KB-318B8.7 NA 0.153 40-50% NA NA Breast_cancer,CRC,Normal,PAAD NA NA boxplot RP11-123O10.1 NA chr12 67065018 67065278 - 261 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-123O10.1 NA 0.012 50-60% NA NA Breast_cancer NA NA boxplot RP5-1147A1.2 NA chr7 40107288 40107454 + 167 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-1147A1.2 NA 0.012 30-40% NA NA CRC,Normal NA NA boxplot RP13-554M15.5 NA chr12 132621999 132622973 - 975 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP13-554M15.5 NA 0.047 20-30% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot RP11-374P20.4 NA chr9 134054290 134058805 + 4516 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-374P20.4 NA 0.024 60-70% Testis 2.476054564 Breast_cancer,HCC NA NA boxplot CTD-2583P5.1 NA chr16 12745873 12757835 + 11963 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2583P5.1 NA 0.012 90-100% Testis 4.906892038 CRC NA NA boxplot AC005304.1 NA chr17 13932720 13940594 - 7875 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC005304.1 NA 0.024 50-60% Testis 1.941927547 HCC,Normal,PAAD NA NA boxplot RP11-27M24.1 NA chr16 10529440 10532082 + 2643 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-27M24.1 NA 0.059 90-100% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot CTD-2562J17.7 NA chr11 75260127 75261025 + 899 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2562J17.7 NA 0.388 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-645C24.5 NA chr16 21794095 21795759 - 1665 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-645C24.5 NA 0.153 10-20% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP5-958B11.1 NA chr7 148543677 148572177 - 28501 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-958B11.1 NA 0.024 40-50% NA NA HCC,Normal NA NA boxplot RP11-379K17.2 NA chr3 169931998 169933229 + 1232 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-379K17.2 NA 0.012 80-90% NA NA Breast_cancer,HCC NA NA boxplot RP11-499F19.3 NA chr4 183762115 183765721 - 3607 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-499F19.3 NA 0.235 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot TRG-AS1 T cell receptor gamma locus antisense RNA 1 chr7 38341577 38378804 + 37228 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TRG-AS1 exo_circ_022238 0.988 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot LINC00544 long intergenic non-protein coding RNA 544 chr13 29935905 29950488 + 14584 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00544 NA 0.082 50-60% Testis 4.031517341 Breast_cancer,CRC,HCC,Normal NA NA boxplot FRMPD2B FERM and PDZ domain containing 2B, pseudogene chr10 46870858 46894562 + 23705 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FRMPD2B NA 0.012 0-10% NA NA Breast_cancer,CRC,PAAD NA NA boxplot RP11-65E22.2 NA chr3 132386522 132389074 + 2553 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-65E22.2 NA 0.082 70-80% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CH507-145C22.1 uncharacterized LOC105379493 chr21 6318434 6360415 + 41982 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CH507-145C22.1 NA 0.776 10-20% NA NA CRC,HCC,Normal,PAAD PAAD(up) NA boxplot RP3-467N11.1 NA chr6 100881471 100882987 + 1517 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-467N11.1 NA 0.388 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CR848007.2 NA chr9 42901238 42920095 + 18858 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CR848007.2 NA 0.082 30-40% Testis 1.129688855 CRC,HCC,Normal,PAAD NA NA boxplot RP11-327P2.5 NA chr13 51803838 51813832 + 9995 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-327P2.5 NA 0.482 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-488C13.6 NA chr14 76774284 76781518 - 7235 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-488C13.6 NA 0.471 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CTB-76P12.1 NA chr5 159484130 159511687 - 27558 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTB-76P12.1 NA 0.012 70-80% NA NA HCC,PAAD NA NA boxplot RBMX2P5 RNA binding motif protein, X-linked 2 pseudogene 5 chr5 80331573 80332541 - 969 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RBMX2P5 NA 0.106 90-100% Testis 4.87456433 Breast_cancer,CHD,CRC,HCC,PAAD NA NA boxplot ADCY10P1 adenylate cyclase 10 (soluble) pseudogene 1 chr6 41101022 41140835 + 39814 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ADCY10P1 NA 0.6 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CRC(up),PAAD(up) NA boxplot NPM1P27 nucleophosmin 1 (nucleolar phosphoprotein B23, numatrin) pseudogene 27 chr5 93682838 93683667 - 830 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NPM1P27 NA 1 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down),CRC(down) NA boxplot LYPLA1P3 lysophospholipase I pseudogene 3 chr6 71165076 71165770 + 695 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LYPLA1P3 NA 0.941 40-50% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-433M22.2 NA chr17 48460370 48466040 + 5671 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-433M22.2 NA 0.047 0-10% Testis 4.394609787 CRC,HCC HCC(up) NA boxplot RP11-815M8.1 NA chr1 221880981 221978523 - 97543 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-815M8.1 NA 0.082 60-70% NA NA Breast_cancer,CRC,HCC,PAAD NA NA boxplot LINC01225 long intergenic non-protein coding RNA 1225 chr1 31500085 31509648 + 9564 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01225 NA 0.012 90-100% NA NA Breast_cancer,CRC,HCC NA NA boxplot RP11-523O18.1 NA chr10 48984564 49018897 + 34334 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-523O18.1 NA 0.059 40-50% NA NA Breast_cancer,CRC,Normal NA NA boxplot RP11-644F5.11 NA chr12 55729104 55730852 + 1749 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-644F5.11 NA 0.918 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),HCC(up) NA boxplot RP11-332H14.1 NA chr2 105249404 105249794 - 391 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-332H14.1 NA 0.024 90-100% NA NA Breast_cancer,CRC,PAAD NA NA boxplot RP11-121C2.3 NA chr4 47831385 47896709 + 65325 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-121C2.3 NA 0.035 50-60% NA NA HCC,Normal,PAAD NA NA boxplot RP3-414A15.11 NA chr14 73517233 73520648 - 3416 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-414A15.11 NA 0.012 90-100% NA NA Breast_cancer,Normal NA NA boxplot RP11-817J15.2 NA chr11 102606916 102628070 + 21155 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-817J15.2 NA 0.024 40-50% NA NA CRC,Normal NA NA boxplot RP5-1014D13.2 NA chr22 37876148 37895563 + 19416 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-1014D13.2 NA 0.929 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),PAAD(down) NA boxplot RP11-359E10.1 NA chr11 19710934 19712619 - 1686 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-359E10.1 NA 0.059 40-50% NA NA Breast_cancer,CRC,Normal NA NA boxplot PABPC1L2B-AS1 PABPC1L2B antisense RNA 1 (head to head) chrX 73080167 73084635 + 4469 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PABPC1L2B-AS1 NA 0.024 60-70% NA NA CRC,HCC,PAAD NA NA boxplot RP11-80H5.2 NA chr10 89645282 89650667 + 5386 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-80H5.2 NA 0.012 70-80% Testis 2.029490768 Breast_cancer NA NA boxplot KRT18P5 keratin 18 pseudogene 5 chr22 20482815 20484105 - 1291 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KRT18P5 NA 0.176 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-193H5.1 NA chr1 237862175 237928321 + 66147 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-193H5.1 NA 0.012 80-90% Testis 4.499986234 Breast_cancer,PAAD NA NA boxplot AC005197.2 NA chr19 18881680 18883376 + 1697 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC005197.2 NA 0.012 40-50% NA NA Breast_cancer,PAAD NA NA boxplot LINC00342 long intergenic non-protein coding RNA 342 chr2 95807118 95816215 - 9098 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00342 NA 0.471 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD PAAD(up) NA boxplot RP11-312J18.3 NA chr1 160848010 160848502 + 493 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-312J18.3 NA 0.012 60-70% NA NA CRC NA NA boxplot RP1-20C7.6 NA chr6 43033897 43034405 - 509 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-20C7.6 NA 0.047 60-70% NA NA CRC,Normal NA NA boxplot RP13-516M14.4 NA chr17 82290046 82292814 - 2769 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP13-516M14.4 NA 0.024 80-90% Testis 1.673220744 CRC,HCC,Normal NA NA boxplot OR51A10P olfactory receptor family 51 subfamily A member 10 pseudogene chr11 5468486 5469422 - 937 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=OR51A10P NA 0.012 0-10% Testis 4.906892038 NA NA NA boxplot RP11-544A12.5 NA chr9 131240687 131241724 + 1038 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-544A12.5 NA 0.024 30-40% NA NA Breast_cancer,PAAD NA NA boxplot RP11-521B24.4 NA chr14 105370418 105372918 + 2501 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-521B24.4 NA 0.4 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CTB-167G5.6 NA chr19 53599628 53608451 - 8824 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTB-167G5.6 NA 0.024 20-30% NA NA Breast_cancer,Normal,PAAD NA NA boxplot RP11-378J18.10 NA chr1 222510169 222519732 - 9564 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-378J18.10 NA 0.082 70-80% NA NA CRC,PAAD NA NA boxplot RP11-33B1.1 NA chr4 119454791 119552025 + 97235 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-33B1.1 NA 0.918 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),PAAD(up) NA boxplot SPDYE18 speedy/RINGO cell cycle regulator family member E18 chr7 77052785 77060512 - 7728 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SPDYE18 NA 0.376 30-40% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-95D17.1 NA chr2 9936360 9939590 + 3231 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-95D17.1 NA 0.847 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down) NA boxplot AOAH-IT1 AOAH intronic transcript 1 chr7 36597834 36600120 - 2287 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AOAH-IT1 exo_circ_008995,exo_circ_039184 0.341 30-40% Whole Blood 3.543019859 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot LINC01532 long intergenic non-protein coding RNA 1532 chr19 29002555 29013955 + 11401 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01532 NA 0.012 80-90% NA NA Breast_cancer,PAAD NA NA boxplot RP11-5P22.1 NA chr5 66572057 66572546 + 490 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-5P22.1 NA 0.012 70-80% NA NA HCC NA NA boxplot RP11-995C19.2 NA chr17 46503946 46509339 + 5394 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-995C19.2 NA 0.212 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot AC000081.2 NA chr22 19238443 19238739 - 297 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC000081.2 NA 0.024 90-100% NA NA PAAD NA NA boxplot DNM1P35 dynamin 1 pseudogene 35 chr15 75727670 75738623 - 10954 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DNM1P35 NA 0.012 90-100% NA NA Breast_cancer,HCC,PAAD NA NA boxplot RP11-266K4.13 NA chr12 8205984 8207397 + 1414 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-266K4.13 NA 0.012 80-90% NA NA NA NA NA boxplot FAM86FP family with sequence similarity 86, member A pseudogene chr12 8232512 8242948 - 10437 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FAM86FP NA 0.341 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up) NA boxplot B3GALT5-AS1 B3GALT5 antisense RNA 1 chr21 39597147 39612821 - 15675 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=B3GALT5-AS1 NA 0.035 10-20% NA NA Breast_cancer,HCC,PAAD NA NA boxplot RPL32P29 ribosomal protein L32 pseudogene 29 chr14 49577392 49577794 - 403 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL32P29 NA 0.965 0-10% NA NA CHD,CRC,HCC,Normal,PAAD CHD(down),CRC(down),PAAD(down) NA boxplot RP11-464F9.21 NA chr10 73654039 73674719 + 20681 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-464F9.21 NA 0.047 30-40% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot RP11-282A11.2 NA chr13 106941950 106942561 - 612 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-282A11.2 NA 0.012 80-90% NA NA CRC NA NA boxplot RP11-1246C19.1 NA chr7 1464497 1467522 - 3026 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1246C19.1 NA 0.141 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-379K22.3 NA chr15 80580029 80580566 - 538 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-379K22.3 NA 0.012 80-90% Testis 2.638159632 HCC NA NA boxplot LINC01354 long intergenic non-protein coding RNA 1354 chr1 234527891 234531779 - 3889 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01354 NA 0.071 30-40% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot RP3-406P24.3 NA chr6 4018843 4021215 - 2373 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-406P24.3 NA 0.082 80-90% Testis 2.796151817 HCC,Normal NA NA boxplot BLACAT1 bladder cancer associated transcript 1 (non-protein coding) chr1 205434886 205437879 - 2994 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=BLACAT1 NA 0.035 50-60% NA NA Breast_cancer,HCC,PAAD NA NA boxplot KRT8P10 keratin 8 pseudogene 10 chr2 183071040 183072486 - 1447 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KRT8P10 exo_circ_048572 0.341 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-459F6.3 NA chr16 58129529 58159133 + 29605 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-459F6.3 NA 0.247 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP4-680D5.8 NA chr1 15565611 15565956 - 346 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-680D5.8 NA 0.094 30-40% Liver 1.276683803 HCC,Normal,PAAD NA NA boxplot RP11-33I11.2 NA chr8 60808735 60809606 - 872 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-33I11.2 NA 0.012 90-100% NA NA HCC NA NA boxplot RP11-403B2.6 NA chr15 20759311 20774794 - 15484 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-403B2.6 NA 0.071 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot KB-1836B5.1 NA chr8 38062881 38063791 + 911 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KB-1836B5.1 NA 0.082 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot PRNCR1 prostate cancer associated non-coding RNA 1 chr8 127079874 127092600 + 12727 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PRNCR1 NA 0.365 30-40% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA Yes boxplot RP11-399K21.14 NA chr10 75409157 75411842 + 2686 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-399K21.14 NA 0.035 0-10% NA NA Breast_cancer,Normal,PAAD NA NA boxplot AP000560.3 NA chr11 74830574 74832510 - 1937 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AP000560.3 NA 0.376 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CD177P1 CD177 molecule pseudogene 1 chr19 43372742 43379123 - 6382 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CD177P1 NA 0.094 10-20% Whole Blood 3.762594889 Breast_cancer,CHD,CRC,HCC,PAAD NA NA boxplot OR4F2P olfactory receptor family 4 subfamily F member 2 pseudogene chr11 86649 87586 - 938 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=OR4F2P NA 0.012 80-90% NA NA NA NA NA boxplot SUCLA2-AS1 SUCLA2 antisense RNA 1 chr13 48001389 48002552 + 1164 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SUCLA2-AS1 NA 0.035 10-20% NA NA Breast_cancer,CRC,Normal NA NA boxplot RP13-631K18.3 NA chr11 12066929 12073014 + 6086 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP13-631K18.3 NA 0.012 40-50% Testis 3.735028357 Breast_cancer NA NA boxplot RP11-1070N10.7 NA chr14 95644508 95645232 + 725 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1070N10.7 NA 0.035 50-60% Testis 4.665381339 CRC,Normal NA NA boxplot RP11-170N16.2 NA chr4 122840343 122840690 + 348 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-170N16.2 NA 0.012 10-20% NA NA NA NA NA boxplot OSER1-AS1 OSER1 antisense RNA 1 (head to head) chr20 44210960 44226027 + 15068 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=OSER1-AS1 NA 0.941 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down),HCC(down) NA boxplot RP11-44F14.9 NA chr16 53389886 53390563 + 678 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-44F14.9 NA 0.118 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CTSLP1 cathepsin L pseudogene 1 chr10 87386685 87390203 - 3519 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTSLP1 NA 0.012 90-100% NA NA Breast_cancer,CRC,Normal NA NA boxplot RP11-111M22.3 NA chr11 76441338 76444656 - 3319 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-111M22.3 NA 0.647 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),PAAD(down) NA boxplot RP11-1060G2.1 NA chr12 93894965 93943603 - 48639 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1060G2.1 NA 0.024 10-20% NA NA Breast_cancer,Normal NA NA boxplot ST13P6 suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein) pseudogene 6 chr8 133408006 133409107 + 1102 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ST13P6 NA 1 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down),CRC(down) NA boxplot ARPC3P2 actin related protein 2/3 complex subunit 3 pseudogene 2 chr1 211442274 211442806 + 533 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ARPC3P2 NA 0.024 70-80% NA NA PAAD NA NA boxplot RP11-6L6.4 NA chr4 146180851 146181316 + 466 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-6L6.4 NA 0.071 30-40% NA NA CRC,HCC,Normal NA NA boxplot RPL7L1P3 ribosomal protein L7 like 1 pseudogene 3 chr7 75922755 75923443 + 689 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL7L1P3 NA 0.106 30-40% Liver 1.063369277 CHD,CRC,HCC,PAAD NA NA boxplot CTD-2232E5.2 NA chr5 89466537 89470039 - 3503 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2232E5.2 NA 0.024 20-30% NA NA Normal NA NA boxplot RP5-1014O16.9 NA chrX 149757797 149757895 + 99 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-1014O16.9 NA 0.024 20-30% NA NA HCC NA NA boxplot CTB-92J24.3 NA chr19 23919081 23957930 - 38850 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTB-92J24.3 NA 0.059 30-40% Cervix 1.923132823 CRC,Normal,PAAD NA NA boxplot RP5-1139B12.2 NA chr1 228270443 228274397 - 3955 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-1139B12.2 NA 0.553 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot LINC00909 long intergenic non-protein coding RNA 909 chr18 74591774 74598508 - 6735 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00909 NA 0.965 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up) NA boxplot RP11-1365D11.1 NA chr4 201409 205009 - 3601 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1365D11.1 NA 0.024 10-20% NA NA Breast_cancer,Normal NA NA boxplot RP11-778J16.2 NA chr12 94521090 94521869 - 780 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-778J16.2 NA 0.118 90-100% NA NA HCC,Normal,PAAD NA NA boxplot RPS10P3 ribosomal protein S10 pseudogene 3 chr9 88016300 88016793 + 494 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPS10P3 NA 0.988 10-20% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot OR10D1P olfactory receptor family 10 subfamily D member 1 pseudogene chr11 124158421 124159356 + 936 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=OR10D1P NA 0.012 30-40% NA NA Breast_cancer NA NA boxplot AC062028.1 NA chr2 11105317 11132821 - 27505 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC062028.1 NA 0.024 30-40% NA NA Breast_cancer,Normal NA NA boxplot CTC-497E21.3 NA chr11 13001090 13009159 - 8070 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-497E21.3 NA 0.012 10-20% NA NA Breast_cancer NA NA boxplot RP4-742C19.12 NA chr22 39091586 39092855 + 1270 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-742C19.12 NA 0.565 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot WARSP1 tryptophanyl-tRNA synthetase pseudogene 1 chr11 59255360 59259486 + 4127 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=WARSP1 NA 0.047 70-80% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot RP11-123C21.2 NA chr15 58672296 58672933 + 638 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-123C21.2 NA 0.012 80-90% NA NA HCC NA NA boxplot MED28P5 mediator complex subunit 28 pseudogene 5 chr11 97000274 97000711 - 438 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MED28P5 NA 0.012 70-80% NA NA Normal NA NA boxplot CTD-2215L10.1 NA chr5 9001774 9045940 + 44167 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2215L10.1 NA 0.012 90-100% Nerve 4.906892038 HCC NA NA boxplot RP11-177G23.1 NA chr6 79573877 79575530 + 1654 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-177G23.1 NA 0.024 40-50% NA NA PAAD NA NA boxplot RP5-881P19.7 NA chr1 228073909 228076550 - 2642 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-881P19.7 NA 0.071 60-70% NA NA Breast_cancer,CRC,Normal NA NA boxplot RP11-644F5.15 NA chr12 55654558 55655168 - 611 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-644F5.15 NA 0.012 10-20% NA NA PAAD NA NA boxplot NDUFS5P5 NADH:ubiquinone oxidoreductase subunit S5 pseudogene 5 chr4 118400514 118400834 - 321 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NDUFS5P5 NA 0.012 90-100% NA NA Breast_cancer,CRC NA NA boxplot RP11-1378G18.1 NA chr2 87980714 87992858 - 12145 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1378G18.1 exo_circ_003511 0.024 30-40% NA NA CRC,Normal NA NA boxplot RP11-424G14.1 NA chrY 19691941 19694606 - 2666 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-424G14.1 NA 0.118 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-1105O14.1 NA chr8 19678572 19688934 + 10363 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1105O14.1 NA 0.035 10-20% NA NA Normal,PAAD NA NA boxplot RP5-1098D14.1 NA chr1 178651706 178652282 + 577 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-1098D14.1 NA 0.153 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CTD-2272G21.2 NA chr5 23303565 23305143 - 1579 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2272G21.2 NA 0.059 90-100% NA NA HCC,Normal NA NA boxplot CPSF1P1 cleavage and polyadenylation specific factor 1 pseudogene 1 chr22 32269381 32273110 + 3730 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CPSF1P1 exo_circ_011576 0.659 10-20% Prostate 1.163163229 Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up),CRC(up),HCC(down),PAAD(up) NA boxplot LINC00652 long intergenic non-protein coding RNA 652 chr20 18786065 18794335 - 8271 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00652 NA 0.035 70-80% NA NA Breast_cancer,HCC,PAAD NA NA boxplot CSPG4P13 chondroitin sulfate proteoglycan 4 pseudogene 13 chr15 77894684 77904674 + 9991 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CSPG4P13 NA 0.024 10-20% NA NA Breast_cancer,Normal,PAAD NA NA boxplot RP11-403I13.4 NA chr1 143745249 143757452 + 12204 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-403I13.4 NA 0.412 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD HCC(up) NA boxplot SNRK-AS1 SNRK antisense RNA 1 chr3 43349644 43351962 - 2319 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SNRK-AS1 NA 0.306 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot RP11-20I23.8 NA chr16 2561471 2565096 - 3626 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-20I23.8 NA 0.576 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot NCAM1-AS1 NCAM1 antisense RNA1 chr11 113269532 113273901 - 4370 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NCAM1-AS1 NA 0.024 30-40% NA NA Breast_cancer,CRC,PAAD NA NA boxplot LINC00582 long intergenic non-protein coding RNA 582 chr1 231591292 231612090 - 20799 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00582 NA 0.071 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot EEF1A1P19 eukaryotic translation elongation factor 1 alpha 1 pseudogene 19 chr5 43495073 43496454 - 1382 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=EEF1A1P19 NA 0.871 50-60% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-944L7.4 NA chr3 44557357 44685653 - 128297 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-944L7.4 NA 0.047 50-60% NA NA HCC,Normal NA NA boxplot LINC00866 long intergenic non-protein coding RNA 866 chr10 97828478 97849798 - 21321 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00866 NA 0.141 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot FBXL19-AS1 FBXL19 antisense RNA 1 (head to head) chr16 30919319 30923269 - 3951 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FBXL19-AS1 NA 0.765 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up),HCC(up) NA boxplot SDR42E1P5 short chain dehydrogenase/reductase family 42E, member 1 pseudogene 5 chr2 102411243 102412108 + 866 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SDR42E1P5 NA 0.012 90-100% NA NA CRC NA NA boxplot RRM2P3 ribonucleotide reductase M2 polypeptide pseudogene 3 chrX 44309314 44310476 - 1163 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RRM2P3 NA 0.882 0-10% NA NA CHD,CRC,HCC,Normal,PAAD CHD(down),HCC(down),PAAD(down) NA boxplot MED15P5 mediator complex subunit 15 pseudogene 5 chr2 130251568 130252559 + 992 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MED15P5 NA 0.012 90-100% NA NA Breast_cancer NA NA boxplot CTD-2616J11.14 NA chr19 51394488 51403650 + 9163 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2616J11.14 NA 0.176 70-80% Testis 4.906892038 CRC,HCC,Normal,PAAD NA NA boxplot RP11-567F11.2 NA chr2 148062154 148062577 + 424 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-567F11.2 NA 0.035 60-70% NA NA CRC,Normal NA NA boxplot TPTE2P1 transmembrane phosphoinositide 3-phosphatase and tensin homolog 2 pseudogene 1 chr13 24924677 24968487 - 43811 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TPTE2P1 NA 0.071 50-60% Thyroid 1.165630467 Breast_cancer,HCC,Normal,PAAD NA NA boxplot AC009133.12 NA chr16 29808636 29821252 - 12617 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC009133.12 NA 0.824 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot RP11-586D19.2 NA chr4 6202328 6206649 + 4322 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-586D19.2 NA 0.012 90-100% Testis 3.758793053 Breast_cancer,Normal NA NA boxplot RP11-158I13.2 NA chr2 27583046 27635174 + 52129 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-158I13.2 exo_circ_032817 0.929 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot UGT1A2P UDP glucuronosyltransferase 1 family, polypeptide A2 pseudogene chr2 233747214 233748079 + 866 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=UGT1A2P NA 0.024 20-30% Liver 2.988273667 Breast_cancer,PAAD NA NA boxplot RP11-392O18.2 NA chr3 150611262 150611877 - 616 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-392O18.2 NA 0.012 30-40% NA NA Breast_cancer,Normal NA NA boxplot RP11-506F3.1 NA chr2 109758799 109760364 - 1566 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-506F3.1 NA 0.035 80-90% NA NA HCC,PAAD NA NA boxplot RP11-544L8__B.4 NA chr6 113904138 113921642 + 17505 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-544L8__B.4 NA 0.012 50-60% NA NA Breast_cancer,Normal NA NA boxplot RP11-137H2.4 NA chr10 80529597 80535942 - 6346 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-137H2.4 exo_circ_050687 0.129 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-710M11.1 NA chr18 3580169 3580754 + 586 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-710M11.1 NA 0.529 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot SMARCA5-AS1 SMARCA5 antisense RNA 1 chr4 143513472 143514635 - 1164 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SMARCA5-AS1 NA 0.447 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot RP11-66D17.5 NA chr1 156712212 156713174 - 963 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-66D17.5 exo_circ_031429 0.082 80-90% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CTD-2521M24.4 NA chr19 17417031 17418288 - 1258 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2521M24.4 NA 0.071 50-60% NA NA CRC,Normal,PAAD NA NA boxplot RPS6KA2-AS1 RPS6KA2 antisense RNA 1 chr6 166903698 166904835 + 1138 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPS6KA2-AS1 NA 0.012 50-60% Testis 4.85930418 Breast_cancer,CRC NA NA boxplot RP3-522J7.7 NA chr22 49805452 49807208 + 1757 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-522J7.7 NA 0.035 90-100% NA NA Breast_cancer,CRC,Normal NA NA boxplot HULC hepatocellular carcinoma up-regulated long non-coding RNA chr6 8653558 8653797 + 240 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HULC exo_circ_044509 0.153 0-10% Liver 4.317929361 HCC,Normal HCC(up) Yes boxplot RP11-309L24.6 NA chr7 128912732 128914063 - 1332 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-309L24.6 NA 0.012 90-100% Muscle 2.795360298 NA NA NA boxplot RP11-95F22.1 NA chr13 57632759 57633575 - 817 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-95F22.1 NA 0.129 60-70% NA NA HCC,Normal,PAAD NA NA boxplot LL0XNC01-250H12.3 uncharacterized LOC100506901 chrX 103497523 103500317 + 2795 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LL0XNC01-250H12.3 NA 0.012 60-70% NA NA NA NA NA boxplot RP11-276H1.3 NA chr16 12086746 12090302 - 3557 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-276H1.3 NA 0.012 90-100% Testis 2.499983759 Breast_cancer,CRC NA NA boxplot LINC00427 long intergenic non-protein coding RNA 427 chr13 30316360 30319903 - 3544 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00427 NA 0.012 90-100% Testis 2.458428797 CRC NA NA boxplot RPS3AP12 ribosomal protein S3a pseudogene 12 chr1 119126539 119127291 - 753 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPS3AP12 NA 0.071 30-40% Fallopian Tube 4.906892038 CRC,Normal,PAAD NA NA boxplot WNT5A-AS1 WNT5A antisense RNA 1 chr3 55487699 55488308 + 610 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=WNT5A-AS1 NA 0.024 80-90% NA NA HCC NA NA boxplot RP11-14D22.2 NA chr3 64444482 64445476 - 995 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-14D22.2 NA 0.024 90-100% NA NA HCC,Normal NA NA boxplot RP11-436F23.1 NA chr4 46390255 46433188 + 42934 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-436F23.1 NA 0.012 20-30% Brain 3.5197185 Breast_cancer,HCC NA NA boxplot RP5-1028K7.2 NA chr17 40517026 40527002 + 9977 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-1028K7.2 NA 0.8 10-20% Spleen 1.171656434 Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-15B17.4 NA chr4 99942081 99942522 - 442 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-15B17.4 NA 0.059 60-70% NA NA CRC,HCC,Normal NA NA boxplot RPL24P2 ribosomal protein L24 pseudogene 2 chr20 21114723 21115197 + 475 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL24P2 NA 1 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-464F9.22 NA chr10 73630556 73631490 + 935 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-464F9.22 NA 0.035 20-30% NA NA HCC,Normal,PAAD NA NA boxplot AC012462.2 NA chr2 215453707 215463871 + 10165 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC012462.2 NA 0.024 10-20% Testis 4.650486982 Normal,PAAD NA NA boxplot FTX FTX transcript, XIST regulator (non-protein coding) chrX 73963955 74293574 - 329620 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FTX NA 0.906 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down),CRC(up),PAAD(up) NA boxplot RP11-108P20.3 NA chr18 58752179 58753898 - 1720 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-108P20.3 NA 0.059 70-80% NA NA HCC,Normal NA NA boxplot CTB-191K22.6 NA chr19 50365880 50369331 - 3452 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTB-191K22.6 NA 0.012 90-100% NA NA CRC,PAAD NA NA boxplot RP11-637A17.2 NA chr12 68674371 68687755 - 13385 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-637A17.2 NA 0.388 30-40% Testis 1.949564951 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot LINC01278 long intergenic non-protein coding RNA 1278 chrX 63343227 63561071 - 217845 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01278 NA 1 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot AC021224.1 NA chr18 32412182 32413236 + 1055 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC021224.1 NA 0.894 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot CTD-2123J17.2 NA chr5 86305233 86306149 - 917 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2123J17.2 NA 0.235 90-100% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-46C24.7 NA chr16 89215211 89217653 - 2443 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-46C24.7 NA 0.576 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-458F8.4 NA chr7 66902857 66906297 + 3441 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-458F8.4 NA 0.518 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC009303.1 NA chr2 117995397 118055033 + 59637 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC009303.1 NA 0.212 40-50% Testis 3.333930365 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC092198.1 NA chrX 40009276 40012182 + 2907 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC092198.1 NA 0.341 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CDC27P3 cell division cycle 27 pseudogene 3 chr20 29746181 29748090 + 1910 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CDC27P3 NA 0.212 80-90% NA NA HCC,Normal NA NA boxplot LINC00466 long intergenic non-protein coding RNA 466 chr1 63159087 63317274 - 158188 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00466 NA 0.012 90-100% Testis 4.455039681 Breast_cancer NA NA boxplot CTD-2540F13.2 NA chr19 38738284 38739863 + 1580 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2540F13.2 NA 0.259 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-89K10.1 NA chr8 126557875 126713415 + 155541 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-89K10.1 NA 0.412 20-30% Testis 1.143855706 CRC,HCC,Normal,PAAD NA NA boxplot RP11-216M21.1 NA chr9 40105822 40106527 + 706 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-216M21.1 NA 0.2 20-30% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot RP11-413M3.4 NA chr9 136542881 136543835 + 955 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-413M3.4 NA 0.024 90-100% NA NA HCC,Normal NA NA boxplot RUSC1-AS1 RUSC1 antisense RNA 1 chr1 155316863 155324176 - 7314 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RUSC1-AS1 NA 0.6 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC064834.2 NA chr2 195533035 195538681 + 5647 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC064834.2 exo_circ_003378 0.129 70-80% NA NA CRC,Normal,PAAD NA NA boxplot ABCB10P4 ATP binding cassette subfamily B member 10 pseudogene 4 chr15 28506625 28508808 - 2184 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ABCB10P4 NA 0.447 50-60% Testis 4.639081594 Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot KRT18P61 keratin 18 pseudogene 61 chr17 60810165 60811462 + 1298 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KRT18P61 NA 0.129 50-60% Testis 4.906892038 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-809N8.6 NA chr11 73452020 73452344 + 325 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-809N8.6 NA 0.012 80-90% NA NA CRC NA NA boxplot RP11-384K6.6 NA chr4 118591773 118633729 + 41957 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-384K6.6 NA 0.894 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(up),PAAD(up) NA boxplot CTD-2623N2.3 NA chr19 9756152 9756863 - 712 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2623N2.3 NA 0.176 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-348N5.7 NA chr10 110910596 110912244 + 1649 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-348N5.7 NA 0.2 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CTB-55O6.4 NA chr19 14030855 14031557 - 703 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTB-55O6.4 exo_circ_052106 0.012 90-100% Testis 2.828245143 Breast_cancer,Normal NA NA boxplot RP11-157E16.1 NA chr3 7606890 7607897 - 1008 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-157E16.1 NA 0.024 10-20% NA NA Normal,PAAD NA NA boxplot PHKA2-AS1 PHKA2 antisense RNA 1 chrX 18890296 18894497 + 4202 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PHKA2-AS1 NA 0.129 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot DPY19L2P2 DPY19L2 pseudogene 2 chr7 103175133 103280410 - 105278 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DPY19L2P2 NA 0.788 10-20% Testis 3.044003569 Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-252P19.2 NA chr6 165773201 165775186 - 1986 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-252P19.2 NA 0.024 0-10% NA NA PAAD NA NA boxplot CTA-221G9.10 NA chr22 25179309 25179554 - 246 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTA-221G9.10 NA 0.012 90-100% NA NA Normal NA NA boxplot RP11-439C8.1 NA chr3 154827016 154861017 - 34002 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-439C8.1 NA 0.012 90-100% Testis 4.906892038 Normal NA NA boxplot RP11-387D10.4 NA chr15 90650631 90651103 + 473 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-387D10.4 NA 0.012 30-40% NA NA NA NA NA boxplot RP11-888D10.4 NA chr18 9259388 9260390 + 1003 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-888D10.4 NA 0.165 30-40% NA NA CRC,HCC,Normal NA NA boxplot RP11-405A12.1 NA chr12 19941521 19943018 + 1498 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-405A12.1 NA 0.012 90-100% Testis 3.90019556 CRC,HCC,Normal NA NA boxplot E2F6P4 E2F transcription factor 6 pseudogene 4 chrX 136097835 136098348 - 514 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=E2F6P4 NA 0.765 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down) NA boxplot RP11-541M12.3 NA chr10 48546472 48546713 - 242 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-541M12.3 NA 0.024 90-100% NA NA CRC,Normal NA NA boxplot AC007879.7 NA chr2 207239650 207245887 + 6238 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC007879.7 NA 0.753 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down) NA boxplot CTC-360G5.6 NA chr19 38870159 38873763 + 3605 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-360G5.6 NA 0.059 60-70% NA NA Breast_cancer,CRC,Normal NA NA boxplot AC002429.4 NA chr7 95018407 95018554 + 148 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC002429.4 exo_circ_010431 0.012 80-90% NA NA NA NA NA boxplot AF213884.2 NA chr4 102500841 102501319 - 479 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AF213884.2 NA 0.024 30-40% NA NA Breast_cancer,CRC,HCC NA NA boxplot ID2-AS1 ID2 antisense RNA 1 (head to head) chr2 8666636 8681863 - 15228 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ID2-AS1 NA 0.812 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down) NA boxplot AC132807.1 NA chr3 17990023 17995544 + 5522 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC132807.1 NA 0.012 90-100% NA NA Normal NA NA boxplot AL591893.1 NA chr1 151994531 152042774 + 48244 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AL591893.1 exo_circ_053016 0.071 70-80% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot OSBPL9P1 oxysterol binding protein like 9 pseudogene 1 chr3 80163327 80164795 + 1469 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=OSBPL9P1 NA 0.012 10-20% NA NA PAAD NA NA boxplot RP3-486I3.4 NA chr6 116258493 116259115 - 623 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-486I3.4 NA 0.059 60-70% Testis 1.011727011 HCC,Normal,PAAD NA NA boxplot NDUFA9P1 NADH:ubiquinone oxidoreductase subunit A9 pseudogene 1 chr22 35897270 35898404 - 1135 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NDUFA9P1 NA 0.024 0-10% NA NA PAAD NA NA boxplot CTD-2653B5.1 NA chr17 67524481 67525422 + 942 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2653B5.1 NA 0.047 70-80% NA NA CRC,Normal NA NA boxplot RP11-109G23.1 NA chr4 78768499 78768750 + 252 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-109G23.1 NA 0.012 50-60% Testis 4.636350815 Normal NA NA boxplot RP11-875H7.2 NA chr3 55360443 55361829 - 1387 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-875H7.2 NA 0.012 90-100% Testis 4.906892038 NA NA NA boxplot CTD-2284J15.1 NA chr8 86333274 86343314 - 10041 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2284J15.1 NA 0.247 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot ZNF667-AS1 ZNF667 antisense RNA 1 (head to head) chr19 56477250 56500666 + 23417 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ZNF667-AS1 NA 0.941 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down) NA boxplot SNHG18 small nucleolar RNA host gene 18 chr5 9546200 9550609 + 4410 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SNHG18 NA 0.153 30-40% NA NA Breast_cancer,CHD,HCC,Normal NA NA boxplot NDUFV2P1 NADH:ubiquinone oxidoreductase core subunit V2 pseudogene 1 chr19 53223973 53224879 - 907 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NDUFV2P1 NA 0.906 20-30% NA NA CHD,CRC,HCC,Normal,PAAD CHD(up),HCC(up) NA boxplot YTHDF1P1 YTH domain family member 1 pseudogene 1 chr5 97368776 97370421 + 1646 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=YTHDF1P1 NA 0.012 10-20% NA NA Breast_cancer,CRC,Normal NA NA boxplot CTC-524C5.2 NA chr17 5425139 5432876 - 7738 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-524C5.2 NA 0.306 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP1-59D14.8 NA chr17 2460183 2460294 - 112 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-59D14.8 NA 0.047 80-90% NA NA CRC NA NA boxplot RPL3P6 ribosomal protein L3 pseudogene 6 chr5 61390668 61391871 - 1204 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL3P6 NA 0.047 30-40% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot RP11-46A10.8 NA chr1 180970837 180971247 + 411 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-46A10.8 NA 0.012 60-70% NA NA Breast_cancer,Normal NA NA boxplot LINC01405 long intergenic non-protein coding RNA 1405 chr12 110936585 110958208 + 21624 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01405 NA 0.035 70-80% NA NA Breast_cancer,CRC,PAAD NA NA boxplot RP11-63I8.1 NA chr18 46385707 46387083 + 1377 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-63I8.1 NA 0.035 70-80% NA NA Breast_cancer,HCC,PAAD NA NA boxplot CTC-209H22.3 NA chr5 173144162 173145039 - 878 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-209H22.3 NA 0.024 90-100% Testis 4.906892038 HCC,Normal NA NA boxplot RP11-370A5.1 NA chr18 22723491 22907721 - 184231 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-370A5.1 NA 0.047 40-50% NA NA CRC,HCC NA NA boxplot RPL4P3 ribosomal protein L4 pseudogene 3 chr1 171683128 171684438 - 1311 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL4P3 NA 0.024 90-100% NA NA CHD,HCC,Normal NA NA boxplot EIF4A1P5 eukaryotic translation initiation factor 4A1 pseudogene 5 chr13 36938400 36939494 - 1095 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=EIF4A1P5 NA 0.012 0-10% NA NA Breast_cancer,PAAD NA NA boxplot RP1-107N3.1 NA chrX 127728734 127730858 - 2125 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-107N3.1 NA 0.012 60-70% NA NA Normal NA NA boxplot RP11-211C9.1 NA chr8 8723693 8782479 - 58787 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-211C9.1 NA 0.059 60-70% Testis 4.380137412 Breast_cancer,CRC,HCC,Normal NA NA boxplot RP1-59M18.2 NA chr11 18000542 18022931 - 22390 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-59M18.2 NA 0.906 10-20% NA NA CRC,HCC,Normal,PAAD CHD(down) NA boxplot ENPP7P8 ectonucleotide pyrophosphatase/phosphodiesterase 7 pseudogene 8 chr11 71711740 71781183 + 69444 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ENPP7P8 NA 0.2 40-50% Kidney 1.299448481 Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot SERPINH1P1 serpin peptidase inhibitor, clade H1, pseudogene 1 chr9 34318407 34319655 + 1249 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SERPINH1P1 NA 0.024 30-40% Testis 4.440049143 Breast_cancer,HCC,PAAD NA NA boxplot CTD-2199O4.7 NA chr5 10195187 10197622 - 2436 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2199O4.7 NA 0.035 20-30% NA NA CRC,Normal,PAAD NA NA boxplot APOOP4 apolipoprotein O pseudogene 4 chr4 68304343 68304939 - 597 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=APOOP4 NA 0.012 90-100% Pituitary 4.088260098 Normal NA NA boxplot RP11-432J9.3 NA chr10 70929925 70932057 + 2133 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-432J9.3 NA 0.012 90-100% NA NA Breast_cancer,CRC NA NA boxplot BTF3P7 basic transcription factor 3 pseudogene 7 chr6 6794915 6795402 - 488 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=BTF3P7 NA 0.047 20-30% NA NA CRC,Normal NA NA boxplot GZMAP1 granzyme A pseudogene 1 chr5 55073015 55096553 + 23539 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GZMAP1 NA 0.059 10-20% NA NA CRC,HCC,Normal NA NA boxplot TRAPPC12-AS1 TRAPPC12 antisense RNA 1 chr2 3481242 3482409 - 1168 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TRAPPC12-AS1 NA 0.035 0-10% NA NA Breast_cancer,Normal NA NA boxplot AL672294.1 NA chr1 248859164 248864796 + 5633 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AL672294.1 NA 0.047 70-80% Testis 3.678990383 Normal,PAAD NA NA boxplot AP001468.58 NA chr21 46185079 46188941 + 3863 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AP001468.58 NA 0.047 30-40% Testis 4.66166153 Breast_cancer,HCC,Normal NA NA boxplot LINC01185 long intergenic non-protein coding RNA 1185 chr2 60825132 60881314 - 56183 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01185 NA 0.024 90-100% NA NA Breast_cancer,CRC,Normal NA NA boxplot AC008982.2 NA chr19 38844729 38845499 - 771 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC008982.2 NA 0.259 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot ZFHX4-AS1 ZFHX4 antisense RNA 1 chr8 76491200 76683278 - 192079 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ZFHX4-AS1 NA 0.012 10-20% NA NA Breast_cancer,HCC NA NA boxplot RP1-266L20.2 NA chr6 169725091 169725854 - 764 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-266L20.2 NA 0.153 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot AC025165.8 NA chr12 57612118 57619638 - 7521 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC025165.8 NA 0.247 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-539E17.5 NA chr8 123181638 123182788 - 1151 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-539E17.5 NA 0.012 90-100% NA NA Breast_cancer NA NA boxplot NRADDP neurotrophin receptor associated death domain, pseudogene chr3 47011542 47013146 + 1605 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NRADDP NA 0.059 80-90% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-210M15.1 NA chr15 80433795 80445152 - 11358 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-210M15.1 NA 0.012 80-90% Testis 4.104030968 Breast_cancer,HCC NA NA boxplot RP4-673D20.5 NA chr20 1676662 1676907 - 246 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-673D20.5 NA 0.059 30-40% NA NA Breast_cancer,CRC,Normal NA NA boxplot CYP4F35P cytochrome P450 family 4 subfamily F member 35, pseudogene chr18 14337423 14342524 + 5102 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CYP4F35P NA 0.106 80-90% Testis 1.34858294 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CTD-3220F14.1 NA chr19 37265939 37271518 - 5580 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-3220F14.1 NA 0.024 80-90% Testis 2.394515027 Breast_cancer,HCC,Normal NA NA boxplot CTB-37A13.1 NA chr5 169772966 169779365 - 6400 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTB-37A13.1 NA 0.012 20-30% NA NA Normal NA NA boxplot MRPS18CP6 mitochondrial ribosomal protein S18C pseudogene 6 chr22 44483495 44483717 - 223 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MRPS18CP6 NA 0.012 80-90% NA NA NA NA NA boxplot RP11-131L12.4 NA chr12 118430147 118430699 + 553 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-131L12.4 NA 0.071 50-60% NA NA CRC,Normal,PAAD NA NA boxplot RP11-175B9.2 NA chr1 202438396 202439957 + 1562 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-175B9.2 NA 0.082 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-94C24.13 NA chr17 50475819 50478391 + 2573 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-94C24.13 NA 0.035 70-80% NA NA Breast_cancer,CRC,Normal NA NA boxplot RP11-21L23.3 NA chr11 76782581 76783062 - 482 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-21L23.3 NA 0.047 30-40% NA NA Breast_cancer,CRC,HCC,PAAD NA NA boxplot HOXC-AS1 HOXC cluster antisense RNA 1 chr12 53999022 54000010 - 989 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HOXC-AS1 NA 0.047 50-60% NA NA HCC NA NA boxplot RP11-574K11.29 NA chr10 73703735 73713581 - 9847 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-574K11.29 NA 0.588 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-78C3.1 NA chr5 82919376 82921119 - 1744 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-78C3.1 NA 0.024 80-90% NA NA PAAD NA NA boxplot LINC00856 long intergenic non-protein coding RNA 856 chr10 78179185 78551355 + 372171 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00856 NA 0.388 10-20% Brain 1.575998339 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot KB-1184D12.1 NA chr8 94097764 94104322 - 6559 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KB-1184D12.1 NA 0.012 90-100% NA NA Breast_cancer NA NA boxplot MORF4 mortality factor 4 (pseudogene) chr4 173615936 173616906 - 971 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MORF4 NA 0.129 90-100% NA NA HCC,Normal,PAAD NA NA boxplot DIAPH2-AS1 DIAPH2 antisense RNA 1 chrX 97431286 97642589 - 211304 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DIAPH2-AS1 NA 0.282 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP13-585F24.1 NA chr4 19813749 19814231 + 483 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP13-585F24.1 NA 0.329 90-100% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-111A22.1 NA chr15 40488041 40558019 + 69979 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-111A22.1 NA 0.329 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-390P2.4 NA chr6 138692548 138697288 + 4741 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-390P2.4 NA 0.424 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-519M16.1 NA chr4 129724171 129771481 - 47311 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-519M16.1 NA 0.012 80-90% Testis 4.906892038 Breast_cancer NA NA boxplot RP11-557N21.1 NA chr2 23667208 23685453 - 18246 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-557N21.1 exo_circ_043508 0.047 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC127904.2 NA chr3 196912646 196914579 + 1934 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC127904.2 NA 0.188 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot C6orf47-AS1 C6orf47 antisense RNA 1 chr6 31658329 31660721 + 2393 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=C6orf47-AS1 NA 0.376 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-87H9.5 NA chr9 41061290 41062917 + 1628 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-87H9.5 NA 0.376 10-20% NA NA CRC,HCC,Normal,PAAD NA NA boxplot AC010761.8 NA chr17 28721487 28722877 - 1391 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC010761.8 NA 0.906 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot CTB-33O18.3 NA chr5 173579643 173585068 + 5426 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTB-33O18.3 NA 0.024 10-20% NA NA Breast_cancer,Normal NA NA boxplot RP11-274B21.9 NA chr7 128690451 128691717 + 1267 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-274B21.9 NA 0.035 10-20% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot TDGP1 thymine-DNA glycosylase pseudogene 1 chr12 25803298 25804526 + 1229 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TDGP1 NA 0.847 20-30% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CRC(down),HCC(up) NA boxplot AC006130.4 NA chr19 2874950 2875592 - 643 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC006130.4 NA 0.012 90-100% NA NA Breast_cancer,CRC NA NA boxplot RP11-642A1.1 NA chr8 140591684 140593201 + 1518 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-642A1.1 NA 0.012 10-20% NA NA Breast_cancer,Normal NA NA boxplot RP11-61K9.3 NA chr13 19863858 19865048 + 1191 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-61K9.3 exo_circ_013954,exo_circ_056761 0.435 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RBMS3-AS2 RBMS3 antisense RNA 2 chr3 29526251 29642809 - 116559 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RBMS3-AS2 NA 0.012 20-30% NA NA Breast_cancer,Normal NA NA boxplot KRT8P9 keratin 8 pseudogene 9 chr15 70858714 70860162 + 1449 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KRT8P9 NA 0.012 90-100% Ovary 4.906892038 Breast_cancer NA NA boxplot RP11-345J4.1 NA chr16 29475064 29475355 + 292 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-345J4.1 NA 0.141 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP3-395M20.3 NA chr1 2493437 2494479 - 1043 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-395M20.3 NA 0.024 80-90% NA NA Breast_cancer,CRC,Normal NA NA boxplot AC005616.1 NA chr19 28491864 28632728 - 140865 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC005616.1 NA 0.035 70-80% NA NA Breast_cancer,Normal,PAAD NA NA boxplot CTD-2044J15.1 NA chr5 6686325 6707711 - 21387 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2044J15.1 NA 0.176 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RPSAP15 ribosomal protein SA pseudogene 15 chrX 87703343 87704203 - 861 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPSAP15 NA 1 0-10% NA NA CHD,CRC,HCC,Normal,PAAD CHD(up) NA boxplot FAM27C family with sequence similarity 27 member C chr9 61854162 61855331 + 1170 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FAM27C NA 0.106 60-70% Testis 4.106263941 CRC,HCC,Normal,PAAD NA NA boxplot RP11-20G13.5 NA chr15 99416584 99417204 + 621 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-20G13.5 NA 0.012 90-100% NA NA Breast_cancer,CRC NA NA boxplot DIRC3-AS1 DIRC3 antisense RNA 1 chr2 217282739 217336120 + 53382 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DIRC3-AS1 NA 0.118 10-20% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP13-580F15.2 NA chr17 4481966 4486353 - 4388 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP13-580F15.2 NA 0.812 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),PAAD(down) NA boxplot RP5-1049G16.4 NA chr20 47630266 47631438 - 1173 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-1049G16.4 NA 0.012 50-60% NA NA HCC NA NA boxplot RP11-809H16.3 NA chr15 69022230 69024176 + 1947 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-809H16.3 NA 0.012 60-70% Testis 2.782642559 NA NA NA boxplot RP11-84A14.5 NA chr1 9848318 9850154 + 1837 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-84A14.5 NA 0.141 70-80% NA NA HCC,Normal,PAAD NA NA boxplot RBM8B RNA binding motif protein 8B pseudogene chr14 60397757 60398281 + 525 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RBM8B NA 0.965 10-20% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-386I23.1 NA chr1 92930696 92934098 + 3403 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-386I23.1 NA 0.035 10-20% NA NA Normal NA NA boxplot BRD7P4 bromodomain containing 7 pseudogene 4 chr6 111430260 111431781 + 1522 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=BRD7P4 NA 0.141 80-90% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-378A13.2 NA chr2 218398743 218399219 - 477 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-378A13.2 NA 0.612 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot AC002456.2 NA chr7 90590619 90597353 - 6735 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC002456.2 NA 0.424 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP1-47A17.1 NA chr22 42791814 42794313 - 2500 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-47A17.1 NA 0.059 70-80% NA NA Breast_cancer,CRC,HCC,PAAD NA NA boxplot RP11-343B5.1 NA chr3 142043623 142044198 - 576 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-343B5.1 NA 0.565 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-677M24.1 NA chr12 65830750 65831050 + 301 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-677M24.1 NA 0.012 10-20% NA NA NA NA NA boxplot SATB1-AS1 SATB1 antisense RNA 1 chr3 18445024 18920401 + 475378 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SATB1-AS1 exo_circ_054215,exo_circ_003629,exo_circ_001843 0.953 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot RP11-385F5.4 NA chr1 236540094 236550280 - 10187 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-385F5.4 NA 0.059 80-90% NA NA CRC,HCC,Normal NA NA boxplot LINC00200 long intergenic non-protein coding RNA 200 chr10 1159768 1164672 + 4905 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00200 NA 0.024 40-50% Testis 4.879702817 Breast_cancer,HCC NA NA boxplot RP11-568G20.2 NA chr15 59871511 59873495 - 1985 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-568G20.2 NA 0.012 90-100% NA NA NA NA NA boxplot RP1-249F5.3 NA chr6 159899186 159902510 + 3325 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-249F5.3 NA 0.129 60-70% NA NA CRC,Normal,PAAD NA NA boxplot AC104653.1 NA chr2 113831049 113843356 - 12308 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC104653.1 exo_circ_032687 0.541 20-30% Testis 1.300415644 CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot FLJ40194 uncharacterized FLJ40194 chr17 49248239 49258662 + 10424 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FLJ40194 NA 0.153 20-30% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot AC007392.4 NA chr2 66697125 66703227 - 6103 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC007392.4 NA 0.012 80-90% NA NA HCC NA NA boxplot RP11-895M11.3 NA chr14 91418266 91421176 + 2911 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-895M11.3 NA 0.118 50-60% Testis 4.378959085 CRC,HCC,Normal,PAAD NA NA boxplot CECR7 cat eye syndrome chromosome region, candidate 7 (non-protein coding) chr22 17036570 17060825 + 24256 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CECR7 exo_circ_027007 0.6 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD PAAD(up) NA boxplot RPL7AP60 ribosomal protein L7a pseudogene 60 chr12 112301870 112302663 - 794 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL7AP60 NA 0.094 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC004980.7 NA chr7 76549360 76627982 + 78623 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC004980.7 NA 0.871 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),PAAD(up) NA boxplot MIAT myocardial infarction associated transcript (non-protein coding) chr22 26646428 26676475 + 30048 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MIAT NA 0.506 0-10% Pituitary 2.343628173 Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down),CRC(up),HCC(down) NA boxplot C1orf195 chromosome 1 open reading frame 195 chr1 15164344 15171317 - 6974 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=C1orf195 NA 0.012 90-100% Testis 2.729837653 HCC NA NA boxplot HNRNPA3P11 heterogeneous nuclear ribonucleoprotein A3 pseudogene 11 chr15 57246960 57247893 - 934 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HNRNPA3P11 NA 0.035 0-10% NA NA Breast_cancer,CRC,Normal NA NA boxplot RP11-52B19.1 NA chr8 8095946 8096726 + 781 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-52B19.1 NA 0.012 90-100% NA NA NA NA NA boxplot RP11-9L18.2 NA chr1 166275629 166277597 - 1969 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-9L18.2 NA 0.788 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RPL41P2 ribosomal protein L41 pseudogene 2 chr15 28315651 28316059 + 409 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL41P2 NA 0.8 80-90% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot CTD-2302E22.6 NA chr14 63642143 63642696 + 554 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2302E22.6 NA 0.624 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-723O4.9 NA chr3 128859716 128860526 - 811 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-723O4.9 NA 0.141 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-861A13.3 NA chr3 108036718 108038445 - 1728 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-861A13.3 NA 0.224 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot C1DP5 C1D nuclear receptor corepressor pseudogene 5 chr11 83111060 83111442 - 383 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=C1DP5 NA 0.918 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(down),PAAD(down) NA boxplot RP11-126L15.4 NA chr7 100837314 100852616 - 15303 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-126L15.4 NA 0.188 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot FMO9P flavin containing monooxygenase 9 pseudogene chr1 166603675 166631400 + 27726 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FMO9P NA 0.024 10-20% Bladder 4.172703093 Breast_cancer,HCC,PAAD NA NA boxplot CTD-2376I20.1 NA chr14 100052803 100074878 - 22076 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2376I20.1 NA 0.082 50-60% Testis 4.906892038 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot FGD5P1 FYVE, RhoGEF and PH domain containing 5 pseudogene 1 chr3 13933056 13937477 + 4422 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FGD5P1 NA 0.059 10-20% Testis 1.631520493 Breast_cancer,HCC,Normal,PAAD NA NA boxplot AC020571.3 NA chr2 196260024 196264204 + 4181 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC020571.3 NA 0.788 0-10% Prostate 2.429769423 CRC,HCC,Normal,PAAD CHD(down),PAAD(up) NA boxplot RP11-380B4.3 NA chr13 32782874 32788178 + 5305 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-380B4.3 NA 0.224 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot UTAT33 uncharacterized LOC101927492 chr2 105097052 105102944 - 5893 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=UTAT33 NA 0.341 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot LINC00165 long intergenic non-protein coding RNA 165 chr21 44994362 44995185 - 824 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00165 NA 0.035 30-40% NA NA Breast_cancer,PAAD NA NA boxplot RP11-403A21.1 NA chr18 23957754 23982556 - 24803 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-403A21.1 NA 0.012 70-80% NA NA Breast_cancer NA NA boxplot H2AFZP1 H2A histone family member Z pseudogene 1 chr21 44046347 44047041 - 695 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=H2AFZP1 NA 0.012 10-20% NA NA Breast_cancer,Normal NA NA boxplot TTC39A-AS1 TTC39A antisense RNA 1 chr1 51329654 51335324 + 5671 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TTC39A-AS1 NA 0.047 50-60% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot RP11-199F11.2 NA chr17 7685260 7686371 - 1112 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-199F11.2 NA 0.141 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-230L22.4 NA chr9 123491884 123493156 + 1273 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-230L22.4 NA 0.024 70-80% NA NA Normal NA NA boxplot RP11-274B21.1 NA chr7 128533652 128615970 + 82319 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-274B21.1 exo_circ_033537 0.929 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-14C10.2 NA chr15 101580893 101581556 - 664 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-14C10.2 NA 0.012 80-90% NA NA NA NA NA boxplot RAP2C-AS1 RAP2C antisense RNA 1 chrX 132217147 132432862 + 215716 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RAP2C-AS1 NA 0.718 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down),CRC(down) NA boxplot RP11-196I18.3 NA chr9 107116829 107117557 + 729 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-196I18.3 NA 0.4 70-80% NA NA CRC,HCC,Normal,PAAD NA NA boxplot PTP4A2P1 protein tyrosine phosphatase type IVA, member 2 pseudogene 1 chr17 42533532 42534009 + 478 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PTP4A2P1 NA 0.671 70-80% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot SALL4P1 spalt-like transcription factor 4 pseudogene 1 chr5 57422464 57424391 + 1928 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SALL4P1 NA 0.024 70-80% NA NA Breast_cancer,PAAD NA NA boxplot INE1 inactivation escape 1 (non-protein coding) chrX 47204921 47205865 + 945 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=INE1 NA 0.188 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-113E21.3 NA chr10 85555484 85557436 - 1953 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-113E21.3 NA 0.035 60-70% NA NA Breast_cancer,CRC,PAAD NA NA boxplot SHROOM2P1 shroom family member 2 pseudogene 1 chrY 12537773 12544883 + 7111 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SHROOM2P1 NA 0.047 80-90% Testis 4.906892038 CRC,HCC,Normal NA NA boxplot RPL12P39 ribosomal protein L12 pseudogene 39 chr18 64072158 64072653 + 496 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL12P39 NA 0.012 90-100% Testis 4.906892038 Normal NA NA boxplot FRG1BP FSHD region gene 1 family member B, pseudogene chr20 30377372 30399257 + 21886 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FRG1BP NA 0.918 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-54G14.1 NA chr18 35317396 35317848 + 453 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-54G14.1 NA 0.035 80-90% NA NA HCC,PAAD NA NA boxplot RP11-13P5.1 NA chr6 159107791 159116053 + 8263 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-13P5.1 NA 0.118 30-40% Spleen 2.312314501 Breast_cancer,CRC,HCC,Normal NA NA boxplot CD24P4 CD24 molecule pseudogene 4 chrY 18992467 18992709 - 243 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CD24P4 NA 0.612 20-30% NA NA CHD,CRC,HCC,Normal,PAAD CHD(up) NA boxplot LINCMD1 long intergenic non-protein coding RNA, muscle differentiation 1 chr6 52146814 52151119 - 4306 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINCMD1 NA 0.059 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-44I10.3 NA chr16 48559661 48587403 + 27743 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-44I10.3 NA 0.012 0-10% Testis 1.608992292 HCC,Normal NA NA boxplot RP4-612B15.3 NA chr1 86703502 86704462 - 961 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-612B15.3 NA 0.4 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot SDHDP6 succinate dehydrogenase complex subunit D, integral membrane protein pseudogene 6 chr1 25294164 25294643 - 480 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SDHDP6 NA 0.8 50-60% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-87G24.2 NA chr17 76966285 76969530 - 3246 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-87G24.2 NA 0.024 70-80% NA NA Breast_cancer,PAAD NA NA boxplot AC010525.4 NA chr19 55694118 55694558 - 441 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC010525.4 NA 0.012 10-20% NA NA Breast_cancer,PAAD NA NA boxplot RP4-693M11.3 NA chr14 73698103 73700351 - 2249 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-693M11.3 NA 0.012 20-30% NA NA HCC,Normal NA NA boxplot CTC-471J1.11 NA chr19 52049007 52049754 + 748 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-471J1.11 NA 0.353 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-478H13.4 NA chr10 28806121 28813458 + 7338 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-478H13.4 NA 0.353 30-40% Testis 4.906892038 CRC,HCC,Normal,PAAD NA NA boxplot RP11-496I9.1 NA chr11 557595 560107 + 2513 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-496I9.1 NA 0.082 80-90% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-187O7.3 NA chr14 76495363 76726712 - 231350 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-187O7.3 NA 0.141 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot TCEAL4P1 transcription elongation factor A (SII)-like 4 pseudogene 1 chr13 36741878 36742465 - 588 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TCEAL4P1 NA 0.012 70-80% NA NA Breast_cancer,HCC NA NA boxplot RP1-100J12.1 NA chr21 29024255 29024890 - 636 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-100J12.1 NA 0.059 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-270M14.5 NA chr14 75970924 75971587 + 664 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-270M14.5 NA 0.129 90-100% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC006372.5 NA chr7 157501322 157503577 + 2256 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC006372.5 NA 0.012 90-100% Testis 3.694505575 NA NA NA boxplot LINC00520 long intergenic non-protein coding RNA 520 chr14 55781135 55796688 - 15554 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00520 NA 0.4 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-458J1.1 NA chr17 40648300 40649718 + 1419 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-458J1.1 NA 0.694 20-30% NA NA CRC,HCC,Normal,PAAD CHD(down),PAAD(down) NA boxplot LINC01549 long intergenic non-protein coding RNA 1549 chr21 17438890 17449185 + 10296 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01549 NA 0.047 40-50% NA NA CRC,HCC,Normal NA NA boxplot RP11-697E22.1 NA chr17 37609739 37613841 + 4103 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-697E22.1 NA 0.071 70-80% NA NA HCC,Normal NA NA boxplot LINC00565 long intergenic non-protein coding RNA 565 chr13 113926514 113928844 - 2331 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00565 NA 0.188 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC053503.11 NA chr2 219482073 219516877 - 34805 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC053503.11 NA 0.012 90-100% Pituitary 1.543324409 Breast_cancer,HCC NA NA boxplot MRPL35P2 mitochondrial ribosomal protein L35 pseudogene 2 chr10 63634317 63634827 - 511 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MRPL35P2 exo_circ_045147,exo_circ_039586 0.012 30-40% NA NA Normal NA NA boxplot RP11-171I2.3 NA chr2 178644717 178645179 + 463 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-171I2.3 NA 0.024 90-100% NA NA Normal,PAAD NA NA boxplot RP11-109E12.5 NA chr2 131363364 131364881 + 1518 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-109E12.5 NA 0.753 20-30% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot AC005730.2 NA chr17 20056287 20056630 + 344 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC005730.2 NA 0.459 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-317B7.2 NA chr4 2088718 2090617 - 1900 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-317B7.2 NA 0.035 30-40% NA NA Normal,PAAD NA NA boxplot E2F3-IT1 E2F3 intronic transcript 1 chr6 20437821 20440178 + 2358 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=E2F3-IT1 NA 0.141 30-40% Testis 4.906892038 CRC,HCC,Normal,PAAD NA NA boxplot CTD-2555O16.2 NA chr14 64422935 64448557 - 25623 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2555O16.2 NA 0.388 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot SLC25A24P2 SLC25A24 pseudogene 2 chr1 108383736 108421295 - 37560 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SLC25A24P2 NA 0.059 20-30% Testis 4.906892038 CRC,PAAD NA NA boxplot KIR2DS4 killer cell immunoglobulin-like receptor, two domains, short cytoplasmic tail, 4 chr19 54832676 54848569 + 15894 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KIR2DS4 NA 0.765 0-10% Whole Blood 3.06128693 Breast_cancer,CHD,CRC,HCC,Normal,PAAD CRC(down) NA boxplot RP11-58A17.3 NA chr12 57967058 57968399 + 1342 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-58A17.3 NA 0.024 60-70% Brain 3.315884556 PAAD NA NA boxplot RP11-429J17.7 NA chr8 143758153 143771822 - 13670 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-429J17.7 NA 0.024 80-90% NA NA HCC NA NA boxplot RP11-275I4.1 NA chr15 38524070 38534655 + 10586 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-275I4.1 NA 0.024 60-70% Testis 4.192388279 Breast_cancer,CRC NA NA boxplot RP11-91K8.2 NA chr3 133546071 133546272 - 202 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-91K8.2 NA 0.047 80-90% NA NA CRC,Normal NA NA boxplot RP11-360N9.2 NA chr17 67611277 67613822 + 2546 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-360N9.2 NA 0.106 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-386E5.1 NA chr5 40415137 40431491 + 16355 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-386E5.1 NA 0.012 90-100% NA NA CRC NA NA boxplot RP11-438B23.2 NA chr9 27937617 27944497 - 6881 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-438B23.2 NA 0.024 20-30% NA NA HCC,Normal,PAAD NA NA boxplot CTB-119C2.1 NA chr7 26173533 26174945 - 1413 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTB-119C2.1 NA 0.2 10-20% NA NA CRC,HCC,Normal,PAAD NA NA boxplot AC011242.5 NA chr2 43680465 43681622 - 1158 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC011242.5 NA 0.012 80-90% NA NA PAAD NA NA boxplot RP11-818F20.5 NA chr12 104262314 104280722 - 18409 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-818F20.5 NA 0.024 0-10% Adrenal Gland 4.137903093 PAAD NA NA boxplot LINC01609 long intergenic non-protein coding RNA 1609 chr8 111098961 111236203 - 137243 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01609 NA 0.012 90-100% NA NA HCC NA NA boxplot CTD-2171N6.1 NA chr18 55105904 55124306 - 18403 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2171N6.1 NA 0.047 50-60% NA NA Breast_cancer,Normal,PAAD NA NA boxplot STEAP3-AS1 STEAP3 antisense RNA 1 chr2 119244422 119249071 - 4650 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=STEAP3-AS1 NA 0.188 40-50% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot BOLA2P2 bolA family member 2 pseudogene 2 chr3 47499841 47500407 + 567 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=BOLA2P2 NA 0.024 30-40% NA NA HCC,PAAD NA NA boxplot RP11-248J23.5 NA chr10 95999778 96000243 - 466 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-248J23.5 NA 0.012 50-60% Testis 1.646434557 CRC NA NA boxplot CTD-2621I17.3 NA chr19 56149817 56150490 + 674 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2621I17.3 NA 0.024 20-30% NA NA HCC,Normal NA NA boxplot RP11-255A11.2 NA chr9 33512959 33514773 - 1815 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-255A11.2 NA 0.012 30-40% Testis 4.817211785 PAAD NA NA boxplot SLC9A3P2 solute carrier family 9, subfamily A (NHE3, cation proton antiporter 3), member 3 pseudogene 2 chr22 20652730 20654750 + 2021 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SLC9A3P2 NA 0.035 90-100% Testis 4.299386125 Breast_cancer,CRC,HCC,Normal NA NA boxplot RP11-138H8.8 NA chr15 70758269 70758856 - 588 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-138H8.8 NA 0.012 10-20% NA NA NA NA NA boxplot RP11-513M16.8 NA chr9 19375451 19375996 + 546 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-513M16.8 NA 0.259 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CTD-2072I24.1 NA chr5 7924292 7925398 + 1107 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2072I24.1 NA 0.012 70-80% Testis 4.906892038 PAAD NA NA boxplot RP11-479O9.4 NA chr7 65647010 65770810 - 123801 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-479O9.4 NA 0.659 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),HCC(down),PAAD(down) NA boxplot RP4-545K15.5 NA chrX 101627868 101628523 + 656 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-545K15.5 NA 0.435 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot COX10-AS1 COX10 antisense RNA 1 chr17 13756478 14069495 - 313018 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=COX10-AS1 NA 0.894 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down),HCC(down) NA boxplot CTD-2083E4.6 NA chr5 269858 271516 - 1659 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2083E4.6 NA 0.071 30-40% Testis 2.247546502 Breast_cancer,CRC,HCC,PAAD NA NA boxplot AP001610.5 NA chr21 41441056 41445708 - 4653 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AP001610.5 NA 0.329 50-60% Spleen 1.573738859 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot LINC01060 long intergenic non-protein coding RNA 1060 chr4 188400736 188681051 + 280316 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01060 NA 0.118 10-20% NA NA HCC,Normal,PAAD NA NA boxplot LINC00937 long intergenic non-protein coding RNA 937 chr12 8295986 8396803 - 100818 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00937 NA 0.494 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CRC(up) NA boxplot IGBP1-AS2 IGBP1 antisense RNA 2 chrX 70148582 70149654 - 1073 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=IGBP1-AS2 NA 0.047 60-70% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot SLC9B1P3 solute carrier family 9, subfamily B (NHA1, cation proton antiporter 1), member 1 pseudogene 3 chr10 38640971 38689068 - 48098 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SLC9B1P3 NA 0.012 50-60% Testis 4.906892038 Normal NA NA boxplot HMGB3P9 high mobility group box 3 pseudogene 9 chr1 92647048 92647630 - 583 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HMGB3P9 NA 0.141 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot LINC01267 long intergenic non-protein coding RNA 1267 chr3 14348451 14352568 - 4118 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01267 NA 0.012 20-30% NA NA Breast_cancer,Normal NA NA boxplot AC012363.4 NA chr2 120174885 120216544 - 41660 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC012363.4 NA 0.247 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot SERBP1P3 SERPINE1 mRNA binding protein 1 pseudogene 3 chr3 53064283 53065091 - 809 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SERBP1P3 NA 0.024 80-90% NA NA Breast_cancer,CRC NA NA boxplot RASA2-IT1 RASA2 intronic transcript 1 chr3 141525133 141526121 + 989 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RASA2-IT1 NA 0.035 70-80% NA NA CRC,Normal NA NA boxplot RP11-349F21.2 NA chr8 17510613 17511300 + 688 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-349F21.2 NA 0.012 90-100% NA NA NA NA NA boxplot LINC00887 long intergenic non-protein coding RNA 887 chr3 194296465 194312803 - 16339 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00887 NA 0.047 40-50% Adrenal Gland 2.978775815 Breast_cancer,Normal,PAAD NA NA boxplot RP11-656D10.6 NA chr1 40515754 40517174 - 1421 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-656D10.6 NA 0.082 50-60% NA NA HCC,Normal,PAAD NA NA boxplot C5orf64 chromosome 5 open reading frame 64 chr5 61637708 61751763 + 114056 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=C5orf64 exo_circ_054929 0.165 20-30% Brain 1.676295694 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-51O6.1 NA chr16 61055399 61055964 - 566 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-51O6.1 NA 0.929 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),PAAD(down) NA boxplot AP000705.6 NA chr21 22153950 22154299 - 350 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AP000705.6 NA 0.012 80-90% Testis 4.906892038 NA NA NA boxplot AC002366.3 NA chrX 11334233 11335901 - 1669 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC002366.3 NA 0.047 70-80% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC018738.2 NA chr2 231256097 231256306 + 210 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC018738.2 NA 0.929 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(down) NA boxplot RP11-219B4.5 NA chr8 85222446 85245717 - 23272 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-219B4.5 NA 0.106 40-50% Testis 3.830339363 CRC,HCC,Normal,PAAD NA NA boxplot AC090018.1 NA chr3 195561215 195561580 - 366 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC090018.1 NA 0.012 80-90% Testis 2.909644865 Breast_cancer,HCC NA NA boxplot RP11-134G8.7 NA chr1 201507241 201534784 + 27544 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-134G8.7 NA 0.459 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-399K21.12 NA chr10 75450081 75451725 + 1645 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-399K21.12 exo_circ_021025,exo_circ_045168 0.176 30-40% NA NA CRC,Normal,PAAD NA NA boxplot AC078941.1 NA chr2 67123357 67215319 - 91963 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC078941.1 NA 0.082 60-70% Pancreas 2.953543714 Breast_cancer,CRC,HCC,Normal NA NA boxplot RP11-205A8.4 NA chr10 72467749 72473304 - 5556 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-205A8.4 NA 0.012 90-100% NA NA Breast_cancer,CRC NA NA boxplot CTC-756D1.1 NA chr8 23483016 23483534 - 519 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-756D1.1 NA 0.094 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RPS2P41 ribosomal protein S2 pseudogene 41 chr12 111879338 111880249 - 912 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPS2P41 NA 0.024 80-90% NA NA Breast_cancer,CRC NA NA boxplot AP001059.6 NA chr21 44241847 44242081 + 235 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AP001059.6 NA 0.024 90-100% NA NA CRC,PAAD NA NA boxplot HSD17B7P2 hydroxysteroid (17-beta) dehydrogenase 7 pseudogene 2 chr10 38356380 38378505 + 22126 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HSD17B7P2 NA 0.506 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up) NA boxplot LA16c-390H2.4 NA chr16 3542739 3545785 + 3047 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LA16c-390H2.4 exo_circ_028763 0.094 70-80% NA NA Breast_cancer,CRC,Normal,PAAD NA NA boxplot MIR3180-4 microRNA 3180-4 chr16 15154903 15157020 + 2118 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MIR3180-4 NA 0.012 20-30% NA NA Normal NA NA boxplot RP11-317B17.4 NA chr9 88391362 88391832 - 471 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-317B17.4 NA 0.012 90-100% NA NA Breast_cancer,CRC NA NA boxplot RP11-429P3.3 NA chr16 50046429 50066224 - 19796 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-429P3.3 NA 0.012 90-100% Testis 4.906892038 CRC,PAAD NA NA boxplot RP11-214K3.5 NA chr12 124005871 124006225 - 355 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-214K3.5 NA 0.012 30-40% NA NA Normal NA NA boxplot RP11-64P14.7 NA chr9 122609915 122639685 + 29771 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-64P14.7 NA 0.012 90-100% NA NA Normal NA NA boxplot RP11-180P8.4 NA chr17 62978494 62978841 - 348 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-180P8.4 NA 0.012 90-100% NA NA HCC NA NA boxplot PRKX-AS1 PRKX antisense RNA 1 chrX 3659487 3668192 + 8706 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PRKX-AS1 NA 0.035 50-60% Cervix 4.906892038 Breast_cancer,CRC,PAAD NA NA boxplot BACH1-IT2 BACH1 intronic transcript 2 chr21 29370497 29373709 + 3213 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=BACH1-IT2 exo_circ_017418 0.4 10-20% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-375N15.2 NA chr8 9555144 9556520 - 1377 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-375N15.2 NA 0.141 60-70% Testis 1.297746657 CRC,HCC,Normal,PAAD NA NA boxplot SNHG8 small nucleolar RNA host gene 8 chr4 118278709 118279823 + 1115 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SNHG8 NA 0.976 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down),CRC(down) NA boxplot CTB-89H12.4 NA chr5 149494314 149504670 - 10357 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTB-89H12.4 NA 0.929 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot TRIM51EP tripartite motif-containing 51E, pseudogene chr11 89981441 89989559 - 8119 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TRIM51EP NA 0.035 40-50% Skin 4.906892038 Breast_cancer,CRC,HCC NA NA boxplot RP11-269F19.2 NA chr1 44759037 44775810 - 16774 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-269F19.2 NA 0.635 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),PAAD(up) NA boxplot RP11-92K15.1 NA chr8 80122852 80127670 + 4819 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-92K15.1 NA 0.012 70-80% NA NA Breast_cancer,Normal NA NA boxplot ZNF529-AS1 ZNF529 antisense RNA 1 chr19 36573070 36594708 + 21639 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ZNF529-AS1 NA 0.859 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down),CRC(down) NA boxplot RP11-391H12.8 NA chr13 113339450 113339958 - 509 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-391H12.8 NA 0.012 60-70% NA NA CRC NA NA boxplot RP13-16H11.5 NA chr10 26717635 26718778 + 1144 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP13-16H11.5 NA 0.012 70-80% Cervix 4.906892038 NA NA NA boxplot RP11-18C24.8 NA chr12 120500735 120501090 - 356 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-18C24.8 NA 0.059 60-70% NA NA CRC,HCC,Normal NA NA boxplot RP11-707P17.2 NA chr15 51457286 51460582 + 3297 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-707P17.2 NA 0.047 60-70% NA NA CRC,HCC,Normal NA NA boxplot MTCO1P1 MT-CO1 pseudogene 1 chr21 8845566 8846646 + 1081 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MTCO1P1 NA 0.024 50-60% NA NA PAAD NA NA boxplot RPL7P9 ribosomal protein L7 pseudogene 9 chr1 96678874 96679620 - 747 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL7P9 NA 1 0-10% NA NA CHD,CRC,HCC,Normal,PAAD CRC(down) NA boxplot CMB9-22P13.2 NA chr11 65487241 65488136 - 896 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CMB9-22P13.2 NA 0.012 80-90% NA NA Breast_cancer NA NA boxplot TMEM14EP transmembrane protein 14E, pseudogene chr3 152340527 152340904 - 378 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TMEM14EP NA 0.024 70-80% NA NA CRC,Normal NA NA boxplot MEIS1-AS3 MEIS1 antisense RNA 3 chr2 66426735 66433470 - 6736 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MEIS1-AS3 NA 0.188 60-70% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP3-363L9.1 NA chrX 132907279 132907575 - 297 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-363L9.1 NA 0.024 40-50% NA NA PAAD NA NA boxplot RP11-7I15.3 NA chr11 78015715 78016495 + 781 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-7I15.3 NA 0.024 10-20% NA NA HCC,PAAD NA NA boxplot RP11-313D6.3 NA chr10 110869743 110871594 + 1852 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-313D6.3 NA 0.106 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-407N8.4 NA chr12 50949117 50949384 - 268 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-407N8.4 NA 0.012 70-80% NA NA Breast_cancer NA NA boxplot RP5-998N21.10 NA chr1 143904301 143905964 - 1664 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-998N21.10 NA 0.529 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-669E14.6 NA chr17 46035313 46035770 + 458 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-669E14.6 NA 0.012 90-100% NA NA Normal NA NA boxplot LL22NC03-75H12.2 uncharacterized LOC101927722 chr22 47461299 47487111 - 25813 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LL22NC03-75H12.2 NA 0.071 10-20% Salivary Gland 1.902504764 Breast_cancer,Normal,PAAD NA NA boxplot SPAG5-AS1 SPAG5 antisense RNA 1 chr17 28598790 28617377 + 18588 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SPAG5-AS1 NA 0.718 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-61L19.2 NA chr18 9473421 9474006 - 586 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-61L19.2 NA 0.047 70-80% NA NA CRC,HCC,Normal NA NA boxplot RP11-493L12.3 NA chr12 47237734 47279021 - 41288 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-493L12.3 NA 0.024 70-80% Spleen 3.961352949 CRC,HCC NA NA boxplot HSPD1P6 heat shock protein family D (Hsp60) member 1 pseudogene 6 chr3 36767117 36784167 - 17051 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HSPD1P6 NA 0.082 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot ANKRD18DP ankyrin repeat domain 18D, pseudogene chr3 198053522 198080720 - 27199 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ANKRD18DP exo_circ_047302 0.624 10-20% Testis 3.934741692 Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot AC006026.9 NA chr7 23562459 23564261 - 1803 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC006026.9 NA 0.035 80-90% NA NA HCC,Normal,PAAD NA NA boxplot RANBP20P RAN binding protein 20 pseudogene chr14 20720742 20723127 - 2386 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RANBP20P NA 0.071 80-90% Testis 4.471489169 Breast_cancer,CHD,HCC,Normal NA NA boxplot YWHAQP7 YWHAQ pseudogene 7 chr12 76619386 76620043 + 658 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=YWHAQP7 NA 0.012 10-20% Testis 4.906892038 HCC NA NA boxplot VN1R82P vomeronasal 1 receptor 82 pseudogene chr19 21188598 21188953 + 356 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=VN1R82P NA 0.118 70-80% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot CD81-AS1 CD81 antisense RNA 1 chr11 2328749 2377992 - 49244 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CD81-AS1 NA 0.294 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC005786.7 NA chr19 3544199 3557569 + 13371 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC005786.7 NA 0.224 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot ITPR1-AS1 ITPR1 antisense RNA 1 (head to head) chr3 4490891 4493163 - 2273 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ITPR1-AS1 NA 0.165 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot UBQLN4P1 ubiquilin 4 pseudogene 1 chr3 148985868 148987668 - 1801 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=UBQLN4P1 NA 0.953 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CRC(down),PAAD(down) NA boxplot RP11-157D23.2 NA chrX 39401252 39434824 - 33573 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-157D23.2 NA 0.071 60-70% NA NA CRC,HCC,Normal NA NA boxplot AC000123.2 NA chr7 127359785 127364759 - 4975 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC000123.2 exo_circ_044549 0.812 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),HCC(down) NA boxplot KLRA1P NA chr12 10588063 10599669 - 11607 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KLRA1P exo_circ_034059 0.729 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(up),PAAD(up) NA boxplot RP11-388P9.3 NA chr10 60139912 60140877 + 966 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-388P9.3 NA 0.024 50-60% NA NA PAAD NA NA boxplot RP11-453N18.1 NA chr8 67133554 67135911 - 2358 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-453N18.1 NA 0.012 80-90% NA NA CRC NA NA boxplot RP11-121E16.1 NA chr12 91362196 91368606 + 6411 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-121E16.1 NA 0.012 10-20% NA NA Breast_cancer,CRC NA NA boxplot AC016999.2 NA chr2 238427077 238427729 - 653 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC016999.2 NA 0.047 60-70% NA NA CRC,HCC,Normal NA NA boxplot AC005339.2 NA chr19 4654964 4655524 - 561 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC005339.2 NA 0.306 50-60% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot CTD-2336H13.2 NA chr16 76736342 76928169 + 191828 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2336H13.2 NA 0.024 80-90% Testis 4.906892038 CRC,Normal NA NA boxplot Z99756.1 NA chr22 43275955 43283830 + 7876 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=Z99756.1 NA 0.024 70-80% Spleen 3.734591827 Breast_cancer,HCC,Normal NA NA boxplot RP11-797H7.1 NA chr7 64835280 64836882 - 1603 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-797H7.1 NA 0.012 90-100% NA NA Breast_cancer,Normal NA NA boxplot RPL35AP26 ribosomal protein L35a pseudogene 26 chr11 126278257 126278577 - 321 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL35AP26 NA 0.012 90-100% NA NA CRC NA NA boxplot LINC01114 long intergenic non-protein coding RNA 1114 chr2 104746638 104757719 - 11082 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01114 NA 0.012 20-30% NA NA Breast_cancer,PAAD NA NA boxplot AC007773.2 NA chr19 32390050 32405560 - 15511 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC007773.2 NA 0.2 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-654A16.1 NA chr15 98880659 98893535 - 12877 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-654A16.1 NA 0.012 50-60% NA NA NA NA NA boxplot RP11-1334A24.5 NA chr5 177476631 177479656 - 3026 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1334A24.5 NA 0.129 10-20% NA NA Breast_cancer,CRC,Normal,PAAD NA NA boxplot GRK6P1 G protein-coupled receptor kinase 6 pseudogene 1 chr13 21319156 21320866 + 1711 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GRK6P1 NA 0.188 80-90% Testis 3.595647543 Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-280G9.1 NA chr8 61759094 61765969 - 6876 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-280G9.1 NA 0.035 0-10% Testis 4.61068641 Breast_cancer,PAAD NA NA boxplot LINC00847 long intergenic non-protein coding RNA 847 chr5 180830957 180835726 + 4770 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00847 NA 1 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-503E24.2 NA chr8 42537529 42538304 - 776 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-503E24.2 NA 0.153 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot AP001462.6 NA chr11 64778954 64779405 + 452 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AP001462.6 NA 0.094 60-70% NA NA CRC,HCC,Normal NA NA boxplot RP11-243M5.3 NA chr12 130980667 130981367 - 701 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-243M5.3 NA 0.024 70-80% NA NA HCC,Normal NA NA boxplot AF064858.11 NA chr21 39006648 39011329 - 4682 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AF064858.11 NA 0.071 50-60% NA NA Breast_cancer,HCC,Normal NA NA boxplot FRG1GP NA chr22 12602466 12626642 + 24177 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FRG1GP NA 0.059 80-90% NA NA Breast_cancer,HCC,Normal NA NA boxplot RP11-1000B6.3 NA chr15 32536047 32587613 + 51567 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1000B6.3 NA 0.835 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CRC(up),HCC(up),PAAD(up) NA boxplot ZNF92P3 zinc finger protein 92 pseudogene 3 chr19 23935220 23936173 + 954 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ZNF92P3 NA 0.024 70-80% NA NA CRC NA NA boxplot POLRMTP1 polymerase (RNA) mitochondrial (DNA directed) pseudogene 1 chr17 62136972 62140639 - 3668 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=POLRMTP1 NA 0.8 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CRC(down),HCC(down),PAAD(down) NA boxplot RP11-727F15.13 NA chr11 62807682 62808063 - 382 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-727F15.13 NA 0.024 70-80% NA NA PAAD NA NA boxplot CTD-2037L6.2 NA chr5 58108082 58122341 - 14260 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2037L6.2 NA 0.012 50-60% Testis 4.756014757 CRC NA NA boxplot RPL21P119 ribosomal protein L21 pseudogene 119 chr16 9156402 9156881 - 480 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL21P119 NA 0.976 0-10% NA NA CHD,CRC,HCC,Normal,PAAD CHD(up),CRC(up),HCC(up),PAAD(up) NA boxplot LINC01142 long intergenic non-protein coding RNA 1142 chr1 170271603 170284208 - 12606 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01142 NA 0.012 30-40% NA NA HCC NA NA boxplot LINC00476 long intergenic non-protein coding RNA 476 chr9 95759231 95875977 - 116747 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00476 NA 0.859 0-10% NA NA CHD,CRC,HCC,Normal,PAAD CHD(up) NA boxplot AF129075.5 NA chr21 29058073 29060095 - 2023 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AF129075.5 NA 0.106 40-50% NA NA CRC,Normal,PAAD NA NA boxplot RP11-501J20.5 NA chr10 117239600 117241923 - 2324 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-501J20.5 NA 0.906 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP1-111B22.3 NA chr6 108030249 108030718 - 470 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-111B22.3 NA 0.071 80-90% NA NA CRC,Normal,PAAD NA NA boxplot RP11-122G18.11 NA chr1 161433444 161440996 - 7553 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-122G18.11 NA 0.024 80-90% NA NA Normal,PAAD NA NA boxplot AC010976.2 NA chr2 127455394 127514623 + 59230 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC010976.2 NA 0.153 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC008753.4 NA chr19 53788782 53789168 + 387 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC008753.4 NA 0.012 70-80% Whole Blood 3.643227732 Normal NA NA boxplot RPS20P2 ribosomal protein S20 pseudogene 2 chr16 1329078 1329777 + 700 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPS20P2 NA 0.094 90-100% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RPL7L1P11 ribosomal protein L7 like 1 pseudogene 11 chrX 148464708 148465428 + 721 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL7L1P11 NA 0.012 90-100% NA NA Normal NA NA boxplot TMED10P1 transmembrane emp24-like trafficking protein 10 (yeast) pseudogene 1 chr8 144994886 144995540 + 655 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TMED10P1 NA 0.047 50-60% NA NA HCC,Normal NA NA boxplot RP11-644N4.1 NA chr7 135704537 135704841 + 305 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-644N4.1 NA 0.012 60-70% NA NA NA NA NA boxplot RP5-908M14.9 NA chr20 62386303 62386970 - 668 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-908M14.9 NA 0.271 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot DRAIC downregulated RNA in cancer, inhibitor of cell invasion and migration chr15 69463026 69571440 + 108415 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DRAIC NA 0.118 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-678G14.4 NA chr19 21587432 21594628 - 7197 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-678G14.4 NA 0.176 70-80% Testis 3.847083596 Breast_cancer,CRC,HCC,Normal NA NA boxplot RP11-863P13.3 NA chr16 88177298 88178941 - 1644 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-863P13.3 NA 0.082 80-90% NA NA Breast_cancer,HCC,Normal NA NA boxplot LINC00337 long intergenic non-protein coding RNA 337 chr1 6236240 6239444 + 3205 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00337 NA 0.082 50-60% Testis 2.445369934 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-464D20.2 NA chr17 62516321 62516767 - 447 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-464D20.2 NA 0.494 70-80% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-798M19.6 NA chr4 173363780 173370446 - 6667 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-798M19.6 NA 0.682 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-369E15.3 NA chr8 20952645 20973877 - 21233 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-369E15.3 NA 0.247 30-40% Testis 4.3940313 CRC,HCC,Normal,PAAD NA NA boxplot RP11-182J1.5 NA chr15 84611689 84614969 - 3281 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-182J1.5 NA 0.035 50-60% NA NA CRC,Normal NA NA boxplot RP11-864J10.2 NA chr12 107719599 107720133 + 535 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-864J10.2 NA 0.047 60-70% NA NA CRC,PAAD NA NA boxplot RP11-2F9.4 NA chr15 22145939 22148226 - 2288 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-2F9.4 NA 0.012 60-70% Testis 4.662565069 CRC NA NA boxplot AC005307.5 NA chr19 28435388 28727680 - 292293 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC005307.5 NA 0.765 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-477J21.6 NA chr9 121279863 121282730 - 2868 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-477J21.6 NA 0.188 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CTD-2619J13.8 NA chr19 58346854 58362751 - 15898 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2619J13.8 NA 0.882 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),HCC(up) NA boxplot LA16c-313F4.1 NA chr16 1576716 1578371 - 1656 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LA16c-313F4.1 NA 0.082 80-90% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot BMS1P4 BMS1, ribosome biogenesis factor pseudogene 4 chr10 73715843 73730469 - 14627 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=BMS1P4 exo_circ_045163 0.906 10-20% NA NA CHD,CRC,HCC,Normal,PAAD CHD(up) NA boxplot CTD-2545M3.2 NA chr19 50480119 50483351 - 3233 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2545M3.2 NA 0.682 10-20% NA NA CRC,HCC,Normal,PAAD CHD(down),PAAD(up) NA boxplot RP11-416N4.1 NA chr20 10180235 10185775 + 5541 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-416N4.1 NA 0.024 40-50% NA NA Normal,PAAD NA NA boxplot SNX18P9 sorting nexin 18 pseudogene 9 chr9 64439346 64440180 + 835 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SNX18P9 NA 0.082 30-40% Testis 2.165928985 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-876N24.7 NA chr16 10934258 10934887 - 630 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-876N24.7 NA 0.235 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-90K6.1 NA chr3 112302478 112332791 + 30314 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-90K6.1 NA 0.047 10-20% Testis 2.212984429 Breast_cancer,HCC,Normal NA NA boxplot AC097533.1 NA chr4 122077840 122078318 - 479 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC097533.1 NA 0.165 60-70% NA NA HCC,Normal,PAAD NA NA boxplot RP11-29H23.4 NA chr1 155609776 155610380 - 605 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-29H23.4 NA 0.035 90-100% Testis 4.334327791 CRC,HCC NA NA boxplot RP11-511B23.1 NA chr12 92999218 93019820 + 20603 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-511B23.1 NA 0.424 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot NPM1P9 nucleophosmin 1 (nucleolar phosphoprotein B23, numatrin) pseudogene 9 chrX 14834476 14835319 - 844 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NPM1P9 NA 0.118 10-20% NA NA CRC,HCC,PAAD NA NA boxplot RP11-184E9.1 NA chr5 25190682 25306172 + 115491 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-184E9.1 NA 0.012 40-50% Testis 4.906892038 Breast_cancer,Normal,PAAD NA NA boxplot RP11-958N24.1 NA chr16 14911551 14935708 + 24158 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-958N24.1 NA 0.929 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(up),HCC(up),PAAD(up) NA boxplot RP11-354P11.4 NA chr17 30204318 30206468 + 2151 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-354P11.4 NA 0.024 10-20% Lung 3.390720399 PAAD NA NA boxplot RP11-41O4.1 NA chr18 70335439 70352459 + 17021 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-41O4.1 exo_circ_057807,exo_circ_046302,exo_circ_046301 0.141 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot ZNF415P1 zinc finger protein 415 pseudogene 1 chr18 9785108 9787805 + 2698 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ZNF415P1 NA 0.141 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot LINC00598 long intergenic non-protein coding RNA 598 chr13 40079106 40535807 - 456702 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00598 NA 0.859 0-10% Testis 2.485883239 Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP4-635A23.4 NA chr1 185280844 185281816 + 973 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-635A23.4 NA 0.118 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-454L9.2 NA chr14 55394940 55395233 - 294 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-454L9.2 NA 0.153 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-2J18.1 NA chr6 156976294 156977072 + 779 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-2J18.1 exo_circ_004126,exo_circ_002662,exo_circ_055156 0.141 10-20% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CTD-2260A17.1 NA chr5 96784777 96785999 + 1223 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2260A17.1 NA 0.282 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-1G11.2 NA chr8 26547669 26548463 + 795 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1G11.2 NA 0.012 70-80% NA NA NA NA NA boxplot RP11-167N4.2 NA chr11 73963657 73970287 - 6631 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-167N4.2 NA 0.188 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot TPM3P8 tropomyosin 3 pseudogene 8 chr2 230573167 230573809 - 643 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TPM3P8 NA 0.282 10-20% Spleen 4.043867667 CHD,CRC,HCC,Normal,PAAD CHD(up) NA boxplot FOXD2-AS1 FOXD2 antisense RNA 1 (head to head) chr1 47432133 47434641 - 2509 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FOXD2-AS1 NA 0.729 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CRC(up),PAAD(up) NA boxplot RP11-856M7.6 NA chr18 10612304 10626353 - 14050 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-856M7.6 NA 0.035 60-70% Testis 3.363320463 CRC,HCC,Normal,PAAD NA NA boxplot RP11-313P13.4 NA chr7 73093657 73105389 + 11733 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-313P13.4 NA 0.682 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-310A13.2 NA chr4 138481255 138482096 - 842 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-310A13.2 NA 0.012 70-80% NA NA CRC NA NA boxplot CTD-3113P16.11 NA chr19 248551 251571 - 3021 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-3113P16.11 NA 0.553 20-30% NA NA CRC,HCC,Normal,PAAD PAAD(up) NA boxplot RP4-796I8.1 NA chr20 12243895 12244296 - 402 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-796I8.1 NA 0.012 0-10% Testis 4.209465651 Normal NA NA boxplot RP11-159D12.8 NA chr17 58095672 58101479 + 5808 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-159D12.8 NA 0.894 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP3-380E11.2 NA chr6 14004920 14006901 + 1982 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-380E11.2 NA 0.012 70-80% Testis 4.906892038 NA NA NA boxplot OR7E25P olfactory receptor family 7 subfamily E member 25 pseudogene chr19 9204308 9205217 + 910 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=OR7E25P NA 0.012 70-80% Testis 4.906892038 HCC NA NA boxplot CTD-2313N18.8 NA chr11 71856277 71863658 + 7382 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2313N18.8 NA 0.012 30-40% Cervix 4.906892038 Normal NA NA boxplot RP11-203M5.7 NA chr14 20451305 20451918 + 614 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-203M5.7 NA 0.012 50-60% NA NA Normal NA NA boxplot RP11-348J12.5 NA chr10 93071972 93073466 + 1495 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-348J12.5 NA 0.012 70-80% NA NA Breast_cancer NA NA boxplot AC017104.2 NA chr2 231452195 231453153 + 959 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC017104.2 NA 0.024 90-100% Testis 4.745820901 Breast_cancer,CRC,PAAD NA NA boxplot CTD-3025N20.3 NA chr8 65591850 65592472 - 623 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-3025N20.3 NA 0.059 60-70% NA NA CRC,HCC,Normal NA NA boxplot LINC00941 long intergenic non-protein coding RNA 941 chr12 30795681 30802711 + 7031 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00941 NA 0.165 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-864N7.2 NA chr11 74745716 74746114 - 399 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-864N7.2 NA 0.929 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(down) NA boxplot RP11-445F12.1 NA chr17 36861674 36936661 - 74988 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-445F12.1 NA 0.024 40-50% NA NA Breast_cancer,PAAD NA NA boxplot RP11-120K19.4 NA chr18 62525919 62526325 - 407 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-120K19.4 NA 0.153 70-80% NA NA CRC,HCC,Normal,PAAD NA NA boxplot OR7E13P olfactory receptor family 7 subfamily E member 13 pseudogene chr11 86832540 86833449 - 910 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=OR7E13P NA 0.024 20-30% NA NA Breast_cancer,HCC,Normal NA NA boxplot RP4-724E16.2 NA chr20 53552770 53575863 + 23094 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-724E16.2 NA 0.047 50-60% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot RP11-756H20.1 NA chr5 125493261 125602227 + 108967 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-756H20.1 NA 0.012 90-100% NA NA PAAD NA NA boxplot RP11-488L18.10 NA chr1 247187281 247188526 - 1246 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-488L18.10 NA 0.612 10-20% NA NA CRC,HCC,Normal,PAAD CRC(up) NA boxplot RP11-164P12.5 NA chr4 151669786 151670503 + 718 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-164P12.5 NA 0.129 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RRM2P2 ribonucleotide reductase M2 polypeptide pseudogene 2 chr1 161378707 161379358 - 652 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RRM2P2 NA 0.012 30-40% Fallopian Tube 3.176134459 Breast_cancer,PAAD NA NA boxplot RP11-542G1.2 NA chr4 75341279 75359024 - 17746 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-542G1.2 NA 0.024 80-90% Pituitary 4.906892038 HCC,Normal NA NA boxplot RP11-679C8.2 NA chr4 120066958 120416766 + 349809 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-679C8.2 NA 0.118 60-70% NA NA CRC,HCC,Normal NA NA boxplot CTC-458G6.4 NA chr5 92826255 92844004 + 17750 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-458G6.4 NA 0.012 20-30% Pancreas 4.906892038 Breast_cancer,HCC NA NA boxplot CICP18 capicua transcriptional repressor pseudogene 18 chr6 142272 145083 - 2812 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CICP18 NA 0.024 90-100% NA NA Breast_cancer,CRC,HCC NA NA boxplot ST6GAL2-IT1 ST6GAL2 intronic transcript 1 chr2 106822923 106825031 - 2109 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ST6GAL2-IT1 exo_circ_048441 0.012 90-100% NA NA Normal NA NA boxplot RP11-344P13.4 NA chr1 121494379 121510383 - 16005 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-344P13.4 NA 0.059 80-90% Liver 4.020563575 Breast_cancer,HCC,Normal,PAAD NA NA boxplot CTD-2516K3.3 NA chr5 57317989 57320020 - 2032 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2516K3.3 NA 0.012 90-100% Testis 4.204607697 Breast_cancer,Normal NA NA boxplot RP11-1149O23.3 NA chr8 23224471 23230926 + 6456 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1149O23.3 NA 0.753 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot SETP10 SET pseudogene 10 chr1 179183734 179184547 + 814 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SETP10 NA 0.012 60-70% Brain 4.906892038 Breast_cancer,HCC NA NA boxplot RP11-662J14.2 NA chr14 40387558 40389140 + 1583 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-662J14.2 NA 0.235 20-30% Testis 3.109658062 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP5-1096D14.3 NA chr12 1917951 1922867 + 4917 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-1096D14.3 NA 0.153 50-60% NA NA CRC,Normal,PAAD NA NA boxplot RP11-584P21.4 NA chr4 67446267 67446574 + 308 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-584P21.4 NA 0.424 70-80% NA NA CRC,HCC,Normal,PAAD NA NA boxplot XXbac-BPG252P9.10 NA chr6 30742929 30743592 + 664 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=XXbac-BPG252P9.10 NA 0.576 10-20% NA NA CRC,HCC,Normal,PAAD NA NA boxplot AC005387.3 NA chr19 18531613 18532632 + 1020 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC005387.3 NA 0.024 70-80% NA NA Breast_cancer,HCC,Normal NA NA boxplot RP5-827C21.4 NA chr1 234372807 234373593 - 787 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-827C21.4 NA 0.282 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC006116.24 NA chr19 56376704 56377284 - 581 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC006116.24 NA 0.271 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot NNT-AS1 NNT antisense RNA 1 chr5 43571594 43603230 - 31637 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NNT-AS1 NA 0.965 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP13-395E19.2 NA chr15 32313126 32315654 - 2529 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP13-395E19.2 NA 0.024 70-80% NA NA Breast_cancer,PAAD NA NA boxplot AJ006998.2 NA chr21 15370500 15627342 - 256843 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AJ006998.2 exo_circ_011521,exo_circ_040690 0.318 10-20% Muscle 1.513633016 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-305F18.1 NA chrX 33726508 33942280 + 215773 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-305F18.1 NA 0.035 20-30% NA NA Breast_cancer,HCC,PAAD NA NA boxplot AC005795.1 NA chr19 41506152 41506898 + 747 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC005795.1 NA 0.929 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot AL162759.1 NA chr14 53768942 53850882 - 81941 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AL162759.1 NA 0.071 10-20% NA NA HCC,Normal,PAAD NA NA boxplot CELSR3-AS1 CELSR3 antisense RNA 1 (head to head) chr3 48663776 48669174 + 5399 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CELSR3-AS1 NA 0.024 80-90% NA NA CHD,HCC NA NA boxplot PAPPA-AS1 PAPPA antisense RNA 1 chr9 116398157 116400606 - 2450 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PAPPA-AS1 NA 0.059 80-90% NA NA CRC,Normal,PAAD NA NA boxplot AC079354.3 NA chr2 202113626 202117058 - 3433 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC079354.3 NA 0.024 50-60% Testis 4.400162629 Breast_cancer,PAAD NA NA boxplot CTD-2035E11.4 NA chr5 43033716 43034635 + 920 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2035E11.4 NA 0.141 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-272L13.4 NA chr1 97855575 97856825 + 1251 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-272L13.4 NA 0.012 30-40% NA NA Breast_cancer,PAAD NA NA boxplot RP11-303E16.7 NA chr16 81077319 81078861 + 1543 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-303E16.7 NA 0.035 50-60% Testis 2.268526837 Breast_cancer,CRC,PAAD NA NA boxplot KRT17P8 keratin 17 pseudogene 8 chr12 9127783 9128645 + 863 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KRT17P8 NA 0.271 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-711D18.2 NA chr12 121391962 121399859 + 7898 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-711D18.2 NA 0.012 80-90% Testis 4.906892038 CRC,Normal NA NA boxplot DOCK9-AS2 DOCK9 antisense RNA 2 (head to head) chr13 99087819 99088625 + 807 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DOCK9-AS2 NA 0.212 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-218F10.3 NA chr4 163529771 163530697 + 927 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-218F10.3 NA 0.094 40-50% NA NA CRC,Normal,PAAD NA NA boxplot RP11-345J4.4 NA chr16 29467161 29467578 + 418 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-345J4.4 NA 0.035 90-100% NA NA CRC,Normal NA NA boxplot RP11-402D21.2 NA chr10 91908131 91909348 + 1218 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-402D21.2 NA 0.165 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-624A21.1 NA chr15 32182551 32186475 + 3925 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-624A21.1 NA 0.059 80-90% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot RP11-386D6.2 NA chr8 86765935 86818558 + 52624 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-386D6.2 NA 0.012 90-100% NA NA Normal NA NA boxplot AP000936.1 NA chr11 117035797 117036051 - 255 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AP000936.1 exo_circ_004766 0.929 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-110G21.2 NA chr8 51895957 51896374 - 418 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-110G21.2 NA 0.082 20-30% NA NA CRC,Normal NA NA boxplot RP11-436D10.3 NA chr10 62793562 62805887 - 12326 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-436D10.3 NA 0.024 0-10% NA NA Normal NA NA boxplot SNCA-AS1 SNCA antisense RNA 1 chr4 89836408 89841978 + 5571 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SNCA-AS1 NA 0.353 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-1197K16.2 NA chr17 82978525 82981738 + 3214 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1197K16.2 NA 0.012 30-40% Testis 4.058940378 Normal NA NA boxplot VDAC3P1 voltage-dependent anion channel 3 pseudogene 1 chr14 99964529 99965378 + 850 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=VDAC3P1 NA 0.012 80-90% NA NA NA NA NA boxplot KRT18P4 keratin 18 pseudogene 4 chr20 49956745 49958032 + 1288 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KRT18P4 NA 0.118 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-823P9.3 NA chr5 21481327 21484011 - 2685 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-823P9.3 NA 0.141 30-40% Testis 3.982215346 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CTD-3137H5.1 NA chr19 18441419 18443597 + 2179 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-3137H5.1 NA 0.024 70-80% Testis 3.83172996 Breast_cancer,CRC,HCC NA NA boxplot RP11-1078H9.1 NA chr14 90452063 90455117 - 3055 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1078H9.1 NA 0.047 70-80% Testis 4.877046991 Normal NA NA boxplot EIF4A2P1 eukaryotic translation initiation factor 4A2 pseudogene 1 chr18 12912844 12913906 + 1063 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=EIF4A2P1 NA 0.141 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CD24P2 CD24 molecule pseudogene 2 chr15 56071421 56071639 + 219 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CD24P2 NA 0.024 70-80% NA NA Breast_cancer,CHD,PAAD NA NA boxplot BMS1P9 BMS1, ribosome biogenesis factor pseudogene 9 chr9 63055641 63059217 + 3577 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=BMS1P9 NA 0.118 70-80% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-177B4.2 NA chr4 52680609 52692649 + 12041 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-177B4.2 NA 0.012 90-100% NA NA Breast_cancer,HCC NA NA boxplot AC025442.3 NA chr5 66144156 66144795 - 640 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC025442.3 NA 0.2 30-40% Testis 4.906892038 Breast_cancer,CRC,HCC,Normal NA NA boxplot RP11-432I13.5 NA chr10 45180400 45180616 + 217 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-432I13.5 NA 0.035 60-70% NA NA Breast_cancer,HCC,Normal NA NA boxplot ARSDP1 arylsulfatase D pseudogene 1 chrY 12354096 12387328 + 33233 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ARSDP1 NA 0.082 10-20% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-15A1.3 NA chr19 43891804 43901805 - 10002 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-15A1.3 NA 0.529 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-4M23.4 NA chr1 23949016 23949383 - 368 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-4M23.4 NA 0.024 80-90% Testis 4.906892038 CRC NA NA boxplot RP11-333E1.2 NA chr17 5240508 5241543 - 1036 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-333E1.2 NA 0.024 30-40% NA NA HCC,Normal NA NA boxplot RP11-486A14.1 NA chr12 93314809 93315941 + 1133 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-486A14.1 NA 0.035 70-80% Testis 3.040490782 Breast_cancer,CRC,HCC NA NA boxplot RP11-2C7.1 NA chr15 25865295 25877211 + 11917 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-2C7.1 NA 0.012 60-70% Testis 4.906892038 Breast_cancer,HCC NA NA boxplot RP1-229K20.9 NA chr6 41252696 41252858 + 163 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-229K20.9 NA 0.012 90-100% NA NA Normal NA NA boxplot TMED10P2 transmembrane emp24-like trafficking protein 10 (yeast) pseudogene 2 chr3 128538020 128538631 + 612 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TMED10P2 NA 0.706 10-20% NA NA CHD,CRC,HCC,Normal,PAAD CHD(up),CRC(down),PAAD(down) NA boxplot LINC00680 long intergenic non-protein coding RNA 680 chr6 57946074 57961501 - 15428 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00680 NA 0.906 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot SLC25A14P1 solute carrier family 25 (mitochondrial carrier, brain), member 14 pseudogene 1 chr4 83477524 83478424 + 901 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SLC25A14P1 NA 0.024 80-90% NA NA Breast_cancer,Normal NA NA boxplot RP5-844F9.1 NA chr7 44367140 44369292 - 2153 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-844F9.1 NA 0.012 50-60% NA NA Breast_cancer NA NA boxplot CTD-2653D5.1 NA chr20 47677901 47686297 + 8397 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2653D5.1 NA 0.059 50-60% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot RP11-129B9.1 NA chr12 95125760 95126389 + 630 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-129B9.1 NA 0.012 80-90% Skin 4.116620776 Breast_cancer NA NA boxplot RP11-225H22.7 NA chr10 103450196 103450852 + 657 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-225H22.7 NA 0.224 30-40% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot RP11-23D24.2 NA chr3 153384934 153980186 - 595253 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-23D24.2 NA 0.318 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-734I18.1 NA chr4 31997397 32155406 + 158010 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-734I18.1 exo_circ_049296,exo_circ_008050 0.588 0-10% Testis 4.0138324 Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),HCC(down) NA boxplot RP13-616I3.1 NA chr3 197505262 197506986 - 1725 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP13-616I3.1 NA 0.082 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-10L7.1 NA chr4 88284942 88331421 + 46480 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-10L7.1 NA 0.094 70-80% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot DND1P1 DND microRNA-mediated repression inhibitor 1 pseudogene 1 chr17 45585871 45586929 + 1059 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DND1P1 NA 0.247 50-60% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-889L3.4 NA chr5 178165702 178166562 + 861 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-889L3.4 NA 0.012 50-60% Testis 3.411201931 Breast_cancer NA NA boxplot GOLGA8UP golgin A8 family member U, pseudogene chr15 30791573 30801859 + 10287 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GOLGA8UP NA 0.294 40-50% Testis 4.197912475 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CTD-2026K11.6 NA chr15 75678548 75680752 + 2205 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2026K11.6 NA 0.024 80-90% NA NA Breast_cancer,CRC NA NA boxplot AC007099.1 NA chr2 75524068 75542706 + 18639 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC007099.1 NA 0.024 50-60% Pancreas 4.906892038 Breast_cancer,CRC NA NA boxplot RPS9P1 ribosomal protein S9 pseudogene 1 chr21 36132450 36133032 + 583 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPS9P1 NA 0.024 70-80% NA NA Breast_cancer,HCC,Normal NA NA boxplot HIST1H2APS4 histone cluster 1, H2a, pseudogene 4 chr6 26272021 26272701 - 681 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HIST1H2APS4 NA 0.094 20-30% Testis 4.906892038 Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot FAUP1 FBR-MuSV-associated ubiquitously expressed (fox derived) pseudogene 1 chr18 74389884 74390297 - 414 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FAUP1 NA 0.918 40-50% NA NA CHD,CRC,HCC,Normal,PAAD CHD(up) NA boxplot PROX1-AS1 PROX1 antisense RNA 1 chr1 214028891 214030901 - 2011 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PROX1-AS1 exo_circ_003123 0.447 20-30% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-61F12.1 NA chr16 84594393 84596826 + 2434 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-61F12.1 NA 0.094 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-356C4.5 NA chr16 90110574 90168225 - 57652 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-356C4.5 NA 0.176 70-80% Whole Blood 1.390097011 CRC,HCC,Normal,PAAD NA NA boxplot CTD-2329K10.1 NA chr15 44516650 44517483 - 834 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2329K10.1 NA 0.012 20-30% NA NA PAAD NA NA boxplot AC005355.2 NA chr5 134506552 134509229 + 2678 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC005355.2 NA 0.094 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC105402.4 NA chr2 148866470 148888823 - 22354 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC105402.4 NA 0.094 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CTD-2530H12.2 NA chr11 75775904 75776929 + 1026 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2530H12.2 NA 0.024 90-100% Testis 3.066419041 Breast_cancer,CRC,HCC,Normal NA NA boxplot RP11-436H11.1 NA chr5 124808828 124809233 - 406 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-436H11.1 NA 0.012 90-100% Testis 4.673309434 Breast_cancer,Normal NA NA boxplot ZNRF2P2 zinc and ring finger 2 pseudogene 2 chr7 29598795 29685255 - 86461 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ZNRF2P2 NA 0.671 10-20% NA NA CHD,CRC,HCC,Normal,PAAD HCC(up),PAAD(up) NA boxplot RP11-370I10.12 NA chr12 48198387 48202031 + 3645 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-370I10.12 NA 0.141 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-93H24.3 NA chr13 52651305 52652279 - 975 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-93H24.3 NA 0.035 80-90% NA NA CRC,HCC NA NA boxplot RP11-700A24.1 NA chr11 85852557 85854943 - 2387 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-700A24.1 NA 0.129 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-521I2.3 NA chr8 100913247 100914388 - 1142 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-521I2.3 NA 0.129 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot XX-C2158C6.1 NA chr6 170735751 170736545 + 795 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=XX-C2158C6.1 NA 0.024 90-100% Testis 4.906892038 PAAD NA NA boxplot RP11-849F2.4 NA chr17 8337697 8338758 + 1062 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-849F2.4 NA 0.012 90-100% Testis 4.796808328 Breast_cancer,Normal NA NA boxplot AC093627.9 NA chr7 135853 149466 - 13614 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC093627.9 NA 0.224 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC079776.2 NA chr2 129922863 129934317 - 11455 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC079776.2 NA 0.035 40-50% Testis 1.844601215 Breast_cancer,HCC,PAAD NA NA boxplot RP11-611O2.5 NA chr12 68841288 68843237 - 1950 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-611O2.5 NA 0.306 10-20% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot FABP5P1 fatty acid binding protein 5 pseudogene 1 chr13 73100575 73100985 - 411 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FABP5P1 NA 0.259 90-100% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-265E18.1 NA chr7 32845394 32846061 + 668 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-265E18.1 NA 0.012 60-70% NA NA NA NA NA boxplot ZDHHC20-IT1 ZDHHC20 intronic transcript 1 chr13 21376977 21377874 - 898 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ZDHHC20-IT1 NA 0.071 60-70% NA NA Breast_cancer,CRC,Normal,PAAD NA NA boxplot RP11-843B15.4 NA chr12 32109076 32109602 + 527 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-843B15.4 NA 0.235 10-20% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-204P2.3 NA chr6 136995170 136999504 + 4335 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-204P2.3 NA 0.106 70-80% NA NA CRC,HCC,Normal,PAAD NA NA boxplot AC007327.5 NA chr7 36229280 36231107 - 1828 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC007327.5 NA 0.012 10-20% Testis 4.906892038 PAAD NA NA boxplot VAV3-AS1 VAV3 antisense RNA 1 chr1 107964443 107994607 + 30165 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=VAV3-AS1 NA 0.271 50-60% Spleen 3.334091026 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-214O1.3 NA chr17 14327335 14329474 + 2140 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-214O1.3 NA 0.659 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RPS10P28 ribosomal protein S10 pseudogene 28 chr19 42670005 42670816 + 812 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPS10P28 NA 0.012 90-100% NA NA HCC,PAAD NA NA boxplot RP11-29H23.5 NA chr1 155614726 155660245 - 45520 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-29H23.5 NA 0.776 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-582J16.3 NA chr8 22565997 22567171 - 1175 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-582J16.3 NA 0.329 80-90% Spleen 1.990997667 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot FOCAD-AS1 FOCAD antisense RNA 1 chr9 20683304 20684688 - 1385 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FOCAD-AS1 exo_circ_039432 0.224 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-666A8.7 NA chr17 76549951 76550826 + 876 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-666A8.7 NA 0.035 80-90% NA NA CRC,Normal NA NA boxplot RP1-197B17.3 NA chr12 47706085 47742294 + 36210 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-197B17.3 NA 0.659 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-323J4.1 NA chr4 98251688 98261630 - 9943 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-323J4.1 NA 0.071 50-60% NA NA CRC,PAAD NA NA boxplot IPO7P2 importin 7 pseudogene 2 chr13 24122065 24123814 - 1750 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=IPO7P2 NA 0.588 50-60% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-483E17.1 NA chr2 174545385 174546335 - 951 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-483E17.1 NA 0.106 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot MFI2-AS1 MFI2 antisense RNA 1 chr3 196999460 197004744 + 5285 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MFI2-AS1 NA 0.106 50-60% NA NA HCC,Normal,PAAD NA NA boxplot RP11-63D14.1 NA chr11 38498995 38500186 + 1192 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-63D14.1 NA 0.035 40-50% Whole Blood 4.906892038 HCC,Normal NA NA boxplot LINC01370 long intergenic non-protein coding RNA 1370 chr20 40004477 40008529 + 4053 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01370 NA 0.035 70-80% NA NA Breast_cancer,HCC,Normal NA NA boxplot RP11-284H19.1 NA chr12 20361732 20370262 - 8531 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-284H19.1 NA 0.365 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CTD-2553L13.5 NA chr19 34645380 34646838 + 1459 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2553L13.5 NA 0.047 90-100% NA NA Breast_cancer,Normal,PAAD NA NA boxplot WWC2-AS2 WWC2 antisense RNA 2 chr4 183097017 183099199 - 2183 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=WWC2-AS2 NA 0.082 40-50% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot RP11-17A4.2 NA chr8 56445807 56552067 + 106261 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-17A4.2 NA 0.024 50-60% Testis 2.916401467 Breast_cancer,PAAD NA NA boxplot CTD-2286N8.2 NA chr18 79117207 79117920 + 714 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2286N8.2 NA 0.224 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot FLJ38576 uncharacterized LOC651430 chr4 186189032 186191490 - 2459 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FLJ38576 NA 0.035 10-20% NA NA Breast_cancer,HCC,Normal NA NA boxplot RP11-686D22.4 NA chr17 35403837 35404373 - 537 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-686D22.4 exo_circ_005451 0.412 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CTD-2193G5.1 NA chr5 103528434 103541985 - 13552 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2193G5.1 NA 0.012 10-20% NA NA Breast_cancer,Normal NA NA boxplot AC113607.3 NA chr2 910926 921124 - 10199 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC113607.3 NA 0.012 90-100% Testis 4.906892038 Breast_cancer NA NA boxplot RP11-405A12.2 NA chr12 19775451 20009937 + 234487 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-405A12.2 NA 0.059 50-60% Artery 3.746796894 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-1C8.5 NA chr8 103464389 103468985 + 4597 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1C8.5 NA 0.047 50-60% NA NA Breast_cancer,Normal,PAAD NA NA boxplot RP11-380M21.4 NA chr18 47878295 47882444 + 4150 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-380M21.4 NA 0.012 80-90% NA NA HCC NA NA boxplot RP1-290F12.3 NA chrX 53065053 53065548 - 496 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-290F12.3 NA 0.012 90-100% NA NA HCC NA NA boxplot SMC5-AS1 SMC5 antisense RNA 1 (head to head) chr9 70193997 70258866 - 64870 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SMC5-AS1 NA 0.224 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CTD-2060L22.1 NA chr7 10449820 10779944 - 330125 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2060L22.1 NA 0.047 30-40% NA NA Breast_cancer,CRC,HCC,PAAD NA NA boxplot RP11-424D14.1 NA chr1 69055898 69185003 + 129106 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-424D14.1 NA 0.012 90-100% Testis 4.906892038 Normal NA NA boxplot AC140912.1 NA chr16 73232055 73233970 + 1916 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC140912.1 NA 0.047 40-50% Brain 4.483903785 Breast_cancer,HCC,PAAD NA NA boxplot CTC-351M12.1 NA chr5 69186359 69189452 - 3094 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-351M12.1 NA 0.247 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-278A23.4 NA chr16 87683945 87684477 - 533 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-278A23.4 NA 0.024 50-60% NA NA Breast_cancer,CRC NA NA boxplot MTCYBP18 MT-CYB pseudogene 18 chr5 134923303 134924049 - 747 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MTCYBP18 NA 0.024 80-90% NA NA Breast_cancer,CRC,HCC NA NA boxplot RP11-382D8.5 NA chr1 235361153 235362540 + 1388 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-382D8.5 NA 0.012 50-60% Brain 1.318014653 Breast_cancer NA NA boxplot METTL15P1 methyltransferase like 15 pseudogene 1 chr3 156713884 156714928 - 1045 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=METTL15P1 NA 0.824 0-10% NA NA CHD,CRC,HCC,Normal,PAAD CRC(down) NA boxplot RP11-96O20.5 NA chr15 45585757 45586304 - 548 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-96O20.5 NA 0.024 70-80% NA NA Breast_cancer,CRC NA NA boxplot AC078842.4 NA chr7 137318592 137326953 + 8362 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC078842.4 NA 0.012 80-90% Testis 4.748718068 HCC NA NA boxplot RP11-338C15.5 NA chr1 212624284 212626771 - 2488 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-338C15.5 NA 0.012 90-100% Testis 4.575789146 Breast_cancer,CRC NA NA boxplot RNASEH1-AS1 RNASEH1 antisense RNA 1 chr2 3558492 3561745 + 3254 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RNASEH1-AS1 exo_circ_012502,exo_circ_021654 0.894 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot PHBP12 prohibitin pseudogene 12 chr1 50780340 50781150 + 811 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PHBP12 NA 0.071 20-30% NA NA Normal NA NA boxplot RP11-34D15.2 NA chr10 100335563 100346390 - 10828 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-34D15.2 NA 0.012 90-100% Testis 4.906892038 NA NA NA boxplot AP001625.6 NA chr21 42560374 42561934 - 1561 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AP001625.6 NA 0.012 30-40% NA NA HCC NA NA boxplot LINC01594 long intergenic non-protein coding RNA 1594 chr2 108167748 108217841 - 50094 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01594 NA 0.035 90-100% NA NA Normal NA NA boxplot RP5-1021I20.8 NA chr14 73885392 73885555 - 164 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-1021I20.8 NA 0.012 30-40% NA NA HCC NA NA boxplot EIF5AP4 eukaryotic translation initiation factor 5A pseudogene 4 chr10 80247219 80247683 - 465 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=EIF5AP4 NA 0.906 50-60% Testis 4.776746351 Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot NUTM2B-AS1 NUTM2B antisense RNA 1 chr10 79663088 79826594 - 163507 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NUTM2B-AS1 NA 1 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-112J3.15 NA chr9 35756712 35757940 - 1229 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-112J3.15 NA 0.165 40-50% NA NA CRC,HCC,Normal NA NA boxplot CTD-3222D19.8 NA chr19 16572624 16575340 + 2717 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-3222D19.8 NA 0.506 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot LINC00313 long intergenic non-protein coding RNA 313 chr21 43462094 43479534 - 17441 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00313 NA 0.035 60-70% NA NA HCC,PAAD NA NA boxplot HCP5B HLA complex P5B (non-protein coding) chr6 29871895 29873783 - 1889 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HCP5B NA 0.012 90-100% NA NA Breast_cancer,CRC NA NA boxplot RP11-120K24.4 NA chr13 113008778 113009424 + 647 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-120K24.4 NA 0.024 40-50% Pituitary 1.496817416 CRC,Normal NA NA boxplot RP11-739P1.3 NA chr4 184014035 184016382 + 2348 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-739P1.3 NA 0.024 40-50% NA NA PAAD NA NA boxplot RP11-328J6.1 NA chr12 103080950 103178675 - 97726 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-328J6.1 NA 0.118 10-20% NA NA CRC,HCC,Normal,PAAD NA NA boxplot PCDHB18P protocadherin beta 18 pseudogene chr5 141234333 141237529 + 3197 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PCDHB18P NA 0.047 10-20% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot GAS2L1P2 growth arrest specific 2 like 1 pseudogene 2 chr9 97075671 97081945 - 6275 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GAS2L1P2 NA 0.012 40-50% NA NA Breast_cancer,HCC,PAAD NA NA boxplot AC068196.1 NA chr2 181076051 181105968 - 29918 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC068196.1 NA 0.024 90-100% NA NA Normal NA NA boxplot NUTF2P7 nuclear transport factor 2 pseudogene 7 chrX 71016531 71016905 - 375 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NUTF2P7 NA 0.012 60-70% NA NA Breast_cancer NA NA boxplot NPTN-IT1 NPTN intronic transcript 1 chr15 73567012 73569294 - 2283 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NPTN-IT1 NA 0.153 20-30% NA NA Breast_cancer,CRC,Normal,PAAD NA NA boxplot PMS2P3 PMS1 homolog 2, mismatch repair system component pseudogene 3 chr7 75502930 75528148 - 25219 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PMS2P3 NA 1 0-10% NA NA CHD,CRC,HCC,Normal,PAAD CHD(up) NA boxplot LINC01402 long intergenic non-protein coding RNA 1402 chrX 120117642 120119700 - 2059 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01402 NA 0.071 10-20% NA NA CRC,Normal,PAAD NA NA boxplot RP11-180P8.3 NA chr17 62966817 62968549 - 1733 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-180P8.3 NA 0.024 70-80% NA NA CRC NA NA boxplot RP11-247C2.2 NA chr15 74125915 74129278 - 3364 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-247C2.2 NA 0.259 30-40% Testis 1.616833692 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot OOSP1 oocyte secreted protein 1, pseudogene chr11 59938455 59995845 + 57391 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=OOSP1 NA 0.012 90-100% Testis 3.570768591 CRC,Normal NA NA boxplot GUSBP11 glucuronidase, beta pseudogene 11 chr22 23638487 23717356 - 78870 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GUSBP11 NA 0.894 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CRC(up),HCC(down),PAAD(up) NA boxplot AL133493.2 NA chr21 45593654 45603056 + 9403 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AL133493.2 NA 0.259 10-20% Testis 1.346136122 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CTB-32O4.2 NA chr19 29213235 29215815 + 2581 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTB-32O4.2 NA 0.035 70-80% Testis 1.43538268 Breast_cancer,HCC,Normal NA NA boxplot RP11-404O13.1 NA chr1 158132040 158146929 - 14890 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-404O13.1 NA 0.024 80-90% Testis 3.814344859 Normal NA NA boxplot RP11-230G5.2 NA chr12 65466820 65642372 - 175553 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-230G5.2 NA 0.106 20-30% NA NA Breast_cancer,Normal,PAAD NA NA boxplot YWHAZP5 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta pseudogene 5 chr10 105686322 105687051 + 730 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=YWHAZP5 NA 0.965 30-40% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot XXbac-B461K10.4 NA chr22 17787652 17811497 - 23846 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=XXbac-B461K10.4 NA 0.918 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),PAAD(up) NA boxplot RP1-41P2.7 NA chr22 35685940 35689373 + 3434 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-41P2.7 NA 0.035 50-60% Testis 4.412054822 CRC,Normal NA NA boxplot RP11-368J21.4 NA chr16 22537478 22537584 - 107 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-368J21.4 NA 0.047 40-50% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot LINC01560 long intergenic non-protein coding RNA 1560 chrX 47483571 47484823 + 1253 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01560 NA 0.6 20-30% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP6-159A1.2 NA chrX 65956289 65957196 - 908 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP6-159A1.2 NA 0.753 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-462B18.2 NA chr9 32840598 32841762 - 1165 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-462B18.2 NA 0.012 30-40% NA NA NA NA NA boxplot CAMTA1-IT1 CAMTA1 intronic transcript 1 chr1 7368942 7370270 + 1329 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CAMTA1-IT1 NA 0.024 90-100% Testis 2.98267155 Breast_cancer,HCC NA NA boxplot CPB2-AS1 CPB2 antisense RNA 1 chr13 46052806 46113332 + 60527 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CPB2-AS1 NA 0.047 70-80% NA NA Breast_cancer,CRC,Normal NA NA boxplot CBX5P1 chromobox 5 pseudogene 1 chr3 88095408 88095968 - 561 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CBX5P1 NA 0.035 20-30% NA NA HCC,Normal NA NA boxplot FAM86EP family with sequence similarity 86, member A pseudogene chr4 3941760 3955419 - 13660 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FAM86EP NA 0.553 20-30% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP4-791M13.3 NA chr1 149048576 149051273 + 2698 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-791M13.3 NA 0.012 90-100% NA NA CRC NA NA boxplot RP11-278C7.1 NA chr12 32726383 32727387 - 1005 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-278C7.1 NA 0.412 10-20% NA NA CRC,HCC,Normal,PAAD NA NA boxplot XXbac-BPG181B23.6 NA chr6 31462728 31463336 - 609 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=XXbac-BPG181B23.6 NA 0.176 60-70% Testis 4.906892038 CRC,HCC,Normal,PAAD NA NA boxplot RP11-700F16.3 NA chr11 134178824 134186166 + 7343 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-700F16.3 NA 0.082 70-80% Testis 4.906892038 CRC,HCC,Normal,PAAD NA NA boxplot RP11-370I10.6 NA chr12 48350945 48442411 + 91467 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-370I10.6 NA 0.271 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot LINC00348 long intergenic non-protein coding RNA 348 chr13 71015141 71168417 + 153277 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00348 NA 0.012 80-90% Testis 4.457012183 CRC NA NA boxplot ANKRD36BP2 ankyrin repeat domain 36B pseudogene 2 chr2 88765807 88806612 + 40806 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ANKRD36BP2 NA 1 0-10% Testis 1.77324662 Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up) NA boxplot RP5-1031D4.2 NA chr10 7445558 7471942 - 26385 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-1031D4.2 NA 0.047 30-40% Spleen 2.495004117 Breast_cancer,CRC,HCC,Normal NA NA boxplot RP11-357N13.3 NA chr16 53981229 53981912 - 684 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-357N13.3 NA 0.012 80-90% Fallopian Tube 4.424430688 HCC NA NA boxplot RP11-128N14.5 NA chr13 97435946 97436168 + 223 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-128N14.5 NA 0.153 60-70% NA NA CRC,HCC,Normal NA NA boxplot CTB-174D11.2 NA chr5 168993000 168995677 + 2678 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTB-174D11.2 NA 0.012 90-100% NA NA Breast_cancer,HCC NA NA boxplot RP11-32B5.7 NA chr15 21298233 21325241 - 27009 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-32B5.7 NA 0.306 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-495P10.3 NA chr1 148328999 148344636 + 15638 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-495P10.3 NA 0.012 20-30% Testis 1.736770273 CRC NA NA boxplot LINC01619 long intergenic non-protein coding RNA 1619 chr12 91984976 92142914 - 157939 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01619 NA 0.588 10-20% NA NA CRC,HCC,Normal,PAAD CRC(up) NA boxplot AC142472.6 NA chr17 45146730 45148470 - 1741 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC142472.6 NA 0.494 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot OXCT1-AS1 OXCT1 antisense RNA 1 chr5 41870030 41872241 + 2212 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=OXCT1-AS1 NA 0.106 20-30% NA NA Breast_cancer,CHD,CRC,Normal NA NA boxplot RP11-497G19.1 NA chr12 116661582 116698065 + 36484 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-497G19.1 NA 0.047 20-30% NA NA CRC,Normal,PAAD NA NA boxplot RP11-328K2.1 NA chr8 58991720 58992938 - 1219 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-328K2.1 NA 0.059 40-50% Testis 4.906892038 CRC,Normal NA NA boxplot RP11-840I19.5 NA chr14 65003325 65003767 - 443 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-840I19.5 NA 0.247 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-517A5.6 NA chr16 16260866 16261235 - 370 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-517A5.6 NA 0.047 0-10% Testis 4.906892038 HCC,Normal,PAAD NA NA boxplot ITGA9-AS1 ITGA9 antisense RNA 1 chr3 37745432 37861780 - 116349 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ITGA9-AS1 exo_circ_049081,exo_circ_027505 0.965 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-411H5.1 NA chr1 101639548 101787572 + 148025 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-411H5.1 NA 0.047 80-90% Testis 4.906892038 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CTA-384D8.33 NA chr22 50597152 50597599 + 448 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTA-384D8.33 NA 0.047 10-20% NA NA CRC,Normal NA NA boxplot RP11-73E17.2 NA chr14 34874343 34876459 + 2117 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-73E17.2 NA 0.894 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot MTHFD2P7 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase pseudogene 7 chr3 179464346 179465328 + 983 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MTHFD2P7 NA 0.294 60-70% Cervix 4.906892038 Breast_cancer,CHD,HCC,Normal,PAAD NA NA boxplot BRAFP1 BRAF pseudogene 1 chrX 75582676 75585506 + 2831 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=BRAFP1 NA 0.188 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CTA-293F17.1 NA chr7 20328299 20331747 - 3449 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTA-293F17.1 NA 0.247 70-80% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CXADRP3 coxsackie virus and adenovirus receptor pseudogene 3 chr18 14477955 14499278 - 21324 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CXADRP3 NA 0.024 30-40% Testis 4.853452458 PAAD NA NA boxplot RP11-474B16.1 NA chr12 105304867 105327017 - 22151 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-474B16.1 NA 0.129 10-20% Kidney 3.24780519 CRC,Normal,PAAD NA NA boxplot RPL10AP2 ribosomal protein L10a pseudogene 2 chr8 47157118 47157771 + 654 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL10AP2 NA 0.176 90-100% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RPL23AP63 ribosomal protein L23a pseudogene 63 chr11 43718676 43719146 + 471 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL23AP63 NA 0.082 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot FOXD3-AS1 FOXD3 antisense RNA 1 (head to head) chr1 63320884 63324441 - 3558 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FOXD3-AS1 NA 0.012 70-80% NA NA Breast_cancer NA NA boxplot RP11-446H18.6 NA chr3 107329430 107329962 + 533 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-446H18.6 NA 0.082 70-80% NA NA CRC,HCC,Normal NA NA boxplot RP11-697E2.11 NA chr15 90281858 90282270 + 413 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-697E2.11 NA 0.035 70-80% NA NA CRC,PAAD NA NA boxplot RP1-170O19.14 NA chr7 27186573 27193448 - 6876 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-170O19.14 NA 0.012 70-80% NA NA NA NA NA boxplot RP11-97N19.2 NA chr20 19212852 19213477 - 626 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-97N19.2 NA 0.094 80-90% NA NA CRC,Normal NA NA boxplot AC009495.3 NA chr2 165833048 165839098 - 6051 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC009495.3 NA 0.141 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot HNRNPA1P50 heterogeneous nuclear ribonucleoprotein A1 pseudogene 50 chr12 92883773 92884700 + 928 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HNRNPA1P50 NA 0.024 90-100% NA NA HCC,Normal,PAAD NA NA boxplot ADAMTS19-AS1 ADAMTS19 antisense RNA 1 chr5 129459559 129460689 - 1131 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ADAMTS19-AS1 NA 0.012 50-60% NA NA Breast_cancer,HCC NA NA boxplot TPTE2P3 transmembrane phosphoinositide 3-phosphatase and tensin homolog 2 pseudogene 3 chr13 52522632 52586906 + 64275 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TPTE2P3 NA 0.071 20-30% Testis 3.159587994 CHD,CRC,HCC,PAAD NA NA boxplot IL20RB-AS1 IL20RB antisense RNA 1 chr3 136959125 136982196 - 23072 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=IL20RB-AS1 NA 0.012 90-100% Skin 3.311062703 NA NA NA boxplot CTD-2349P21.9 NA chr17 30792372 30792833 + 462 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2349P21.9 NA 0.459 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot GOLGA2P10 golgin A2 pseudogene 10 chr15 82472993 82513950 - 40958 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GOLGA2P10 NA 0.753 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up),HCC(down),PAAD(up) NA boxplot CDK2AP2P3 cyclin-dependent kinase 2 associated protein 2 pseudogene 3 chr9 63774870 63775241 - 372 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CDK2AP2P3 NA 0.094 60-70% Spleen 4.684700404 Breast_cancer,CHD,CRC,HCC,PAAD NA NA boxplot LRRC2-AS1 LRRC2 antisense RNA 1 chr3 46557398 46559694 + 2297 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LRRC2-AS1 NA 0.035 70-80% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot CTD-3099C6.5 NA chr19 52511282 52512342 - 1061 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-3099C6.5 NA 0.082 30-40% Testis 2.432677933 HCC,Normal NA NA boxplot TIMM8BP2 translocase of inner mitochondrial membrane 8B pseudogene 2 chrX 134166682 134166932 + 251 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TIMM8BP2 NA 0.118 90-100% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-166P13.4 NA chr17 57092145 57096425 - 4281 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-166P13.4 NA 0.012 90-100% Testis 2.900379439 Breast_cancer,HCC,Normal NA NA boxplot TTC41P tetratricopeptide repeat domain 41, pseudogene chr12 103843749 103930211 - 86463 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TTC41P exo_circ_045377,exo_circ_022614,exo_circ_037440 0.588 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-506M13.3 NA chr10 79660891 79677996 + 17106 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-506M13.3 NA 0.388 70-80% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-550I24.2 NA chr3 157175223 157381265 + 206043 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-550I24.2 exo_circ_027450,exo_circ_054161,exo_circ_054159,exo_circ_036974,exo_circ_054160 0.494 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-364B14.3 NA chrX 140091743 140092561 + 819 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-364B14.3 NA 0.024 10-20% Adrenal Gland 2.483787458 Breast_cancer,HCC,Normal NA NA boxplot RP11-142C4.6 NA chr11 58933643 59058659 - 125017 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-142C4.6 NA 0.918 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-434D2.3 NA chr17 20545371 20549952 + 4582 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-434D2.3 NA 0.012 30-40% Testis 4.906892038 Breast_cancer,Normal NA NA boxplot RP11-16P20.3 NA chr8 27733338 27756426 + 23089 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-16P20.3 NA 0.129 50-60% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot AC107218.3 NA chr2 214250040 214684246 - 434207 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC107218.3 NA 0.012 80-90% Testis 4.906892038 Breast_cancer NA NA boxplot RP11-408A13.3 NA chr9 14586766 14587326 - 561 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-408A13.3 NA 0.012 80-90% NA NA CRC NA NA boxplot RP11-473C18.3 NA chr15 43184079 43185141 - 1063 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-473C18.3 NA 0.082 80-90% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-352G18.2 NA chr15 66314914 66331703 - 16790 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-352G18.2 NA 0.035 50-60% NA NA HCC,PAAD NA NA boxplot CTD-2006M22.2 NA chr3 73624410 73627626 + 3217 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2006M22.2 NA 0.035 70-80% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot RP1-278O22.1 NA chr20 10753090 10753966 + 877 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-278O22.1 NA 0.035 70-80% NA NA CRC,HCC,Normal NA NA boxplot MTND6P5 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 6 pseudogene 5 chr9 5091093 5091604 + 512 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MTND6P5 NA 0.059 60-70% Testis 4.195196424 CRC,Normal,PAAD NA NA boxplot CTD-2384A14.1 NA chr14 28830244 28968400 + 138157 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2384A14.1 NA 0.012 60-70% Testis 4.906892038 Normal NA NA boxplot CCDC26 CCDC26 long non-coding RNA chr8 129351691 129680239 - 328549 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CCDC26 exo_circ_022281,exo_circ_055594 0.576 20-30% Spleen 4.166696419 Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot PKIA-AS1 PKIA antisense RNA 1 chr8 78426103 78558503 - 132401 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PKIA-AS1 exo_circ_055730 0.059 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CMP21-97G8.2 NA chr21 34425508 34426017 + 510 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CMP21-97G8.2 NA 0.012 90-100% NA NA NA NA NA boxplot LINC01098 long intergenic non-protein coding RNA 1098 chr4 177728757 177990750 + 261994 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01098 NA 0.024 90-100% NA NA Breast_cancer,PAAD NA NA boxplot ABHD17AP5 abhydrolase domain containing 17A pseudogene 5 chr22 22114844 22118005 - 3162 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ABHD17AP5 NA 0.729 40-50% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot LINC01562 long intergenic non-protein coding RNA 1562 chr1 51195095 51235096 - 40002 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01562 NA 0.094 40-50% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot RP1-253P7.1 NA chr17 17777781 17779094 + 1314 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-253P7.1 NA 0.047 80-90% NA NA CRC,Normal,PAAD NA NA boxplot AC007193.8 NA chr19 46390515 46390852 - 338 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC007193.8 NA 0.176 60-70% NA NA Normal,PAAD NA NA boxplot LINC01607 long intergenic non-protein coding RNA 1607 chr8 79768142 79802842 + 34701 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01607 NA 0.047 60-70% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot AC114752.3 NA chr2 64338067 64341647 - 3581 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC114752.3 NA 0.929 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down) NA boxplot RPL23AP65 ribosomal protein L23a pseudogene 65 chr11 9606142 9606609 + 468 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL23AP65 NA 0.341 80-90% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot CTC-308K20.2 NA chr5 172954907 172957162 + 2256 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-308K20.2 NA 0.035 30-40% Prostate 2.772753535 HCC,PAAD NA NA boxplot BAGE2 B melanoma antigen family member 2 chr21 10413477 10516431 + 102955 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=BAGE2 NA 0.565 70-80% Testis 4.296356091 Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-923I11.4 NA chr12 51815043 51842106 + 27064 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-923I11.4 NA 0.024 30-40% Testis 2.868692009 Breast_cancer,Normal,PAAD NA NA boxplot WDR82P2 WD repeat domain 82 pseudogene 2 chr1 91534666 91535593 - 928 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=WDR82P2 NA 0.129 80-90% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-78F17.1 NA chr18 976589 1174823 + 198235 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-78F17.1 NA 0.012 90-100% Testis 4.906892038 Breast_cancer,CRC NA NA boxplot MTND4P23 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 pseudogene 23 chr2 201213298 201214660 - 1363 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MTND4P23 NA 0.012 80-90% NA NA Breast_cancer,Normal NA NA boxplot CTD-2083E4.4 NA chr5 213898 217279 - 3382 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2083E4.4 NA 0.224 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC011515.2 NA chr19 54671231 54672591 + 1361 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC011515.2 NA 0.024 50-60% Spleen 1.267963694 Breast_cancer,CRC,PAAD NA NA boxplot RP11-264B14.2 NA chr17 61069856 61070356 - 501 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-264B14.2 NA 0.388 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-145A3.1 NA chr1 225700604 225752243 + 51640 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-145A3.1 NA 0.012 70-80% Muscle 3.180795459 HCC NA NA boxplot DNM1P51 NA chr15 84398316 84411701 - 13386 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DNM1P51 NA 0.094 70-80% NA NA Breast_cancer,Normal,PAAD NA NA boxplot RP11-62E14.2 NA chr9 3364329 3364792 - 464 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-62E14.2 NA 0.059 80-90% NA NA CRC,Normal NA NA boxplot RP11-395N21.2 NA chr9 35360540 35362054 - 1515 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-395N21.2 NA 0.012 70-80% NA NA Normal NA NA boxplot RP11-497H16.5 NA chr5 70516387 70555266 - 38880 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-497H16.5 NA 0.471 20-30% NA NA CRC,HCC,Normal,PAAD CRC(up) NA boxplot RP11-374M1.5 NA chr9 61865755 61866965 - 1211 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-374M1.5 NA 0.024 20-30% NA NA HCC,PAAD NA NA boxplot AC114812.10 NA chr2 233750617 233753656 + 3040 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC114812.10 NA 0.024 40-50% NA NA PAAD NA NA boxplot CTA-360L10.1 NA chr7 107066591 107133733 - 67143 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTA-360L10.1 NA 0.094 80-90% Testis 3.946330937 CRC,HCC,Normal NA NA boxplot RP3-481A17.1 NA chrX 76029895 76030330 + 436 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-481A17.1 NA 0.012 90-100% Pituitary 4.718895389 PAAD NA NA boxplot RP11-219A15.4 NA chr17 16788057 16816540 + 28484 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-219A15.4 NA 0.024 60-70% NA NA HCC,Normal NA NA boxplot APTR Alu-mediated CDKN1A/p21 transcriptional regulator (non-protein coding) chr7 77657660 77696265 - 38606 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=APTR NA 0.788 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD PAAD(up) NA boxplot OR7E109P olfactory receptor family 7 subfamily E member 109 pseudogene chr9 90742526 90743380 - 855 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=OR7E109P NA 0.165 30-40% Testis 4.906892038 CRC,HCC,Normal NA NA boxplot LINC01431 long intergenic non-protein coding RNA 1431 chr20 23356594 23358116 - 1523 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01431 NA 0.141 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot TDGF1P3 teratocarcinoma-derived growth factor 1 pseudogene 3 chrX 110520312 110523021 + 2710 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TDGF1P3 NA 0.306 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC002075.3 NA chr7 93777839 93778514 + 676 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC002075.3 NA 0.047 0-10% NA NA Breast_cancer,HCC,PAAD NA NA boxplot AC011648.1 NA chr15 70195638 70198509 - 2872 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC011648.1 NA 0.012 80-90% NA NA Breast_cancer NA NA boxplot RP11-235C23.5 NA chr9 105554035 105558029 - 3995 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-235C23.5 NA 0.012 90-100% Testis 4.347309565 CRC,PAAD NA NA boxplot AC007969.4 NA chr2 171492905 171493095 + 191 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC007969.4 NA 0.012 70-80% NA NA CRC NA NA boxplot RP13-39P12.2 NA chr10 77780337 77781876 - 1540 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP13-39P12.2 NA 0.035 70-80% Testis 1.764166786 Breast_cancer,CRC NA NA boxplot RP11-529H2.2 NA chr4 87317170 87345210 - 28041 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-529H2.2 NA 0.047 70-80% NA NA CRC,Normal NA NA boxplot RP11-15A1.8 NA chr19 43976815 43977448 + 634 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-15A1.8 NA 0.106 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-122K13.12 NA chr10 133295187 133295977 - 791 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-122K13.12 NA 0.212 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC090952.5 NA chr3 14648194 14649432 - 1239 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC090952.5 NA 0.024 80-90% Testis 3.795903162 CRC NA NA boxplot RP1-5O6.5 NA chr22 38231320 38232248 + 929 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-5O6.5 NA 0.341 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-22A3.2 NA chr4 12859101 12864961 - 5861 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-22A3.2 NA 0.012 50-60% NA NA NA NA NA boxplot CTD-3193O13.13 NA chr19 7912648 7913518 - 871 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-3193O13.13 NA 0.165 50-60% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot CTD-2139B15.1 NA chr5 17306381 17306960 + 580 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2139B15.1 NA 0.012 70-80% Prostate 4.04054938 Breast_cancer NA NA boxplot AC003991.3 NA chr7 88219359 88304367 + 85009 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC003991.3 NA 0.153 30-40% Testis 2.185279874 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC007131.1 NA chr2 59217708 59279400 + 61693 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC007131.1 NA 0.012 30-40% Testis 4.278527058 HCC NA NA boxplot RP11-259N19.1 NA chr2 74832655 74833987 - 1333 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-259N19.1 NA 0.588 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-338I21.1 NA chr10 84138420 84140582 - 2163 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-338I21.1 NA 0.141 60-70% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot ATP6V0CP2 ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c pseudogene 2 chr3 111478737 111478943 + 207 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ATP6V0CP2 NA 0.024 30-40% Bladder 4.906892038 CRC,HCC,Normal NA NA boxplot RPS18P9 ribosomal protein S18 pseudogene 9 chr6 149594084 149594543 + 460 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPS18P9 NA 0.294 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-331F9.4 NA chr9 35646270 35647099 + 830 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-331F9.4 NA 0.071 80-90% Spleen 1.770282608 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-77H9.6 NA chr16 8869251 8870032 + 782 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-77H9.6 NA 0.024 90-100% Liver 2.673150217 Breast_cancer,CRC NA NA boxplot LINC01419 long intergenic non-protein coding RNA 1419 chr8 83403758 83408900 + 5143 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01419 NA 0.082 20-30% NA NA Breast_cancer,CHD,CRC,HCC,PAAD NA NA boxplot KRTAP5-AS1 KRTAP5-1/KRTAP5-2 antisense RNA 1 chr11 1571353 1599184 + 27832 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KRTAP5-AS1 NA 0.506 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-317F20.2 NA chr10 114501997 114502347 - 351 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-317F20.2 NA 0.047 80-90% NA NA CRC,Normal NA NA boxplot RPL7P1 ribosomal protein L7 pseudogene 1 chr5 150094302 150095048 + 747 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL7P1 NA 1 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-680F20.9 NA chr11 125903247 125938916 - 35670 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-680F20.9 NA 0.024 90-100% NA NA Breast_cancer,CRC NA NA boxplot RP11-102M11.2 NA chr3 136752630 136755780 + 3151 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-102M11.2 NA 0.059 80-90% Testis 3.220031561 CRC,HCC,Normal NA NA boxplot SMAD9-IT1 SMAD9 intronic transcript 1 chr13 36849366 36850046 - 681 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SMAD9-IT1 NA 0.047 20-30% NA NA HCC,PAAD NA NA boxplot RP11-67A1.2 NA chr16 68077340 68122271 + 44932 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-67A1.2 NA 0.929 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-257P3.3 NA chr8 81521618 81533275 + 11658 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-257P3.3 NA 0.282 90-100% Testis 4.087274214 CRC,HCC,Normal,PAAD NA NA boxplot RP11-883A18.3 NA chr18 10594590 10604798 + 10209 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-883A18.3 NA 0.024 40-50% Testis 1.572846424 Breast_cancer,PAAD NA NA boxplot LINC01580 long intergenic non-protein coding RNA 1580 chr15 93900701 93984150 + 83450 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01580 NA 0.012 90-100% NA NA Normal NA NA boxplot RP3-468B3.2 NA chr6 33893323 33927631 + 34309 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-468B3.2 NA 0.012 10-20% Testis 4.872528492 Breast_cancer,HCC NA NA boxplot TMSB4XP8 thymosin beta 4, X-linked pseudogene 8 chr4 90838903 90839037 - 135 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TMSB4XP8 NA 1 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot AP000302.58 NA chr21 33482499 33484258 - 1760 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AP000302.58 NA 0.012 60-70% Testis 1.742773998 PAAD NA NA boxplot DEPDC1-AS1 DEPDC1 antisense RNA 1 chr1 68496676 68538627 + 41952 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DEPDC1-AS1 NA 0.012 80-90% NA NA Breast_cancer,CRC NA NA boxplot RP4-569M23.4 NA chr20 47348137 47349142 - 1006 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-569M23.4 NA 0.035 10-20% NA NA CRC,Normal NA NA boxplot KRT18P7 keratin 18 pseudogene 7 chr14 70594552 70595770 + 1219 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KRT18P7 NA 0.047 40-50% NA NA Breast_cancer,HCC,PAAD NA NA boxplot RP11-91P24.7 NA chr11 77829654 77872262 - 42609 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-91P24.7 NA 0.047 10-20% NA NA Normal,PAAD NA NA boxplot RP11-733O18.1 NA chrX 5653421 5726305 - 72885 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-733O18.1 NA 0.718 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),PAAD(down) NA boxplot CTD-2541M15.3 NA chr8 6615604 6617198 - 1595 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2541M15.3 NA 0.412 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-91H12.3 NA chr5 175972611 175985856 + 13246 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-91H12.3 NA 0.012 90-100% Testis 4.906892038 Breast_cancer,CRC NA NA boxplot SATB2-AS1 SATB2 antisense RNA 1 chr2 199457700 199476935 + 19236 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SATB2-AS1 NA 0.047 40-50% Colon 3.866198108 Breast_cancer,Normal NA NA boxplot RP11-363I22.3 NA chr1 150780272 150780644 + 373 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-363I22.3 NA 0.012 80-90% NA NA HCC NA NA boxplot RP11-357G3.2 NA chr4 3312512 3313058 + 547 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-357G3.2 NA 0.047 90-100% NA NA Breast_cancer,CRC,Normal NA NA boxplot DNAJC19P5 DnaJ heat shock protein family (Hsp40) member C19 pseudogene 5 chr2 177229191 177229506 - 316 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DNAJC19P5 NA 0.388 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-304F15.7 NA chr17 49834239 49836454 + 2216 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-304F15.7 NA 0.176 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot AF146191.4 NA chr4 189780336 189940271 - 159936 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AF146191.4 NA 0.329 20-30% Testis 1.303332738 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CTA-212D2.2 NA chr6 135055033 135060550 + 5518 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTA-212D2.2 NA 0.082 80-90% NA NA CRC,HCC,Normal,PAAD NA NA boxplot PRKY protein kinase, Y-linked, pseudogene chrY 7273972 7381548 + 107577 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PRKY NA 0.8 0-10% NA NA CHD,CRC,HCC,Normal,PAAD CHD(up),CRC(up),HCC(up),PAAD(up) NA boxplot AC002127.4 NA chr7 88710631 88756725 + 46095 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC002127.4 NA 0.094 40-50% NA NA Breast_cancer,CRC,Normal,PAAD NA NA boxplot EEF1A1P11 eukaryotic translation elongation factor 1 alpha 1 pseudogene 11 chr1 96446930 96448318 + 1389 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=EEF1A1P11 exo_circ_048425 1 10-20% NA NA CHD,CRC,HCC,Normal,PAAD CHD(up),HCC(up) NA boxplot RP11-692D12.1 NA chr4 73259209 73317953 + 58745 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-692D12.1 NA 0.271 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-307L14.1 NA chr5 65020038 65020551 + 514 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-307L14.1 NA 0.271 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-144O23.8 NA chr12 10831074 10832016 - 943 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-144O23.8 NA 0.118 80-90% NA NA CRC,HCC,Normal NA NA boxplot RP11-638L3.1 NA chr18 67516546 67899619 + 383074 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-638L3.1 NA 0.047 20-30% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot RP11-302M6.5 NA chr1 89939601 89940147 + 547 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-302M6.5 NA 0.035 70-80% NA NA CRC,Normal NA NA boxplot RP11-108K3.4 NA chr15 51367377 51369110 + 1734 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-108K3.4 NA 0.012 90-100% NA NA NA NA NA boxplot RP11-294L11.1 NA chr2 36656322 36656941 - 620 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-294L11.1 NA 0.012 80-90% Testis 4.906892038 HCC NA NA boxplot Z69720.2 NA chr16 90631 91102 + 472 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=Z69720.2 NA 0.024 40-50% NA NA CRC,Normal NA NA boxplot PAIP1P1 poly(A) binding protein interacting protein 1 pseudogene 1 chr6 30186798 30188614 - 1817 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PAIP1P1 NA 0.118 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CDKN2AIPNLP1 CDKN2A interacting protein N-terminal like pseudogene 1 chr1 226493188 226493489 - 302 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CDKN2AIPNLP1 NA 0.082 60-70% NA NA HCC,Normal,PAAD NA NA boxplot RP11-196G18.24 NA chr1 149845816 149846486 + 671 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-196G18.24 NA 0.459 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot ERP29P1 endoplasmic reticulum lumenal protein 29 pseudogene 1 chr20 52110344 52111049 - 706 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ERP29P1 NA 0.035 80-90% NA NA Breast_cancer,HCC,Normal NA NA boxplot MIR222HG MIR222 host gene chrX 45745211 45770274 - 25064 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MIR222HG NA 0.224 0-10% NA NA CRC,HCC,Normal,PAAD PAAD(up) NA boxplot RP11-138A9.1 NA chr7 130930209 130932206 - 1998 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-138A9.1 NA 0.224 10-20% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-141M1.4 NA chr13 33336216 33336716 - 501 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-141M1.4 NA 0.012 90-100% NA NA NA NA NA boxplot CTD-2619J13.16 NA chr19 58418560 58419310 + 751 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2619J13.16 NA 0.129 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot ZNF840P zinc finger protein 840, pseudogene chr20 46484461 46492640 + 8180 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ZNF840P NA 0.024 10-20% NA NA Normal NA NA boxplot AP000442.4 NA chr11 59561146 59566074 - 4929 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AP000442.4 NA 0.012 70-80% Testis 1.380743235 Breast_cancer,HCC NA NA boxplot PPIAP31 peptidylprolyl isomerase A (cyclophilin A) pseudogene 31 chr10 32188323 32188817 - 495 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PPIAP31 NA 1 20-30% NA NA CHD,CRC,HCC,Normal,PAAD CRC(down),HCC(down),PAAD(down) NA boxplot NRSN2-AS1 NRSN2 antisense RNA 1 chr20 320313 348224 - 27912 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NRSN2-AS1 NA 0.8 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up),PAAD(up) NA boxplot MLK7-AS1 MLK7 antisense RNA 1 chr2 173166446 173282036 - 115591 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MLK7-AS1 NA 0.106 40-50% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot LMLN-AS1 LMLN antisense RNA 1 chr3 198038321 198039234 - 914 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LMLN-AS1 exo_circ_033032,exo_circ_002181 0.118 50-60% Testis 4.039816767 CRC,HCC,Normal,PAAD NA NA boxplot RP11-680B3.2 NA chr3 148850933 148960112 - 109180 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-680B3.2 NA 0.012 10-20% Pancreas 4.84728856 CRC NA NA boxplot RP11-661O13.1 NA chr18 8635179 8636347 - 1169 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-661O13.1 NA 0.106 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP3-508I15.19 NA chr22 38734730 38738990 + 4261 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-508I15.19 NA 0.388 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-693M3.1 NA chr18 44986109 44989203 + 3095 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-693M3.1 NA 0.094 20-30% NA NA CRC,Normal,PAAD NA NA boxplot RP11-554D14.2 NA chr12 107903270 107903948 - 679 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-554D14.2 NA 0.094 70-80% NA NA CRC,Normal,PAAD NA NA boxplot FMO10P flavin containing monooxygenase 10, pseudogene chr1 166665885 166682196 + 16312 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FMO10P NA 0.024 30-40% Testis 4.906892038 Normal,PAAD NA NA boxplot RP11-788A4.1 NA chr3 152648146 152650447 + 2302 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-788A4.1 NA 0.024 60-70% NA NA HCC,Normal NA NA boxplot RPL13AP20 ribosomal protein L13a pseudogene 20 chr12 12875499 12876107 + 609 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL13AP20 NA 0.941 30-40% NA NA CHD,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down) NA boxplot RPS7P1 ribosomal protein S7 pseudogene 1 chr17 28467822 28468406 + 585 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPS7P1 NA 1 0-10% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot AC104088.1 NA chr2 172315287 172323737 + 8451 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC104088.1 exo_circ_041415 0.094 70-80% Testis 4.094870207 Breast_cancer,HCC,Normal,PAAD NA NA boxplot RP11-290I21.2 NA chr12 64266413 64266766 + 354 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-290I21.2 NA 0.012 80-90% NA NA NA NA NA boxplot AC064874.1 NA chr2 235773855 235783387 - 9533 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC064874.1 NA 0.024 20-30% Testis 4.906892038 Breast_cancer,Normal NA NA boxplot PKD1P6 polycystic kidney disease 1 (autosomal dominant) pseudogene 6 chr16 15125242 15154564 - 29323 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PKD1P6 NA 0.894 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down),HCC(down) NA boxplot RP4-665N4.8 NA chr1 35992109 36013630 - 21522 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-665N4.8 NA 0.094 70-80% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RAET1M retinoic acid early transcript 1M pseudogene chr6 150032769 150033566 + 798 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RAET1M NA 0.012 10-20% NA NA Normal NA NA boxplot BTN2A3P butyrophilin subfamily 2 member A3, pseudogene chr6 26421391 26432383 + 10993 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=BTN2A3P exo_circ_022131,exo_circ_002666 0.565 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot MSC-AS1 MSC antisense RNA 1 chr8 71828167 72118393 + 290227 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MSC-AS1 exo_circ_004444,exo_circ_039359 0.894 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),PAAD(up) NA boxplot RP11-417N10.4 NA chr16 71859680 71860676 + 997 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-417N10.4 NA 0.188 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-32B5.2 NA chr15 21250180 21260147 - 9968 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-32B5.2 NA 0.024 30-40% Testis 4.906892038 Normal,PAAD NA NA boxplot RP11-286E11.2 NA chr4 107936031 107941255 - 5225 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-286E11.2 NA 0.035 80-90% NA NA Breast_cancer,HCC NA NA boxplot RP11-338K17.8 NA chr12 123707602 123708386 - 785 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-338K17.8 NA 0.012 70-80% NA NA Normal NA NA boxplot RP11-148B18.4 NA chr1 94318479 94324569 - 6091 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-148B18.4 NA 0.024 50-60% NA NA HCC NA NA boxplot RP11-667K14.4 NA chr17 2042900 2043425 - 526 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-667K14.4 NA 0.294 10-20% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot RP11-52J3.2 NA chr6 157872571 157875210 - 2640 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-52J3.2 NA 0.082 30-40% Vagina 1.110342892 Breast_cancer,HCC,Normal,PAAD NA NA boxplot AC010740.1 NA chr2 140898423 140899106 + 684 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC010740.1 NA 0.012 40-50% NA NA Breast_cancer,Normal NA NA boxplot RP11-101C11.1 NA chr1 55217861 55234177 + 16317 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-101C11.1 NA 0.035 60-70% NA NA CRC,Normal,PAAD NA NA boxplot CTD-2036P10.5 NA chr15 42724102 42724922 + 821 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2036P10.5 NA 0.106 50-60% NA NA CRC,Normal,PAAD NA NA boxplot TLR8-AS1 TLR8 antisense RNA 1 chrX 12902817 12908333 - 5517 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TLR8-AS1 NA 0.024 10-20% NA NA Breast_cancer,HCC,Normal NA NA boxplot RP11-554A11.8 NA chr11 69147228 69171564 - 24337 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-554A11.8 NA 0.012 90-100% Testis 1.403891833 Normal NA NA boxplot AC007182.6 NA chr14 75574888 75579588 - 4701 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC007182.6 NA 0.012 60-70% Small Intestine 2.708098754 HCC NA NA boxplot RP11-690C23.4 NA chr1 246509038 246522592 - 13555 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-690C23.4 NA 0.012 70-80% Testis 4.906892038 Breast_cancer,CRC NA NA boxplot RP4-669H2.1 NA chr20 53397661 53412910 - 15250 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-669H2.1 NA 0.012 90-100% NA NA Breast_cancer,HCC NA NA boxplot RP11-107E5.3 NA chr2 144494265 144496878 - 2614 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-107E5.3 exo_circ_053518,exo_circ_053519 0.459 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(up),HCC(down) NA boxplot RP3-430N8.11 NA chr22 30976515 30978848 - 2334 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-430N8.11 NA 0.318 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot LINC00519 long intergenic non-protein coding RNA 519 chr14 51304416 51328386 - 23971 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00519 NA 0.012 80-90% NA NA HCC NA NA boxplot RP11-537I16.2 NA chr3 185606575 185606873 + 299 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-537I16.2 NA 0.082 70-80% NA NA CRC,Normal NA NA boxplot RP11-529F4.1 NA chr3 129381298 129394149 + 12852 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-529F4.1 NA 0.059 90-100% NA NA Breast_cancer,CRC,HCC,PAAD NA NA boxplot RP11-667K14.13 NA chr17 2101542 2101667 + 126 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-667K14.13 NA 0.012 40-50% NA NA Breast_cancer,Normal NA NA boxplot RP13-225O21.2 NA chr9 127213783 127221907 - 8125 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP13-225O21.2 NA 0.024 70-80% NA NA Breast_cancer,HCC NA NA boxplot RP11-497H16.9 NA chr5 70449636 70450353 + 718 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-497H16.9 NA 0.247 40-50% NA NA CRC,HCC,PAAD NA NA boxplot RP11-181K12.1 NA chr4 145830456 145832980 - 2525 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-181K12.1 NA 0.082 50-60% NA NA CRC,HCC,Normal NA NA boxplot RP5-944M2.3 NA chr12 126442481 126472790 + 30310 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-944M2.3 NA 0.012 80-90% Testis 3.345749409 HCC NA NA boxplot AC006547.8 NA chr22 20110821 20111875 - 1055 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC006547.8 NA 0.153 70-80% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-325D15.2 NA chr10 76558350 76560994 - 2645 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-325D15.2 NA 0.024 0-10% NA NA Normal NA NA boxplot GOLGA8EP golgin A8 family member E, pseudogene chr15 23157366 23170711 + 13346 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GOLGA8EP NA 0.047 30-40% Testis 4.582466319 Breast_cancer,HCC,Normal,PAAD NA NA boxplot SNRPCP11 small nuclear ribonucleoprotein polypeptide C pseudogene 11 chr3 125816082 125816286 - 205 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SNRPCP11 NA 0.024 80-90% NA NA HCC NA NA boxplot AC007381.3 NA chr2 60350595 60353016 - 2422 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC007381.3 NA 0.306 20-30% Skin 2.703758009 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-317N8.4 NA chr14 35881001 35881709 + 709 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-317N8.4 NA 0.059 50-60% NA NA Breast_cancer,Normal,PAAD NA NA boxplot AP000477.2 NA chr21 23960905 23967273 - 6369 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AP000477.2 NA 0.012 20-30% NA NA Breast_cancer,Normal,PAAD NA NA boxplot STK25P1 serine/threonine kinase 25 pseudogene 1 chr18 12911186 12912023 + 838 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=STK25P1 NA 0.141 40-50% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot AC128709.3 NA chr3 197445061 197458323 - 13263 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC128709.3 NA 0.024 0-10% NA NA PAAD NA NA boxplot LINC01505 long intergenic non-protein coding RNA 1505 chr9 106664754 106702662 + 37909 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01505 NA 0.306 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-693J15.6 NA chr12 91634887 91635644 + 758 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-693J15.6 NA 0.059 50-60% NA NA CRC,HCC,Normal NA NA boxplot RP11-375H19.2 NA chr1 166081183 166087483 + 6301 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-375H19.2 NA 0.059 20-30% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot RP11-157P1.4 NA chr20 62305432 62306325 - 894 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-157P1.4 NA 0.165 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-23N2.4 NA chr15 52577842 52598709 + 20868 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-23N2.4 NA 0.106 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP3-523K23.2 NA chr6 54943167 54945099 + 1933 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-523K23.2 NA 0.024 60-70% Skin 1.963771808 HCC NA NA boxplot CTD-2547G23.2 NA chr16 25238318 25239287 + 970 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2547G23.2 NA 0.012 10-20% NA NA Normal,PAAD NA NA boxplot LL0XNC01-116E7.2 uncharacterized LOC100128594 chrX 103917411 103919548 - 2138 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LL0XNC01-116E7.2 NA 0.329 40-50% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot AC019109.1 NA chr2 224169664 224171537 + 1874 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC019109.1 NA 0.012 90-100% Testis 4.30179137 Breast_cancer,Normal NA NA boxplot RPL7P26 ribosomal protein L7 pseudogene 26 chr6 17530899 17531652 - 754 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL7P26 NA 0.024 80-90% NA NA CHD,HCC,Normal,PAAD NA NA boxplot RP4-761J14.10 NA chr12 6742985 6743641 + 657 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-761J14.10 NA 0.035 20-30% NA NA Breast_cancer,CRC,HCC NA NA boxplot RP5-997D24.3 NA chr1 54285405 54287371 + 1967 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-997D24.3 NA 0.153 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-365D23.4 NA chr1 214482813 214483387 - 575 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-365D23.4 NA 0.165 80-90% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP5-1056L3.3 NA chr1 19608114 19608568 + 455 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-1056L3.3 NA 0.424 70-80% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot FER1L4 fer-1-like family member 4, pseudogene (functional) chr20 35558737 35607562 - 48826 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FER1L4 NA 0.071 10-20% NA NA Breast_cancer,CHD,HCC,Normal,PAAD NA NA boxplot AC007009.1 NA chr7 8262233 8262821 + 589 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC007009.1 NA 0.247 50-60% NA NA HCC,Normal,PAAD NA NA boxplot RPL21P4 ribosomal protein L21 pseudogene 4 chr17 43079302 43079780 + 479 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL21P4 NA 0.035 50-60% Cervix 4.906892038 HCC,Normal NA NA boxplot VDAC2P2 voltage-dependent anion channel 2 pseudogene 2 chr12 9036344 9037244 + 901 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=VDAC2P2 NA 0.071 30-40% NA NA Breast_cancer,CRC,Normal NA NA boxplot FAM138E family with sequence similarity 138 member E chr15 101954885 101956412 + 1528 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FAM138E NA 0.071 30-40% Testis 4.906892038 CHD,HCC,Normal,PAAD NA NA boxplot RP11-513I15.6 NA chr6 34248568 34286768 + 38201 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-513I15.6 NA 0.918 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot RHOQP2 ras homolog family member Q pseudogene 2 chr2 131460999 131461577 + 579 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RHOQP2 NA 0.941 20-30% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot GLYATL1P2 glycine-N-acyltransferase like 1 pseudogene 2 chr11 58878302 58893460 + 15159 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GLYATL1P2 exo_circ_050827 0.765 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down),HCC(down),PAAD(down) NA boxplot SEC63P1 SEC63 homolog, protein translocation regulator pseudogene 1 chr1 97545701 97546958 + 1258 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SEC63P1 NA 0.682 70-80% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot CYCSP34 cytochrome c, somatic pseudogene 34 chr13 40863599 40863902 - 304 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CYCSP34 NA 0.118 50-60% NA NA CRC,Normal NA NA boxplot RPL10AP1 ribosomal protein L10a pseudogene 1 chr14 103412119 103412761 - 643 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL10AP1 NA 0.024 80-90% NA NA Normal NA NA boxplot AC003682.17 NA chr19 57664280 57665039 + 760 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC003682.17 NA 0.035 50-60% Bladder 1.019174022 Breast_cancer,CRC,HCC NA NA boxplot KIAA0125P1 KIAA0125 pseudogene 1 chr15 20012741 20014208 + 1468 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KIAA0125P1 NA 0.012 90-100% NA NA Normal NA NA boxplot RP11-701B16.2 NA chr14 59479274 59525437 - 46164 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-701B16.2 NA 0.847 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down) NA boxplot PCNPP5 PEST containing nuclear protein pseudogene 5 chr13 48328084 48328564 - 481 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PCNPP5 NA 0.553 70-80% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot RNF138P1 ring finger protein 138, E3 ubiquitin protein ligase pseudogene 1 chr5 55530156 55530701 - 546 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RNF138P1 NA 0.129 80-90% NA NA HCC,Normal NA NA boxplot CTD-2227C6.3 NA chr5 82940458 82940983 - 526 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2227C6.3 NA 0.024 80-90% NA NA PAAD NA NA boxplot RP11-778D9.4 NA chr3 184149704 184150435 + 732 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-778D9.4 NA 0.871 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RPL23AP42 ribosomal protein L23a pseudogene 42 chr3 161429127 161429597 - 471 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL23AP42 NA 1 0-10% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot FLNB-AS1 FLNB antisense RNA 1 chr3 58162547 58170636 - 8090 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FLNB-AS1 NA 0.118 80-90% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC007952.6 NA chr17 19155727 19159111 - 3385 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC007952.6 NA 0.082 40-50% NA NA HCC,Normal,PAAD NA NA boxplot RPL21P39 ribosomal protein L21 pseudogene 39 chr3 145824257 145824739 - 483 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL21P39 NA 0.753 10-20% Ovary 3.465068711 CHD,CRC,HCC,Normal,PAAD CHD(up),HCC(up) NA boxplot RP11-1086F11.1 NA chr1 246605873 246608102 + 2230 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1086F11.1 exo_circ_048296,exo_circ_043218 0.153 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AP001412.1 NA chr21 37267784 37268497 + 714 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AP001412.1 exo_circ_046491,exo_circ_052306,exo_circ_035078,exo_circ_011543 0.106 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot NOS2P3 nitric oxide synthase 2 pseudogene 3 chr17 20436337 20447249 + 10913 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NOS2P3 NA 0.024 70-80% Testis 4.39469921 Breast_cancer,CRC NA NA boxplot RP1-15D23.2 NA chr1 172775905 173064015 + 288111 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-15D23.2 NA 0.612 20-30% Lung 2.343917168 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-460E7.8 NA chr9 65816932 65817472 - 541 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-460E7.8 NA 0.047 90-100% NA NA Breast_cancer,CRC,HCC,PAAD NA NA boxplot RP11-745L13.2 NA chr4 131930031 131975952 - 45922 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-745L13.2 NA 0.094 70-80% Testis 4.906892038 Breast_cancer,HCC,Normal,PAAD NA NA boxplot RP11-337N6.3 NA chr2 177317715 177318471 - 757 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-337N6.3 NA 0.094 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RPL3P3 ribosomal protein L3 pseudogene 3 chr14 56978409 56979621 + 1213 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL3P3 NA 0.012 90-100% NA NA Breast_cancer,CHD,Normal,PAAD NA NA boxplot RP11-797A18.5 NA chr15 77063397 77064910 - 1514 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-797A18.5 NA 0.082 40-50% NA NA Breast_cancer,CRC,Normal NA NA boxplot RP11-624L4.1 NA chr15 38865322 39427195 - 561874 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-624L4.1 NA 0.565 10-20% Prostate 1.521877136 CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot RP11-144A16.6 NA chr9 60918581 60927822 - 9242 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-144A16.6 NA 0.012 60-70% NA NA CRC NA NA boxplot RP11-555J4.4 NA chr9 32633454 32648685 + 15232 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-555J4.4 NA 0.035 90-100% Testis 4.906892038 Breast_cancer,Normal NA NA boxplot MIR519A2 microRNA 519a-2 chr19 53761961 53764199 + 2239 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MIR519A2 NA 0.012 60-70% Testis 4.906892038 NA NA NA boxplot RP11-841C19.1 NA chr12 19508904 19509245 + 342 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-841C19.1 NA 0.012 70-80% NA NA NA NA NA boxplot AC008079.10 NA chr22 18110759 18131154 - 20396 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC008079.10 NA 0.882 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),HCC(down),PAAD(down) NA boxplot LINC00336 long intergenic non-protein coding RNA 336 chr6 33586106 33593338 - 7233 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00336 NA 0.035 50-60% Testis 1.876685334 Breast_cancer,CRC,Normal NA NA boxplot CLIC4P3 chloride intracellular channel 4 pseudogene 3 chrX 41076999 41077750 + 752 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CLIC4P3 NA 0.541 50-60% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot ANKRD36BP1 ankyrin repeat domain 36B pseudogene 1 chr1 168245565 168247343 - 1779 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ANKRD36BP1 NA 0.188 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot MIRLET7BHG MIRLET7B host gene chr22 46053869 46113928 + 60060 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MIRLET7BHG NA 0.412 20-30% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot NUTM2HP NUT family member 2H, pseudogene chr10 50676743 50686326 + 9584 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NUTM2HP NA 0.176 70-80% Testis 1.192359705 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot KRT8P31 keratin 8 pseudogene 31 chr5 60743563 60744970 - 1408 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KRT8P31 NA 0.188 40-50% Skin 4.00608424 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot KRT73-AS1 KRT73 antisense RNA 1 chr12 52601467 52615305 + 13839 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KRT73-AS1 NA 0.294 40-50% NA NA Breast_cancer,CHD,CRC,HCC,Normal NA NA boxplot TAGLN2P1 transgelin 2 pseudogene 1 chr8 106697427 106698013 - 587 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TAGLN2P1 NA 0.706 70-80% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot TNKS2-AS1 TNKS2 antisense RNA 1 (head to head) chr10 91782839 91798291 - 15453 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TNKS2-AS1 NA 0.2 40-50% Testis 1.178790161 CRC,HCC,Normal,PAAD NA NA boxplot LINC01066 long intergenic non-protein coding RNA 1066 chr13 30995162 30996138 - 977 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01066 NA 0.012 90-100% Testis 4.906892038 Breast_cancer,HCC NA NA boxplot AP000487.5 NA chr11 70372246 70398488 - 26243 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AP000487.5 exo_circ_029241,exo_circ_022586,exo_circ_050858 0.847 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),HCC(down) NA boxplot AP002414.1 NA chr18 12056676 12057822 - 1147 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AP002414.1 NA 0.012 80-90% Testis 4.435498183 Breast_cancer,Normal NA NA boxplot RP11-271C24.2 NA chr3 113746872 113747408 - 537 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-271C24.2 NA 0.082 40-50% Testis 4.906892038 Breast_cancer,CRC,HCC,Normal NA NA boxplot LINC01583 long intergenic non-protein coding RNA 1583 chr15 82088594 82097694 + 9101 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01583 NA 0.024 70-80% NA NA CRC NA NA boxplot RP11-801F7.1 NA chr2 207753872 207754435 - 564 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-801F7.1 NA 0.153 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot AC005944.2 NA chr19 3052910 3053724 + 815 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC005944.2 NA 0.671 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot RPL34P26 ribosomal protein L34 pseudogene 26 chr13 50361410 50361763 - 354 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL34P26 NA 0.012 60-70% NA NA NA NA NA boxplot RPS15AP11 ribosomal protein S15a pseudogene 11 chr1 44780331 44780715 - 385 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPS15AP11 NA 0.012 20-30% NA NA HCC NA NA boxplot OR7E21P olfactory receptor family 7 subfamily E member 21 pseudogene chr3 130034553 130035539 - 987 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=OR7E21P NA 0.024 80-90% Testis 4.906892038 HCC,Normal NA NA boxplot BOLA3-AS1 BOLA3 antisense RNA 1 (head to head) chr2 74148009 74150061 + 2053 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=BOLA3-AS1 NA 0.812 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up),HCC(down) NA boxplot RP11-374M1.2 NA chr9 61972240 61976380 + 4141 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-374M1.2 NA 0.235 50-60% Spleen 1.40105729 CRC,HCC,Normal,PAAD NA NA boxplot RP11-403P17.6 NA chr16 66565620 66566001 - 382 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-403P17.6 NA 0.553 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP5-906C1.1 NA chr20 48821688 48849458 - 27771 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-906C1.1 NA 0.506 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-731D1.4 NA chr4 151333775 151353224 - 19450 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-731D1.4 NA 0.494 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot MKRN5P makorin ring finger protein 5, pseudogene chrX 74161062 74162528 - 1467 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MKRN5P NA 0.176 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AD000684.2 NA chr19 35262846 35264804 + 1959 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AD000684.2 NA 0.047 70-80% NA NA CRC,HCC,Normal NA NA boxplot RP11-488C13.4 NA chr14 76921840 76924649 - 2810 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-488C13.4 NA 0.012 90-100% Testis 4.906892038 Breast_cancer,CRC NA NA boxplot RP11-666A8.8 NA chr17 76545668 76557683 - 12016 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-666A8.8 NA 0.129 70-80% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-18B16.2 NA chr9 113650956 113682855 + 31900 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-18B16.2 NA 0.035 30-40% NA NA Breast_cancer,HCC,Normal NA NA boxplot LINC01399 long intergenic non-protein coding RNA 1399 chr22 35119824 35231056 - 111233 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01399 NA 0.094 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot SEC14L1P1 SEC14-like 1 pseudogene 1 chr11 43897456 43899636 + 2181 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SEC14L1P1 NA 0.294 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-113K21.6 NA chr11 83083687 83084138 + 452 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-113K21.6 NA 0.047 70-80% NA NA CRC,Normal NA NA boxplot SNAP25-AS1 SNAP25 antisense RNA 1 chr20 10021978 10368776 - 346799 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SNAP25-AS1 NA 0.141 60-70% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot CTD-2035E11.3 NA chr5 43018429 43024247 + 5819 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2035E11.3 NA 0.329 40-50% Testis 2.344679586 CRC,HCC,Normal,PAAD NA NA boxplot AC009312.1 NA chr2 117757563 117804174 - 46612 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC009312.1 NA 0.024 40-50% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot UCA1 urothelial cancer associated 1 (non-protein coding) chr19 15834730 15834804 + 75 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=UCA1 NA 0.282 0-10% Bladder 2.435836189 Breast_cancer,CHD,CRC,HCC,Normal,PAAD HCC(up) Yes boxplot RPS3AP26 ribosomal protein S3a pseudogene 26 chr7 98385801 98386584 - 784 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPS3AP26 NA 1 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CRC(down) NA boxplot MEOX2-AS1 MEOX2 antisense RNA 1 (head to head) chr7 15688378 15695491 + 7114 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MEOX2-AS1 NA 0.318 20-30% NA NA CHD,CRC,HCC,Normal,PAAD CHD(up) NA boxplot C9orf147 chromosome 9 open reading frame 147 chr9 112433816 112487204 - 53389 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=C9orf147 NA 0.176 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot LAP3P1 leucine aminopeptidase 3 pseudogene 1 chr6 82924829 82925122 - 294 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LAP3P1 NA 0.012 70-80% NA NA NA NA NA boxplot RP11-401I19.2 NA chr4 130808507 130811933 + 3427 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-401I19.2 NA 0.012 10-20% NA NA HCC NA NA boxplot RP11-127B20.2 NA chr4 82344876 82345540 - 665 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-127B20.2 NA 0.306 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-307E17.8 NA chr9 94332476 94360948 + 28473 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-307E17.8 NA 0.565 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-446H18.5 NA chr3 107272611 107421304 - 148694 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-446H18.5 exo_circ_036944,exo_circ_035511,exo_circ_021719 0.541 20-30% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot RP11-44M6.7 NA chr7 100572232 100578700 - 6469 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-44M6.7 NA 0.929 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-433J8.1 NA chr14 96592733 96595762 + 3030 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-433J8.1 NA 0.082 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-678G15.2 NA chr18 7741310 7754831 - 13522 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-678G15.2 NA 0.012 90-100% Thyroid 2.81605219 Breast_cancer,Normal NA NA boxplot RP11-107K17.2 NA chr18 26348347 26349004 + 658 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-107K17.2 NA 0.012 90-100% NA NA CRC NA NA boxplot LINC01517 long intergenic non-protein coding RNA 1517 chr10 28792668 28808219 + 15552 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01517 NA 0.024 80-90% NA NA CRC NA NA boxplot RP11-111F5.5 NA chr9 62376161 62435199 + 59039 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-111F5.5 NA 0.612 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-350N15.5 NA chr8 38382364 38383461 + 1098 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-350N15.5 NA 0.294 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-20D14.6 NA chr12 8788257 8795789 + 7533 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-20D14.6 NA 0.918 0-10% Whole Blood 3.618579162 Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),HCC(up) NA boxplot RP11-84C10.1 NA chr14 20983155 20985066 - 1912 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-84C10.1 NA 0.047 50-60% Testis 2.677633195 Breast_cancer,CRC,Normal NA NA boxplot AGAP1-IT1 AGAP1 intronic transcript 1 chr2 235505751 235507566 + 1816 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AGAP1-IT1 NA 0.035 40-50% NA NA Breast_cancer,HCC,Normal NA NA boxplot RP11-110L15.2 NA chr12 115810359 115886137 - 75779 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-110L15.2 NA 0.012 20-30% Salivary Gland 4.165443741 CRC NA NA boxplot RP1-5O6.4 NA chr22 38387918 38388857 - 940 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-5O6.4 NA 0.082 50-60% NA NA CRC,Normal,PAAD NA NA boxplot RP11-638I2.8 NA chr14 100333790 100354061 + 20272 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-638I2.8 NA 0.259 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-109E12.1 NA chr2 131461821 131463615 - 1795 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-109E12.1 NA 0.012 90-100% NA NA Normal NA NA boxplot AFG3L1P AFG3-like AAA ATPase 1, pseudogene chr16 89972586 90002161 + 29576 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AFG3L1P exo_circ_013134,exo_circ_020471,exo_circ_011271,exo_circ_034533 0.976 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot bP-2171C21.6 NA chr21 9082601 9083101 - 501 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=bP-2171C21.6 NA 0.071 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-168J18.6 NA chr3 52373652 52374882 + 1231 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-168J18.6 NA 0.929 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-488C13.1 NA chr14 76886377 76886750 - 374 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-488C13.1 NA 0.565 90-100% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RPSAP6 ribosomal protein SA pseudogene 6 chr10 74371535 74372416 + 882 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPSAP6 exo_circ_050679 0.106 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AP000473.5 NA chr21 16630827 16640683 + 9857 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AP000473.5 NA 0.012 10-20% NA NA Breast_cancer NA NA boxplot CPEB1-AS1 CPEB1 antisense RNA 1 chr15 82647770 82692820 + 45051 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CPEB1-AS1 NA 0.047 40-50% NA NA Breast_cancer,CRC,PAAD NA NA boxplot RP11-580I16.2 NA chr17 47603860 47649420 - 45561 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-580I16.2 exo_circ_031323 0.765 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot RPL7AP14 ribosomal protein L7a pseudogene 14 chr20 37444733 37445534 - 802 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL7AP14 NA 0.024 30-40% NA NA CHD,CRC NA NA boxplot RP11-420C9.1 NA chr2 65203571 65203813 - 243 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-420C9.1 NA 0.118 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot VDAC1P1 voltage-dependent anion channel 1 pseudogene 1 chrX 80929500 80930347 + 848 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=VDAC1P1 NA 0.871 30-40% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot AC144450.1 NA chr2 1546665 1620113 - 73449 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC144450.1 NA 0.047 50-60% Thyroid 3.750820798 Normal,PAAD NA NA boxplot RP11-493L12.5 NA chr12 47353754 47369935 + 16182 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-493L12.5 NA 0.388 40-50% Spleen 4.260237832 CRC,HCC,Normal,PAAD NA NA boxplot MTND1P14 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 1 pseudogene 14 chr17 19602259 19603208 + 950 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MTND1P14 NA 0.012 80-90% NA NA NA NA NA boxplot RP11-413H22.2 NA chr16 56409320 56411683 + 2364 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-413H22.2 NA 0.082 80-90% Testis 4.906892038 CRC,HCC,Normal,PAAD NA NA boxplot RP1-269O5.3 NA chrX 111930735 111931092 + 358 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-269O5.3 NA 0.012 40-50% NA NA PAAD NA NA boxplot RP11-382H24.2 NA chr9 13021694 13022892 - 1199 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-382H24.2 NA 0.012 50-60% NA NA HCC NA NA boxplot RP11-402J6.3 NA chr4 112564988 112565398 + 411 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-402J6.3 NA 0.729 70-80% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP5-907D15.3 NA chr20 58594417 58603973 + 9557 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-907D15.3 NA 0.012 90-100% Salivary Gland 3.665982983 Breast_cancer,PAAD NA NA boxplot RP11-800A3.4 NA chr11 73238975 73242335 + 3361 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-800A3.4 NA 0.812 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),PAAD(up) NA boxplot FAM90A25P family with sequence similarity 90, member A7 pseudogene chr8 12415080 12418090 - 3011 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FAM90A25P NA 0.012 20-30% NA NA CHD NA NA boxplot CTD-2033D15.1 NA chr15 39593580 39594231 - 652 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2033D15.1 NA 0.141 50-60% Testis 4.381299919 CRC,HCC,Normal,PAAD NA NA boxplot RP11-463J10.3 NA chr14 51967003 51969800 - 2798 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-463J10.3 NA 0.494 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RHOXF1P3 Rhox homeobox family member 1 pseudogene 3 chrX 119991393 119992543 + 1151 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RHOXF1P3 NA 0.047 40-50% NA NA Breast_cancer,HCC,Normal NA NA boxplot XXbac-BPG181B23.7 NA chr6 31394289 31395495 - 1207 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=XXbac-BPG181B23.7 NA 0.435 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot TMEM147-AS1 TMEM147 antisense RNA 1 chr19 35540738 35546029 - 5292 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TMEM147-AS1 NA 0.518 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD PAAD(up) NA boxplot RP11-672A2.4 NA chr11 76654169 76656712 - 2544 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-672A2.4 NA 0.894 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-720L8.1 NA chr15 37365027 37490808 - 125782 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-720L8.1 NA 0.012 40-50% Testis 4.246522183 CRC,Normal NA NA boxplot DCLRE1CP1 DNA cross-link repair 1C pseudogene 1 chr10 15015370 15021863 - 6494 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DCLRE1CP1 NA 0.188 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-342K2.1 NA chr17 62003700 62007518 - 3819 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-342K2.1 NA 0.647 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CRC(up),PAAD(up) NA boxplot RP1-187B23.1 NA chr1 25644544 25659111 - 14568 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-187B23.1 NA 0.059 0-10% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot TPRXL tetra-peptide repeat homeobox-like chr3 13937273 14082811 + 145539 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TPRXL NA 0.165 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot PSMC1P5 proteasome (prosome, macropain) 26S subunit, ATPase, 1 pseudogene 5 chr5 107195156 107195332 + 177 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PSMC1P5 NA 0.082 80-90% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-116G8.5 NA chr10 5524976 5525742 - 767 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-116G8.5 NA 0.012 70-80% NA NA Breast_cancer,PAAD NA NA boxplot RP3-465N24.5 NA chr1 25266102 25267136 - 1035 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-465N24.5 NA 0.576 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot DKFZP434L187 uncharacterized LOC26082 chr15 30196036 30214540 + 18505 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DKFZP434L187 NA 0.059 20-30% NA NA HCC,Normal,PAAD NA NA boxplot AC002454.1 NA chr7 92836483 92917187 + 80705 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC002454.1 exo_circ_044685 0.271 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot AC115522.3 NA chr19 43794309 43795658 - 1350 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC115522.3 NA 0.082 70-80% Skin 1.966921983 CRC,HCC,Normal,PAAD NA NA boxplot RP11-445P17.3 NA chr10 5234358 5263408 + 29051 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-445P17.3 NA 0.047 70-80% NA NA Breast_cancer,CRC,Normal NA NA boxplot YWHABP2 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta pseudogene 2 chr11 18490243 18490955 - 713 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=YWHABP2 NA 0.235 30-40% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-160E2.6 NA chr17 19112000 19112636 - 637 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-160E2.6 NA 0.341 10-20% NA NA CRC,HCC,Normal,PAAD PAAD(up) NA boxplot LINC01134 long intergenic non-protein coding RNA 1134 chr1 3900372 3917225 + 16854 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01134 NA 0.341 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-266I3.1 NA chrX 55054945 55055838 - 894 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-266I3.1 NA 0.012 10-20% NA NA Normal NA NA boxplot HLA-S major histocompatibility complex, class I, S (pseudogene) chr6 31382074 31382288 - 215 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HLA-S NA 0.012 40-50% NA NA CHD NA NA boxplot CTD-3057O21.1 NA chr16 87945058 87945202 - 145 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-3057O21.1 NA 0.012 60-70% Pituitary 3.836201389 NA NA NA boxplot RP11-384M20.1 NA chr17 18026072 18026771 - 700 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-384M20.1 NA 0.071 70-80% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot CTB-31O20.4 NA chr19 1822089 1824542 + 2454 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTB-31O20.4 NA 0.176 70-80% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-307B6.3 NA chr1 201893842 201899978 + 6137 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-307B6.3 NA 0.082 40-50% NA NA Breast_cancer,CRC,PAAD NA NA boxplot CTB-57H20.1 NA chr5 143605628 143828772 + 223145 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTB-57H20.1 NA 0.129 30-40% Pituitary 4.906892038 CRC,HCC,Normal,PAAD NA NA boxplot BNIP3P5 BCL2/adenovirus E1B 19kDa interacting protein 3 pseudogene 5 chr15 42313687 42314386 + 700 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=BNIP3P5 NA 0.118 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot AC147651.1 NA chr7 484107 496118 - 12012 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC147651.1 NA 0.012 90-100% NA NA Breast_cancer NA NA boxplot RP11-51F16.1 NA chr17 63700847 63702670 + 1824 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-51F16.1 NA 0.929 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-552F3.4 NA chr17 75818815 75820055 - 1241 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-552F3.4 NA 0.188 80-90% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-166P13.3 NA chr17 57078298 57085024 - 6727 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-166P13.3 NA 0.518 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot LINC01257 long intergenic non-protein coding RNA 1257 chr12 131165011 131212931 + 47921 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01257 NA 0.024 50-60% NA NA Breast_cancer,Normal NA NA boxplot LL0XNC01-237H1.2 NA chrX 102884414 102906158 + 21745 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LL0XNC01-237H1.2 NA 0.894 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-371I20.2 NA chr11 20131730 20135465 + 3736 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-371I20.2 NA 0.035 10-20% NA NA Breast_cancer,PAAD NA NA boxplot KB-1440D3.13 NA chr22 21661934 21662363 + 430 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KB-1440D3.13 NA 0.012 10-20% NA NA PAAD NA NA boxplot HOXC-AS2 HOXC cluster antisense RNA 2 chr12 53993810 53996785 - 2976 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HOXC-AS2 NA 0.059 30-40% NA NA Breast_cancer,HCC,PAAD NA NA boxplot HORMAD2-AS1 HORMAD2 antisense RNA 1 chr22 30008742 30080480 - 71739 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HORMAD2-AS1 NA 0.271 60-70% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot RPS2P55 ribosomal protein S2 pseudogene 55 chrX 40934982 40935864 - 883 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPS2P55 NA 1 0-10% NA NA CHD,CRC,HCC,Normal,PAAD CHD(up) NA boxplot EEF1A1P4 eukaryotic translation elongation factor 1 alpha 1 pseudogene 4 chr12 19456244 19457648 - 1405 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=EEF1A1P4 NA 0.012 30-40% NA NA Normal,PAAD NA NA boxplot RP11-810M2.2 NA chr17 4163910 4164713 + 804 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-810M2.2 NA 0.447 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-707A18.1 NA chr4 64914281 65004500 - 90220 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-707A18.1 NA 0.047 50-60% NA NA HCC,Normal NA NA boxplot RP11-295H24.5 NA chr15 49353485 49354034 + 550 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-295H24.5 NA 0.024 70-80% NA NA CRC,Normal NA NA boxplot RP11-689P11.2 NA chr4 8482270 8512610 + 30341 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-689P11.2 NA 0.059 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot MTCO1P48 MT-CO1 pseudogene 48 chr2 94899566 94900661 - 1096 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MTCO1P48 NA 0.012 50-60% NA NA PAAD NA NA boxplot LIN28B-AS1 NA chr6 104864464 104941447 - 76984 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LIN28B-AS1 NA 0.012 60-70% NA NA Breast_cancer,Normal NA NA boxplot RP11-185E8.2 NA chr3 171460612 171462256 + 1645 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-185E8.2 NA 0.918 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),HCC(down) NA boxplot RP11-290L1.2 NA chr12 76032658 76033897 + 1240 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-290L1.2 NA 0.106 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot XXYLT1-AS2 XXYLT1 antisense RNA 2 chr3 195147871 195152790 + 4920 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=XXYLT1-AS2 NA 0.494 30-40% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot LLNLR-304A6.1 NA chr19 2002580 2003581 - 1002 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LLNLR-304A6.1 NA 0.035 70-80% NA NA Breast_cancer,Normal NA NA boxplot RP11-16C1.2 NA chr17 75370947 75373736 - 2790 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-16C1.2 NA 0.165 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-137L10.5 NA chr10 73537803 73538391 + 589 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-137L10.5 NA 0.012 70-80% Thyroid 1.690761847 CRC NA NA boxplot RP11-382A20.2 NA chr15 83113617 83114566 - 950 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-382A20.2 NA 0.141 60-70% NA NA HCC,Normal,PAAD NA NA boxplot RPL23AP25 ribosomal protein L23a pseudogene 25 chr1 248936581 248937043 + 463 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL23AP25 NA 0.635 20-30% NA NA CHD,CRC,HCC,Normal,PAAD HCC(up) NA boxplot DPY19L2P4 DPY19L2 pseudogene 4 chr7 90119400 90125600 + 6201 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DPY19L2P4 NA 0.012 50-60% Testis 1.785041241 Normal NA NA boxplot RP11-344B5.2 NA chr9 129282458 129285728 + 3271 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-344B5.2 NA 0.494 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-594C13.1 NA chr14 87353070 87573022 - 219953 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-594C13.1 NA 0.024 30-40% Uterus 3.792238708 Normal NA NA boxplot SUGT1P3 SGT1 homolog, MIS12 kinetochore complex assembly cochaperone pseudogene 3 chr13 40882577 40921774 - 39198 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SUGT1P3 exo_circ_000369 0.647 10-20% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot LINC00668 long intergenic non-protein coding RNA 668 chr18 6919496 6929966 - 10471 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00668 NA 0.035 30-40% Testis 3.760753096 Breast_cancer,CRC,PAAD NA NA boxplot RP11-299P2.2 NA chr18 63207622 63208168 + 547 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-299P2.2 NA 0.012 90-100% NA NA HCC NA NA boxplot RUNDC3A-AS1 RUNDC3A antisense RNA 1 chr17 44299574 44315315 - 15742 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RUNDC3A-AS1 NA 0.282 20-30% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot HMGN2P19 high mobility group nucleosomal binding domain 2 pseudogene 19 chr1 229570532 229570796 + 265 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HMGN2P19 NA 0.012 90-100% NA NA CRC NA NA boxplot RP11-326I11.5 NA chr4 184471924 184472609 - 686 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-326I11.5 NA 0.141 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-141B14.2 NA chr2 113904086 113905258 + 1173 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-141B14.2 NA 0.106 40-50% NA NA CRC,Normal NA NA boxplot AP000439.3 NA chr11 69477133 69479940 - 2808 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AP000439.3 NA 0.024 40-50% NA NA Breast_cancer,HCC,PAAD NA NA boxplot CTD-3193K9.11 NA chr17 42751289 42751717 - 429 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-3193K9.11 NA 0.024 80-90% NA NA Normal,PAAD NA NA boxplot CTD-2619J13.27 NA chr19 58500505 58501137 + 633 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2619J13.27 NA 0.012 30-40% NA NA Breast_cancer,HCC NA NA boxplot CTD-2560K21.6 NA chr19 50555370 50557969 - 2600 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2560K21.6 NA 0.012 90-100% NA NA Breast_cancer,PAAD NA NA boxplot RP11-108L7.15 NA chr10 101060029 101061005 - 977 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-108L7.15 NA 0.106 70-80% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot DAP3P1 death associated protein 3 pseudogene 1 chr1 155586644 155602197 + 15554 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DAP3P1 NA 0.482 60-70% Testis 4.906892038 CHD,CRC,HCC,Normal,PAAD NA NA boxplot AC102953.4 NA chr7 1459937 1464008 + 4072 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC102953.4 NA 0.494 30-40% Testis 2.346181528 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot ABHD17AP3 abhydrolase domain containing 17A pseudogene 3 chr1 214605470 214608840 - 3371 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ABHD17AP3 NA 0.894 40-50% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-414J4.2 NA chr15 74816223 74831795 + 15573 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-414J4.2 NA 0.141 80-90% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-254F19.3 NA chr16 84928353 84939603 + 11251 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-254F19.3 exo_circ_005416 0.012 90-100% Testis 3.256236725 Breast_cancer,CRC NA NA boxplot RP13-15M17.1 NA chr1 9576427 9576985 + 559 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP13-15M17.1 NA 0.047 70-80% NA NA CRC,Normal NA NA boxplot CH507-42P11.2 NA chr21 6008604 6008810 + 207 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CH507-42P11.2 NA 0.012 90-100% NA NA NA NA NA boxplot RP11-426J5.3 NA chr18 48564795 48568342 + 3548 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-426J5.3 NA 0.071 20-30% NA NA Breast_cancer,CRC,PAAD NA NA boxplot RP11-78O7.2 NA chr17 19896590 19897287 - 698 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-78O7.2 NA 0.506 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-792A8.1 NA chr7 66434634 66435154 - 521 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-792A8.1 NA 0.071 60-70% Testis 3.586715898 CRC,Normal,PAAD NA NA boxplot RP11-379F4.9 NA chr3 158801257 158801935 - 679 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-379F4.9 NA 0.129 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CTC-265F19.3 NA chr19 2631954 2632849 + 896 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-265F19.3 NA 0.012 40-50% NA NA Breast_cancer,Normal NA NA boxplot RP11-428G5.5 NA chr12 31877079 31887203 - 10125 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-428G5.5 exo_circ_010899 0.435 30-40% Spleen 3.079240667 CRC,HCC,Normal,PAAD NA NA boxplot RP11-69J7.1 NA chr2 230410700 230412529 - 1830 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-69J7.1 NA 0.047 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-218I21.2 NA chr13 34079411 34080134 + 724 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-218I21.2 NA 0.024 70-80% NA NA PAAD NA NA boxplot AKR1B10P1 aldo-keto reductase family 1, member B10 pseudogene 1 chr10 67750284 67751225 + 942 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AKR1B10P1 NA 0.024 90-100% Stomach 3.612356737 Breast_cancer,HCC NA NA boxplot AC012358.8 NA chr2 55282350 55346049 + 63700 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC012358.8 NA 0.6 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC145124.2 NA chr8 12194467 12196280 + 1814 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC145124.2 NA 0.506 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CTD-2553L13.9 NA chr19 34675717 34677581 - 1865 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2553L13.9 NA 0.494 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-151N17.1 NA chr15 44557829 44559188 + 1360 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-151N17.1 NA 0.106 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot AC005083.1 NA chr7 20217577 20221700 + 4124 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC005083.1 exo_circ_044601 0.329 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-256L6.5 NA chr12 96160692 96172126 - 11435 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-256L6.5 NA 0.306 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-213G2.1 NA chr9 85753306 85786575 + 33270 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-213G2.1 NA 0.329 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-703H8.7 NA chr11 62336911 62338090 - 1180 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-703H8.7 NA 0.071 30-40% NA NA CRC,Normal,PAAD NA NA boxplot NPM1P46 nucleophosmin 1 (nucleolar phosphoprotein B23, numatrin) pseudogene 46 chr2 197379701 197380892 - 1192 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NPM1P46 NA 0.059 40-50% NA NA Breast_cancer,CHD NA NA boxplot OR4N1P olfactory receptor family 4 subfamily N member 1 pseudogene chr14 19796345 19797260 + 916 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=OR4N1P NA 0.012 60-70% Testis 4.906892038 Breast_cancer,HCC NA NA boxplot MIR3179-1 microRNA 3179-1 chr16 14901499 14902174 + 676 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MIR3179-1 NA 0.024 80-90% NA NA CRC,HCC NA NA boxplot RP11-243M5.4 NA chr12 130962175 130963028 + 854 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-243M5.4 NA 0.012 20-30% NA NA HCC NA NA boxplot AC093838.4 NA chr2 131492813 131521573 + 28761 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC093838.4 NA 0.929 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-344N10.2 NA chr10 73071295 73074008 + 2714 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-344N10.2 NA 0.094 60-70% Cervix 4.906892038 HCC,Normal,PAAD NA NA boxplot MIR155HG MIR155 host gene chr21 25561909 25575168 + 13260 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MIR155HG NA 0.553 20-30% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot CH507-42P11.1 NA chr21 5972956 5973333 - 378 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CH507-42P11.1 NA 0.412 90-100% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-25K21.6 NA chr1 161513176 161605099 + 91924 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-25K21.6 NA 0.824 20-30% NA NA CRC,HCC,Normal,PAAD CRC(up) NA boxplot RP11-505E24.2 NA chr15 101050732 101086066 - 35335 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-505E24.2 NA 0.188 60-70% Testis 4.312931361 Breast_cancer,CRC,HCC,Normal NA NA boxplot RP11-483P21.6 NA chr16 83929796 83931223 - 1428 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-483P21.6 NA 0.024 80-90% Testis 2.549426343 Breast_cancer,Normal NA NA boxplot RP11-55J15.2 NA chr8 128010188 128010428 - 241 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-55J15.2 NA 0.012 30-40% NA NA PAAD NA NA boxplot RP11-234O6.2 NA chr4 161378953 161388417 + 9465 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-234O6.2 NA 0.012 90-100% NA NA HCC NA NA boxplot AL590762.11 NA chrX 71420083 71420514 - 432 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AL590762.11 NA 0.035 20-30% NA NA Normal,PAAD NA NA boxplot RP11-762B21.5 NA chr11 123135923 123136376 - 454 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-762B21.5 NA 0.012 10-20% NA NA Breast_cancer NA NA boxplot OR2U1P olfactory receptor family 2 subfamily U member 1 pseudogene chr6 29262703 29264079 - 1377 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=OR2U1P NA 0.012 80-90% Testis 4.906892038 HCC NA NA boxplot CTC-338M12.2 NA chr5 181191046 181191852 - 807 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-338M12.2 NA 0.024 90-100% Testis 4.72286649 Breast_cancer,HCC NA NA boxplot RP4-657E11.10 NA chr1 19297080 19297903 + 824 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-657E11.10 NA 0.012 40-50% NA NA Normal NA NA boxplot MAFG-AS1 MAFG antisense RNA 1 (head to head) chr17 81927829 81930753 + 2925 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MAFG-AS1 NA 0.106 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-640L9.1 NA chr3 36819276 36822498 - 3223 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-640L9.1 NA 0.129 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CTD-2017C7.2 NA chr14 101796555 101810321 - 13767 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2017C7.2 NA 0.353 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-583F2.6 NA chr17 64951498 64951609 - 112 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-583F2.6 NA 0.012 30-40% Pituitary 1.693506194 CRC NA NA boxplot AC005104.3 NA chr2 241351340 241353104 - 1765 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC005104.3 NA 0.306 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot FAM149B1P1 family with sequence similarity 149, member B2 chr15 96756987 96758596 + 1610 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FAM149B1P1 NA 0.224 20-30% Testis 4.122324073 CRC,HCC,Normal,PAAD NA NA boxplot RP11-630D6.5 NA chr4 75980790 76005942 + 25153 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-630D6.5 NA 0.035 30-40% Spleen 4.48030474 CRC,HCC,Normal NA NA boxplot DAB1-AS1 DAB1 antisense RNA 1 chr1 57860532 57880905 + 20374 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DAB1-AS1 NA 0.012 0-10% NA NA Breast_cancer,PAAD NA NA boxplot ARF1P2 ADP ribosylation factor 1 pseudogene 2 chr12 120845110 120845647 - 538 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ARF1P2 NA 0.082 50-60% NA NA Breast_cancer,CRC,Normal NA NA boxplot FSCN1P1 fascin actin-bundling protein 1 pseudogene 1 chr15 34494420 34495900 + 1481 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FSCN1P1 NA 0.035 90-100% NA NA Breast_cancer,HCC,Normal NA NA boxplot RP11-744K17.1 NA chr17 22420022 22424731 + 4710 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-744K17.1 NA 0.012 80-90% Testis 4.906892038 Breast_cancer,PAAD NA NA boxplot RP11-409I10.2 NA chr14 57578632 57581320 + 2689 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-409I10.2 NA 0.035 90-100% NA NA CRC,PAAD NA NA boxplot HMGB3P4 high mobility group box 3 pseudogene 4 chr13 99372173 99372686 + 514 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HMGB3P4 NA 0.235 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot MIR3180-1 microRNA 3180-1 chr16 14911220 14911313 + 94 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MIR3180-1 NA 0.024 70-80% Testis 1.306086888 Breast_cancer,HCC NA NA boxplot RP5-1068E13.7 NA chr20 18794529 18796067 + 1539 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-1068E13.7 NA 0.153 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP5-1165K10.2 NA chr7 43951910 44019151 - 67242 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-1165K10.2 NA 0.882 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot DDX10P2 DEAD-box helicase 10 pseudogene 2 chr9 82086155 82088768 - 2614 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DDX10P2 NA 0.024 90-100% Testis 4.906892038 Breast_cancer,Normal NA NA boxplot RPS3AP34 ribosomal protein S3a pseudogene 34 chr8 12570350 12571130 - 781 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPS3AP34 NA 0.094 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-84O12.2 NA chr1 100586649 100587431 - 783 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-84O12.2 NA 0.012 70-80% NA NA Breast_cancer,Normal NA NA boxplot RP11-20I23.2 NA chr16 2516658 2517999 + 1342 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-20I23.2 NA 0.141 30-40% NA NA Breast_cancer,CRC,Normal,PAAD NA NA boxplot RP11-89N17.1 NA chr7 33725981 33728456 + 2476 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-89N17.1 NA 0.094 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot HMGN2P28 high mobility group nucleosomal binding domain 2 pseudogene 28 chr6 2341450 2341711 + 262 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HMGN2P28 NA 0.224 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-567M16.1 NA chr18 79576460 79589010 + 12551 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-567M16.1 NA 0.024 70-80% NA NA Breast_cancer,Normal NA NA boxplot RP11-77K12.3 NA chr16 75458252 75460017 - 1766 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-77K12.3 NA 0.129 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-118K6.3 NA chr10 3065424 3066001 - 578 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-118K6.3 NA 0.106 20-30% NA NA CRC,HCC,Normal NA NA boxplot LINC01121 long intergenic non-protein coding RNA 1121 chr2 45164870 45323295 - 158426 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01121 NA 0.024 50-60% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot RP11-12A2.1 NA chr6 139338018 139339580 + 1563 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-12A2.1 exo_circ_049729,exo_circ_004096,exo_circ_020864,exo_circ_019032,exo_circ_004097 0.094 40-50% Spleen 1.663578604 CRC,HCC,Normal,PAAD NA NA boxplot RP11-707O23.1 NA chr17 45592621 45593369 + 749 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-707O23.1 NA 0.094 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot OR4F13P olfactory receptor family 4 subfamily F member 13 pseudogene chr15 101842119 101850324 + 8206 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=OR4F13P NA 0.024 40-50% NA NA PAAD NA NA boxplot RP11-210L7.1 NA chr12 102513251 102513655 - 405 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-210L7.1 NA 0.012 70-80% NA NA Breast_cancer,PAAD NA NA boxplot RP1-213J1P__B.1 NA chr22 27676559 27714970 - 38412 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-213J1P__B.1 NA 0.024 10-20% Muscle 4.36914606 Breast_cancer,HCC NA NA boxplot MIR3911 microRNA 3911 chr9 127690098 127690840 - 743 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MIR3911 NA 0.082 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-156K23.3 NA chr13 48974967 48976867 - 1901 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-156K23.3 NA 0.588 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CRC(up) NA boxplot RP11-19G24.1 NA chr17 37140611 37141424 - 814 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-19G24.1 NA 0.059 20-30% Prostate 1.343638668 Breast_cancer,CRC,Normal,PAAD NA NA boxplot RP11-205M3.3 NA chr4 169917761 169975902 - 58142 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-205M3.3 NA 0.106 30-40% Kidney 3.413014389 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RPS4XP19 ribosomal protein S4X pseudogene 19 chr18 9020029 9020764 + 736 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPS4XP19 NA 0.012 80-90% NA NA NA NA NA boxplot AC000123.4 NA chr7 127350128 127351523 + 1396 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC000123.4 NA 0.094 10-20% NA NA HCC,Normal NA NA boxplot RP11-313P13.5 NA chr7 72924418 72925125 - 708 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-313P13.5 NA 0.012 80-90% NA NA Breast_cancer,CRC NA NA boxplot GSTA9P glutathione S-transferase alpha 9, pseudogene chr6 52939726 52957521 - 17796 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GSTA9P NA 0.012 80-90% NA NA HCC NA NA boxplot GOLGA8IP golgin A8 family member I, pseudogene chr15 22607540 22617854 - 10315 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GOLGA8IP NA 0.235 60-70% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-367N14.3 NA chr4 183516894 183517527 + 634 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-367N14.3 NA 0.059 10-20% NA NA HCC,Normal NA NA boxplot RP11-108L7.14 NA chr10 100967688 100968135 + 448 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-108L7.14 NA 0.012 10-20% NA NA Normal NA NA boxplot RP11-543B16.2 NA chr1 211207239 211207897 + 659 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-543B16.2 NA 0.494 70-80% NA NA CRC,HCC,Normal,PAAD NA NA boxplot SPG20-AS1 SPG20 antisense RNA 1 chr13 36346431 36369601 + 23171 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SPG20-AS1 NA 0.271 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot NCOA7-AS1 NCOA7 antisense RNA 1 chr6 125797856 125818858 - 21003 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NCOA7-AS1 NA 0.012 0-10% Stomach 3.815932383 PAAD NA NA boxplot RPS10L NA chr20 839447 839977 - 531 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPS10L NA 0.082 80-90% NA NA Breast_cancer,HCC,Normal NA NA boxplot LINC01284 long intergenic non-protein coding RNA 1284 chrX 51095844 51171400 - 75557 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01284 NA 0.012 10-20% NA NA Breast_cancer,Normal NA NA boxplot RP11-388C12.8 NA chr17 82745068 82745709 + 642 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-388C12.8 NA 0.035 80-90% NA NA Normal,PAAD NA NA boxplot BRWD1-IT1 BRWD1 intronic transcript 1 chr21 39217093 39219805 - 2713 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=BRWD1-IT1 NA 0.059 70-80% NA NA CRC,Normal,PAAD NA NA boxplot RPL23AP34 ribosomal protein L23a pseudogene 34 chr2 28308161 28308570 + 410 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL23AP34 NA 0.224 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot OR51F4P olfactory receptor family 51 subfamily F member 4 pseudogene chr11 4752046 4752944 - 899 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=OR51F4P NA 0.012 70-80% NA NA HCC NA NA boxplot RP11-99L13.2 NA chr14 44392531 44393716 - 1186 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-99L13.2 NA 0.012 20-30% Testis 2.81085541 Normal NA NA boxplot HERC2P9 hect domain and RLD 2 pseudogene 9 chr15 28589492 28685264 + 95773 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HERC2P9 NA 1 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down),CRC(up),PAAD(up) NA boxplot PIPSL PIP5K1A and PSMD4-like, pseudogene chr10 93958191 93961540 - 3350 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PIPSL NA 0.765 60-70% Testis 1.488040719 Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP5-874C20.6 NA chr6 28319660 28319852 - 193 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-874C20.6 NA 0.024 60-70% NA NA HCC NA NA boxplot RP1-69D17.3 NA chr6 129479615 129481410 - 1796 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-69D17.3 NA 0.059 40-50% Testis 1.096616319 CRC,HCC,Normal,PAAD NA NA boxplot RP11-255E6.5 NA chr3 113984037 113984655 + 619 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-255E6.5 NA 0.047 70-80% NA NA CRC,Normal,PAAD NA NA boxplot RP11-417N10.3 NA chr16 71833787 71835932 + 2146 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-417N10.3 NA 0.035 50-60% NA NA Breast_cancer,CRC NA NA boxplot CTB-40H15.4 NA chr5 14872332 14872713 + 382 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTB-40H15.4 NA 0.012 80-90% NA NA CRC NA NA boxplot RP11-1228E12.2 NA chr17 88641 118578 - 29938 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1228E12.2 NA 0.271 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-203B7.2 NA chr4 146052604 146056762 - 4159 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-203B7.2 NA 0.282 30-40% Testis 3.537936715 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CTC-505O3.2 NA chr5 115755644 115756286 + 643 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-505O3.2 NA 0.012 10-20% Liver 4.906892038 HCC NA NA boxplot TMSB4XP1 thymosin beta 4, X-linked pseudogene 1 chr1 42500205 42500339 - 135 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TMSB4XP1 NA 0.247 90-100% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-1H15.1 NA chr11 9958744 9959790 - 1047 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1H15.1 NA 0.094 60-70% NA NA CRC,Normal,PAAD NA NA boxplot LBX1-AS1 LBX1 antisense RNA 1 (head to head) chr10 101229594 101270148 + 40555 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LBX1-AS1 NA 0.024 60-70% NA NA Breast_cancer,PAAD NA NA boxplot RP11-10L12.2 NA chr4 102751401 102752641 + 1241 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-10L12.2 NA 0.024 40-50% NA NA CRC,Normal NA NA boxplot KB-208E9.1 NA chr22 23580880 23583859 - 2980 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KB-208E9.1 NA 0.024 40-50% NA NA CRC,Normal NA NA boxplot LA16c-321D4.2 NA chr16 2939714 2954276 - 14563 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LA16c-321D4.2 NA 0.071 70-80% NA NA Breast_cancer,CRC,Normal NA NA boxplot AC009262.2 NA chr7 34209526 34256343 + 46818 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC009262.2 NA 0.024 10-20% NA NA Breast_cancer,PAAD NA NA boxplot CSE1L-AS1 CSE1L antisense RNA 1 chr20 49040463 49046044 - 5582 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CSE1L-AS1 NA 0.012 80-90% NA NA NA NA NA boxplot CTC-558O19.1 NA chr5 94979151 94980893 + 1743 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-558O19.1 NA 0.012 50-60% Testis 4.906892038 CRC NA NA boxplot AC110299.5 NA chr2 241478316 241478993 + 678 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC110299.5 NA 0.059 70-80% NA NA CRC,HCC,PAAD NA NA boxplot RMDN2-AS1 RMDN2 antisense RNA 1 chr2 37949911 38067041 - 117131 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RMDN2-AS1 NA 0.106 80-90% NA NA CRC,HCC,Normal NA NA boxplot RP11-212E4.1 NA chr13 110265251 110266113 - 863 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-212E4.1 NA 0.012 60-70% NA NA NA NA NA boxplot RP11-395E19.2 NA chr9 66979132 66988373 + 9242 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-395E19.2 NA 0.012 60-70% NA NA CRC NA NA boxplot RP11-670E13.5 NA chr17 56888880 56891841 + 2962 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-670E13.5 NA 0.141 80-90% NA NA HCC,Normal NA NA boxplot AC018816.3 NA chr3 4814294 4887293 - 73000 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC018816.3 exo_circ_054320 0.694 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD PAAD(up) NA boxplot PGBD4P4 piggyBac transposable element derived 4 pseudogene 4 chr4 130494673 130495285 + 613 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PGBD4P4 NA 0.012 60-70% NA NA HCC NA NA boxplot RP11-541P9.3 NA chr5 163012265 163437326 - 425062 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-541P9.3 NA 0.188 40-50% Testis 2.558304964 CRC,HCC,Normal,PAAD NA NA boxplot DDX11L8 DEAD/H-box helicase 11 like 8 chr12 12310 13501 + 1192 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DDX11L8 NA 0.576 10-20% Testis 4.906892038 Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up) NA boxplot SMARCE1P1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 pseudogene 1 chr11 107403404 107404589 - 1186 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SMARCE1P1 NA 0.506 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-136L23.2 NA chr12 118066398 118066725 + 328 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-136L23.2 NA 0.024 90-100% NA NA HCC,Normal,PAAD NA NA boxplot RP11-576N17.3 NA chr4 83247179 83248206 + 1028 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-576N17.3 NA 0.012 90-100% Testis 1.323739031 Breast_cancer,CRC NA NA boxplot RP11-826N14.1 NA chr5 176040744 176042878 + 2135 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-826N14.1 NA 0.024 80-90% Testis 4.906892038 Breast_cancer,CRC NA NA boxplot RP11-473M20.16 NA chr16 3156736 3157483 - 748 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-473M20.16 NA 0.153 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP5-1053E7.3 NA chr1 28120449 28121321 - 873 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-1053E7.3 NA 0.035 90-100% Testis 4.135217078 Breast_cancer,CRC,Normal NA NA boxplot HCCAT5 hepatocellular carcinoma associated transcript 5 (non-protein coding) chr16 73092349 73093774 + 1426 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HCCAT5 NA 0.024 60-70% Artery 2.841550624 Breast_cancer,HCC,Normal NA NA boxplot B3GNTL1P1 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1 pseudogene 1 chr5 52889666 52889954 + 289 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=B3GNTL1P1 NA 0.012 70-80% NA NA NA NA NA boxplot PCAT14 prostate cancer associated transcript 14 (non-protein coding) chr22 23536881 23547797 + 10917 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PCAT14 NA 0.035 0-10% NA NA Breast_cancer,HCC,Normal NA NA boxplot RP11-798G7.5 NA chr17 45533963 45534710 + 748 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-798G7.5 NA 0.071 70-80% NA NA CRC,HCC,Normal,PAAD NA NA boxplot AC005488.11 NA chr7 72969814 72971727 + 1914 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC005488.11 NA 0.024 70-80% Testis 4.850928341 HCC NA NA boxplot CLUHP3 clustered mitochondria (cluA/CLU1) homolog pseudogene 3 chr16 31700590 31711986 + 11397 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CLUHP3 NA 0.788 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down),CRC(up),HCC(down) NA boxplot CNOT7P1 CCR4-NOT transcription complex subunit 7 pseudogene 1 chrX 69937166 69938017 - 852 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CNOT7P1 NA 0.224 90-100% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP5-998N21.7 NA chr1 143905487 143934776 + 29290 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-998N21.7 NA 0.024 50-60% NA NA Normal,PAAD NA NA boxplot ACVR2B-AS1 ACVR2B antisense RNA 1 chr3 38451027 38454820 - 3794 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ACVR2B-AS1 NA 0.118 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP1-283E3.8 NA chr1 1702736 1737688 - 34953 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-283E3.8 NA 0.929 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-269M20.3 NA chr5 50662859 50663266 - 408 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-269M20.3 NA 0.024 30-40% NA NA Normal NA NA boxplot RP11-219B17.3 NA chr15 60593027 60593460 + 434 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-219B17.3 NA 0.082 20-30% NA NA CRC,Normal,PAAD NA NA boxplot RP1-90J20.8 NA chr6 2989722 2999134 - 9413 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-90J20.8 NA 0.812 0-10% Testis 3.931576525 CRC,HCC,Normal,PAAD CHD(down) NA boxplot CTB-181H17.1 NA chr7 101960116 101961894 + 1779 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTB-181H17.1 NA 0.129 20-30% NA NA CRC,Normal,PAAD NA NA boxplot RP3-402G11.25 NA chr22 50191724 50192402 - 679 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-402G11.25 NA 0.082 80-90% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot AC011899.9 NA chr7 157854529 157866092 + 11564 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC011899.9 NA 0.918 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-64K7.1 NA chr3 132175402 132176711 + 1310 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-64K7.1 NA 0.012 70-80% Prostate 4.906892038 HCC NA NA boxplot RP11-26H16.4 NA chr1 21950679 21956871 - 6193 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-26H16.4 NA 0.012 90-100% NA NA Breast_cancer,PAAD NA NA boxplot ELMO1-AS1 ELMO1 antisense RNA 1 chr7 36997796 37013630 + 15835 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ELMO1-AS1 NA 0.082 60-70% NA NA CRC,Normal NA NA boxplot ATP8A2P2 ATPase, aminophospholipid transporter, class I, type 8A, member 2 pseudogene 2 chr13 32477274 32478841 + 1568 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ATP8A2P2 NA 0.012 90-100% NA NA CRC NA NA boxplot AC007359.6 NA chrY 22100814 22147484 - 46671 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC007359.6 NA 0.035 80-90% NA NA CRC,HCC,PAAD NA NA boxplot CTD-2031P19.5 NA chr5 55936143 55941727 + 5585 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2031P19.5 NA 0.424 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot ABCC13 ATP binding cassette subfamily C member 13 (pseudogene) chr21 14236206 14362754 + 126549 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ABCC13 exo_circ_017410,exo_circ_023239 0.953 0-10% Small Intestine 2.905656784 Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down),CRC(down) NA boxplot AC022431.3 NA chr5 56536583 56537826 - 1244 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC022431.3 NA 0.035 70-80% NA NA HCC,Normal NA NA boxplot KB-173C10.2 NA chr8 100381260 100414459 - 33200 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KB-173C10.2 NA 0.106 10-20% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot RP4-758J18.13 NA chr1 1409096 1410618 + 1523 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-758J18.13 NA 0.176 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot WBP1LP1 WW domain binding protein 1-like pseudogene 1 chr7 142778642 142779537 - 896 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=WBP1LP1 NA 0.012 90-100% NA NA Breast_cancer,Normal NA NA boxplot RP11-394B2.6 NA chr16 70747057 70747926 + 870 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-394B2.6 NA 0.035 80-90% Liver 2.233988923 Breast_cancer,CRC,HCC,Normal NA NA boxplot RP11-347C18.5 NA chr8 94884609 94885070 + 462 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-347C18.5 NA 0.094 30-40% NA NA CRC,Normal NA NA boxplot RP11-314A20.5 NA chr17 4731756 4732371 - 616 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-314A20.5 exo_circ_046137 0.071 70-80% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-567J20.3 NA chr8 48515852 48517089 - 1238 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-567J20.3 NA 0.118 30-40% Spleen 3.875944495 CRC,HCC,Normal,PAAD NA NA boxplot AP006222.2 NA chr1 257864 297502 - 39639 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AP006222.2 NA 0.812 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CRC(up),HCC(up),PAAD(up) NA boxplot POLR3DP1 polymerase (RNA) III (DNA directed) polypeptide D, 44kDa pseudogene 1 chr10 74654956 74656131 + 1176 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=POLR3DP1 NA 0.141 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-115J23.1 NA chr11 28702615 29063821 + 361207 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-115J23.1 NA 0.012 60-70% Testis 4.819101849 NA NA NA boxplot LINC00309 long intergenic non-protein coding RNA 309 chr2 64185078 64205485 - 20408 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00309 NA 0.012 40-50% Testis 4.906892038 Breast_cancer,HCC,Normal NA NA boxplot RP11-307P5.1 NA chr6 147660703 147953937 + 293235 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-307P5.1 NA 0.024 40-50% Testis 4.906892038 PAAD NA NA boxplot RP11-111F5.2 NA chr9 62266319 62266919 + 601 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-111F5.2 NA 0.141 70-80% NA NA CRC,HCC,Normal,PAAD NA NA boxplot AC097382.5 NA chr4 6995341 6998958 + 3618 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC097382.5 NA 0.024 80-90% NA NA Breast_cancer,CRC,Normal NA NA boxplot LINC01167 long intergenic non-protein coding RNA 1167 chr10 132961340 132962237 - 898 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01167 NA 0.024 70-80% NA NA Breast_cancer,Normal NA NA boxplot RP11-982M15.5 NA chr14 104690091 104691284 - 1194 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-982M15.5 NA 0.035 70-80% Nerve 2.307069452 Breast_cancer,CRC,HCC NA NA boxplot UNC93B7 unc-93 homolog B7 pseudogene (C. elegans) chr4 9493736 9498066 + 4331 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=UNC93B7 NA 0.012 90-100% NA NA Breast_cancer,HCC NA NA boxplot TSPEAR-AS1 TSPEAR antisense RNA 1 chr21 44506807 44516575 + 9769 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TSPEAR-AS1 NA 0.047 40-50% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot LINC01222 long intergenic non-protein coding RNA 1222 chr1 199006040 199021037 - 14998 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01222 NA 0.035 80-90% NA NA CRC,PAAD NA NA boxplot MAPK6PS3 mitogen-activated protein kinase 6 pseudogene 3 chr13 42068932 42071093 - 2162 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MAPK6PS3 NA 0.024 70-80% NA NA HCC,PAAD NA NA boxplot EEF1A1P22 eukaryotic translation elongation factor 1 alpha 1 pseudogene 22 chr15 52937139 52938518 - 1380 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=EEF1A1P22 NA 0.071 80-90% NA NA Breast_cancer,CHD,Normal NA NA boxplot AC007403.2 NA chr2 66904436 66971462 + 67027 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC007403.2 NA 0.047 70-80% Testis 2.160794946 CRC,Normal NA NA boxplot LINC00908 long intergenic non-protein coding RNA 908 chr18 76528655 76610968 + 82314 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00908 NA 0.012 60-70% NA NA Breast_cancer,HCC NA NA boxplot RP11-324C10.1 NA chr3 173153737 173336965 + 183229 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-324C10.1 NA 0.553 0-10% Testis 4.906892038 CRC,HCC,Normal,PAAD CHD(down),CRC(up),HCC(up) NA boxplot AC007192.6 NA chr19 18144522 18151691 - 7170 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC007192.6 NA 0.259 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-294N21.3 NA chr18 35144942 35145417 + 476 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-294N21.3 NA 0.024 40-50% NA NA CRC,Normal NA NA boxplot MIR219A2 microRNA 219a-2 chr9 128392007 128393510 - 1504 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MIR219A2 NA 0.012 90-100% NA NA Breast_cancer NA NA boxplot YWHAZP6 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta pseudogene 6 chr9 34922184 34922921 - 738 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=YWHAZP6 NA 0.882 30-40% Cervix 4.906892038 CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-435I10.5 NA chr16 28364700 28365333 + 634 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-435I10.5 NA 0.035 60-70% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot RP11-365H23.1 NA chr6 149112009 149112672 - 664 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-365H23.1 NA 0.047 40-50% NA NA CRC,Normal,PAAD NA NA boxplot RPS3AP35 ribosomal protein S3a pseudogene 35 chr8 12628476 12629256 - 781 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPS3AP35 NA 0.024 0-10% Skin 4.017276043 PAAD NA NA boxplot RP11-57A19.2 NA chr16 28284885 28292064 - 7180 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-57A19.2 NA 0.071 10-20% NA NA CRC,Normal,PAAD NA NA boxplot CH17-264B6.4 NA chr7 73037371 73049246 + 11876 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CH17-264B6.4 NA 0.753 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot FTOP1 fat mass and obesity associated pseudogene 1 chr2 42797225 42798712 - 1488 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FTOP1 NA 0.047 60-70% NA NA Breast_cancer,CHD,Normal,PAAD NA NA boxplot RP11-277A4.4 NA chr1 32052291 32073474 - 21184 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-277A4.4 NA 0.094 80-90% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot RP1-313L4.3 NA chr1 167820406 167821224 + 819 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-313L4.3 NA 0.024 80-90% Testis 1.455939493 CRC NA NA boxplot RP11-439A17.9 NA chr1 121090289 121097655 - 7367 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-439A17.9 NA 0.094 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot AC013474.4 NA chr2 126679622 126680420 + 799 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC013474.4 NA 0.106 50-60% NA NA CRC,Normal NA NA boxplot BNIP3P3 BCL2/adenovirus E1B 19kDa interacting protein 3 pseudogene 3 chr18 15247429 15247997 - 569 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=BNIP3P3 NA 0.024 70-80% NA NA PAAD NA NA boxplot AD000091.3 NA chr19 15611623 15611909 - 287 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AD000091.3 NA 0.271 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot GOT2P3 glutamic-oxaloacetic transaminase 2 pseudogene 3 chr12 9641723 9643011 + 1289 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GOT2P3 NA 0.094 60-70% Testis 3.31992045 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot SRD5A3-AS1 SRD5A3 antisense RNA 1 chr4 55363971 55395847 - 31877 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SRD5A3-AS1 NA 0.365 30-40% Testis 1.165636948 Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot IL9RP4 interleukin 9 receptor pseudogene 4 chr18 80140 88570 - 8431 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=IL9RP4 NA 0.012 60-70% Testis 4.906892038 Breast_cancer NA NA boxplot RP11-263K19.6 NA chr1 155211151 155213819 - 2669 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-263K19.6 NA 0.129 60-70% NA NA CRC,HCC,PAAD NA NA boxplot RP11-28G8.1 NA chr17 80801640 80805632 - 3993 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-28G8.1 NA 0.012 90-100% NA NA Breast_cancer NA NA boxplot RP11-613H2.2 NA chr8 27063996 27065278 - 1283 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-613H2.2 NA 0.012 90-100% NA NA NA NA NA boxplot CYCSP24 cytochrome c, somatic pseudogene 24 chr9 94038030 94038345 + 316 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CYCSP24 NA 0.071 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot FAM66E family with sequence similarity 66 member E chr8 7955014 8008755 + 53742 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FAM66E NA 0.141 70-80% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot RPS2P7 ribosomal protein S2 pseudogene 7 chr20 45640486 45641370 - 885 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPS2P7 NA 0.953 30-40% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up) NA boxplot CTD-2275D10.2 NA chr5 76510440 76510766 + 327 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2275D10.2 exo_circ_047434,exo_circ_027776 0.082 70-80% NA NA CRC,Normal NA NA boxplot PPIEL peptidylprolyl isomerase E-like pseudogene chr1 39531838 39558707 - 26870 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PPIEL NA 0.271 20-30% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-330H6.6 NA chr3 52217016 52219012 - 1997 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-330H6.6 NA 0.082 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-64J4.2 NA chr17 3278775 3386339 - 107565 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-64J4.2 NA 0.035 20-30% Testis 4.714276862 Normal NA NA boxplot RP11-145M9.5 NA chr3 179405448 179405944 + 497 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-145M9.5 NA 0.047 70-80% NA NA CRC,PAAD NA NA boxplot RP1-67K17.3 NA chr6 142748443 142753759 + 5317 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-67K17.3 NA 0.106 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot ARL6IP1P2 ADP ribosylation factor like GTPase 6 interacting protein 1 pseudogene 2 chr10 36995023 36995585 + 563 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ARL6IP1P2 NA 0.082 90-100% NA NA HCC,Normal NA NA boxplot RP11-165E7.1 NA chr16 5010909 5043999 + 33091 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-165E7.1 NA 0.365 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot LINC01498 long intergenic non-protein coding RNA 1498 chr12 108434130 108492585 - 58456 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01498 NA 0.035 80-90% NA NA Breast_cancer,CRC,Normal,PAAD NA NA boxplot RP11-464F9.20 NA chr10 73625996 73626790 + 795 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-464F9.20 NA 0.129 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-297D21.4 NA chr16 67481314 67505063 + 23750 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-297D21.4 NA 0.6 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down) NA boxplot HMGB1P35 high mobility group box 1 pseudogene 35 chr5 77146568 77147165 + 598 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HMGB1P35 NA 0.012 70-80% NA NA NA NA NA boxplot RP11-661A12.7 NA chr8 143579636 143580670 + 1035 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-661A12.7 NA 0.847 10-20% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down) NA boxplot RP11-570L15.2 NA chr2 143295586 143572105 - 276520 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-570L15.2 NA 0.035 40-50% NA NA CRC,Normal,PAAD NA NA boxplot RP11-43D4.3 NA chr12 104552073 104553447 + 1375 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-43D4.3 NA 0.141 40-50% NA NA CRC,Normal,PAAD NA NA boxplot LINC01055 long intergenic non-protein coding RNA 1055 chr13 45680184 45701184 - 21001 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01055 NA 0.024 40-50% Kidney 3.89095761 Breast_cancer,HCC NA NA boxplot RP11-48O20.5 NA chr1 159972548 159974064 - 1517 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-48O20.5 NA 0.012 50-60% NA NA Breast_cancer,CRC NA NA boxplot PFN1P11 profilin 1 pseudogene 11 chr10 102838011 102845473 - 7463 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PFN1P11 NA 0.024 90-100% NA NA Breast_cancer,CRC NA NA boxplot IGFBP7-AS1 IGFBP7 antisense RNA 1 chr4 57109762 57205510 + 95749 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=IGFBP7-AS1 NA 0.376 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-611O2.1 NA chr12 68828118 68828553 + 436 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-611O2.1 NA 0.059 70-80% NA NA CRC NA NA boxplot CTD-3023L14.2 NA chr8 8561391 8569688 + 8298 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-3023L14.2 NA 0.012 90-100% Testis 4.652124454 Breast_cancer NA NA boxplot RP11-477D19.2 NA chr6 155253139 155256724 - 3586 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-477D19.2 NA 0.365 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP4-539M6.22 NA chr22 30435544 30436247 + 704 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-539M6.22 NA 0.024 70-80% Testis 1.449105701 Breast_cancer,CRC,Normal NA NA boxplot RP11-815J21.3 NA chr15 85621264 85627689 - 6426 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-815J21.3 NA 0.012 80-90% Testis 3.203120363 PAAD NA NA boxplot USP12PY ubiquitin specific peptidase 12 pseudogene, Y-linked chrY 3682805 3683868 + 1064 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=USP12PY NA 0.424 60-70% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot TRIM53AP tripartite motif containing 53A, pseudogene chr11 89993536 89999741 - 6206 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TRIM53AP NA 0.012 20-30% Testis 4.906892038 PAAD NA NA boxplot RP11-715J22.1 NA chr16 2332313 2332732 - 420 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-715J22.1 NA 0.035 60-70% NA NA CRC,PAAD NA NA boxplot HMGN2P46 high mobility group nucleosomal binding domain 2 pseudogene 46 chr15 45511136 45586290 + 75155 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HMGN2P46 NA 0.188 30-40% Prostate 1.716215293 Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-172C16.4 NA chr11 114583253 114584692 + 1440 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-172C16.4 NA 0.012 90-100% Colon 1.237724619 Breast_cancer,CRC NA NA boxplot RP11-733C7.1 NA chr4 138277115 138281784 - 4670 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-733C7.1 NA 0.047 60-70% Testis 4.906892038 CRC,HCC,Normal NA NA boxplot ARHGEF34P Rho guanine nucleotide exchange factor 34, pseudogene chr7 144272445 144286966 - 14522 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ARHGEF34P NA 0.894 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up),CRC(up),HCC(up),PAAD(up) NA boxplot AQP7P2 aquaporin 7 pseudogene 2 chr9 64621560 64637586 - 16027 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AQP7P2 NA 0.247 60-70% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-616L12.1 NA chr12 55009746 55014247 + 4502 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-616L12.1 NA 0.212 20-30% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot RP11-2E17.2 NA chr15 80165923 80166980 + 1058 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-2E17.2 NA 0.012 90-100% NA NA Breast_cancer NA NA boxplot RP11-195M16.3 NA chr1 109895973 109897861 + 1889 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-195M16.3 NA 0.541 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RPS26P28 ribosomal protein S26 pseudogene 28 chr5 16902294 16902641 - 348 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPS26P28 NA 0.106 70-80% NA NA CHD,HCC,Normal,PAAD NA NA boxplot CTD-2587H19.3 NA chr19 54438010 54438346 - 337 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2587H19.3 NA 0.047 80-90% NA NA CRC,Normal NA NA boxplot TPI1P2 triosephosphate isomerase 1 pseudogene 2 chr7 129055223 129057239 + 2017 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TPI1P2 NA 0.212 30-40% Testis 1.891195252 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-731N10.1 NA chr8 82862779 82958696 - 95918 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-731N10.1 NA 0.012 50-60% NA NA Breast_cancer,HCC NA NA boxplot RP11-539G18.3 NA chr4 39639140 39666644 + 27505 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-539G18.3 NA 0.082 80-90% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-424C20.2 NA chr12 20551590 20553012 + 1423 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-424C20.2 exo_circ_016848,exo_circ_015349,exo_circ_039835,exo_circ_028417,exo_circ_056581,exo_circ_056582,exo_circ_036490,exo_circ_034119,exo_circ_034120,exo_circ_034121,exo_circ_045446,exo_circ_047732,exo_circ_056583,exo_circ_022663,exo_circ_028418,exo_circ_021081,exo_circ_052823 0.694 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD PAAD(up) NA boxplot AC000095.12 NA chr22 18998274 19014786 + 16513 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC000095.12 NA 0.035 50-60% NA NA HCC,PAAD NA NA boxplot LINC00535 long intergenic non-protein coding RNA 535 chr8 93213302 93700433 - 487132 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00535 NA 0.035 70-80% Testis 2.401726314 Breast_cancer,Normal NA NA boxplot IPO8P1 importin 8 pseudogene 1 chr1 210859177 210862285 - 3109 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=IPO8P1 NA 0.176 60-70% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot LINC00645 long intergenic non-protein coding RNA 645 chr14 27612588 27639636 + 27049 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00645 NA 0.024 60-70% Kidney 3.683452316 HCC NA NA boxplot RP11-337N6.1 NA chr2 177306373 177310572 + 4200 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-337N6.1 NA 0.012 20-30% NA NA NA NA NA boxplot RP11-448G15.1 NA chr4 10006482 10009725 + 3244 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-448G15.1 NA 0.012 60-70% NA NA HCC,PAAD NA NA boxplot OR7E122P olfactory receptor family 7 subfamily E member 122 pseudogene chr3 8688143 8689159 + 1017 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=OR7E122P NA 0.012 70-80% Testis 4.887438673 Breast_cancer NA NA boxplot RP5-955M13.4 NA chr20 50999370 51010019 + 10650 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-955M13.4 NA 0.059 60-70% NA NA Breast_cancer,HCC,Normal NA NA boxplot RP11-426C22.7 NA chr16 29225594 29226348 - 755 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-426C22.7 NA 0.165 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot Z82214.2 NA chr22 43232141 43239010 + 6870 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=Z82214.2 NA 0.024 70-80% Spleen 3.234085706 Breast_cancer,HCC,PAAD NA NA boxplot TPM3P9 tropomyosin 3 pseudogene 9 chr19 53431984 53444670 + 12687 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TPM3P9 NA 0.976 0-10% NA NA CHD,CRC,HCC,Normal,PAAD CHD(down),PAAD(up) NA boxplot LARP1P1 La ribonucleoprotein domain family member 1 pseudogene 1 chr6 26164072 26164363 + 292 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LARP1P1 NA 0.024 90-100% NA NA CRC,Normal NA NA boxplot YWHAZP2 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta pseudogene 2 chr2 126557435 126558162 - 728 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=YWHAZP2 NA 1 0-10% NA NA CHD,CRC,HCC,Normal,PAAD CHD(down),HCC(down) NA boxplot RP11-588K22.2 NA chr4 155734448 155737062 + 2615 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-588K22.2 NA 0.882 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down) NA boxplot USP12-AS2 USP12 antisense RNA 2 (head to head) chr13 27172259 27182998 + 10740 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=USP12-AS2 NA 0.353 50-60% Testis 2.915799971 CRC,HCC,Normal,PAAD NA NA boxplot RP11-545E17.3 NA chr9 128724445 128733194 + 8750 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-545E17.3 NA 0.859 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-749I16.3 NA chr17 40113215 40115442 - 2228 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-749I16.3 NA 0.035 70-80% NA NA Breast_cancer,CRC,PAAD NA NA boxplot OR7M1P olfactory receptor family 7 subfamily M member 1 pseudogene chr10 133481238 133481770 + 533 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=OR7M1P NA 0.153 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-64C12.3 NA chr18 12201982 12223539 + 21558 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-64C12.3 NA 0.012 90-100% Testis 3.598153405 Breast_cancer,HCC,Normal,PAAD NA NA boxplot RPL15P2 ribosomal protein L15 pseudogene 2 chr14 94800849 94801463 - 615 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL15P2 NA 0.812 60-70% Breast 4.169099143 CHD,CRC,HCC,Normal,PAAD NA NA boxplot UNQ6494 uncharacterized LOC100129066 chr9 89639814 89719759 + 79946 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=UNQ6494 NA 0.012 80-90% NA NA Breast_cancer,HCC NA NA boxplot RP4-647J21.1 NA chr7 44958999 44960909 - 1911 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-647J21.1 NA 0.918 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot AC002310.12 NA chr16 30534752 30537144 + 2393 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC002310.12 NA 0.671 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),PAAD(up) NA boxplot RPL7L1P8 ribosomal protein L7 like 1 pseudogene 8 chr3 182610674 182611414 + 741 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL7L1P8 NA 0.565 50-60% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP1-10C16.1 NA chr1 168763365 168774490 - 11126 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-10C16.1 NA 0.024 60-70% NA NA Breast_cancer,HCC,PAAD NA NA boxplot AF127936.7 NA chr21 14819699 14918552 - 98854 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AF127936.7 NA 0.859 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot TXNP6 thioredoxin pseudogene 6 chr4 76958860 76959169 - 310 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TXNP6 exo_circ_042213 0.024 90-100% NA NA HCC NA NA boxplot RP11-930O11.3 NA chr14 56305838 56306394 + 557 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-930O11.3 NA 0.153 50-60% NA NA CRC,HCC,Normal NA NA boxplot CTD-3137H5.5 NA chr19 18448275 18448802 + 528 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-3137H5.5 NA 0.012 10-20% NA NA PAAD NA NA boxplot CALCP calcitonin pseudogene chr11 14907518 14907986 + 469 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CALCP NA 0.012 10-20% NA NA Normal,PAAD NA NA boxplot CTC-244M17.1 NA chr19 37963853 37964790 + 938 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-244M17.1 NA 0.035 80-90% NA NA CRC NA NA boxplot RP5-1139B12.4 NA chr1 228295911 228302998 - 7088 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-1139B12.4 NA 0.024 60-70% NA NA Normal NA NA boxplot RP11-33A14.1 NA chr3 178202050 178385417 - 183368 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-33A14.1 NA 0.106 40-50% NA NA Breast_cancer,CRC,HCC,PAAD NA NA boxplot RP11-12A20.13 NA chr9 67721884 67722094 - 211 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-12A20.13 NA 0.024 10-20% NA NA PAAD NA NA boxplot RP11-432J9.6 NA chr10 70939053 70955641 + 16589 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-432J9.6 NA 0.047 70-80% Testis 4.906892038 Breast_cancer,HCC,Normal NA NA boxplot LINC00571 long intergenic non-protein coding RNA 571 chr13 38050817 38143232 - 92416 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00571 NA 0.718 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(down),PAAD(down) NA boxplot RP1-122P22.2 NA chr20 19757708 19809675 + 51968 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-122P22.2 exo_circ_029014,exo_circ_020526,exo_circ_029015,exo_circ_046395,exo_circ_025557,exo_circ_017366,exo_circ_041105,exo_circ_034805,exo_circ_057961,exo_circ_057962,exo_circ_023195,exo_circ_017367,exo_circ_029467,exo_circ_047948,exo_circ_041340,exo_circ_040619,exo_circ_024365,exo_circ_011469,exo_circ_057963,exo_circ_036067,exo_circ_040620,exo_circ_057964,exo_circ_052201,exo_circ_041821,exo_circ_021285,exo_circ_040621,exo_circ_029865,exo_circ_035465,exo_circ_021286,exo_circ_012808,exo_circ_029016,exo_circ_057965,exo_circ_040622,exo_circ_047034,exo_circ_052202,exo_circ_020527,exo_circ_046396,exo_circ_023196,exo_circ_042921,exo_circ_057969,exo_circ_023197 0.8 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(up),PAAD(up) NA boxplot RP11-9G1.3 NA chr4 133075311 133149116 - 73806 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-9G1.3 NA 0.047 10-20% Brain 2.136936627 HCC,Normal,PAAD NA NA boxplot IDSP1 iduronate 2-sulfatase pseudogene 1 chrX 149525001 149526043 + 1043 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=IDSP1 NA 0.647 60-70% Cervix 4.906892038 Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-261P13.5 NA chr13 20712431 20714146 + 1716 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-261P13.5 NA 0.012 50-60% NA NA Breast_cancer NA NA boxplot RP11-732A19.1 NA chr11 6685891 6686369 - 479 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-732A19.1 NA 0.129 30-40% Spleen 1.324451585 CRC,HCC,Normal,PAAD NA NA boxplot RP11-445O16.2 NA chrX 57068914 57069685 - 772 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-445O16.2 NA 0.012 90-100% NA NA Normal NA NA boxplot RP11-407N8.6 NA chr12 50934942 50935464 - 523 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-407N8.6 NA 0.024 50-60% NA NA CRC NA NA boxplot GS1-124K5.3 NA chr7 66491049 66493566 - 2518 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GS1-124K5.3 NA 0.212 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot ULK4P3 ULK4 pseudogene 3 chr15 30103720 30131757 + 28038 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ULK4P3 NA 0.259 60-70% Testis 1.133562845 CHD,CRC,HCC,Normal,PAAD NA NA boxplot RPL22P5 ribosomal protein L22 pseudogene 5 chr1 143929994 143930382 - 389 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL22P5 NA 0.071 70-80% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-542H15.1 NA chr2 16541690 16545695 - 4006 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-542H15.1 exo_circ_053567 0.024 10-20% NA NA CRC,Normal NA NA boxplot RP11-1137G4.3 NA chr19 6953211 6954904 + 1694 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1137G4.3 NA 0.012 20-30% Testis 4.513638745 HCC NA NA boxplot CEACAMP11 carcinoembryonic antigen-related cell adhesion molecule pseudogene 11 chr19 43278933 43284318 - 5386 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CEACAMP11 NA 0.012 40-50% Brain 4.906892038 Breast_cancer NA NA boxplot REV3L-IT1 REV3L intronic transcript 1 chr6 111360641 111361607 - 967 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=REV3L-IT1 NA 0.035 40-50% Uterus 4.906892038 CRC,PAAD NA NA boxplot RP11-569A2.2 NA chr6 110706362 110706882 - 521 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-569A2.2 exo_circ_044372 0.024 90-100% NA NA CRC NA NA boxplot FLJ16779 uncharacterized LOC100192386 chr20 63253978 63261615 + 7638 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FLJ16779 NA 0.082 30-40% NA NA Breast_cancer,CRC,Normal,PAAD NA NA boxplot RP11-1038A11.1 NA chr12 5388589 5406651 + 18063 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1038A11.1 NA 0.012 80-90% NA NA Breast_cancer,HCC NA NA boxplot CTC-499B15.6 NA chr19 11725961 11730783 - 4823 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-499B15.6 NA 0.012 90-100% NA NA Breast_cancer NA NA boxplot NOP56P3 NOP56 ribonucleoprotein pseudogene 3 chr12 79558782 79559166 + 385 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NOP56P3 NA 0.012 20-30% NA NA Breast_cancer,Normal NA NA boxplot RP11-178C3.2 NA chr17 59964832 59996972 + 32141 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-178C3.2 NA 0.459 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-386J22.3 NA chr9 70310875 70312120 + 1246 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-386J22.3 NA 0.106 20-30% NA NA CRC,Normal,PAAD NA NA boxplot RP11-103J8.1 NA chr20 10672928 10994924 + 321997 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-103J8.1 exo_circ_046385 0.059 20-30% Testis 2.421833111 Breast_cancer,CRC,Normal NA NA boxplot FAR2P4 fatty acyl-CoA reductase 2 pseudogene 4 chr2 131279290 131309068 + 29779 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FAR2P4 NA 0.035 50-60% NA NA Breast_cancer,PAAD NA NA boxplot VDAC1P5 voltage-dependent anion channel 1 pseudogene 5 chr12 54802746 54803589 - 844 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=VDAC1P5 NA 0.012 70-80% NA NA CRC NA NA boxplot RP11-101K23.1 NA chr12 46004038 46004685 - 648 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-101K23.1 exo_circ_041700 0.012 90-100% Testis 4.906892038 Breast_cancer,Normal NA NA boxplot CTD-2119L1.1 NA chr11 36696317 36697867 + 1551 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2119L1.1 exo_circ_046968 0.012 70-80% Brain 4.906892038 Breast_cancer,CRC NA NA boxplot CTB-35F21.4 NA chr5 139848290 139856389 + 8100 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTB-35F21.4 NA 0.024 80-90% NA NA Breast_cancer,HCC,Normal NA NA boxplot AP000487.6 NA chr11 70282367 70363368 - 81002 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AP000487.6 NA 0.071 30-40% NA NA Breast_cancer,Normal NA NA boxplot RP11-174G17.3 NA chr1 18109389 18115861 + 6473 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-174G17.3 NA 0.012 10-20% NA NA Breast_cancer,CRC NA NA boxplot RP4-545C24.5 NA chr7 144434826 144435314 - 489 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-545C24.5 NA 0.012 90-100% NA NA Normal NA NA boxplot TCEA1P4 transcription elongation factor A (SII), 1 pseudogene 4 chr9 32979560 32980403 - 844 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TCEA1P4 NA 0.2 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot KRT8P1 keratin 8 pseudogene 1 chr14 38727275 38728481 + 1207 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KRT8P1 NA 0.024 40-50% Brain 4.061289958 Breast_cancer,Normal NA NA boxplot RP11-1348G14.5 NA chr16 28820570 28822033 - 1464 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1348G14.5 NA 0.059 30-40% NA NA Breast_cancer,CRC,Normal NA NA boxplot RP11-566F5.2 NA chr10 109661814 109662050 + 237 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-566F5.2 NA 0.094 90-100% NA NA HCC,Normal NA NA boxplot RP11-386I8.6 NA chr12 133030389 133037222 - 6834 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-386I8.6 NA 0.012 80-90% Testis 4.583285235 NA NA NA boxplot RP11-579D7.2 NA chr12 48766194 48767323 + 1130 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-579D7.2 NA 0.059 80-90% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot ZNF561-AS1 ZNF561 antisense RNA 1 (head to head) chr19 9621291 9645896 + 24606 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ZNF561-AS1 NA 0.8 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP5-1061H20.5 NA chr1 229223461 229227562 - 4102 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-1061H20.5 NA 0.012 10-20% Testis 4.906892038 PAAD NA NA boxplot AC012363.13 NA chr2 120319007 120326298 + 7292 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC012363.13 NA 0.012 90-100% NA NA Breast_cancer,CRC NA NA boxplot BMS1P15 BMS1, ribosome biogenesis factor pseudogene 15 chr15 20153776 20160826 + 7051 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=BMS1P15 NA 0.165 50-60% NA NA HCC,Normal,PAAD NA NA boxplot AL355480.1 NA chr1 45581219 45581321 - 103 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AL355480.1 NA 0.024 0-10% NA NA HCC,Normal NA NA boxplot AP000688.15 NA chr21 36082859 36090414 + 7556 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AP000688.15 NA 0.012 90-100% NA NA CRC NA NA boxplot RP11-398A8.1 NA chr3 72086888 72087725 + 838 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-398A8.1 NA 0.012 70-80% NA NA Breast_cancer,Normal NA NA boxplot CTD-2110K23.1 NA chr5 83201229 83202141 + 913 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2110K23.1 exo_circ_054996 0.059 70-80% NA NA CRC,Normal,PAAD NA NA boxplot CSAG2 CSAG family, member 2 chrX 152708261 152714549 - 6289 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CSAG2 NA 0.082 50-60% Testis 4.906892038 Breast_cancer,CHD,CRC,HCC NA NA boxplot RP11-59K5.1 NA chr11 56690465 56690723 + 259 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-59K5.1 NA 0.906 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(down),PAAD(down) NA boxplot RP11-12G12.7 NA chr13 100086031 100088848 - 2818 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-12G12.7 NA 0.482 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot ARIH2P1 ariadne RBR E3 ubiquitin protein ligase 2 pseudogene 1 chr18 28651732 28653208 + 1477 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ARIH2P1 NA 0.047 80-90% NA NA Breast_cancer,HCC,Normal NA NA boxplot RP11-154P18.2 NA chr9 66253424 66254464 - 1041 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-154P18.2 NA 0.012 90-100% NA NA Breast_cancer,HCC NA NA boxplot ELFN1-AS1 ELFN1 antisense RNA 1 chr7 1738630 1742291 - 3662 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ELFN1-AS1 NA 0.141 20-30% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot SFTA1P surfactant associated 1, pseudogene chr10 10784437 10794980 - 10544 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SFTA1P NA 0.059 40-50% Lung 3.83939739 Normal,PAAD NA NA boxplot RP11-250H24.2 NA chr9 64462819 64463196 + 378 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-250H24.2 NA 0.012 90-100% Testis 1.544625212 CRC NA NA boxplot RP11-465I4.3 NA chr18 69469517 69471736 + 2220 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-465I4.3 NA 0.047 40-50% Testis 4.851520218 Breast_cancer,HCC,Normal NA NA boxplot RPL23AP4 ribosomal protein L23a pseudogene 4 chr21 46690764 46691226 + 463 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL23AP4 NA 0.247 10-20% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-1167A19.6 NA chr11 65983679 65984331 - 653 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1167A19.6 NA 0.024 80-90% NA NA Breast_cancer,CRC NA NA boxplot URAHP urate (hydroxyiso-) hydrolase, pseudogene chr16 90039761 90047773 - 8013 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=URAHP NA 0.129 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-431J24.2 NA chrX 16152941 16170869 - 17929 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-431J24.2 NA 0.047 60-70% Pancreas 1.999903024 Breast_cancer,CRC,HCC,PAAD NA NA boxplot A2MP1 alpha-2-macroglobulin pseudogene 1 chr12 9228533 9275817 - 47285 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=A2MP1 NA 0.259 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot FLJ33360 FLJ33360 protein chr5 6310441 6339884 - 29444 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FLJ33360 exo_circ_038893,exo_circ_027761 0.224 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-287D1.2 NA chr2 74196698 74198560 - 1863 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-287D1.2 NA 0.035 60-70% NA NA Breast_cancer,CRC,Normal NA NA boxplot RP11-540O11.1 NA chr15 40906811 40910337 + 3527 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-540O11.1 NA 0.106 70-80% Testis 1.054288548 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-589M4.1 NA chr14 52775237 52777740 + 2504 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-589M4.1 exo_circ_002883 0.6 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-274B21.3 NA chr7 128653969 128654722 + 754 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-274B21.3 NA 0.588 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-154H23.3 NA chr3 71584943 71587409 + 2467 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-154H23.3 NA 0.141 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-452C8.1 NA chr4 79663761 79696837 + 33077 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-452C8.1 NA 0.306 20-30% Prostate 3.031291682 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AL773572.7 NA chr21 41176322 41186788 - 10467 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AL773572.7 NA 0.071 20-30% NA NA HCC,Normal,PAAD NA NA boxplot RP11-314D7.1 NA chr12 73115957 73143858 - 27902 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-314D7.1 NA 0.188 10-20% Testis 4.906892038 CRC,HCC,Normal,PAAD NA NA boxplot AC008937.2 NA chr5 56842016 56862164 - 20149 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC008937.2 NA 0.224 80-90% Testis 4.224910429 CRC,HCC,Normal,PAAD NA NA boxplot RP11-266J6.2 NA chr3 9812762 9813097 - 336 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-266J6.2 NA 0.141 70-80% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-498M5.2 NA chr4 101976894 102036903 - 60010 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-498M5.2 NA 0.024 90-100% Testis 4.265811022 Normal NA NA boxplot ODF2-AS1 ODF2 antisense RNA 1 chr9 128468957 128473012 - 4056 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ODF2-AS1 NA 0.318 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot FOXO3B forkhead box O3B pseudogene chr17 18670946 18672873 - 1928 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FOXO3B NA 1 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up) NA boxplot RP11-89N17.2 NA chr7 33730292 33732064 - 1773 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-89N17.2 NA 0.012 0-10% NA NA HCC,PAAD NA NA boxplot RP11-946L16.1 NA chr12 29143196 29148675 - 5480 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-946L16.1 NA 0.012 90-100% Testis 1.305301728 CRC,Normal NA NA boxplot CTA-313A17.3 NA chr7 102337316 102339115 + 1800 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTA-313A17.3 NA 0.235 80-90% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CTD-2301A4.3 NA chr5 177264766 177265241 + 476 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2301A4.3 NA 0.094 30-40% NA NA CRC,Normal,PAAD NA NA boxplot RP11-162J8.3 NA chr6 149027700 149032573 - 4874 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-162J8.3 NA 0.059 80-90% Adrenal Gland 3.992840037 CRC,Normal NA NA boxplot RP11-192H23.5 NA chr17 28573117 28574243 + 1127 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-192H23.5 NA 0.165 60-70% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot AC092620.3 NA chr2 138604510 138613167 + 8658 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC092620.3 exo_circ_048490 0.059 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-196G18.3 NA chr1 149785659 149793020 - 7362 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-196G18.3 NA 0.224 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-374M1.7 NA chr9 61861853 61862567 - 715 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-374M1.7 NA 0.012 70-80% NA NA HCC,PAAD NA NA boxplot CTB-129P6.7 NA chr19 44909375 44914968 + 5594 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTB-129P6.7 NA 0.012 70-80% NA NA Breast_cancer NA NA boxplot APOBEC3B-AS1 APOBEC3B antisense RNA 1 chr22 38991559 38998209 - 6651 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=APOBEC3B-AS1 NA 0.224 30-40% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-374A4.1 NA chr5 21323873 21341375 - 17503 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-374A4.1 NA 0.024 90-100% NA NA Breast_cancer,Normal NA NA boxplot SLED1 proteoglycan 3 pseudogene chr4 184798296 184799046 - 751 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SLED1 NA 0.188 40-50% NA NA Breast_cancer,CRC,Normal,PAAD NA NA boxplot RP11-734K23.9 NA chr2 97281904 97291780 + 9877 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-734K23.9 NA 0.506 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CRC(up),PAAD(up) NA boxplot RP11-253E3.1 NA chr12 3071532 3072145 - 614 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-253E3.1 NA 0.282 90-100% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-467I17.1 NA chr16 79505603 79516293 + 10691 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-467I17.1 NA 0.012 90-100% Adipose 1.839763128 HCC NA NA boxplot RP11-862L9.3 NA chr18 76974690 76984162 + 9473 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-862L9.3 NA 0.165 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CTC-459F4.1 NA chr19 27757184 27760849 - 3666 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-459F4.1 NA 0.188 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CTD-3022L24.1 NA chr17 69433084 69435533 + 2450 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-3022L24.1 NA 0.071 10-20% NA NA CRC,Normal,PAAD NA NA boxplot CYP4F10P cytochrome P450 family 4 subfamily F member 10, pseudogene chr19 15664106 15669826 + 5721 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CYP4F10P NA 0.012 60-70% Liver 4.906892038 Breast_cancer NA NA boxplot RP11-490B18.6 NA chr16 75572185 75572685 - 501 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-490B18.6 NA 0.059 70-80% NA NA Breast_cancer,CRC,Normal NA NA boxplot AC098973.2 NA chr3 27802762 27891301 + 88540 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC098973.2 NA 0.094 40-50% Testis 4.872451359 Breast_cancer,CRC,HCC,Normal NA NA boxplot LCMT1-AS2 LCMT1 antisense RNA 2 chr16 25140577 25149032 - 8456 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LCMT1-AS2 NA 0.129 10-20% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot RP11-12A20.4 NA chr9 67722083 67722683 + 601 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-12A20.4 NA 0.024 60-70% NA NA PAAD NA NA boxplot HNRNPA1P54 heterogeneous nuclear ribonucleoprotein A1 pseudogene 54 chr1 179447602 179457315 - 9714 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HNRNPA1P54 NA 0.212 90-100% Testis 2.951268387 Breast_cancer,CHD,HCC,Normal,PAAD NA NA boxplot CH507-236L23.2 NA chr21 7129103 7130287 + 1185 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CH507-236L23.2 NA 0.082 80-90% NA NA CRC,HCC,PAAD NA NA boxplot RP11-466F5.3 NA chr1 165671256 165671725 + 470 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-466F5.3 NA 0.012 20-30% NA NA CRC,PAAD NA NA boxplot RP11-295B17.6 NA chr13 98553243 98553780 + 538 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-295B17.6 NA 0.012 90-100% NA NA Breast_cancer,HCC NA NA boxplot RP13-487P22.1 NA chr15 25345633 25347235 - 1603 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP13-487P22.1 NA 0.071 50-60% NA NA CRC,Normal NA NA boxplot AC110769.3 NA chr2 113979909 113983258 + 3350 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC110769.3 NA 0.071 40-50% Testis 4.008324565 Breast_cancer,CRC,HCC,PAAD NA NA boxplot PLCB1-IT1 PLCB1 intronic transcript 1 chr20 8248704 8256918 + 8215 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PLCB1-IT1 NA 0.059 50-60% Testis 4.906892038 Breast_cancer,CRC,Normal NA NA boxplot RP5-1024G6.2 NA chr1 53209783 53213775 - 3993 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-1024G6.2 NA 0.576 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot ZNF101P2 zinc finger protein 101 pseudogene 2 chr1 192993449 192994677 - 1229 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ZNF101P2 NA 0.165 40-50% NA NA CRC,Normal,PAAD NA NA boxplot LINC01096 long intergenic non-protein coding RNA 1096 chr4 13546075 13547801 - 1727 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01096 NA 0.024 30-40% NA NA PAAD NA NA boxplot RP1-315G1.3 NA chrX 123959233 123961341 - 2109 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-315G1.3 NA 0.129 50-60% NA NA HCC,Normal,PAAD NA NA boxplot MIR4435-2HG MIR4435-2 host gene chr2 111196350 111495100 - 298751 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MIR4435-2HG exo_circ_020642,exo_circ_048448,exo_circ_053464 0.929 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RPS3AP49 ribosomal protein S3a pseudogene 49 chr18 60149576 60150365 + 790 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPS3AP49 NA 0.094 90-100% NA NA CRC,Normal,PAAD NA NA boxplot RP11-876N24.4 NA chr16 10940719 10943021 + 2303 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-876N24.4 NA 0.729 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot MTCO3P19 MT-CO3 pseudogene 19 chrX 102799563 102799883 + 321 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MTCO3P19 NA 0.035 30-40% NA NA Normal,PAAD NA NA boxplot RP5-1003J2.4 NA chr1 110256754 110256930 + 177 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-1003J2.4 NA 0.012 80-90% NA NA NA NA NA boxplot CTD-2152M20.2 NA chr5 32103445 32121941 - 18497 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2152M20.2 NA 0.188 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-506B6.6 NA chr6 112236093 112307009 + 70917 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-506B6.6 NA 0.012 80-90% Testis 3.773993442 Normal NA NA boxplot RP11-685G9.4 NA chr15 76343642 76344365 + 724 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-685G9.4 NA 0.012 90-100% Testis 2.201308024 NA NA NA boxplot RPL12P13 ribosomal protein L12 pseudogene 13 chr1 26980165 26980975 + 811 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL12P13 NA 0.094 90-100% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-544A12.8 NA chr9 131189910 131194205 - 4296 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-544A12.8 NA 0.012 90-100% NA NA Normal,PAAD NA NA boxplot AC108488.4 NA chr2 3531813 3536873 - 5061 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC108488.4 NA 0.882 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-378A13.1 NA chr2 218255319 218257366 + 2048 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-378A13.1 NA 0.765 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down) NA boxplot FAM74A6 family with sequence similarity 74 member A6 chr9 60929774 60936746 + 6973 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FAM74A6 NA 0.047 60-70% Fallopian Tube 4.906892038 HCC,Normal NA NA boxplot RP11-15A1.7 NA chr19 43996896 44002836 - 5941 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-15A1.7 NA 0.447 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot RP11-113K21.1 NA chr11 83040806 83041403 - 598 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-113K21.1 NA 0.082 70-80% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot ANKRD20A8P ankyrin repeat domain 20 family member A8, pseudogene chr2 94811046 94857282 - 46237 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ANKRD20A8P NA 0.188 60-70% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot CSDAP1 NA chr16 31568386 31569475 - 1090 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CSDAP1 NA 0.929 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-152C15.1 NA chr8 70103798 70104179 - 382 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-152C15.1 NA 0.012 90-100% Testis 4.906892038 NA NA NA boxplot RP13-884E18.4 NA chr4 137690477 137734977 - 44501 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP13-884E18.4 NA 0.024 60-70% Testis 2.77604771 HCC,Normal NA NA boxplot RP11-464D20.6 NA chr17 62549726 62552121 + 2396 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-464D20.6 NA 0.047 30-40% NA NA Breast_cancer,CRC,PAAD NA NA boxplot AC133644.2 NA chr2 87439523 87459044 - 19522 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC133644.2 NA 0.776 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD PAAD(up) NA boxplot RP11-92K2.2 NA chr1 192716183 192716648 + 466 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-92K2.2 NA 0.929 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(down),PAAD(down) NA boxplot RP11-152D8.1 NA chr2 49202126 49451896 - 249771 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-152D8.1 NA 0.024 70-80% NA NA Breast_cancer,Normal NA NA boxplot RPS20P23 ribosomal protein S20 pseudogene 23 chr8 100776512 100776865 - 354 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPS20P23 NA 0.012 90-100% NA NA Breast_cancer,Normal NA NA boxplot SUMO2P3 SUMO2 pseudogene 3 chr7 55732144 55732431 + 288 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SUMO2P3 NA 0.388 90-100% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot CD8BP CD8b molecule pseudogene chr2 106487427 106506940 + 19514 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CD8BP NA 0.435 60-70% Pituitary 1.368808848 Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot KRT18P15 keratin 18 pseudogene 15 chr3 32258940 32260230 + 1291 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KRT18P15 NA 0.094 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot UBA52P5 ubiquitin A-52 residue ribosomal protein fusion product 1 pseudogene 5 chr8 123236852 123237062 + 211 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=UBA52P5 NA 0.012 30-40% NA NA CRC,Normal NA NA boxplot RP11-95C14.1 NA chr13 91994518 91996523 + 2006 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-95C14.1 NA 0.012 20-30% NA NA Breast_cancer,Normal NA NA boxplot RP11-278L15.7 NA chr3 149463779 149464114 - 336 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-278L15.7 NA 0.012 20-30% NA NA PAAD NA NA boxplot CH17-125A10.2 uncharacterized LOC101927333 chr1 144627192 144642372 - 15181 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CH17-125A10.2 NA 0.012 90-100% NA NA PAAD NA NA boxplot RP11-306G20.1 NA chr7 129953234 130026989 + 73756 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-306G20.1 NA 0.059 40-50% Testis 2.593258945 Breast_cancer,CRC,HCC,PAAD NA NA boxplot RP11-79D8.2 NA chr9 79726069 79726321 + 253 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-79D8.2 NA 0.082 90-100% NA NA CRC,Normal NA NA boxplot ZNF793-AS1 ZNF793 antisense RNA 1 (head to head) chr19 37497159 37507046 - 9888 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ZNF793-AS1 NA 0.212 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP1-153G14.4 NA chr6 27404010 27406964 - 2955 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-153G14.4 NA 0.047 20-30% NA NA Breast_cancer,CRC,Normal NA NA boxplot LA16c-316G12.2 NA chr16 1358900 1361405 - 2506 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LA16c-316G12.2 NA 0.024 70-80% NA NA CRC,HCC NA NA boxplot RP11-548P2.2 NA chr2 85904279 85904727 + 449 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-548P2.2 NA 0.059 70-80% NA NA CRC,HCC,Normal NA NA boxplot RP4-621F18.2 NA chr1 85482281 85578250 - 95970 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-621F18.2 NA 0.271 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-392O1.4 NA chr17 43544785 43610338 + 65554 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-392O1.4 NA 0.024 90-100% NA NA Breast_cancer,CRC NA NA boxplot ASB16-AS1 ASB16 antisense RNA 1 chr17 44175973 44186717 - 10745 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ASB16-AS1 NA 0.929 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down) NA boxplot NENFP1 neudesin neurotrophic factor pseudogene 1 chr1 46665910 46666375 - 466 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NENFP1 NA 0.035 80-90% NA NA CRC,HCC NA NA boxplot DGAT2L7P diacylglycerol O-acyltransferase 2-like 7, pseudogene chr7 101201809 101203526 - 1718 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DGAT2L7P NA 0.024 60-70% Small Intestine 2.917476979 Breast_cancer,PAAD NA NA boxplot RP11-297L17.2 NA chr16 52607349 52613908 + 6560 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-297L17.2 NA 0.024 80-90% Testis 3.046130402 Breast_cancer,HCC NA NA boxplot RP11-626I20.3 NA chr12 103547794 103559815 + 12022 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-626I20.3 NA 0.059 40-50% Testis 4.906892038 Breast_cancer,CRC,HCC,Normal NA NA boxplot RP11-640N20.1 NA chr17 32003110 32006688 - 3579 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-640N20.1 NA 0.012 90-100% Testis 4.906892038 NA NA NA boxplot RP11-81A22.4 NA chr17 4787057 4789162 + 2106 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-81A22.4 NA 0.059 10-20% NA NA Breast_cancer,Normal NA NA boxplot CTD-2126E3.3 NA chr19 50043196 50051062 - 7867 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2126E3.3 NA 0.082 80-90% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-983P16.4 NA chr12 53014596 53054438 - 39843 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-983P16.4 NA 0.929 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot RP11-434E6.2 NA chr16 54366007 54370699 - 4693 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-434E6.2 NA 0.035 70-80% Testis 4.906892038 Breast_cancer,HCC,Normal,PAAD NA NA boxplot THEM7P thioesterase superfamily member 7, pseudogene chr11 32112049 32343409 - 231361 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=THEM7P NA 0.012 90-100% NA NA Breast_cancer,Normal NA NA boxplot ENPP7P7 ectonucleotide pyrophosphatase/phosphodiesterase 7 pseudogene 7 chr11 67812557 67873367 - 60811 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ENPP7P7 NA 0.024 50-60% NA NA Breast_cancer,CHD,HCC,Normal NA NA boxplot CTA-268H5.14 NA chr22 45262273 45263585 - 1313 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTA-268H5.14 NA 0.024 80-90% NA NA Breast_cancer,HCC,Normal NA NA boxplot RP11-33B1.3 NA chr4 119456350 119457277 + 928 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-33B1.3 NA 0.047 60-70% NA NA CRC,PAAD NA NA boxplot RP11-215A21.2 NA chr10 118872054 118872602 - 549 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-215A21.2 NA 0.588 80-90% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-101E5.1 NA chr9 61229913 61231863 - 1951 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-101E5.1 NA 0.047 70-80% NA NA CRC,HCC,Normal NA NA boxplot RP11-260O18.1 NA chr3 81986138 82463675 + 477538 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-260O18.1 NA 0.012 70-80% Testis 4.906892038 Normal,PAAD NA NA boxplot AC009892.10 NA chr19 54635722 54638892 - 3171 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC009892.10 NA 0.047 70-80% Testis 4.260153393 Breast_cancer,CRC,Normal NA NA boxplot RP11-795F19.1 NA chr18 80046900 80095482 + 48583 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-795F19.1 NA 0.2 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-500B12.1 NA chr9 117648606 117657027 + 8422 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-500B12.1 NA 0.035 30-40% NA NA HCC,Normal NA NA boxplot RP11-967K21.1 NA chr12 28163298 28190738 - 27441 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-967K21.1 NA 0.824 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down) NA boxplot AP001059.5 NA chr21 44250813 44251520 + 708 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AP001059.5 NA 0.012 70-80% Kidney 2.007813778 PAAD NA NA boxplot TSEN15P2 tRNA splicing endonuclease subunit 15 pseudogene 2 chr1 51859778 51860135 + 358 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TSEN15P2 NA 0.012 50-60% NA NA Normal NA NA boxplot RP13-753N3.1 NA chr17 30863921 30864940 - 1020 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP13-753N3.1 NA 0.094 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot AP000251.3 NA chr21 31559245 31560487 + 1243 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AP000251.3 NA 0.035 80-90% Testis 1.763759211 Breast_cancer,CRC,Normal,PAAD NA NA boxplot AC008746.12 NA chr19 54438665 54439544 - 880 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC008746.12 NA 0.129 50-60% NA NA CRC,Normal,PAAD NA NA boxplot CH17-118O6.3 NA chr1 120985692 121052167 - 66476 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CH17-118O6.3 NA 0.012 90-100% NA NA HCC,Normal NA NA boxplot GTSCR1 Gilles de la Tourette syndrome chromosome region, candidate 1 (non-protein coding) chr18 70630534 70650744 - 20211 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GTSCR1 NA 0.329 20-30% Testis 4.25871784 CRC,HCC,Normal,PAAD NA NA boxplot RP11-409K20.7 NA chr9 129883693 129884170 - 478 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-409K20.7 NA 0.059 40-50% NA NA CRC,HCC,PAAD NA NA boxplot AC006129.3 NA chr19 41551568 41552274 - 707 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC006129.3 NA 0.024 80-90% NA NA CRC,Normal,PAAD NA NA boxplot USP12-AS1 USP12 antisense RNA 1 chr13 27162855 27169135 + 6281 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=USP12-AS1 NA 0.012 90-100% Testis 4.20161978 CRC,HCC NA NA boxplot RP11-310E22.5 NA chr10 95141925 95168425 - 26501 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-310E22.5 NA 0.059 40-50% Testis 1.847456267 CRC,HCC,Normal NA NA boxplot RP11-152H18.3 NA chr11 8693357 8696607 + 3251 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-152H18.3 NA 0.118 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-81A1.7 NA chr15 79989905 79990606 + 702 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-81A1.7 NA 0.012 90-100% NA NA Normal NA NA boxplot SPDYE21P speedy/RINGO cell cycle regulator family member E21, pseudogene chr7 67279778 67286230 + 6453 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SPDYE21P NA 0.047 80-90% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CTD-2555A7.3 NA chr16 89113175 89115279 - 2105 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2555A7.3 NA 0.306 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot PART1 prostate androgen-regulated transcript 1 (non-protein coding) chr5 60487713 60547657 + 59945 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PART1 NA 0.153 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-218E20.5 NA chr14 50912226 50913358 + 1133 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-218E20.5 NA 0.212 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot POU5F1P5 POU class 5 homeobox 1 pseudogene 5 chr10 68010205 68010862 - 658 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=POU5F1P5 NA 0.082 70-80% NA NA Breast_cancer,CRC,Normal,PAAD NA NA boxplot RP11-307I14.2 NA chr9 4781475 4782078 - 604 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-307I14.2 NA 0.024 90-100% NA NA CRC,HCC NA NA boxplot RP11-379F12.4 NA chr10 8051541 8053084 + 1544 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-379F12.4 NA 0.012 80-90% NA NA Breast_cancer NA NA boxplot RP4-601P9.1 NA chr12 114768674 114771851 + 3178 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-601P9.1 NA 0.012 90-100% Testis 4.906892038 PAAD NA NA boxplot RP11-1000B6.5 NA chr15 32613733 32615111 + 1379 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1000B6.5 NA 0.271 70-80% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CTD-2062F14.3 NA chr14 100538939 100540409 + 1471 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2062F14.3 NA 0.024 90-100% NA NA HCC,PAAD NA NA boxplot CTD-2147F2.2 NA chr15 97370371 97521811 - 151441 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2147F2.2 NA 0.047 60-70% NA NA CRC,HCC,PAAD NA NA boxplot RP11-234A1.1 NA chr3 101576489 101576947 - 459 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-234A1.1 NA 0.929 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(down),PAAD(down) NA boxplot PRC1-AS1 PRC1 antisense RNA 1 chr15 90966345 90988624 + 22280 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PRC1-AS1 NA 0.271 50-60% Testis 3.064787798 CRC,HCC,Normal,PAAD NA NA boxplot RP11-378I6.1 NA chr9 19926094 19929937 + 3844 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-378I6.1 NA 0.012 30-40% Brain 3.665554494 Breast_cancer,PAAD NA NA boxplot FLJ21408 uncharacterized LOC400512 chr16 27268205 27290492 + 22288 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FLJ21408 NA 0.153 70-80% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot EIF4BP3 eukaryotic translation initiation factor 4B pseudogene 3 chr9 96146007 96147856 + 1850 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=EIF4BP3 NA 1 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-534I8.1 NA chr9 113850687 113851632 - 946 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-534I8.1 NA 0.224 60-70% NA NA Breast_cancer,HCC,Normal NA NA boxplot RP11-467M13.3 NA chr16 16541217 16541847 - 631 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-467M13.3 NA 0.012 70-80% NA NA HCC NA NA boxplot RP11-862L9.2 NA chr18 77002849 77006846 - 3998 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-862L9.2 NA 0.176 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-1127D7.1 NA chr14 98925137 98927805 - 2669 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1127D7.1 NA 0.035 80-90% NA NA Breast_cancer,CRC,Normal NA NA boxplot RP3-404F18.5 NA chrX 119422917 119423547 + 631 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-404F18.5 NA 0.059 80-90% NA NA CRC,Normal NA NA boxplot ANAPC10P1 anaphase promoting complex subunit 10 pseudogene 1 chr1 52253621 52254176 + 556 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ANAPC10P1 NA 0.2 70-80% NA NA CRC,HCC,Normal NA NA boxplot CTD-3138B18.6 NA chr19 58266635 58267685 + 1051 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-3138B18.6 NA 0.071 90-100% NA NA CRC,Normal,PAAD NA NA boxplot USP9YP7 ubiquitin specific peptidase 9, Y-linked pseudogene 7 chrY 17908755 17910806 + 2052 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=USP9YP7 NA 0.012 30-40% NA NA HCC NA NA boxplot CTD-2021H9.1 NA chr12 71007773 71032083 - 24311 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2021H9.1 NA 0.035 40-50% Testis 4.906892038 Breast_cancer,CRC,Normal NA NA boxplot RP11-83B20.9 NA chr12 124622290 124623069 - 780 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-83B20.9 NA 0.035 70-80% NA NA Breast_cancer,CRC,PAAD NA NA boxplot CTD-2224J9.8 NA chr19 53503392 53512687 + 9296 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2224J9.8 NA 0.235 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-173P15.7 NA chr12 120740470 120761592 - 21123 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-173P15.7 exo_circ_045402 0.024 90-100% NA NA Breast_cancer,Normal NA NA boxplot ARHGAP5-AS1 ARHGAP5 antisense RNA 1 (head to head) chr14 32074946 32076793 - 1848 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ARHGAP5-AS1 NA 0.718 10-20% NA NA CHD,CRC,HCC,Normal,PAAD CRC(down),HCC(down) NA boxplot RP11-462B18.3 NA chr9 32836575 32869595 - 33021 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-462B18.3 NA 0.012 90-100% NA NA Breast_cancer,CRC NA NA boxplot RP11-148K1.12 NA chr7 151074742 151076530 - 1789 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-148K1.12 NA 0.247 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP4-663N10.1 NA chr1 115283034 115368072 + 85039 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-663N10.1 NA 0.012 40-50% NA NA Breast_cancer,HCC NA NA boxplot SETP5 SET pseudogene 5 chr9 137640986 137641547 - 562 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SETP5 NA 0.012 40-50% NA NA PAAD NA NA boxplot CH507-254M2.1 NA chr21 7048891 7087229 + 38339 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CH507-254M2.1 NA 0.718 10-20% NA NA CRC,HCC,Normal,PAAD CRC(up),HCC(up),PAAD(up) NA boxplot LINC00840 long intergenic non-protein coding RNA 840 chr10 43859411 43895433 + 36023 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00840 NA 0.541 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-258F1.1 NA chr17 18172625 18184753 - 12129 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-258F1.1 NA 0.224 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CTC-422A18.2 NA chr5 79229904 79230588 + 685 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-422A18.2 NA 0.024 20-30% NA NA Normal NA NA boxplot RP11-323N12.5 NA chr17 78855478 78855844 + 367 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-323N12.5 NA 0.2 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot SH3RF3-AS1 SH3RF3 antisense RNA 1 chr2 109127327 109128930 - 1604 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SH3RF3-AS1 NA 0.082 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-335O4.3 NA chr12 67658991 67670919 - 11929 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-335O4.3 NA 0.318 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot RP11-104L21.2 NA chr1 167457383 167458661 - 1279 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-104L21.2 NA 0.165 40-50% NA NA CRC,Normal,PAAD NA NA boxplot AC009487.6 NA chr2 161500885 161507705 - 6821 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC009487.6 NA 0.929 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down) NA boxplot MIR10A microRNA 10a chr17 48579630 48582259 - 2630 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MIR10A NA 0.012 0-10% NA NA Breast_cancer NA NA boxplot RP11-323I15.5 NA chr15 35099022 35169698 - 70677 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-323I15.5 NA 0.024 80-90% NA NA Normal NA NA boxplot RP11-104J23.1 NA chr17 36001419 36011618 + 10200 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-104J23.1 NA 0.118 70-80% Liver 3.091836169 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP1-180M12.1 NA chr22 31890344 31891434 - 1091 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-180M12.1 NA 0.012 50-60% Testis 4.906892038 PAAD NA NA boxplot RP11-856M7.2 NA chr18 10704297 10709599 + 5303 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-856M7.2 NA 0.035 50-60% Testis 3.986413208 Breast_cancer,HCC,PAAD NA NA boxplot LINC00173 long intergenic non-protein coding RNA 173 chr12 116533422 116536518 + 3097 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00173 NA 0.576 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up) NA boxplot RP11-42F12.1 NA chr3 144442211 144445844 - 3634 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-42F12.1 NA 0.012 80-90% NA NA HCC NA NA boxplot RNF139-AS1 RNF139 antisense RNA 1 (head to head) chr8 124462485 124474576 - 12092 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RNF139-AS1 NA 0.388 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up) NA boxplot AC010987.6 NA chr2 67796054 67825562 - 29509 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC010987.6 NA 0.024 60-70% Pancreas 4.576687141 Normal,PAAD NA NA boxplot RP11-30L15.6 NA chr8 54042989 54045629 - 2641 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-30L15.6 NA 0.129 60-70% Testis 3.609348614 CRC,HCC,Normal NA NA boxplot AC012456.4 NA chr2 11740997 11745301 - 4305 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC012456.4 NA 0.012 0-10% NA NA Breast_cancer,CRC NA NA boxplot LINC01606 long intergenic non-protein coding RNA 1606 chr8 57142689 57240298 + 97610 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01606 NA 0.024 40-50% NA NA Breast_cancer,CRC,HCC NA NA boxplot CTC-246B18.10 NA chr19 39341773 39341945 - 173 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-246B18.10 NA 0.565 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-16K12.1 NA chr15 78978889 78985926 + 7038 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-16K12.1 NA 0.035 30-40% NA NA Breast_cancer,CRC,HCC NA NA boxplot TCAM1P testicular cell adhesion molecule 1, pseudogene chr17 63849292 63864379 + 15088 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TCAM1P NA 0.094 20-30% Testis 4.287120831 Breast_cancer,CRC,HCC,PAAD NA NA boxplot RP11-400L8.2 NA chr2 9505445 9512412 + 6968 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-400L8.2 NA 0.106 50-60% Testis 1.677042349 CRC,HCC,Normal,PAAD NA NA boxplot GLUD1P3 glutamate dehydrogenase 1 pseudogene 3 chr10 73730562 73737311 + 6750 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GLUD1P3 NA 0.482 30-40% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot THAP9-AS1 THAP9 antisense RNA 1 chr4 82893009 82900960 - 7952 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=THAP9-AS1 NA 0.953 0-10% NA NA CHD,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-802D6.1 NA chr17 29369717 29390777 - 21061 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-802D6.1 NA 0.235 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot HMGB3P17 high mobility group box 3 pseudogene 17 chr5 123468781 123469429 - 649 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HMGB3P17 NA 0.012 50-60% Testis 4.906892038 PAAD NA NA boxplot RP11-881M11.1 NA chr11 60913166 60914052 - 887 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-881M11.1 NA 0.024 80-90% Testis 4.885633368 CRC NA NA boxplot GAS5 growth arrest specific 5 (non-protein coding) chr1 173863900 173868882 - 4983 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GAS5 exo_circ_032501,exo_circ_048131 1 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CRC(down) Yes boxplot RPL36AP33 ribosomal protein L36a pseudogene 33 chr9 35507564 35507873 + 310 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL36AP33 NA 0.035 20-30% Testis 1.199641764 CRC NA NA boxplot RP13-977J11.9 NA chr12 132169823 132170043 + 221 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP13-977J11.9 NA 0.012 80-90% NA NA Breast_cancer NA NA boxplot bP-21264C1.2 NA chr21 9325013 9368775 + 43763 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=bP-21264C1.2 NA 0.224 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-488L18.3 NA chr1 247183813 247185482 - 1670 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-488L18.3 exo_circ_002126 0.071 60-70% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot RP11-362F19.1 NA chr4 141319450 141332618 - 13169 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-362F19.1 exo_circ_038667,exo_circ_014451 0.894 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot ENO1P4 enolase 1, (alpha) pseudogene 4 chr2 201621646 201623430 - 1785 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ENO1P4 NA 0.271 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot LINC00265-2P long intergenic non-protein coding RNA 265-2, pseudogene chrY 24276245 24277026 + 782 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00265-2P NA 0.012 40-50% Testis 4.906892038 HCC NA NA boxplot LINC00106 long intergenic non-protein coding RNA 106 chrY 1396427 1399402 + 2976 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00106 NA 0.141 10-20% NA NA CRC,Normal,PAAD NA NA boxplot RP1-144F13.4 NA chr1 39718028 39718595 + 568 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-144F13.4 NA 0.012 10-20% NA NA PAAD NA NA boxplot CTC-428G20.1 NA chr5 115264669 115265464 - 796 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-428G20.1 NA 0.035 30-40% NA NA Normal NA NA boxplot RP11-455F5.3 NA chr16 30096430 30104116 + 7687 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-455F5.3 NA 0.341 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RPL23AP37 ribosomal protein L23a pseudogene 37 chr2 64347193 64347741 - 549 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL23AP37 NA 0.459 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot ZNF877P zinc finger protein 877, pseudogene chr20 21265854 21266465 + 612 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ZNF877P NA 0.012 90-100% Testis 4.233950116 Breast_cancer NA NA boxplot PCDHB17P protocadherin beta 17 pseudogene chr5 141155996 141159061 + 3066 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PCDHB17P NA 0.012 10-20% NA NA Breast_cancer,Normal NA NA boxplot CTB-174O21.2 NA chr19 46728603 46732700 + 4098 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTB-174O21.2 NA 0.318 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-171I2.5 NA chr2 178577103 178577622 + 520 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-171I2.5 NA 0.2 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot AC073072.7 NA chr7 22773646 22773993 - 348 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC073072.7 NA 0.282 80-90% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-770J1.4 NA chr11 118433121 118435206 - 2086 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-770J1.4 NA 0.012 10-20% Brain 1.368660985 Breast_cancer,Normal NA NA boxplot EEF1B2P6 eukaryotic translation elongation factor 1 beta 2 pseudogene 6 chr7 131661952 131662624 - 673 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=EEF1B2P6 NA 1 0-10% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-536K7.3 NA chr10 5934270 5945900 - 11631 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-536K7.3 NA 0.529 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot AF230666.2 NA chr8 132838117 132844298 - 6182 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AF230666.2 NA 0.4 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CYCSP55 cytochrome c, somatic pseudogene 55 chr6 34219439 34220066 + 628 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CYCSP55 NA 0.235 80-90% Testis 4.906892038 Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot ATP5C1P1 ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1 pseudogene 1 chr14 53991101 53991995 - 895 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ATP5C1P1 NA 0.024 90-100% Testis 4.906892038 HCC,Normal,PAAD NA NA boxplot RP11-216L13.19 NA chr9 136799223 136810042 + 10820 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-216L13.19 NA 0.918 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot CTC-564N23.2 NA chr5 77073881 77074520 + 640 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-564N23.2 NA 0.106 60-70% NA NA HCC,Normal NA NA boxplot RP11-144G7.2 NA chr11 108105074 108121684 - 16611 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-144G7.2 NA 0.235 30-40% Testis 4.906892038 HCC,Normal,PAAD NA NA boxplot RP11-16K12.2 NA chr15 78906127 78906809 + 683 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-16K12.2 NA 0.094 50-60% NA NA CRC,Normal,PAAD NA NA boxplot KB-1466C5.1 NA chr21 26459903 26460214 - 312 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KB-1466C5.1 exo_circ_058087 0.012 40-50% NA NA HCC NA NA boxplot BRD7P5 bromodomain containing 7 pseudogene 5 chr13 94757451 94759272 - 1822 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=BRD7P5 NA 0.824 0-10% Testis 4.237815886 Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down),CRC(down) NA boxplot LINC00867 long intergenic non-protein coding RNA 867 chr10 118357108 118365103 + 7996 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00867 NA 0.047 30-40% Testis 2.256176006 HCC,Normal NA NA boxplot RP11-496H1.2 NA chr3 197645669 197646017 + 349 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-496H1.2 NA 0.024 80-90% Testis 3.924157604 Breast_cancer,CRC,Normal NA NA boxplot RP11-284F21.8 NA chr1 156509854 156511681 + 1828 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-284F21.8 NA 0.012 60-70% Muscle 1.653957928 Breast_cancer,Normal NA NA boxplot RP11-289H16.1 NA chr1 144641371 144919902 + 278532 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-289H16.1 NA 0.012 70-80% Testis 4.209630223 Breast_cancer,PAAD NA NA boxplot CSTF3-AS1 CSTF3 antisense RNA 1 (head to head) chr11 33161657 33191598 + 29942 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CSTF3-AS1 NA 0.059 80-90% Testis 3.162185034 Normal NA NA boxplot RP11-321E2.5 NA chr5 17486231 17486825 + 595 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-321E2.5 NA 0.188 30-40% Whole Blood 4.289546252 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot PRELID1P2 PRELI domain containing 1 pseudogene 2 chr6 25678769 25679164 - 396 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PRELID1P2 NA 0.012 60-70% NA NA Breast_cancer,PAAD NA NA boxplot FAM90A24P family with sequence similarity 90, member A24 (pseudogene) chr8 8019429 8024652 - 5224 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FAM90A24P NA 0.012 80-90% NA NA Breast_cancer,CHD,HCC NA NA boxplot RAD1P2 RAD1 pseudogene 2 chr1 159081133 159081795 - 663 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RAD1P2 NA 0.106 20-30% NA NA CRC,HCC,Normal NA NA boxplot CETN4P centrin 4, pseudogene chr4 122730548 122732193 - 1646 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CETN4P exo_circ_049212 0.388 20-30% Testis 2.494020332 CRC,HCC,Normal,PAAD NA NA boxplot AC009961.3 NA chr2 159670708 159712435 - 41728 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC009961.3 NA 0.565 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot THAP12P1 NA chrX 74396871 74399550 - 2680 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=THAP12P1 NA 0.047 80-90% NA NA Breast_cancer,HCC,Normal NA NA boxplot AC069363.1 NA chr17 36072866 36090134 + 17269 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC069363.1 NA 0.553 30-40% Spleen 1.446437875 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-290F24.6 NA chr11 6201901 6203253 - 1353 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-290F24.6 NA 0.141 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP4-545C24.1 NA chr7 144194858 144280547 + 85690 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-545C24.1 NA 0.882 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down),HCC(up) NA boxplot RP11-247A12.2 NA chr9 129176771 129210548 + 33778 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-247A12.2 NA 0.176 50-60% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot RP11-493L12.4 NA chr12 47248124 47257539 + 9416 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-493L12.4 NA 0.529 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-107M16.2 NA chr1 152205858 152207057 + 1200 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-107M16.2 NA 0.024 30-40% Testis 2.698656512 CRC,HCC NA NA boxplot RP11-1099M24.6 NA chr17 7858943 7866083 + 7141 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1099M24.6 NA 0.918 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down) NA boxplot RP11-16N11.2 NA chr3 160753428 160755142 - 1715 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-16N11.2 NA 0.353 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CTB-12O2.1 uncharacterized LOC101927115 chr5 151949571 152270448 + 320878 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTB-12O2.1 NA 0.047 80-90% NA NA Normal NA NA boxplot NUDT16P1 nudix hydrolase 16 pseudogene 1 chr3 131361898 131365122 + 3225 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NUDT16P1 NA 0.8 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot EGFLAM-AS2 EGFLAM antisense RNA 2 chr5 38399814 38403413 - 3600 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=EGFLAM-AS2 NA 0.012 40-50% Testis 4.906892038 PAAD NA NA boxplot AATBC apoptosis associated transcript in bladder cancer chr21 43805758 43812567 - 6810 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AATBC NA 0.953 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down) NA boxplot SNX18P3 sorting nexin 18 pseudogene 3 chr9 38566260 38568211 - 1952 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SNX18P3 NA 0.165 0-10% Testis 2.327901775 Breast_cancer,CHD,CRC,HCC,Normal,PAAD PAAD(up) NA boxplot RP11-2O17.2 NA chr5 61658474 61698432 - 39959 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-2O17.2 NA 0.012 80-90% Testis 4.825635702 Breast_cancer,Normal NA NA boxplot RP11-263K4.5 NA chr12 82481118 82497560 - 16443 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-263K4.5 NA 0.012 40-50% Brain 4.906892038 Normal NA NA boxplot LINC01049 long intergenic non-protein coding RNA 1049 chr13 90493287 90535080 + 41794 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01049 NA 0.012 80-90% Testis 4.906892038 HCC NA NA boxplot RP11-16B13.1 NA chr14 59969116 60091783 - 122668 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-16B13.1 exo_circ_034305,exo_circ_057013 0.2 50-60% Testis 4.721079676 CRC,HCC,Normal,PAAD NA NA boxplot CTD-2054N24.2 NA chr15 99807023 99877148 + 70126 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2054N24.2 NA 0.565 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-110I1.12 NA chr11 118994824 118998004 - 3181 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-110I1.12 NA 0.294 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot UBAC2-AS1 UBAC2 antisense RNA 1 chr13 99196377 99200710 - 4334 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=UBAC2-AS1 NA 0.471 40-50% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot HMGB3P6 high mobility group box 3 pseudogene 6 chr1 164356767 164357364 + 598 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HMGB3P6 NA 0.318 60-70% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP4-695O20.1 NA chr22 46163303 46165347 + 2045 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-695O20.1 NA 0.024 40-50% NA NA Breast_cancer,Normal,PAAD NA NA boxplot RP3-486I3.7 NA chr6 116254207 116256743 + 2537 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-486I3.7 NA 0.059 60-70% NA NA CRC,Normal NA NA boxplot MTCO1P54 MT-CO1 pseudogene 54 chr2 202619185 202619896 - 712 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MTCO1P54 NA 0.012 30-40% NA NA Breast_cancer,PAAD NA NA boxplot RP11-638I2.4 NA chr14 100207407 100238555 - 31149 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-638I2.4 NA 0.247 70-80% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CTC-499B15.5 NA chr19 11639776 11686569 + 46794 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-499B15.5 exo_circ_057845 0.576 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot BTF3P5 basic transcription factor 3 pseudogene 5 chr2 55435156 55435622 - 467 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=BTF3P5 NA 0.035 80-90% NA NA CHD,Normal NA NA boxplot RP11-154D6.2 NA chr6 71251758 71252988 + 1231 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-154D6.2 NA 0.012 90-100% NA NA Normal NA NA boxplot IFITM4P interferon induced transmembrane protein 4 pseudogene chr6 29750729 29751148 - 420 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=IFITM4P NA 0.059 20-30% NA NA CRC,HCC,Normal NA NA boxplot TTTY15 testis-specific transcript, Y-linked 15 (non-protein coding) chrY 12662334 12692233 + 29900 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TTTY15 NA 0.541 0-10% NA NA CHD,CRC,HCC,Normal,PAAD CHD(down),PAAD(up) NA boxplot BUD13P1 BUD13 homolog pseudogene 1 chr11 95143637 95145125 + 1489 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=BUD13P1 NA 0.447 10-20% NA NA CRC,HCC,Normal,PAAD NA NA boxplot AC116035.1 NA chr3 30524745 30527185 + 2441 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC116035.1 NA 0.059 50-60% NA NA HCC,Normal NA NA boxplot GCNT1P1 glucosaminyl (N-acetyl) transferase 1, core 2 pseudogene 1 chr20 18420160 18421454 - 1295 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GCNT1P1 NA 0.012 60-70% NA NA NA NA NA boxplot AC002480.4 NA chr7 22589705 22591622 + 1918 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC002480.4 NA 0.247 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-264L1.3 NA chr16 78534374 78535648 + 1275 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-264L1.3 exo_circ_057436,exo_circ_028789,exo_circ_040328,exo_circ_046048 0.059 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot LINC01144 long intergenic non-protein coding RNA 1144 chr1 45303910 45305619 + 1710 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01144 NA 0.094 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot HMGA1P3 high mobility group AT-hook 1 pseudogene 3 chr12 110429959 110430282 - 324 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HMGA1P3 NA 0.365 50-60% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-686D22.10 NA chr17 35470069 35470628 - 560 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-686D22.10 NA 0.729 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(up) NA boxplot CTD-2135J3.3 NA chr8 10729314 10771392 + 42079 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2135J3.3 NA 0.094 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-597D13.7 NA chr4 158270378 158278676 + 8299 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-597D13.7 NA 0.929 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-415J8.7 NA chr1 33261212 33261680 + 469 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-415J8.7 NA 0.071 50-60% NA NA CRC,HCC,Normal NA NA boxplot RP11-6N17.10 NA chr17 47980398 47996196 - 15799 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-6N17.10 NA 0.106 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CTD-2047H16.3 NA chr17 80339898 80342058 + 2161 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2047H16.3 NA 0.812 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),PAAD(down) NA boxplot RPL21P32 ribosomal protein L21 pseudogene 32 chr2 185956587 185957063 - 477 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL21P32 NA 0.024 80-90% NA NA CRC,Normal NA NA boxplot RP11-288H12.3 NA chr6 160093082 160096212 + 3131 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-288H12.3 NA 0.271 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-11N5.1 NA chr4 186890969 186892366 + 1398 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-11N5.1 NA 0.024 70-80% Testis 2.854354496 CRC,HCC NA NA boxplot RP11-629N8.3 NA chr12 64759521 64779318 + 19798 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-629N8.3 NA 0.047 70-80% NA NA CRC,Normal NA NA boxplot RP5-1022P6.4 NA chr20 5507875 5510002 - 2128 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-1022P6.4 NA 0.035 90-100% Testis 4.906892038 Breast_cancer,CRC,Normal NA NA boxplot LINC00936 long intergenic non-protein coding RNA 936 chr12 89708959 89712590 + 3632 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00936 NA 0.624 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up),HCC(down),PAAD(down) NA boxplot RP11-527H14.6 NA chr18 14877611 14884052 + 6442 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-527H14.6 NA 0.012 50-60% Testis 4.906892038 CRC NA NA boxplot AC079776.1 NA chr2 129869193 129877553 - 8361 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC079776.1 NA 0.012 80-90% Testis 1.173738175 Normal,PAAD NA NA boxplot SSBP3-AS1 SSBP3 antisense RNA 1 chr1 54236440 54239063 + 2624 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SSBP3-AS1 NA 0.071 40-50% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot SEC1P secretory blood group 1, pseudogene chr19 48638071 48682245 + 44175 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SEC1P NA 0.094 50-60% Testis 1.748605821 Breast_cancer,CHD,CRC,HCC,Normal NA NA boxplot RP11-163G10.4 NA chr1 42570970 42571390 + 421 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-163G10.4 NA 0.012 90-100% Testis 3.559043133 NA NA NA boxplot CDCA4P3 cell division cycle associated 4 pseudogene 3 chr1 207658454 207659142 + 689 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CDCA4P3 NA 0.047 60-70% NA NA CRC,Normal NA NA boxplot AP000355.2 NA chr22 24516508 24518386 + 1879 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AP000355.2 NA 0.024 10-20% Liver 3.311317493 Breast_cancer,Normal NA NA boxplot FAM95C family with sequence similarity 95 member C chr9 38540567 38545372 - 4806 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FAM95C NA 0.094 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP5-892K4.1 NA chr1 2141084 2145279 - 4196 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-892K4.1 NA 0.094 50-60% Testis 1.958312149 Breast_cancer,HCC,Normal NA NA boxplot CTD-2630F21.1 NA chr19 36489649 36491040 + 1392 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2630F21.1 NA 0.365 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-381K20.4 NA chr5 137761546 137761936 + 391 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-381K20.4 NA 0.012 80-90% Testis 1.52799928 NA NA NA boxplot MESTP1 mesoderm specific transcript pseudogene 1 chr6 128928995 128929988 - 994 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MESTP1 NA 0.024 90-100% NA NA PAAD NA NA boxplot RP5-1116H23.3 NA chr20 5066082 5068154 - 2073 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-1116H23.3 NA 0.035 60-70% NA NA Breast_cancer,CRC,PAAD NA NA boxplot CTD-2619J13.19 NA chr19 58440448 58445849 + 5402 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2619J13.19 NA 0.176 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot XXbac-BPGBPG55C20.2 NA chr6 57908560 57913911 - 5352 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=XXbac-BPGBPG55C20.2 NA 0.729 10-20% NA NA CRC,HCC,Normal,PAAD CHD(down) NA boxplot AC004540.4 NA chr7 26372144 26376701 - 4558 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC004540.4 NA 0.388 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-553K8.5 NA chr1 198657553 198667061 - 9509 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-553K8.5 NA 0.035 20-30% Testis 3.502848184 CRC,Normal NA NA boxplot RP11-497G19.2 NA chr12 116698336 116703130 + 4795 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-497G19.2 NA 0.035 60-70% NA NA Breast_cancer,Normal,PAAD NA NA boxplot FBXW11P1 F-box and WD repeat domain containing 11 pseudogene 1 chr21 31627127 31628600 - 1474 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FBXW11P1 NA 0.059 20-30% NA NA Breast_cancer,CHD,CRC,Normal,PAAD NA NA boxplot RP11-1055B8.8 NA chr17 81461013 81461937 - 925 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1055B8.8 NA 0.035 70-80% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot CRYZP1 crystallin zeta pseudogene 1 chr7 103088664 103089610 - 947 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CRYZP1 NA 0.012 80-90% NA NA HCC NA NA boxplot AC159540.14 NA chr2 97523949 97524976 - 1028 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC159540.14 NA 0.059 90-100% NA NA CRC,Normal,PAAD NA NA boxplot RP11-146D12.2 NA chr9 40264971 40329221 + 64251 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-146D12.2 NA 0.247 60-70% Testis 2.917366315 CRC,HCC,Normal,PAAD NA NA boxplot LINC01030 long intergenic non-protein coding RNA 1030 chr8 90592804 90606065 - 13262 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01030 NA 0.047 20-30% Testis 4.81562744 CRC,HCC,Normal,PAAD NA NA boxplot IQCH-AS1 IQCH antisense RNA 1 chr15 67403619 67521844 - 118226 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=IQCH-AS1 NA 0.835 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-485F13.1 NA chrX 98573859 98864984 + 291126 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-485F13.1 NA 0.024 0-10% NA NA PAAD NA NA boxplot AP001055.6 NA chr21 44158740 44160076 - 1337 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AP001055.6 NA 0.094 60-70% NA NA CRC,HCC,Normal NA NA boxplot RP11-115L11.1 NA chr4 15730962 15731627 - 666 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-115L11.1 NA 0.012 90-100% Whole Blood 1.119014637 Normal NA NA boxplot RP11-472I20.4 NA chr11 43578889 43840030 + 261142 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-472I20.4 NA 0.682 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot LINC00606 long intergenic non-protein coding RNA 606 chr3 10759484 10764192 - 4709 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00606 NA 0.012 90-100% Testis 4.755166535 Breast_cancer,PAAD NA NA boxplot RP11-501M7.1 NA chr3 143620528 143627690 + 7163 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-501M7.1 NA 0.012 20-30% Testis 4.906892038 Breast_cancer,Normal NA NA boxplot VN1R108P vomeronasal 1 receptor 108 pseudogene chr20 25734264 25735093 + 830 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=VN1R108P NA 0.094 20-30% NA NA CHD,HCC,Normal,PAAD NA NA boxplot FAM95B1 family with sequence similarity 95 member B1 chr9 66047084 66055006 - 7923 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FAM95B1 NA 0.235 70-80% Testis 2.423289078 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC069394.1 NA chr2 138101884 138105905 + 4022 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC069394.1 NA 0.012 30-40% Testis 4.906892038 Normal NA NA boxplot RP11-304F15.5 NA chr17 49939122 49939819 + 698 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-304F15.5 NA 0.012 30-40% NA NA Breast_cancer NA NA boxplot RP4-682C21.2 NA chr1 75743423 75744776 - 1354 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-682C21.2 NA 0.035 70-80% NA NA Breast_cancer,HCC,Normal NA NA boxplot RP11-108A14.1 NA chr8 18864681 18865247 - 567 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-108A14.1 NA 0.012 40-50% NA NA NA NA NA boxplot FTH1P20 ferritin, heavy polypeptide 1 pseudogene 20 chr2 180872867 180873414 - 548 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FTH1P20 NA 1 0-10% NA NA CHD,CRC,HCC,Normal,PAAD CHD(up) NA boxplot RP11-278J6.5 NA chr5 143375628 143375883 - 256 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-278J6.5 NA 0.035 90-100% NA NA CRC NA NA boxplot RP11-455F5.4 NA chr16 30107675 30110541 + 2867 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-455F5.4 NA 0.012 80-90% NA NA NA NA NA boxplot XXbac-BPGBPG55C20.1 NA chr6 57855891 57856468 - 578 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=XXbac-BPGBPG55C20.1 NA 0.024 90-100% NA NA HCC NA NA boxplot LINC01224 long intergenic non-protein coding RNA 1224 chr19 23399233 23416075 - 16843 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01224 NA 0.035 40-50% NA NA Breast_cancer,HCC,PAAD NA NA boxplot RP11-881M11.2 NA chr11 60906789 60909742 + 2954 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-881M11.2 NA 0.212 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot LINC01163 long intergenic non-protein coding RNA 1163 chr10 128181032 128317726 + 136695 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01163 NA 0.094 40-50% NA NA Breast_cancer,CHD,CRC,Normal,PAAD NA NA boxplot KRT18P52 keratin 18 pseudogene 52 chr2 31822591 31823436 - 846 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KRT18P52 NA 0.035 60-70% Testis 2.922693054 CRC,Normal NA NA boxplot RP11-439E19.10 NA chr1 246772301 246775772 + 3472 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-439E19.10 NA 0.212 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-227L6.1 NA chr2 172423807 172424173 - 367 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-227L6.1 NA 0.024 30-40% NA NA HCC,PAAD NA NA boxplot RP11-855A2.1 NA chr17 67955314 67957291 + 1978 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-855A2.1 NA 0.047 70-80% NA NA CRC,Normal NA NA boxplot RP5-1147A1.1 NA chr7 40115685 40115943 + 259 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-1147A1.1 NA 0.024 80-90% Brain 4.906892038 CRC NA NA boxplot CTD-2623N2.11 NA chr19 9834079 9835013 - 935 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2623N2.11 NA 0.047 80-90% Testis 1.652965064 HCC,Normal NA NA boxplot HELLPAR HELLP associated long non-coding RNA chr12 102197585 102402596 + 205012 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HELLPAR NA 0.776 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),PAAD(up) NA boxplot GS1-72M22.1 NA chr8 24912165 24914717 - 2553 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GS1-72M22.1 NA 0.106 30-40% Brain 2.427334034 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC114755.7 NA chr2 106369724 106378247 + 8524 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC114755.7 NA 0.247 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-568K15.1 NA chr1 178006136 178037950 - 31815 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-568K15.1 NA 0.929 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot WDFY3-AS1 WDFY3 antisense RNA 1 chr4 84803258 84810391 + 7134 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=WDFY3-AS1 NA 0.071 60-70% Testis 4.906892038 CRC,HCC,Normal NA NA boxplot RP11-774D14.1 NA chr5 20611840 20937691 + 325852 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-774D14.1 NA 0.035 20-30% Testis 4.906892038 PAAD NA NA boxplot RP11-1055B8.10 NA chr17 81387415 81387766 + 352 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1055B8.10 NA 0.024 10-20% NA NA Breast_cancer,CRC,Normal NA NA boxplot MRPS31P4 mitochondrial ribosomal protein S31 pseudogene 4 chr13 52600119 52637446 + 37328 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MRPS31P4 exo_circ_007444 0.965 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down) NA boxplot AP001626.1 NA chr21 42599280 42615058 - 15779 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AP001626.1 NA 0.035 40-50% Kidney 2.527353201 Breast_cancer,Normal,PAAD NA NA boxplot GSN-AS1 GSN antisense RNA 1 chr9 121280768 121285530 - 4763 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GSN-AS1 NA 0.165 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-421E14.2 NA chr17 51249579 51251748 - 2170 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-421E14.2 NA 0.2 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot FALEC focally amplified long non-coding RNA in epithelial cancer chr1 150515757 150518032 + 2276 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FALEC NA 0.082 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot UGT1A12P UDP glucuronosyltransferase 1 family, polypeptide A12 pseudogene chr2 233585439 233586291 + 853 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=UGT1A12P NA 0.012 20-30% NA NA HCC NA NA boxplot RP11-973H7.5 NA chr18 12738965 12750068 - 11104 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-973H7.5 NA 0.012 90-100% NA NA Breast_cancer,Normal NA NA boxplot CTD-2012K14.6 NA chr16 67549214 67563958 - 14745 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2012K14.6 NA 0.188 70-80% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-666A8.9 NA chr17 76569792 76571240 + 1449 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-666A8.9 NA 0.059 70-80% NA NA Breast_cancer,CRC,Normal,PAAD NA NA boxplot RP11-810P12.1 NA chr11 62011751 62012602 - 852 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-810P12.1 NA 0.024 70-80% Pancreas 2.432668395 Breast_cancer,PAAD NA NA boxplot CTD-2544N14.3 NA chr8 38970360 38973011 - 2652 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2544N14.3 NA 0.906 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(up),PAAD(down) NA boxplot RP11-234B24.4 NA chr12 4806542 4808641 - 2100 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-234B24.4 NA 0.024 70-80% NA NA HCC,Normal NA NA boxplot GGTLC4P gamma-glutamyltransferase light chain 4 pseudogene chr22 24248074 24249466 - 1393 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GGTLC4P NA 0.035 90-100% NA NA Breast_cancer,HCC,PAAD NA NA boxplot AP000769.7 NA chr11 65498010 65498405 - 396 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AP000769.7 NA 0.235 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-566J3.2 NA chr14 100675930 100679884 - 3955 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-566J3.2 NA 0.024 90-100% Adrenal Gland 3.742331815 Breast_cancer,CRC,Normal NA NA boxplot AC007255.8 NA chr7 29514225 29563670 - 49446 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC007255.8 NA 0.118 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CTC-479C5.10 NA chr16 67882461 67886367 + 3907 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-479C5.10 NA 0.918 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-270C12.3 NA chr1 107505203 107505448 + 246 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-270C12.3 NA 0.671 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot FCF1P6 FCF1 pseudogene 6 chr1 50405430 50406024 - 595 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FCF1P6 NA 0.012 20-30% Testis 4.906892038 NA NA NA boxplot Z69666.2 NA chr16 125737 127219 + 1483 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=Z69666.2 NA 0.012 90-100% NA NA Breast_cancer,CRC,PAAD NA NA boxplot RP11-315A17.1 NA chr4 31350284 31351725 + 1442 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-315A17.1 NA 0.012 70-80% NA NA Breast_cancer,HCC,Normal NA NA boxplot RP11-477H21.2 NA chr1 164680085 164680799 + 715 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-477H21.2 exo_circ_047081,exo_circ_021379,exo_circ_015625,exo_circ_053060,exo_circ_025596,exo_circ_043079,exo_circ_031433 0.6 10-20% NA NA CRC,HCC,Normal,PAAD CRC(up) NA boxplot PLBD1-AS1 PLBD1 antisense RNA 1 chr12 14567750 14619755 + 52006 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PLBD1-AS1 NA 0.706 20-30% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-110G21.1 NA chr8 51899325 51947173 + 47849 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-110G21.1 NA 0.765 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(up) NA boxplot TRPM2-AS TRPM2 antisense RNA chr21 44414588 44425272 - 10685 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TRPM2-AS NA 0.212 30-40% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot KRT8P30 keratin 8 pseudogene 30 chr2 218953401 218954050 - 650 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KRT8P30 NA 0.012 60-70% Pituitary 4.125453275 Breast_cancer NA NA boxplot XXcos-LUCA16.1 NA chr3 50239618 50239984 + 367 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=XXcos-LUCA16.1 NA 0.071 50-60% NA NA CRC,HCC,Normal NA NA boxplot LINC00664 long intergenic non-protein coding RNA 664 chr19 21483374 21503238 + 19865 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00664 NA 0.2 30-40% Testis 2.125499552 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-534L20.5 NA chr1 206503948 206504456 + 509 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-534L20.5 NA 0.024 80-90% NA NA CRC NA NA boxplot RP11-251G23.5 NA chr7 105571083 105573660 + 2578 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-251G23.5 NA 0.282 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-401P9.5 NA chr16 50666211 50671639 + 5429 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-401P9.5 NA 0.6 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot FERP1 fer (fps/fes related) tyrosine kinase (phosphoprotein NCP94) pseudogene 1 chrX 123603139 123603931 + 793 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FERP1 NA 0.141 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot SNX18P26 sorting nexin 18 pseudogene 26 chr13 18807279 18808018 - 740 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SNX18P26 NA 0.012 70-80% Testis 4.063855383 Breast_cancer NA NA boxplot RP11-646I6.3 NA chr4 56410516 56431548 + 21033 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-646I6.3 exo_circ_044076 0.071 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-138H8.6 NA chr15 70848883 70849770 - 888 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-138H8.6 NA 0.012 90-100% NA NA NA NA NA boxplot AQP7P3 aquaporin 7 pseudogene 3 chr9 65878766 65894790 + 16025 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AQP7P3 NA 0.247 50-60% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-219J21.1 NA chr8 25685798 25687524 + 1727 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-219J21.1 NA 0.012 60-70% Testis 4.906892038 Breast_cancer,HCC NA NA boxplot RP11-960L18.1 NA chr16 81738248 81767868 + 29621 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-960L18.1 NA 0.812 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-386G11.8 NA chr12 49090208 49093312 + 3105 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-386G11.8 NA 0.024 60-70% Testis 3.811305866 Breast_cancer,PAAD NA NA boxplot OR51B8P olfactory receptor family 51 subfamily B member 8 pseudogene chr11 5330592 5331360 - 769 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=OR51B8P NA 0.024 80-90% NA NA Breast_cancer,Normal NA NA boxplot RP11-195E2.1 NA chr5 71074225 71093193 - 18969 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-195E2.1 NA 0.541 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot AC093390.1 NA chr2 1824412 1828667 + 4256 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC093390.1 NA 0.012 50-60% Artery 3.022142513 Breast_cancer,PAAD NA NA boxplot DENND5B-AS1 DENND5B antisense RNA 1 chr12 31589923 31615666 + 25744 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DENND5B-AS1 NA 0.059 40-50% NA NA Breast_cancer,CRC,Normal,PAAD NA NA boxplot CTD-2609K8.3 NA chr11 44071462 44072403 + 942 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2609K8.3 NA 0.047 80-90% NA NA Breast_cancer,CRC,Normal NA NA boxplot RP11-849H4.4 NA chr11 72014291 72020910 + 6620 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-849H4.4 NA 0.824 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot RP11-681H18.2 NA chr14 89156743 89157574 + 832 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-681H18.2 NA 0.271 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot CTD-2639E6.4 NA chr19 48926171 48926444 + 274 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2639E6.4 NA 0.047 20-30% NA NA CRC,Normal,PAAD NA NA boxplot LINC01043 long intergenic non-protein coding RNA 1043 chr13 112313467 112321758 + 8292 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01043 NA 0.012 40-50% Testis 4.897336214 Breast_cancer,Normal NA NA boxplot RP11-79O8.1 NA chr2 19902025 19902569 + 545 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-79O8.1 exo_circ_009696 0.059 60-70% Testis 2.04490609 CRC,Normal,PAAD NA NA boxplot RP11-142L4.3 NA chr1 192246708 192247487 - 780 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-142L4.3 exo_circ_027100 0.353 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP5-850O15.3 NA chr1 50461469 50471150 + 9682 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-850O15.3 NA 0.012 10-20% Testis 4.742254401 Normal NA NA boxplot RP11-61E11.2 NA chr12 105102472 105107179 - 4708 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-61E11.2 NA 0.059 40-50% Testis 2.157915796 CRC,HCC,Normal,PAAD NA NA boxplot CTB-114C7.4 NA chr5 170308701 170312716 - 4016 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTB-114C7.4 NA 0.647 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),PAAD(down) NA boxplot RP11-771K4.1 NA chr12 31363481 31369301 - 5821 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-771K4.1 NA 0.024 90-100% NA NA Breast_cancer,HCC NA NA boxplot RP11-439E19.9 NA chr1 246682108 246685075 + 2968 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-439E19.9 exo_circ_053269,exo_circ_048297,exo_circ_031465 0.153 20-30% Testis 1.28197951 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-944C7.1 NA chr14 89628921 89642671 - 13751 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-944C7.1 NA 0.059 50-60% Testis 3.19760818 CRC,HCC,Normal NA NA boxplot CSPG4P5 chondroitin sulfate proteoglycan 4 pseudogene 5 chr15 84401807 84408005 - 6199 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CSPG4P5 NA 0.024 60-70% NA NA Breast_cancer,Normal,PAAD NA NA boxplot RP11-23P13.4 NA chr15 41825099 41827936 - 2838 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-23P13.4 NA 0.247 40-50% Testis 2.687216949 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot OR6K5P olfactory receptor family 6 subfamily K member 5 pseudogene chr1 158742146 158743415 - 1270 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=OR6K5P NA 0.035 60-70% NA NA Breast_cancer,CRC,Normal,PAAD NA NA boxplot TUBBP10 tubulin beta class I pseudogene 10 chr1 52994726 52996026 + 1301 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TUBBP10 NA 0.094 70-80% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot MTND5P2 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 5 pseudogene 2 chr13 95692538 95693972 + 1435 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MTND5P2 NA 0.071 30-40% Whole Blood 4.906892038 CRC,Normal,PAAD NA NA boxplot CTD-2012K14.8 NA chr16 67517862 67528675 - 10814 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2012K14.8 NA 0.071 30-40% NA NA CRC,Normal,PAAD NA NA boxplot AC084809.3 NA chr17 32905662 32906584 + 923 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC084809.3 NA 0.035 30-40% Testis 1.305302747 CRC,Normal NA NA boxplot ADD3-AS1 ADD3 antisense RNA 1 chr10 109940104 110008381 - 68278 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ADD3-AS1 NA 0.565 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD PAAD(up) NA boxplot ADPGK-AS1 ADPGK antisense RNA 1 chr15 72782835 72798199 + 15365 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ADPGK-AS1 NA 0.282 20-30% Testis 1.411941439 Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RBM12B-AS1 RBM12B antisense RNA 1 chr8 93740121 93740773 + 653 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RBM12B-AS1 NA 0.165 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot AC002511.3 NA chr19 35432957 35434642 - 1686 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC002511.3 NA 0.153 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC067956.1 NA chr2 220450679 220704566 + 253888 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC067956.1 NA 0.012 80-90% Thyroid 2.671873227 HCC NA NA boxplot RP3-375P9.2 NA chr6 34744176 34744673 + 498 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-375P9.2 NA 0.906 10-20% Testis 4.906892038 CRC,HCC,Normal,PAAD CHD(down),CRC(down) NA boxplot BCDIN3D-AS1 BCDIN3D antisense RNA 1 chr12 49828542 49841143 + 12602 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=BCDIN3D-AS1 NA 0.365 20-30% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up) NA boxplot PDCL3P5 phosducin-like 3 pseudogene 5 chr6 150827663 150828384 + 722 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PDCL3P5 NA 0.635 40-50% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot CLYBL-AS1 CLYBL antisense RNA 1 chr13 99726247 99727491 - 1245 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CLYBL-AS1 NA 0.012 90-100% Testis 4.813461867 Breast_cancer,CRC NA NA boxplot RP11-121C2.2 NA chr4 47840122 47844339 - 4218 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-121C2.2 NA 0.729 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down),PAAD(up) NA boxplot AC009961.5 NA chr2 159812234 159814009 - 1776 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC009961.5 NA 0.059 60-70% Small Intestine 4.906892038 CRC,Normal NA NA boxplot ACTG1P17 actin gamma 1 pseudogene 17 chr15 82725873 82738904 - 13032 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ACTG1P17 NA 0.141 30-40% NA NA Breast_cancer,CRC,Normal,PAAD NA NA boxplot RP11-231D20.2 NA chr8 42233675 42271197 - 37523 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-231D20.2 NA 0.059 60-70% Testis 4.527104892 Breast_cancer,CRC,HCC,PAAD NA NA boxplot AC034243.1 NA chr5 138744434 138753309 - 8876 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC034243.1 NA 0.035 80-90% Testis 1.203552604 CRC,Normal,PAAD NA NA boxplot ERVFRD-3 endogenous retrovirus group FRD member 3 chr9 21929457 21931073 + 1617 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ERVFRD-3 NA 0.094 70-80% NA NA CRC,Normal,PAAD NA NA boxplot RP11-546O6.4 NA chr9 97743208 97744935 + 1728 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-546O6.4 NA 0.012 80-90% Thyroid 3.055676304 HCC NA NA boxplot RP1-276E15.1 NA chr11 35656694 35661339 + 4646 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-276E15.1 NA 0.012 90-100% Testis 4.906892038 Breast_cancer,HCC NA NA boxplot EGFLAM-AS1 EGFLAM antisense RNA 1 chr5 38425036 38427376 - 2341 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=EGFLAM-AS1 NA 0.024 80-90% NA NA HCC NA NA boxplot RP11-392A14.8 NA chr9 35001913 35003663 + 1751 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-392A14.8 NA 0.035 50-60% NA NA HCC,PAAD NA NA boxplot HNRNPA1P41 heterogeneous nuclear ribonucleoprotein A1 pseudogene 41 chr9 4944670 4945902 - 1233 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HNRNPA1P41 NA 0.176 70-80% Testis 3.444707411 Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot HMGA1P8 high mobility group AT-hook 1 pseudogene 8 (functional) chr2 74418122 74418442 - 321 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HMGA1P8 NA 0.459 70-80% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot UBE2L2 ubiquitin conjugating enzyme E2L 2 (pseudogene) chr12 20449655 20450083 - 429 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=UBE2L2 NA 0.012 60-70% NA NA NA NA NA boxplot RP11-861E21.3 NA chr18 12450447 12451042 + 596 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-861E21.3 NA 0.024 70-80% NA NA HCC,PAAD NA NA boxplot SETD8P1 SET domain containing 8 pseudogene 1 chr13 18297554 18298733 + 1180 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SETD8P1 NA 0.918 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down),CRC(down),PAAD(down) NA boxplot LINC01391 long intergenic non-protein coding RNA 1391 chr3 138935189 138944020 - 8832 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01391 NA 0.035 30-40% NA NA Breast_cancer,PAAD NA NA boxplot RP11-285J16.1 NA chr3 37182107 37182734 + 628 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-285J16.1 NA 0.012 90-100% NA NA Normal NA NA boxplot RP11-454C18.1 NA chr3 151637174 151657966 + 20793 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-454C18.1 NA 0.035 50-60% NA NA CRC,HCC,Normal NA NA boxplot RP11-203E14.1 NA chrX 20443326 20492349 + 49024 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-203E14.1 NA 0.012 90-100% NA NA NA NA NA boxplot LINC01282 long intergenic non-protein coding RNA 1282 chrX 39367285 39391774 - 24490 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01282 NA 0.024 20-30% NA NA Breast_cancer,Normal NA NA boxplot SRGAP2-AS1 SRGAP2 antisense RNA 1 chr1 121360156 121398806 - 38651 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SRGAP2-AS1 NA 0.012 90-100% Testis 4.23704365 Normal NA NA boxplot RP11-314C16.1 NA chr6 8784178 8785445 + 1268 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-314C16.1 exo_circ_049901 0.024 10-20% NA NA Normal NA NA boxplot RP11-91H12.1 NA chr5 175903874 175904371 - 498 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-91H12.1 NA 0.012 60-70% NA NA NA NA NA boxplot RP11-372E1.7 NA chr3 142960372 142960543 + 172 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-372E1.7 NA 0.024 80-90% NA NA Normal,PAAD NA NA boxplot RP11-1379J22.5 NA chr5 179657762 179664432 + 6671 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1379J22.5 NA 0.188 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP3-400B16.1 NA chr6 4136072 4157385 + 21314 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-400B16.1 NA 0.224 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot PKD1P1 polycystic kidney disease 1 (autosomal dominant) pseudogene 1 chr16 16310341 16334190 + 23850 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PKD1P1 NA 0.953 0-10% NA NA CHD,CRC,HCC,Normal,PAAD CHD(up),CRC(up),HCC(up),PAAD(up) NA boxplot RP11-17G12.3 NA chr11 47270657 47272110 - 1454 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-17G12.3 NA 0.059 60-70% NA NA CRC,Normal,PAAD NA NA boxplot RP5-1068H6.6 NA chr20 4761300 4761696 + 397 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-1068H6.6 NA 0.035 10-20% NA NA CRC,Normal,PAAD NA NA boxplot RP11-399K21.11 NA chr10 75279726 75401246 - 121521 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-399K21.11 NA 0.035 60-70% NA NA Breast_cancer,PAAD NA NA boxplot AC004692.4 NA chr7 43239066 43249268 - 10203 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC004692.4 NA 0.012 90-100% Testis 4.882917744 Breast_cancer NA NA boxplot C11orf72 chromosome 11 open reading frame 72 chr11 67602880 67606706 - 3827 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=C11orf72 NA 0.035 70-80% NA NA Breast_cancer,CRC,HCC,PAAD NA NA boxplot RP11-730A19.9 NA chr10 13139196 13139533 - 338 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-730A19.9 NA 0.047 30-40% NA NA HCC,Normal NA NA boxplot AC006499.7 NA chr4 10167159 10167765 - 607 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC006499.7 NA 0.059 40-50% Testis 4.906892038 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-480D4.1 NA chr5 8333481 8457558 - 124078 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-480D4.1 NA 0.082 80-90% Testis 4.34585084 Breast_cancer,CRC,HCC,Normal NA NA boxplot RP5-973N23.4 NA chr6 41868622 41869731 + 1110 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-973N23.4 NA 0.012 50-60% NA NA CRC NA NA boxplot RP11-19J5.1 NA chr15 69803316 69804046 - 731 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-19J5.1 NA 0.012 60-70% Whole Blood 4.447288526 CRC NA NA boxplot CTD-2562G15.3 NA chr15 75452964 75453947 - 984 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2562G15.3 NA 0.118 80-90% NA NA Breast_cancer,CRC,Normal,PAAD NA NA boxplot HSPE1P13 heat shock protein family E (Hsp10) member 1 pseudogene 13 chr2 39098149 39098445 - 297 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HSPE1P13 NA 0.071 70-80% NA NA CRC,Normal,PAAD NA NA boxplot AC007365.1 NA chr2 64606975 64616482 + 9508 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC007365.1 NA 0.012 80-90% Testis 4.537660803 Breast_cancer,CRC NA NA boxplot RP11-556N21.1 NA chr13 24566873 24597676 + 30804 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-556N21.1 NA 0.024 20-30% NA NA Normal,PAAD NA NA boxplot OR1F12 olfactory receptor family 1 subfamily F member 12 chr6 28073316 28074233 + 918 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=OR1F12 NA 0.012 80-90% Testis 2.152301434 Normal NA NA boxplot RP11-482M8.1 NA chr16 87492555 87515635 + 23081 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-482M8.1 NA 0.082 30-40% Testis 1.824463111 Breast_cancer,CRC,Normal,PAAD NA NA boxplot RP11-10J21.2 NA chr8 141224288 141226947 - 2660 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-10J21.2 NA 0.141 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP4-681L3.2 NA chr1 205935128 205935768 + 641 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-681L3.2 NA 0.012 80-90% NA NA Breast_cancer NA NA boxplot RP11-73O6.3 NA chr6 130133410 130146179 - 12770 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-73O6.3 exo_circ_004086 0.294 30-40% Testis 1.277225001 CRC,HCC,Normal NA NA boxplot RP1-4G17.2 NA chr17 7282947 7284071 - 1125 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-4G17.2 NA 0.012 80-90% Testis 3.944324096 CRC NA NA boxplot LINC00484 long intergenic non-protein coding RNA 484 chr9 91159573 91165658 + 6086 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00484 NA 0.188 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-88E10.5 NA chr13 112686769 112689815 - 3047 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-88E10.5 NA 0.706 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot CBX3P3 chromobox 3 pseudogene 3 chr5 112777630 112778161 - 532 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CBX3P3 NA 0.012 90-100% NA NA HCC NA NA boxplot SDCBP2-AS1 SDCBP2 antisense RNA 1 chr20 1325405 1378734 + 53330 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SDCBP2-AS1 NA 0.859 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down) NA boxplot CTD-2382E5.6 NA chr15 41908204 41908714 - 511 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2382E5.6 NA 0.071 50-60% NA NA Breast_cancer,CRC,PAAD NA NA boxplot RP11-50B3.4 NA chr11 126208611 126209027 - 417 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-50B3.4 NA 0.024 80-90% NA NA CRC NA NA boxplot SMPD4P1 sphingomyelin phosphodiesterase 4 pseudogene 1 chr22 20602595 20656914 - 54320 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SMPD4P1 NA 0.482 0-10% Testis 4.0897145 Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down),HCC(down),PAAD(down) NA boxplot RP11-890B15.2 NA chr11 130844191 130865561 - 21371 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-890B15.2 NA 0.059 60-70% Testis 1.555209531 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot UBE2FP3 ubiquitin conjugating enzyme E2F (putative) pseudogene 3 chr1 111437514 111438037 + 524 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=UBE2FP3 NA 0.024 50-60% NA NA Normal NA NA boxplot RP4-724E13.2 NA chr7 50866747 51022990 + 156244 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-724E13.2 NA 0.012 90-100% NA NA NA NA NA boxplot AC006019.4 NA chr7 154092201 154096043 - 3843 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC006019.4 NA 0.012 90-100% NA NA Breast_cancer,HCC NA NA boxplot RP11-110H1.4 NA chr18 49484536 49486149 - 1614 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-110H1.4 NA 0.035 70-80% NA NA Breast_cancer,CRC,Normal NA NA boxplot AL022344.7 NA chr10 42751178 42752145 - 968 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AL022344.7 NA 0.588 10-20% NA NA CRC,HCC,Normal,PAAD CHD(down),HCC(down) NA boxplot RPL5P4 ribosomal protein L5 pseudogene 4 chr1 35350722 35351607 + 886 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL5P4 exo_circ_043239 1 0-10% NA NA CHD,CRC,HCC,Normal,PAAD CRC(up),HCC(up) NA boxplot RPS2P4 ribosomal protein S2 pseudogene 4 chr14 104835997 104836852 - 856 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPS2P4 NA 0.212 90-100% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-1396O13.2 NA chr4 9563171 9563950 + 780 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1396O13.2 NA 0.024 60-70% NA NA CRC NA NA boxplot RP11-504P24.9 NA chr1 223994262 223995196 + 935 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-504P24.9 NA 0.153 40-50% NA NA CRC,HCC,Normal NA NA boxplot RP11-124N14.3 NA chr10 17233325 17234833 - 1509 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-124N14.3 NA 0.918 0-10% Nerve 2.03704501 Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),HCC(up),PAAD(up) NA boxplot FAM103A2P family with sequence similarity 103, member A2 pseudogene chr6 166586124 166586477 - 354 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FAM103A2P NA 0.941 20-30% NA NA CHD,CRC,HCC,Normal,PAAD CHD(down),CRC(down),PAAD(down) NA boxplot RP5-933K21.3 NA chr6 157323964 157324477 + 514 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-933K21.3 NA 0.071 30-40% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot RP11-159H10.1 NA chr8 69859264 69860540 - 1277 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-159H10.1 NA 0.012 90-100% Muscle 4.032859598 Normal NA NA boxplot SCAANT1 SCA7/ATXN7 antisense RNA 1 chr3 63911518 63911772 - 255 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SCAANT1 NA 0.059 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot IQSEC3P1 IQ motif and Sec7 domain 3 pseudogene 1 chr12 2752597 2753132 - 536 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=IQSEC3P1 NA 0.035 80-90% NA NA Breast_cancer,HCC,Normal NA NA boxplot RP11-65M17.1 NA chr11 112534220 112555802 - 21583 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-65M17.1 NA 0.035 50-60% Testis 3.612314531 CRC,HCC NA NA boxplot RP11-184M15.1 NA chr4 128567972 128570531 - 2560 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-184M15.1 NA 0.024 50-60% NA NA HCC,Normal NA NA boxplot RP11-253M7.6 NA chr15 69391192 69392149 + 958 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-253M7.6 NA 0.012 70-80% NA NA NA NA NA boxplot ARHGAP22-IT1 ARHGAP22 intronic transcript 1 chr10 48510525 48511589 - 1065 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ARHGAP22-IT1 NA 0.024 60-70% Testis 4.906892038 PAAD NA NA boxplot RP11-180K7.1 NA chr3 112802478 112812819 + 10342 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-180K7.1 NA 0.012 60-70% NA NA NA NA NA boxplot MT1P1 metallothionein 1 pseudogene 1 chr9 95413267 95413449 - 183 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MT1P1 NA 0.012 80-90% NA NA NA NA NA boxplot NAMPTP1 nicotinamide phosphoribosyltransferase pseudogene 1 chr10 36521721 36524234 - 2514 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NAMPTP1 NA 1 0-10% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot ANKRD10-IT1 ANKRD10 intronic transcript 1 chr13 110894639 110899172 - 4534 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ANKRD10-IT1 NA 0.153 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-664I21.5 NA chr11 124883691 124887789 + 4099 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-664I21.5 NA 0.059 90-100% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-407N8.5 NA chr12 50953924 50954356 - 433 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-407N8.5 NA 0.012 0-10% NA NA PAAD NA NA boxplot RP11-131O15.2 NA chr1 67278052 67278779 + 728 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-131O15.2 NA 0.012 80-90% NA NA PAAD NA NA boxplot EIF5AP2 eukaryotic translation initiation factor 5A pseudogene 2 chr17 78157403 78159135 + 1733 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=EIF5AP2 NA 0.047 10-20% NA NA Breast_cancer,CHD,CRC,Normal NA NA boxplot AC087499.7 NA chr17 20647287 20681799 + 34513 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC087499.7 NA 0.024 70-80% Testis 4.906892038 Normal,PAAD NA NA boxplot HMGB1P1 high mobility group box 1 pseudogene 1 chr20 57488392 57489027 - 636 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HMGB1P1 NA 0.894 20-30% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-168A11.4 NA chr5 80019609 80019920 + 312 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-168A11.4 NA 0.035 20-30% NA NA CRC,Normal NA NA boxplot FTLP14 ferritin, light polypeptide pseudogene 14 chr16 68822587 68823070 + 484 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FTLP14 NA 0.082 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot AP005901.1 NA chr18 15307663 15330282 - 22620 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AP005901.1 NA 0.024 50-60% Testis 4.776579612 Breast_cancer,PAAD NA NA boxplot REXO1L1P REX1, RNA exonuclease 1 homolog-like 1, pseudogene chr8 85656442 85663497 - 7056 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=REXO1L1P NA 0.047 80-90% NA NA Breast_cancer,HCC,PAAD NA NA boxplot RP11-656D10.3 NA chr1 40493157 40508661 - 15505 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-656D10.3 NA 0.165 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot SNAI3-AS1 SNAI3 antisense RNA 1 chr16 88663298 88687186 + 23889 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SNAI3-AS1 NA 0.529 30-40% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-699L21.1 NA chr3 193957372 194003659 - 46288 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-699L21.1 NA 0.059 40-50% NA NA Breast_cancer,CRC,HCC,PAAD NA NA boxplot RP11-8L2.1 NA chr4 83796436 84293412 - 496977 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-8L2.1 NA 0.024 20-30% Testis 2.974233783 PAAD NA NA boxplot RP11-269F20.1 NA chr1 243545532 243548329 + 2798 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-269F20.1 NA 0.035 90-100% NA NA Breast_cancer,CRC,Normal NA NA boxplot CTB-186G2.1 NA chr19 38596346 38601694 + 5349 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTB-186G2.1 NA 0.318 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-115D19.1 NA chr4 89551356 89726752 + 175397 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-115D19.1 NA 0.659 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD HCC(up) NA boxplot RP11-363N22.2 NA chr10 933026 942743 + 9718 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-363N22.2 NA 0.047 60-70% Testis 4.751165866 CRC,PAAD NA NA boxplot CTD-2012K14.5 NA chr16 67550815 67552935 - 2121 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2012K14.5 NA 0.059 80-90% NA NA Breast_cancer,CRC,PAAD NA NA boxplot RP11-131M11.2 NA chr1 33141871 33143230 - 1360 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-131M11.2 NA 0.259 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP1-92O14.3 NA chr1 43354684 43358658 - 3975 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-92O14.3 NA 0.365 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot SUGT1P NA chr9 33503655 33510711 - 7057 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SUGT1P NA 0.635 10-20% Testis 1.184922215 CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-155G14.5 NA chr7 128466563 128469171 + 2609 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-155G14.5 NA 0.176 80-90% NA NA CRC,HCC,Normal,PAAD NA NA boxplot LINC00264 long intergenic non-protein coding RNA 264 chr10 26589865 26594330 + 4466 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00264 NA 0.329 40-50% Testis 4.11596326 Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot SLC25A47P1 NA chr11 59263389 59263802 - 414 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SLC25A47P1 NA 0.012 10-20% NA NA CRC NA NA boxplot AC022173.2 NA chr7 137953348 137957966 + 4619 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC022173.2 NA 0.024 30-40% Pituitary 4.906892038 Normal NA NA boxplot RP11-503P10.1 NA chr2 27053618 27054276 - 659 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-503P10.1 NA 0.294 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP5-999L4.2 NA chr20 19871891 19872284 + 394 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-999L4.2 NA 0.082 60-70% NA NA CRC,Normal,PAAD NA NA boxplot CTC-444N24.13 NA chr19 57350848 57352012 - 1165 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-444N24.13 NA 0.012 90-100% NA NA Normal NA NA boxplot RP11-379B8.1 NA chr6 81845185 81933480 - 88296 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-379B8.1 NA 0.106 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot KB-1608C10.2 NA chr8 94791643 94793106 - 1464 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KB-1608C10.2 NA 0.047 90-100% NA NA HCC,Normal,PAAD NA NA boxplot RP11-47G11.2 NA chr10 124004304 124004828 - 525 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-47G11.2 NA 0.047 60-70% Whole Blood 1.402993678 Breast_cancer,CRC,Normal NA NA boxplot VN1R81P vomeronasal 1 receptor 81 pseudogene chr19 21123817 21124188 + 372 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=VN1R81P NA 0.294 30-40% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-328P23.3 NA chr7 65508773 65508944 - 172 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-328P23.3 NA 0.071 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CTD-2530H12.8 NA chr11 75596144 75597270 - 1127 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2530H12.8 NA 0.024 60-70% NA NA CRC,HCC,Normal NA NA boxplot RPL37P2 ribosomal protein L37 pseudogene 2 chr11 67682772 67683058 - 287 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL37P2 NA 0.941 60-70% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot LINC00315 long intergenic non-protein coding RNA 315 chr21 45300245 45305257 - 5013 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00315 NA 0.035 20-30% NA NA Breast_cancer,HCC,Normal NA NA boxplot RP11-945A11.1 NA chr11 23730588 23796970 + 66383 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-945A11.1 NA 0.047 70-80% Testis 4.906892038 Breast_cancer,Normal,PAAD NA NA boxplot RP11-598D12.4 NA chr16 33976039 33987630 + 11592 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-598D12.4 NA 0.024 90-100% Testis 4.67152712 Breast_cancer,CRC NA NA boxplot RP11-88I18.3 NA chr9 68426843 68429369 + 2527 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-88I18.3 NA 0.012 10-20% NA NA Breast_cancer,PAAD NA NA boxplot RP11-706O15.5 NA chrX 3891438 3920746 - 29309 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-706O15.5 NA 0.835 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(up),HCC(up),PAAD(up) NA boxplot ACTR6P1 ACTR6 pseudogene 1 chr4 106836498 106837601 - 1104 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ACTR6P1 NA 0.012 30-40% NA NA PAAD NA NA boxplot RP11-339B21.11 NA chr9 128391461 128392016 + 556 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-339B21.11 NA 0.271 70-80% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-834C11.10 NA chr12 54162065 54164452 - 2388 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-834C11.10 NA 0.035 30-40% NA NA Breast_cancer,Normal NA NA boxplot CTB-75G16.3 NA chr17 36634069 36634698 + 630 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTB-75G16.3 NA 0.035 70-80% NA NA Breast_cancer,Normal,PAAD NA NA boxplot GLTPP1 glycolipid transfer protein pseudogene 1 chr11 18189000 18189621 + 622 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GLTPP1 NA 0.047 80-90% NA NA CHD,CRC,Normal NA NA boxplot RP4-765C7.2 NA chr1 178411616 178411972 + 357 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-765C7.2 NA 0.024 40-50% Cervix 1.662197046 HCC NA NA boxplot RP11-977B10.2 NA chr12 49232790 49264756 - 31967 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-977B10.2 NA 0.165 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot DGCR11 DiGeorge syndrome critical region gene 11 (non-protein coding) chr22 19046162 19048375 - 2214 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DGCR11 NA 0.294 20-30% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-424M22.3 NA chr12 16567411 16573940 + 6530 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-424M22.3 NA 0.024 60-70% NA NA Breast_cancer,CRC NA NA boxplot CTD-3222D19.12 NA chr19 16542746 16544814 + 2069 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-3222D19.12 NA 0.118 70-80% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot ANKRD18CP ankyrin repeat domain 18C, pseudogene chr9 97156570 97221235 - 64666 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ANKRD18CP NA 0.318 10-20% Testis 3.172763277 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-538D16.2 NA chr1 182062677 182069253 - 6577 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-538D16.2 NA 0.024 70-80% Ovary 1.952212218 CRC,Normal NA NA boxplot RP11-347C18.1 NA chr8 94891239 94892107 + 869 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-347C18.1 NA 0.012 50-60% Brain 4.906892038 NA NA NA boxplot RP11-114J13.1 NA chr5 126076800 126279801 - 203002 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-114J13.1 NA 0.024 70-80% Testis 4.906892038 HCC NA NA boxplot RP11-512F24.1 NA chr1 113449700 113450728 + 1029 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-512F24.1 NA 0.929 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down) NA boxplot KCND3-IT1 KCND3 intronic transcript 1 chr1 111853762 111856905 - 3144 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KCND3-IT1 NA 0.012 10-20% NA NA Breast_cancer,Normal NA NA boxplot KIAA0125 KIAA0125 chr14 105917979 105932642 + 14664 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KIAA0125 NA 1 0-10% Spleen 2.664478121 Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down) NA boxplot C18orf65 chromosome 18 open reading frame 65 chr18 76495521 76498088 + 2568 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=C18orf65 NA 0.047 10-20% NA NA Breast_cancer,Normal,PAAD NA NA boxplot HERC2P3 hect domain and RLD 2 pseudogene 3 chr15 20379495 20506180 - 126686 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HERC2P3 NA 1 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up),CRC(up),HCC(up),PAAD(up) NA boxplot AC005162.4 NA chr7 29080284 29082527 + 2244 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC005162.4 NA 0.012 90-100% Testis 4.906892038 Breast_cancer,CRC NA NA boxplot RP11-142A22.4 NA chr4 145335263 145340421 - 5159 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-142A22.4 NA 0.082 70-80% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot AB015752.3 NA chr8 90534611 90620070 - 85460 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AB015752.3 NA 0.165 40-50% Testis 4.153807441 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC092573.2 NA chr2 173338219 173356208 - 17990 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC092573.2 NA 0.012 90-100% NA NA NA NA NA boxplot CTD-3154N5.2 NA chr15 74598919 74599397 - 479 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-3154N5.2 NA 0.659 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),PAAD(down) NA boxplot CACNA1C-AS2 CACNA1C antisense RNA 2 chr12 2668500 2672220 - 3721 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CACNA1C-AS2 exo_circ_030307 0.176 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot PPP1R26P1 protein phosphatase 1 regulatory subunit 26 pseudogene 1 chr13 48316863 48320475 - 3613 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PPP1R26P1 NA 0.094 50-60% NA NA Breast_cancer,CHD,CRC,HCC,Normal NA NA boxplot RP11-529E10.6 NA chr4 3503597 3504457 - 861 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-529E10.6 NA 0.012 50-60% NA NA Breast_cancer,CRC NA NA boxplot RP11-70C1.1 NA chr3 42770612 42773635 + 3024 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-70C1.1 NA 0.659 30-40% Testis 1.407366526 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC002480.5 NA chr7 22571607 22661792 - 90186 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC002480.5 NA 0.494 20-30% Spleen 4.186619277 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot HCG4P5 HLA complex group 4 pseudogene 5 chr6 29942075 29943067 - 993 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HCG4P5 NA 0.612 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot AC008746.3 NA chr19 54430654 54434698 - 4045 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC008746.3 NA 0.035 60-70% Testis 1.362343348 Breast_cancer,CRC NA NA boxplot CTB-129P6.4 NA chr19 44882027 44890876 - 8850 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTB-129P6.4 NA 0.082 90-100% NA NA HCC,Normal,PAAD NA NA boxplot RPL7P52 ribosomal protein L7 pseudogene 52 chr22 40106325 40107066 - 742 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL7P52 NA 0.012 60-70% NA NA Normal NA NA boxplot AL133243.3 NA chr2 32548675 32549040 + 366 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AL133243.3 NA 0.035 70-80% NA NA CRC,Normal NA NA boxplot RP11-392O17.2 NA chr1 219270774 219273387 + 2614 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-392O17.2 exo_circ_053196,exo_circ_040974 0.353 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-358B23.5 NA chr17 42268587 42269807 + 1221 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-358B23.5 NA 0.035 70-80% NA NA CRC NA NA boxplot RP11-327F22.4 NA chr16 50783859 50803338 - 19480 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-327F22.4 NA 0.024 80-90% Testis 2.928042327 Normal NA NA boxplot CTD-2561B21.7 NA chr17 80999509 81000130 - 622 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2561B21.7 NA 0.341 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-476K15.1 NA chr18 1509183 1647097 + 137915 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-476K15.1 NA 0.024 80-90% Testis 4.906892038 HCC,Normal NA NA boxplot RP11-6O2.2 NA chr15 99028538 99031053 + 2516 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-6O2.2 NA 0.047 80-90% NA NA Breast_cancer,CRC,Normal NA NA boxplot RP11-73M18.8 NA chr14 103696353 103697163 + 811 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-73M18.8 NA 0.706 20-30% NA NA CRC,HCC,Normal,PAAD PAAD(up) NA boxplot MYO5BP2 myosin VB pseudogene 2 chr9 62857208 62858484 + 1277 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MYO5BP2 NA 0.035 80-90% Testis 4.110366431 Breast_cancer,HCC,Normal NA NA boxplot RP11-298J20.4 NA chr10 124917143 124942881 + 25739 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-298J20.4 exo_circ_012975,exo_circ_029526,exo_circ_000582 0.847 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD HCC(up) NA boxplot RPS4XP20 ribosomal protein S4X pseudogene 20 chr19 34022656 34023427 - 772 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPS4XP20 NA 0.012 40-50% NA NA Breast_cancer,PAAD NA NA boxplot RP11-384C4.7 NA chr1 212299495 212331713 - 32219 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-384C4.7 NA 0.024 20-30% NA NA Normal NA NA boxplot RP11-54H7.4 NA chr13 109269634 109273838 + 4205 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-54H7.4 NA 0.282 0-10% NA NA CRC,HCC,Normal,PAAD PAAD(up) NA boxplot LINC00504 long intergenic non-protein coding RNA 504 chr4 14470465 14888169 - 417705 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00504 exo_circ_043998,exo_circ_007593 0.776 0-10% Skin 1.120822649 CHD,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-411G2.1 NA chr12 114929757 114929935 - 179 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-411G2.1 NA 0.012 60-70% NA NA Breast_cancer,PAAD NA NA boxplot PKI55 DKFZp434H1419 chr2 216217045 216220192 + 3148 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PKI55 NA 0.929 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down),PAAD(down) NA boxplot RP11-902B17.1 NA chr14 61298164 61322818 - 24655 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-902B17.1 exo_circ_017007 0.635 10-20% NA NA CRC,HCC,Normal,PAAD CHD(down) NA boxplot CTD-2507G9.1 NA chr11 26189123 26208347 + 19225 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2507G9.1 NA 0.012 80-90% Adipose 3.015507049 PAAD NA NA boxplot RP11-813P10.2 NA chr12 59812102 59812576 + 475 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-813P10.2 NA 0.024 90-100% Spleen 1.775797108 HCC,Normal NA NA boxplot RP11-326A19.5 NA chr15 89201091 89201768 - 678 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-326A19.5 NA 0.153 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-96D1.7 NA chr16 68256162 68260443 - 4282 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-96D1.7 NA 0.129 80-90% Testis 3.416561692 CRC,HCC,Normal NA NA boxplot AP000146.2 NA chr21 24938431 24992817 - 54387 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AP000146.2 NA 0.024 30-40% Testis 4.906892038 Breast_cancer,Normal NA NA boxplot LINC00458 long intergenic non-protein coding RNA 458 chr13 54115783 54132866 - 17084 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00458 NA 0.012 80-90% Testis 4.906892038 HCC NA NA boxplot RP11-264I13.2 NA chr9 2041900 2046023 - 4124 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-264I13.2 NA 0.129 60-70% NA NA CRC,HCC,Normal NA NA boxplot PDCL3P6 phosducin-like 3 pseudogene 6 chr1 52179848 52180553 + 706 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PDCL3P6 NA 0.035 60-70% Testis 2.959233953 CRC,PAAD NA NA boxplot OLFM5P olfactomedin family member 5, pseudogene chr11 5518441 5524955 - 6515 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=OLFM5P NA 0.071 20-30% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot RP5-1096J16.1 NA chr20 20258407 20267809 - 9403 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-1096J16.1 NA 0.012 90-100% Pituitary 3.399435672 Breast_cancer,Normal NA NA boxplot RP11-127I20.5 NA chr16 4795265 4796532 - 1268 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-127I20.5 NA 0.059 70-80% Testis 1.729486921 Breast_cancer,CRC,HCC,Normal NA NA boxplot RP11-360L9.7 NA chr8 41540381 41545044 - 4664 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-360L9.7 NA 0.047 10-20% NA NA Breast_cancer,HCC,Normal NA NA boxplot RP11-332M4.1 NA chr9 95599545 95606286 - 6742 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-332M4.1 NA 0.012 70-80% Testis 4.906892038 HCC NA NA boxplot WWTR1-IT1 WWTR1 intronic transcript 1 chr3 149648997 149650184 - 1188 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=WWTR1-IT1 NA 0.035 30-40% NA NA Normal,PAAD NA NA boxplot RP13-890H12.2 NA chr17 45168800 45171584 - 2785 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP13-890H12.2 NA 0.576 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot CATSPER2P1 cation channel, sperm associated 2 pseudogene 1 chr15 43726918 43747094 - 20177 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CATSPER2P1 NA 0.576 20-30% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot AC093627.8 NA chr7 77038 81178 + 4141 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC093627.8 NA 0.647 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),HCC(down),PAAD(down) NA boxplot SLC2A3P2 solute carrier family 2 (facilitated glucose transporter), member 3 pseudogene 2 chr1 64984608 64986087 - 1480 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SLC2A3P2 NA 0.059 30-40% NA NA Breast_cancer,Normal,PAAD NA NA boxplot RP11-49O14.2 NA chr9 94900429 94904754 + 4326 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-49O14.2 NA 0.059 50-60% NA NA Breast_cancer,CRC,Normal NA NA boxplot SEPT14P3 NA chr3 198228194 198228376 + 183 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SEPT14P3 NA 0.106 80-90% NA NA HCC,Normal,PAAD NA NA boxplot SNRPFP1 small nuclear ribonucleoprotein polypeptide F pseudogene 1 chr20 49729591 49729842 - 252 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SNRPFP1 NA 0.624 70-80% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot VIPR1-AS1 VIPR1 antisense RNA 1 chr3 42506465 42533258 - 26794 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=VIPR1-AS1 NA 0.094 50-60% Lung 1.102522149 Breast_cancer,CRC,HCC,PAAD NA NA boxplot RP11-79P5.9 NA chr5 73497550 73498293 - 744 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-79P5.9 NA 0.106 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-775C24.5 NA chr15 80999593 80999981 - 389 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-775C24.5 NA 0.741 10-20% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(down) NA boxplot ZNF807 zinc finger protein 807 chr19 34542462 34545395 - 2934 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ZNF807 NA 0.012 90-100% NA NA Normal NA NA boxplot LINC01057 long intergenic non-protein coding RNA 1057 chr1 94613814 94855426 - 241613 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01057 NA 0.165 20-30% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot AC011290.5 NA chr7 39569376 39570198 - 823 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC011290.5 NA 0.012 90-100% NA NA CRC NA NA boxplot AC018865.5 NA chr2 129992889 129994040 + 1152 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC018865.5 NA 0.482 80-90% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CTD-2201E9.3 NA chr5 9498401 9498775 - 375 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2201E9.3 NA 0.024 70-80% NA NA PAAD NA NA boxplot RPS15AP3 ribosomal protein S15a pseudogene 3 chr14 47444106 47444494 - 389 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPS15AP3 NA 0.012 10-20% NA NA PAAD NA NA boxplot CTD-3193K9.3 NA chr17 42683187 42699466 - 16280 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-3193K9.3 NA 0.035 90-100% NA NA Breast_cancer,CRC,Normal NA NA boxplot AC002115.5 NA chr19 35597907 35601501 + 3595 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC002115.5 NA 0.012 80-90% Testis 4.798216383 Normal NA NA boxplot RP13-46H24.1 NA chr11 528907 529659 + 753 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP13-46H24.1 NA 0.012 10-20% NA NA Breast_cancer,HCC NA NA boxplot RP11-95M15.2 NA chr6 137705423 137707201 - 1779 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-95M15.2 NA 0.165 70-80% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-53B2.5 NA chr18 13500641 13501289 - 649 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-53B2.5 NA 0.012 0-10% NA NA Normal NA NA boxplot RP11-58E21.1 NA chr14 50052857 50053569 + 713 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-58E21.1 NA 0.012 90-100% NA NA Normal NA NA boxplot RP11-849N15.4 NA chr17 15379864 15417878 - 38015 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-849N15.4 NA 0.012 50-60% NA NA NA NA NA boxplot AC114737.3 NA chr7 76968346 76968518 + 173 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC114737.3 NA 0.012 70-80% NA NA HCC,Normal NA NA boxplot EAF1-AS1 EAF1 antisense RNA 1 chr3 15436171 15455940 - 19770 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=EAF1-AS1 NA 0.506 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot AC017081.2 NA chr2 206410087 206410909 - 823 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC017081.2 NA 0.129 60-70% Bladder 1.61852978 Breast_cancer,HCC,Normal NA NA boxplot OR7E12P olfactory receptor family 7 subfamily E member 12 pseudogene chr11 3390780 3391752 - 973 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=OR7E12P NA 0.012 20-30% NA NA Breast_cancer,PAAD NA NA boxplot AC016716.1 NA chr2 80162428 80163135 - 708 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC016716.1 NA 0.329 70-80% NA NA CRC,HCC,Normal,PAAD NA NA boxplot AC068134.10 NA chr2 232343116 232343903 + 788 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC068134.10 NA 0.282 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot UBE2Q2P6 ubiquitin conjugating enzyme E2Q family member 2 pseudogene 6 chr15 82445719 82454837 + 9119 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=UBE2Q2P6 NA 0.012 50-60% NA NA Breast_cancer NA NA boxplot KRR1P1 KRR1, small subunit (SSU) processome component, homolog (yeast) pseudogene 1 chr13 20070250 20072136 - 1887 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KRR1P1 NA 0.035 80-90% NA NA Breast_cancer,CRC,Normal NA NA boxplot RP11-46A10.5 NA chr1 180944042 180976482 - 32441 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-46A10.5 NA 0.129 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot TPT1-AS1 TPT1 antisense RNA 1 chr13 45341345 45393413 + 52069 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TPT1-AS1 NA 0.835 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up),CRC(up),PAAD(up) NA boxplot RP11-164P12.4 NA chr4 151667224 151670502 + 3279 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-164P12.4 NA 0.141 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-573G6.4 NA chr10 22252072 22254589 + 2518 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-573G6.4 NA 0.424 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC016696.1 NA chr2 46256860 46257177 - 318 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC016696.1 NA 0.012 80-90% NA NA Breast_cancer,CRC NA NA boxplot RP11-321E2.4 NA chr5 17444010 17483946 + 39937 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-321E2.4 NA 0.2 40-50% Whole Blood 3.94483519 CRC,HCC,Normal NA NA boxplot RP11-53A1.3 NA chr1 214051194 214187773 - 136580 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-53A1.3 NA 0.059 80-90% NA NA Breast_cancer,CRC,HCC NA NA boxplot RPSAP70 ribosomal protein SA pseudogene 70 chr4 186157896 186158843 + 948 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPSAP70 NA 0.129 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot HSPD1P11 heat shock protein family D (Hsp60) member 1 pseudogene 11 chr5 95768999 95770700 + 1702 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HSPD1P11 exo_circ_037136 0.059 20-30% NA NA Breast_cancer,CRC,Normal,PAAD NA NA boxplot RPL30P11 ribosomal protein L30 pseudogene 11 chr12 14356842 14365503 - 8662 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL30P11 NA 0.047 80-90% Testis 4.279362843 Breast_cancer,HCC,Normal NA NA boxplot ZNF385D-AS1 ZNF385D antisense RNA 1 chr3 21542816 21579959 + 37144 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ZNF385D-AS1 NA 0.047 50-60% Testis 4.695227466 HCC,Normal NA NA boxplot RP11-321E2.2 NA chr5 17518366 17518960 + 595 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-321E2.2 NA 0.024 40-50% NA NA HCC,PAAD NA NA boxplot AC011239.2 NA chr2 23616499 23617987 - 1489 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC011239.2 NA 0.012 70-80% NA NA Breast_cancer,Normal NA NA boxplot RP1-41C23.4 NA chr17 31560132 31560573 + 442 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-41C23.4 NA 0.024 80-90% NA NA PAAD NA NA boxplot RP11-55K13.1 NA chr16 81310731 81313423 - 2693 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-55K13.1 NA 0.047 60-70% NA NA Breast_cancer,CRC,Normal NA NA boxplot RP11-448G15.3 NA chr4 10068089 10073019 - 4931 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-448G15.3 NA 0.341 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot IPO7P1 importin 7 pseudogene 1 chrX 51921864 51922499 - 636 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=IPO7P1 NA 0.012 80-90% NA NA CHD,Normal NA NA boxplot RP11-326E22.1 NA chr8 71155457 71204223 + 48767 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-326E22.1 NA 0.024 50-60% Testis 3.528837253 Breast_cancer,PAAD NA NA boxplot RP11-390B4.3 NA chr10 17695709 17700232 - 4524 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-390B4.3 NA 0.224 60-70% Testis 1.138284181 CRC,HCC,Normal,PAAD NA NA boxplot RPS15AP38 ribosomal protein S15a pseudogene 38 chr22 36421273 36421644 - 372 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPS15AP38 NA 0.082 90-100% NA NA CRC,HCC,Normal,PAAD NA NA boxplot AC003104.1 NA chr17 42270517 42272683 - 2167 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC003104.1 NA 0.141 10-20% NA NA CRC,HCC,Normal,PAAD NA NA boxplot LINC01122 long intergenic non-protein coding RNA 1122 chr2 58427799 59063766 + 635968 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01122 exo_circ_038369 0.341 70-80% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-380L11.4 NA chr12 123925461 123926083 - 623 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-380L11.4 NA 0.565 10-20% NA NA CRC,HCC,Normal,PAAD PAAD(up) NA boxplot UBE2CP4 ubiquitin conjugating enzyme E2C pseudogene 4 chr15 31420128 31420662 + 535 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=UBE2CP4 NA 0.012 70-80% Brain 4.906892038 Breast_cancer,CRC NA NA boxplot RP11-342K6.1 NA chr2 75660462 75662208 + 1747 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-342K6.1 NA 0.835 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down) NA boxplot RP11-364L4.1 NA chr4 143349275 143350117 - 843 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-364L4.1 NA 0.153 90-100% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot RP3-425C14.5 NA chr6 122471923 122484161 + 12239 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-425C14.5 NA 0.047 30-40% NA NA CRC,Normal NA NA boxplot RP11-103H7.5 NA chr8 126556896 126557433 + 538 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-103H7.5 NA 0.118 70-80% NA NA CRC,HCC,Normal,PAAD NA NA boxplot NACA3P NACA family member 3 pseudogene chr4 164943290 164943937 + 648 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NACA3P NA 0.012 90-100% NA NA HCC NA NA boxplot RP11-760H22.2 NA chr8 120052180 120056201 + 4022 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-760H22.2 NA 0.506 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot AC009542.2 NA chr7 135198401 135209837 + 11437 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC009542.2 NA 0.047 60-70% NA NA CRC,Normal NA NA boxplot CTD-2521M24.6 NA chr19 17414257 17422324 - 8068 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2521M24.6 NA 0.059 90-100% NA NA Normal NA NA boxplot AC079135.1 NA chr2 236167447 236294927 + 127481 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC079135.1 NA 0.024 10-20% Heart 3.993459287 Breast_cancer,PAAD NA NA boxplot LINC01307 long intergenic non-protein coding RNA 1307 chr1 101323337 101390303 + 66967 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01307 NA 0.059 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-737O24.1 NA chr18 2967018 2985410 + 18393 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-737O24.1 NA 0.035 40-50% Testis 3.916870166 Breast_cancer,HCC,PAAD NA NA boxplot RP11-256L6.2 NA chr12 96025323 96027971 + 2649 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-256L6.2 NA 0.224 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CTC-512J12.4 NA chr19 44392439 44448452 - 56014 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-512J12.4 NA 0.235 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CTD-2531D15.5 NA chr11 62391516 62393372 - 1857 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2531D15.5 NA 0.529 10-20% NA NA CRC,HCC,Normal,PAAD NA NA boxplot PPBPP1 pro-platelet basic protein pseudogene 1 chr4 73847866 73848829 + 964 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PPBPP1 NA 0.224 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-269F21.3 NA chr4 111826881 112072698 - 245818 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-269F21.3 NA 0.047 50-60% Testis 4.906892038 Breast_cancer,HCC,PAAD NA NA boxplot RP11-120E11.2 NA chr14 93334528 93335057 + 530 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-120E11.2 NA 0.188 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot AC117490.2 NA chr3 196452996 196453055 - 60 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC117490.2 NA 0.012 90-100% NA NA CRC NA NA boxplot CTD-2026K11.2 NA chr15 75636139 75639239 + 3101 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2026K11.2 NA 0.082 50-60% Testis 4.832256664 HCC,Normal,PAAD NA NA boxplot LA16c-306A4.2 NA chr16 898967 905224 - 6258 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LA16c-306A4.2 NA 0.047 50-60% NA NA Breast_cancer,CRC,Normal NA NA boxplot RP11-958F21.1 NA chr18 24933487 24987682 - 54196 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-958F21.1 NA 0.329 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot EPHA1-AS1 EPHA1 antisense RNA 1 chr7 143407813 143523449 + 115637 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=EPHA1-AS1 NA 0.682 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP1-199J3.5 NA chr6 99575712 99576456 + 745 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-199J3.5 NA 0.153 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot HCG14 HLA complex group 14 (non-protein coding) chr6 28896530 28897322 + 793 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HCG14 NA 0.071 50-60% Testis 1.075947693 CRC,HCC,Normal NA NA boxplot CTB-58E17.1 NA chr17 38702452 38704747 + 2296 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTB-58E17.1 NA 0.682 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-126K1.6 NA chr1 151346967 151348027 + 1061 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-126K1.6 NA 0.541 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot PIK3IP1-AS1 PIK3IP1 antisense RNA 1 (head to head) chr22 31292499 31338021 + 45523 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PIK3IP1-AS1 NA 0.188 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot ERHP1 enhancer of rudimentary homolog (Drosophila) pseudogene 1 chr7 139534240 139534549 + 310 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ERHP1 NA 0.012 90-100% Brain 4.906892038 Normal NA NA boxplot RBBP4P2 retinoblastoma binding protein 4 pseudogene 2 chr3 94075912 94077175 - 1264 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RBBP4P2 NA 0.729 40-50% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-252E2.2 NA chr16 75119558 75144200 + 24643 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-252E2.2 NA 0.024 0-10% Liver 4.747342485 Normal NA NA boxplot AC108479.2 NA chr2 87972656 87973082 + 427 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC108479.2 NA 0.282 70-80% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-290L1.6 NA chr12 75926213 75926467 + 255 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-290L1.6 NA 0.012 30-40% NA NA Breast_cancer,HCC NA NA boxplot AC002398.11 NA chr19 35747057 35753415 - 6359 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC002398.11 NA 0.247 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-159M11.2 NA chr1 116013813 116017705 - 3893 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-159M11.2 NA 0.012 50-60% Testis 4.707098298 Normal,PAAD NA NA boxplot PARD6G-AS1 PARD6G antisense RNA 1 chr18 80147924 80178432 + 30509 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PARD6G-AS1 NA 0.153 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot PTMAP5 prothymosin, alpha pseudogene 5 chr13 81689911 81691072 + 1162 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PTMAP5 NA 1 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down) NA boxplot AF124730.4 NA chr21 29182027 29187795 - 5769 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AF124730.4 NA 0.035 70-80% NA NA Normal NA NA boxplot AC026150.8 NA chr15 30540093 30545969 + 5877 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC026150.8 NA 0.682 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-297L17.6 NA chr16 52655307 52656045 + 739 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-297L17.6 NA 0.929 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP3-368A4.5 NA chrX 74200229 74242148 - 41920 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-368A4.5 NA 0.906 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down),PAAD(up) NA boxplot HNRNPLP1 heterogeneous nuclear ribonucleoprotein L pseudogene 1 chr6 7481094 7482594 - 1501 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HNRNPLP1 NA 0.318 80-90% Skin 4.906892038 Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-1223D19.6 NA chr2 110335525 110348944 + 13420 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1223D19.6 NA 0.012 90-100% NA NA Breast_cancer,CRC NA NA boxplot GTF2IP23 NA chr7 66880708 66882981 + 2274 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GTF2IP23 NA 0.341 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CTC-471F3.5 NA chr19 40023384 40025502 - 2119 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-471F3.5 NA 0.306 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot MZF1-AS1 MZF1 antisense RNA 1 chr19 58559129 58574797 + 15669 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MZF1-AS1 NA 0.659 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-96C23.14 NA chr10 86993432 87024732 + 31301 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-96C23.14 NA 0.071 50-60% NA NA Normal NA NA boxplot RP11-47P18.1 NA chr3 80761042 80788963 - 27922 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-47P18.1 NA 0.271 10-20% Testis 4.906892038 CRC,HCC,Normal,PAAD NA NA boxplot RP11-95I16.4 NA chr10 120879256 120880667 - 1412 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-95I16.4 NA 0.012 80-90% NA NA HCC NA NA boxplot ATP2A1-AS1 ATP2A1 antisense RNA 1 chr16 28878957 28879920 - 964 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ATP2A1-AS1 NA 0.294 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-756H6.1 NA chr12 57431116 57433935 + 2820 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-756H6.1 NA 0.035 20-30% Testis 4.158952876 Breast_cancer,CRC,PAAD NA NA boxplot RP11-159D12.3 NA chr17 57988180 57988760 + 581 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-159D12.3 NA 0.024 70-80% NA NA Breast_cancer,Normal NA NA boxplot RP11-1217F2.1 NA chr7 57147986 57150347 - 2362 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1217F2.1 NA 0.247 70-80% Testis 3.236966174 CRC,HCC,Normal,PAAD NA NA boxplot TTC3P1 tetratricopeptide repeat domain 3 pseudogene 1 chrX 75740831 75746911 - 6081 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TTC3P1 NA 0.941 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down),CRC(down),PAAD(down) NA boxplot RP11-501C14.9 NA chr17 48899131 48899748 + 618 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-501C14.9 NA 0.035 80-90% NA NA Breast_cancer,Normal NA NA boxplot XXbac-B476C20.9 NA chr22 18076527 18078884 - 2358 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=XXbac-B476C20.9 NA 0.259 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RAC1P2 ras-related C3 botulinum toxin substrate 1 pseudogene 2 chr4 46723830 46724408 - 579 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RAC1P2 NA 1 0-10% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-326J18.1 NA chr3 115658533 115661279 + 2747 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-326J18.1 NA 0.012 60-70% NA NA Breast_cancer,PAAD NA NA boxplot RP11-27G14.4 NA chr1 201399633 201401190 + 1558 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-27G14.4 NA 0.059 60-70% NA NA Breast_cancer,HCC,PAAD NA NA boxplot RP1-28H20.3 NA chr20 46689659 46690289 + 631 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-28H20.3 NA 0.082 40-50% NA NA CRC,HCC,Normal NA NA boxplot CTD-2330J20.2 NA chr15 58065225 58071043 + 5819 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2330J20.2 NA 0.094 30-40% NA NA Breast_cancer,Normal,PAAD NA NA boxplot RP11-1D12.2 NA chr8 64801236 64817573 - 16338 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1D12.2 exo_circ_010510,exo_circ_055712 0.188 10-20% Testis 1.137013754 CRC,HCC,Normal NA NA boxplot RP11-69M1.6 NA chr12 8080381 8082163 - 1783 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-69M1.6 NA 0.094 30-40% NA NA CRC,HCC,Normal NA NA boxplot RP11-25I15.3 NA chr12 42692216 42717119 + 24904 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-25I15.3 NA 0.012 80-90% Testis 4.081088303 NA NA NA boxplot RP11-150O12.3 NA chr8 37597480 37599858 - 2379 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-150O12.3 NA 0.082 30-40% Small Intestine 1.500586546 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-60L3.6 NA chr15 74311516 74319688 - 8173 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-60L3.6 NA 0.012 70-80% NA NA PAAD NA NA boxplot DUX4L9 double homeobox 4 like 9 chr4 190021407 190022665 - 1259 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DUX4L9 NA 0.024 30-40% NA NA Breast_cancer,HCC NA NA boxplot RP11-154H12.2 NA chr18 79787121 79791432 + 4312 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-154H12.2 NA 0.012 30-40% Testis 4.704684721 PAAD NA NA boxplot MRPS10P2 mitochondrial ribosomal protein S10 pseudogene 2 chr3 4414580 4414960 - 381 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MRPS10P2 NA 0.071 80-90% NA NA CRC,Normal NA NA boxplot RPL21P38 ribosomal protein L21 pseudogene 38 chr2 171587093 171587259 + 167 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL21P38 NA 0.012 0-10% NA NA HCC NA NA boxplot RP11-190I17.2 NA chr18 5159332 5171026 + 11695 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-190I17.2 NA 0.035 20-30% Brain 4.906892038 Breast_cancer,CRC,Normal,PAAD NA NA boxplot MNX1-AS1 MNX1 antisense RNA 1 (head to head) chr7 157010805 157016426 + 5622 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MNX1-AS1 NA 0.035 30-40% NA NA Breast_cancer,CRC,PAAD NA NA boxplot RP11-504G3.2 NA chr11 18601882 18602649 + 768 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-504G3.2 NA 0.024 60-70% NA NA Breast_cancer,PAAD NA NA boxplot CTD-2323K18.1 NA chr15 75527150 75601205 - 74056 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2323K18.1 exo_circ_034437 0.376 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot JHDM1D-AS1 JHDM1D antisense RNA 1 (head to head) chr7 140177261 140179640 + 2380 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=JHDM1D-AS1 NA 0.976 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down) NA boxplot CTD-2566J3.2 NA chr14 68113706 68114144 - 439 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2566J3.2 NA 0.012 20-30% NA NA Normal NA NA boxplot RP11-653J6.1 NA chr15 66278498 66293357 - 14860 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-653J6.1 NA 0.035 60-70% Testis 2.615776624 HCC,Normal NA NA boxplot U47924.27 NA chr12 6963246 6964447 + 1202 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=U47924.27 NA 0.035 50-60% Pituitary 1.508749716 HCC NA NA boxplot RP11-294N21.2 NA chr18 35082009 35082242 + 234 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-294N21.2 NA 0.012 90-100% NA NA Normal NA NA boxplot AF228730.8 NA chr8 7112314 7113728 - 1415 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AF228730.8 NA 0.012 40-50% Brain 4.906892038 Normal NA NA boxplot LINC01569 long intergenic non-protein coding RNA 1569 chr16 4245825 4253789 - 7965 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01569 NA 0.541 20-30% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up) NA boxplot RP11-73B2.6 NA chr7 63924787 63926306 - 1520 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-73B2.6 NA 0.153 60-70% Testis 1.337033671 CRC,HCC,Normal,PAAD NA NA boxplot RP11-227G15.8 NA chr17 32411217 32412420 + 1204 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-227G15.8 NA 0.035 90-100% NA NA CRC NA NA boxplot RP11-203H19.2 NA chr3 126432796 126434569 - 1774 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-203H19.2 NA 0.059 70-80% NA NA Breast_cancer,CRC,HCC NA NA boxplot AF196972.9 NA chrX 48506523 48508838 - 2316 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AF196972.9 NA 0.141 70-80% NA NA CRC,HCC,Normal NA NA boxplot LINC00278 long intergenic non-protein coding RNA 278 chrY 3002912 3102272 + 99361 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00278 NA 0.506 0-10% NA NA CHD,CRC,HCC,Normal,PAAD CHD(down),HCC(up),PAAD(down) NA boxplot CTD-2314B22.2 NA chr14 19154134 19155089 + 956 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2314B22.2 NA 0.012 90-100% NA NA NA NA NA boxplot RP11-317N8.3 NA chr14 35873857 35875303 + 1447 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-317N8.3 NA 0.012 60-70% Brain 2.24779228 HCC NA NA boxplot RP4-760C5.3 NA chr20 26008791 26010531 - 1741 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-760C5.3 NA 0.024 80-90% NA NA Normal NA NA boxplot FRMD6-AS1 FRMD6 antisense RNA 1 chr14 51649516 51651744 - 2229 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FRMD6-AS1 NA 0.035 60-70% NA NA Breast_cancer,CRC,HCC,PAAD NA NA boxplot RP11-576I22.2 NA chr1 170460453 170532647 - 72195 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-576I22.2 NA 0.212 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC004870.5 NA chr7 47052793 47053674 + 882 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC004870.5 NA 0.024 60-70% Testis 1.723966497 Breast_cancer,HCC,PAAD NA NA boxplot RP11-399B17.1 NA chr2 112188364 112190635 + 2272 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-399B17.1 NA 0.365 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot LINC00216 long intergenic non-protein coding RNA 216 chr14 58288033 58289158 + 1126 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00216 NA 0.082 50-60% NA NA HCC,Normal NA NA boxplot DNAJB3 DnaJ heat shock protein family (Hsp40) member B3 chr2 233742750 233744015 - 1266 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DNAJB3 NA 0.024 70-80% Testis 4.615268024 Breast_cancer,PAAD NA NA boxplot LA16c-444G7.1 NA chr16 88234785 88302511 + 67727 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LA16c-444G7.1 NA 0.012 90-100% Ovary 3.519385285 Breast_cancer,Normal NA NA boxplot SNX19P3 sorting nexin 19 pseudogene 3 chr18 14629832 14632806 - 2975 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SNX19P3 NA 0.024 80-90% NA NA Breast_cancer,CRC NA NA boxplot CTA-363E6.5 NA chr16 19410729 19411662 - 934 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTA-363E6.5 NA 0.012 80-90% Salivary Gland 4.906892038 Breast_cancer,HCC NA NA boxplot MTND2P28 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 2 pseudogene 28 chr1 629640 630683 + 1044 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MTND2P28 NA 1 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up),CRC(up),HCC(up),PAAD(up) NA boxplot RP11-96L7.2 NA chr9 99183373 99184891 + 1519 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-96L7.2 NA 0.012 80-90% Testis 4.906892038 Breast_cancer NA NA boxplot LA16c-360H6.3 NA chr16 3307573 3308393 - 821 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LA16c-360H6.3 NA 0.071 60-70% NA NA HCC,Normal,PAAD NA NA boxplot MTND2P19 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 2 pseudogene 19 chr2 140217651 140220368 - 2718 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MTND2P19 NA 0.012 80-90% NA NA NA NA NA boxplot CYP4F25P cytochrome P450 family 4 subfamily F member 25, pseudogene chr9 64465463 64466498 + 1036 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CYP4F25P NA 0.106 70-80% Testis 2.440150437 CRC,HCC,PAAD NA NA boxplot AC008697.1 NA chr5 159310933 159805536 + 494604 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC008697.1 NA 0.212 30-40% Pituitary 2.557364447 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot SOX21-AS1 SOX21 antisense RNA 1 (head to head) chr13 94712716 94716246 + 3531 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SOX21-AS1 NA 0.259 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-91H12.4 NA chr5 175906939 175958538 - 51600 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-91H12.4 NA 0.059 60-70% Pituitary 4.233482924 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-762I7.4 NA chr12 55761550 55762628 - 1079 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-762I7.4 NA 0.059 50-60% NA NA CRC,HCC,PAAD NA NA boxplot LA16c-395F10.1 NA chr16 1625628 1626160 - 533 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LA16c-395F10.1 NA 0.153 40-50% Testis 4.323360306 Breast_cancer,Normal,PAAD NA NA boxplot AC026271.5 NA chr17 18650195 18651542 + 1348 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC026271.5 NA 0.929 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-182N22.7 NA chr9 35147410 35149184 - 1775 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-182N22.7 NA 0.024 90-100% Testis 3.49575221 Normal,PAAD NA NA boxplot RP11-376P6.3 NA chr18 8154558 8155070 + 513 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-376P6.3 NA 0.012 90-100% NA NA NA NA NA boxplot RP11-130L8.3 NA chr2 20529467 20529976 - 510 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-130L8.3 NA 0.447 70-80% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot THAP7-AS1 THAP7 antisense RNA 1 chr22 21001886 21010342 + 8457 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=THAP7-AS1 NA 0.671 20-30% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-48B14.1 NA chr17 3665220 3665702 + 483 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-48B14.1 NA 0.235 90-100% NA NA CRC,HCC,Normal,PAAD NA NA boxplot MYL6P4 myosin light chain 6 pseudogene 4 chr7 141811805 141812257 + 453 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MYL6P4 NA 0.012 90-100% NA NA NA NA NA boxplot RP11-640N11.2 NA chr11 120867933 120894797 - 26865 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-640N11.2 NA 0.012 80-90% Testis 2.596424827 Breast_cancer,Normal NA NA boxplot RP11-383B4.4 NA chr10 18531849 18533336 - 1488 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-383B4.4 NA 0.071 40-50% NA NA CRC,Normal,PAAD NA NA boxplot TTLL10-AS1 TTLL10 antisense RNA 1 chr1 1173056 1179555 - 6500 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TTLL10-AS1 NA 0.035 40-50% Testis 2.733412717 Breast_cancer,CRC,HCC,Normal NA NA boxplot XXbac-BPG16N22.5 NA chr6 31515979 31516211 + 233 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=XXbac-BPG16N22.5 NA 0.012 50-60% NA NA Breast_cancer,PAAD NA NA boxplot RP11-428J1.2 NA chr6 4979072 4979494 + 423 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-428J1.2 exo_circ_055225 0.012 0-10% Bladder 4.906892038 PAAD NA NA boxplot AC068831.15 NA chr15 90920218 90921186 - 969 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC068831.15 NA 0.447 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot POM121L1P POM121 transmembrane nucleoporin like 1, pseudogene chr22 22639177 22644473 - 5297 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=POM121L1P NA 0.012 70-80% Testis 4.778416111 Breast_cancer,Normal NA NA boxplot RP11-10G15.4 NA chr3 121356991 121357940 + 950 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-10G15.4 NA 0.012 70-80% Brain 4.906892038 PAAD NA NA boxplot LL21NC02-1C16.2 NA chr21 44936303 44936954 + 652 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LL21NC02-1C16.2 NA 0.376 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-118E18.1 NA chr17 57531769 57532355 + 587 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-118E18.1 NA 0.047 30-40% NA NA Breast_cancer,CRC,Normal NA NA boxplot CTD-2192J16.21 NA chr19 12529768 12532973 - 3206 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2192J16.21 NA 0.106 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP4-694B14.8 NA chr20 25680781 25681246 + 466 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-694B14.8 NA 0.071 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-162G10.1 NA chr10 37818606 37820982 - 2377 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-162G10.1 NA 0.094 70-80% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-30P6.6 NA chr6 85387219 85390186 - 2968 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-30P6.6 NA 0.071 40-50% NA NA Breast_cancer,HCC NA NA boxplot INTS6L-AS1 INTS6L antisense RNA 1 chrX 135520083 135520674 - 592 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=INTS6L-AS1 NA 0.024 30-40% NA NA CRC,HCC,Normal NA NA boxplot LINC00092 long intergenic non-protein coding RNA 92 chr9 96019732 96027965 - 8234 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00092 NA 0.388 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CD27-AS1 CD27 antisense RNA 1 chr12 6439001 6451567 - 12567 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CD27-AS1 NA 0.929 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down) NA boxplot HSPC324 uncharacterized LOC101928612 chr9 136648610 136660421 - 11812 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HSPC324 NA 0.447 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot TTC21B-AS1 TTC21B antisense RNA 1 chr2 165933857 165949891 + 16035 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TTC21B-AS1 NA 0.047 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot DSG1-AS1 DSG1 antisense RNA 1 chr18 31343368 31426988 - 83621 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DSG1-AS1 NA 0.024 80-90% NA NA HCC NA NA boxplot LETM1P2 leucine zipper-EF-hand containing transmembrane protein 1, pseudogene 2 chr19 58044592 58046769 + 2178 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LETM1P2 NA 0.012 70-80% Testis 2.685886537 Breast_cancer,HCC NA NA boxplot FAM223B family with sequence similarity 223 member B (non-protein coding) chrX 154632470 154633182 - 713 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FAM223B NA 0.153 80-90% NA NA CHD,CRC,HCC,PAAD NA NA boxplot C8orf31 chromosome 8 open reading frame 31 chr8 143039209 143059942 + 20734 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=C8orf31 NA 0.365 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot PTOV1-AS2 PTOV1 antisense RNA 2 chr19 49856970 49859289 - 2320 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PTOV1-AS2 NA 0.682 20-30% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP5-1142A6.10 NA chr16 88708956 88710437 - 1482 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-1142A6.10 NA 0.129 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot INAFM2 InaF-motif containing 2 chr15 40325216 40326715 + 1500 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=INAFM2 NA 1 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot SMG1P6 SMG1 pseudogene 6 chr16 29425800 29447026 - 21227 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SMG1P6 NA 0.847 0-10% NA NA CHD,CRC,HCC,Normal,PAAD CHD(down),CRC(up),HCC(up),PAAD(up) NA boxplot RPS3AP3 ribosomal protein S3A pseudogene 3 chr20 37021743 37021984 - 242 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPS3AP3 NA 0.024 30-40% NA NA Normal,PAAD NA NA boxplot RP11-259G18.1 NA chr17 46267037 46268694 + 1658 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-259G18.1 NA 0.024 90-100% NA NA HCC NA NA boxplot RP11-261C10.7 NA chr1 243054861 243056394 - 1534 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-261C10.7 NA 0.035 30-40% Testis 1.682624977 Breast_cancer,HCC,PAAD NA NA boxplot CTC-429P9.1 NA chr19 16630743 16643942 + 13200 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-429P9.1 NA 0.118 40-50% NA NA HCC,Normal,PAAD NA NA boxplot RP11-54F2.9 NA chr5 10541454 10543192 + 1739 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-54F2.9 NA 0.094 80-90% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CTC-455F18.1 NA chr5 170747047 170788650 - 41604 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-455F18.1 NA 0.118 10-20% NA NA CRC,HCC,Normal NA NA boxplot RP11-100G15.7 NA chr9 92132398 92138629 + 6232 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-100G15.7 NA 0.012 20-30% NA NA Breast_cancer,PAAD NA NA boxplot AC018755.16 NA chr19 51594561 51606150 + 11590 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC018755.16 NA 0.588 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-245P10.4 NA chr1 228407381 228409694 + 2314 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-245P10.4 NA 0.118 70-80% NA NA CRC,Normal,PAAD NA NA boxplot CRNDE colorectal neoplasia differentially expressed (non-protein coding) chr16 54845189 54929189 - 84001 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CRNDE NA 0.506 10-20% Testis 1.500757039 Breast_cancer,CHD,CRC,HCC,Normal,PAAD PAAD(up) Yes boxplot PCNPP3 PEST containing nuclear protein pseudogene 3 chr12 65645992 65646462 - 471 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PCNPP3 NA 0.012 90-100% Testis 4.162567428 Breast_cancer,CHD,PAAD NA NA boxplot SNRPGP14 small nuclear ribonucleoprotein polypeptide G pseudogene 14 chr13 49488970 49489364 + 395 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SNRPGP14 NA 0.035 80-90% NA NA CRC,HCC NA NA boxplot RBMS1P1 RNA binding motif, single stranded interacting protein 1 pseudogene 1 chr12 66234079 66235234 - 1156 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RBMS1P1 NA 0.976 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down),CRC(down),PAAD(down) NA boxplot AP000962.2 NA chr21 16574718 16582637 - 7920 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AP000962.2 NA 0.012 90-100% NA NA HCC NA NA boxplot RP11-1430O6.1 NA chr7 155222903 155223851 + 949 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1430O6.1 NA 0.012 30-40% NA NA Breast_cancer NA NA boxplot RP3-406A7.7 NA chr6 136335714 136336087 - 374 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-406A7.7 NA 0.035 50-60% NA NA HCC,PAAD NA NA boxplot RP1-239B22.5 NA chr11 17380649 17383531 + 2883 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-239B22.5 NA 0.2 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD PAAD(up) NA boxplot LRRC37A4P leucine-rich repeat containing 37 member A4, pseudogene chr17 45506741 45550335 - 43595 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LRRC37A4P NA 1 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up),CRC(up),HCC(up),PAAD(up) NA boxplot RP3-469D22.1 NA chr1 25398721 25399198 + 478 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-469D22.1 NA 0.753 20-30% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(down),PAAD(down) NA boxplot RP11-247A12.7 NA chr9 129170434 129170940 + 507 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-247A12.7 NA 0.012 70-80% NA NA NA NA NA boxplot KRT8P8 keratin 8 pseudogene 8 chrX 152479577 152481024 + 1448 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KRT8P8 NA 0.012 90-100% NA NA PAAD NA NA boxplot AC004490.1 NA chr19 2212029 2215565 - 3537 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC004490.1 NA 0.306 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CTC-205M6.1 NA chr5 180810401 180811384 + 984 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-205M6.1 NA 0.129 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot HLA-U major histocompatibility complex, class I, U (pseudogene) chr6 29934101 29934286 + 186 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HLA-U NA 0.082 20-30% NA NA CRC,Normal,PAAD NA NA boxplot RP11-7F17.5 NA chr14 77041064 77069503 + 28440 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-7F17.5 NA 0.094 60-70% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot RP11-397J20.1 NA chr7 7078302 7079742 - 1441 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-397J20.1 NA 0.012 90-100% Testis 4.906892038 PAAD NA NA boxplot RP5-994D16.3 NA chr1 42678735 42681659 + 2925 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-994D16.3 NA 0.059 70-80% NA NA HCC,Normal,PAAD NA NA boxplot RP11-430E17.1 NA chr18 28146233 28146703 - 471 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-430E17.1 NA 0.012 90-100% NA NA NA NA NA boxplot FAM87A family with sequence similarity 87 member A chr8 375931 383174 - 7244 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FAM87A NA 0.082 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-543P15.1 NA chr12 3211663 3211917 - 255 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-543P15.1 NA 0.929 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down) NA boxplot HNRNPA1P4 heterogeneous nuclear ribonucleoprotein A1 pseudogene 4 chr8 82291624 82292379 - 756 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HNRNPA1P4 NA 0.965 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot RP11-576C2.1 NA chrY 19598188 19598757 + 570 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-576C2.1 NA 0.024 10-20% NA NA CRC NA NA boxplot FRG1HP FSHD region gene 1 family member H, pseudogene chr9 40992249 41218410 + 226162 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FRG1HP NA 0.929 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP3-355L5.3 NA chr6 105298149 105298895 + 747 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-355L5.3 NA 0.012 80-90% NA NA Breast_cancer,HCC NA NA boxplot AC005740.5 NA chr5 141970637 141982687 - 12051 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC005740.5 NA 0.071 40-50% NA NA HCC,Normal NA NA boxplot CTC-490G23.2 NA chr19 43329295 43331430 - 2136 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-490G23.2 NA 0.635 10-20% Whole Blood 3.987969338 CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(up) NA boxplot AC007285.6 NA chr7 29988600 30025660 + 37061 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC007285.6 NA 0.224 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CECR5-AS1 CECR5 antisense RNA 1 chr22 17159384 17165445 + 6062 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CECR5-AS1 NA 0.035 40-50% NA NA HCC,Normal NA NA boxplot RP11-245P10.8 NA chr1 228394290 228396967 + 2678 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-245P10.8 NA 0.129 70-80% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot ZNF674-AS1 ZNF674 antisense RNA 1 (head to head) chrX 46545493 46548408 + 2916 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ZNF674-AS1 NA 0.541 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot LINC01589 long intergenic non-protein coding RNA 1589 chr22 45604432 45605621 - 1190 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01589 NA 0.059 90-100% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot RP11-259G18.2 NA chr17 46243606 46245044 + 1439 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-259G18.2 NA 0.012 0-10% Testis 3.315822639 Breast_cancer,HCC NA NA boxplot IL10RB-AS1 IL10RB antisense RNA 1 (head to head) chr21 33263873 33266260 - 2388 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=IL10RB-AS1 NA 0.659 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down) NA boxplot DPYD-AS1 DPYD antisense RNA 1 chr1 97095923 97322955 + 227033 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DPYD-AS1 NA 0.012 90-100% Nerve 4.906892038 HCC,Normal NA NA boxplot R3HDM2P2 R3H domain containing 2 pseudogene 2 chr6 104017633 104019748 - 2116 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=R3HDM2P2 NA 0.024 50-60% Testis 4.906892038 Breast_cancer,HCC,Normal NA NA boxplot FRG1FP NA chr22 10939388 10961338 - 21951 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FRG1FP NA 0.024 90-100% NA NA Normal NA NA boxplot YBX1P2 Y-box binding protein 1 pseudogene 2 chr7 105582258 105583256 - 999 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=YBX1P2 NA 0.918 40-50% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-139K1.2 NA chr10 112987476 112987865 + 390 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-139K1.2 NA 0.118 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-415F23.2 NA chr3 16314439 16314987 + 549 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-415F23.2 NA 0.188 60-70% NA NA CRC,Normal,PAAD NA NA boxplot EIF2S2P4 eukaryotic translation initiation factor 2 subunit 2 beta pseudogene 4 chr2 170751805 170752788 + 984 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=EIF2S2P4 NA 1 0-10% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-14I17.1 NA chr8 26433029 26434065 - 1037 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-14I17.1 exo_circ_050209 0.035 90-100% NA NA Normal NA NA boxplot CTD-2026G22.1 NA chr11 49305714 49379669 + 73956 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2026G22.1 NA 0.012 80-90% NA NA HCC,PAAD NA NA boxplot BNIP3P11 BCL2/adenovirus E1B 19kDa interacting protein 3 pseudogene 11 chr7 64678954 64687393 - 8440 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=BNIP3P11 NA 0.071 30-40% NA NA CRC,HCC,Normal NA NA boxplot TAB3-AS2 TAB3 antisense RNA 2 chrX 30854321 30854707 + 387 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TAB3-AS2 NA 0.318 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot XXbac-B476C20.13 NA chr22 18004270 18007308 - 3039 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=XXbac-B476C20.13 NA 0.047 50-60% Testis 1.24172544 HCC,PAAD NA NA boxplot RP11-543P15.3 NA chr12 3171657 3174056 + 2400 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-543P15.3 NA 0.012 90-100% NA NA Breast_cancer NA NA boxplot MRPL20P1 mitochondrial ribosomal protein L20 pseudogene 1 chr21 36994643 36995075 + 433 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MRPL20P1 NA 0.012 80-90% Testis 4.906892038 HCC NA NA boxplot MDC1-AS1 MDC1 antisense RNA 1 chr6 30703067 30713184 + 10118 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MDC1-AS1 NA 0.318 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot TBL1XR1-AS1 TBL1XR1 antisense RNA 1 chr3 177037405 177047923 + 10519 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TBL1XR1-AS1 NA 0.059 80-90% NA NA CRC,HCC,Normal,PAAD NA NA boxplot MAN1A2P1 mannosidase, alpha, class 1A, member 2 pseudogene 1 chr19 28790812 28792871 - 2060 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MAN1A2P1 NA 0.012 80-90% NA NA CRC NA NA boxplot RP11-1143G9.4 NA chr12 69353493 69354225 - 733 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1143G9.4 NA 0.894 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot MTATP6P11 mitochondrially encoded ATP synthase 6 pseudogene 11 chr9 5099560 5100229 + 670 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MTATP6P11 NA 0.094 40-50% NA NA CRC,Normal NA NA boxplot RP11-423H2.1 NA chr5 177809407 177950732 + 141326 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-423H2.1 NA 0.918 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(up),PAAD(up) NA boxplot NAMA non-protein coding RNA, associated with MAP kinase pathway and growth arrest chr9 99355337 99377240 - 21904 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NAMA NA 0.012 40-50% Testis 1.214678322 Breast_cancer,PAAD NA NA boxplot WDR45BP1 WD repeat domain 45B pseudogene 1 chr17 32111562 32112590 - 1029 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=WDR45BP1 NA 0.094 80-90% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot RP11-34P13.13 NA chr1 141474 173862 - 32389 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-34P13.13 NA 0.4 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-14C10.5 NA chr15 101613676 101614339 - 664 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-14C10.5 NA 0.012 10-20% NA NA Breast_cancer NA NA boxplot RP11-36N20.1 NA chr1 246108626 246113866 + 5241 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-36N20.1 NA 0.012 50-60% Testis 4.885685753 PAAD NA NA boxplot GS1-114I9.1 NA chr7 30424672 30425412 + 741 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GS1-114I9.1 NA 0.247 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP1-45I4.3 NA chr6 143039425 143042324 - 2900 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-45I4.3 NA 0.071 40-50% NA NA HCC,Normal,PAAD NA NA boxplot RP11-739N20.2 NA chr1 204377850 204435846 + 57997 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-739N20.2 NA 0.012 50-60% NA NA Breast_cancer,HCC NA NA boxplot ZNF192P1 zinc finger protein 192 pseudogene 1 chr6 28161781 28169594 + 7814 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ZNF192P1 NA 0.188 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-441F2.5 NA chr16 56351886 56353524 - 1639 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-441F2.5 NA 0.165 80-90% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot AC010900.2 NA chr2 202924609 202925904 + 1296 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC010900.2 NA 0.082 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot NRBF2P2 nuclear receptor binding factor 2 pseudogene 2 chr3 46023296 46024156 + 861 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NRBF2P2 NA 0.012 90-100% Testis 3.999859527 Breast_cancer,CRC NA NA boxplot RP1-56K13.5 NA chr17 39003248 39013032 - 9785 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-56K13.5 NA 0.012 90-100% NA NA Breast_cancer NA NA boxplot RP11-223C24.1 NA chr4 142566019 142660950 + 94932 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-223C24.1 exo_circ_049236 0.4 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CTC-246B18.8 NA chr19 39314651 39320858 - 6208 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-246B18.8 NA 0.518 40-50% Whole Blood 1.768277873 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AURKAPS1 aurora kinase A pseudogene 1 chr1 220266706 220267917 - 1212 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AURKAPS1 NA 0.129 20-30% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-123O10.4 NA chr12 66891876 67069162 - 177287 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-123O10.4 NA 0.059 30-40% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot RP11-65J3.14 NA chr9 129480605 129482538 - 1934 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-65J3.14 NA 0.024 70-80% Adrenal Gland 1.868707104 Breast_cancer,CRC NA NA boxplot AC006942.4 NA chr19 49808933 49809738 + 806 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC006942.4 NA 0.376 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-390K5.6 NA chr11 47168281 47169563 - 1283 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-390K5.6 NA 0.141 50-60% NA NA Breast_cancer,CRC,Normal NA NA boxplot BMS1P7 BMS1, ribosome biogenesis factor pseudogene 7 chr10 48050282 48060016 - 9735 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=BMS1P7 NA 0.976 0-10% NA NA CHD,CRC,HCC,Normal,PAAD CHD(up),CRC(up),HCC(up),PAAD(up) NA boxplot RP11-649A16.1 NA chr3 146909685 147370656 - 460972 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-649A16.1 NA 0.012 60-70% Brain 4.182594062 HCC NA NA boxplot AC018737.3 NA chr2 121790444 121796702 + 6259 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC018737.3 NA 0.012 80-90% Testis 4.694884575 Breast_cancer NA NA boxplot AC006128.2 NA chr19 15398696 15400356 + 1661 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC006128.2 NA 0.306 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP4-575N6.5 NA chr1 101243158 101243749 + 592 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-575N6.5 NA 0.094 70-80% NA NA CRC,Normal NA NA boxplot CTD-2509G16.5 NA chr14 65236480 65318790 - 82311 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2509G16.5 NA 0.153 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-563K23.1 NA chr7 143363899 143364229 + 331 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-563K23.1 NA 0.012 40-50% Brain 3.478694257 HCC NA NA boxplot RP11-358B23.1 NA chr17 42154600 42155972 + 1373 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-358B23.1 NA 0.035 50-60% NA NA Breast_cancer,CRC,Normal NA NA boxplot RP11-82O19.2 NA chr17 29775747 29776701 - 955 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-82O19.2 exo_circ_034565 0.141 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-335G20.7 NA chr1 25336429 25337465 - 1037 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-335G20.7 NA 0.847 20-30% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(up) NA boxplot RP11-314N13.3 NA chr20 1361622 1362585 + 964 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-314N13.3 NA 0.188 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-98D18.16 NA chr1 151766486 151767000 - 515 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-98D18.16 NA 0.129 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot AC012066.1 NA chr2 152389937 152390630 + 694 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC012066.1 NA 0.118 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC007292.4 NA chr19 4347244 4354057 - 6814 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC007292.4 NA 0.035 70-80% NA NA Normal,PAAD NA NA boxplot NRG1-IT1 NRG1 intronic transcript 1 chr8 32026219 32139475 + 113257 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NRG1-IT1 NA 0.259 10-20% Testis 4.817289616 CRC,HCC,Normal,PAAD NA NA boxplot VDAC1P13 voltage-dependent anion channel 1 pseudogene 13 chr2 42463139 42463997 - 859 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=VDAC1P13 NA 0.012 30-40% NA NA NA NA NA boxplot RP11-439K3.1 NA chr9 83219331 83234242 + 14912 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-439K3.1 NA 0.224 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-197K6.1 NA chr3 191557324 191590356 + 33033 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-197K6.1 NA 0.012 60-70% NA NA NA NA NA boxplot RPL36AP48 ribosomal protein L36a pseudogene 48 chr17 67224728 67225041 + 314 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL36AP48 NA 0.012 10-20% Testis 4.906892038 PAAD NA NA boxplot AP001062.9 NA chr21 44339376 44340470 + 1095 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AP001062.9 NA 0.047 70-80% NA NA CRC,Normal NA NA boxplot AC083873.4 NA chr7 133169416 133170514 - 1099 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC083873.4 NA 0.929 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down) NA boxplot VDAC1P4 voltage-dependent anion channel 1 pseudogene 4 chr1 180434800 180435936 + 1137 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=VDAC1P4 NA 0.024 80-90% NA NA CHD,PAAD NA NA boxplot RP11-178L8.9 NA chr16 87362536 87367476 + 4941 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-178L8.9 NA 0.012 90-100% NA NA Breast_cancer,HCC NA NA boxplot RP11-424M22.1 NA chr12 16513445 16514371 + 927 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-424M22.1 NA 0.024 20-30% NA NA Breast_cancer,PAAD NA NA boxplot RP11-21L23.4 NA chr11 76759916 76768223 - 8308 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-21L23.4 NA 0.012 70-80% NA NA NA NA NA boxplot AC007405.4 NA chr2 170723086 170770768 - 47683 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC007405.4 NA 0.094 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-161H23.5 NA chr12 49265156 49273306 - 8151 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-161H23.5 NA 0.871 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot RP11-22H5.2 NA chr16 82773319 82829638 + 56320 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-22H5.2 NA 0.024 10-20% NA NA Breast_cancer,PAAD NA NA boxplot LINC01301 long intergenic non-protein coding RNA 1301 chr8 60384588 60516795 - 132208 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01301 NA 0.141 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AP000705.8 NA chr21 22134698 22136083 - 1386 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AP000705.8 NA 0.012 30-40% NA NA NA NA NA boxplot RP11-1223D19.1 NA chr2 110231106 110272050 + 40945 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1223D19.1 NA 0.388 60-70% Testis 3.550761841 CRC,HCC,Normal,PAAD NA NA boxplot RP11-157G21.2 NA chr12 7438780 7439990 - 1211 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-157G21.2 NA 0.4 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CHRM3-AS2 CHRM3 antisense RNA 2 chr1 239703381 239730465 - 27085 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CHRM3-AS2 NA 0.647 20-30% Testis 1.870768915 Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot LINC00632 long intergenic non-protein coding RNA 632 chrX 140709767 140772679 + 62913 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00632 NA 0.024 40-50% Pituitary 3.327565244 Breast_cancer,HCC NA NA boxplot DHX9P1 DEAH-box helicase 9 pseudogene 1 chr13 76984868 76987943 + 3076 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DHX9P1 NA 0.318 60-70% NA NA CHD,CRC,HCC,Normal NA NA boxplot RPEP1 ribulose-5-phosphate-3-epimerase pseudogene 1 chr5 65251127 65251784 - 658 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPEP1 NA 0.012 60-70% NA NA NA NA NA boxplot RP11-16P6.1 NA chr2 222566899 222569719 - 2821 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-16P6.1 NA 0.247 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-567L7.3 NA chr17 59362665 59363278 + 614 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-567L7.3 NA 0.059 70-80% NA NA CRC,Normal NA NA boxplot GLRX3P2 glutaredoxin 3 pseudogene 2 chr6 3978062 3979099 + 1038 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GLRX3P2 NA 0.8 10-20% NA NA CHD,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot RP1-152L7.5 NA chr6 52665148 52669155 + 4008 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-152L7.5 NA 0.6 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),HCC(up),PAAD(up) NA boxplot DPPA2P3 developmental pluripotency associated 2 pseudogene 3 chr3 193993331 193993985 - 655 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DPPA2P3 NA 0.035 60-70% NA NA Breast_cancer,CRC,Normal NA NA boxplot RRM1-AS1 RRM1 antisense RNA 1 chr11 4137116 4138257 - 1142 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RRM1-AS1 NA 0.035 60-70% NA NA Breast_cancer,CRC,HCC NA NA boxplot AP003419.16 NA chr11 67431367 67435399 - 4033 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AP003419.16 NA 0.494 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot AC078842.3 NA chr7 137344930 137354483 - 9554 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC078842.3 NA 0.071 80-90% Thyroid 3.047363965 HCC,Normal,PAAD NA NA boxplot AC007163.3 NA chr2 200712305 200735177 - 22873 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC007163.3 NA 0.118 40-50% Brain 3.683381065 Breast_cancer,CRC,HCC,Normal NA NA boxplot RP4-598P13.1 NA chr1 66665864 66677027 - 11164 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-598P13.1 NA 0.012 80-90% NA NA HCC,Normal NA NA boxplot RP11-25C19.3 NA chr10 112671812 112677819 - 6008 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-25C19.3 NA 0.024 20-30% NA NA Breast_cancer,CRC,Normal NA NA boxplot RP1-142L7.5 NA chr6 112154765 112166476 + 11712 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-142L7.5 NA 0.012 10-20% NA NA HCC,Normal NA NA boxplot AC016757.3 NA chr2 238224552 238231677 - 7126 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC016757.3 NA 0.282 40-50% Testis 1.562587774 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CTC-215O4.4 NA chr19 11010917 11016011 - 5095 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-215O4.4 NA 0.024 70-80% NA NA Breast_cancer,HCC,Normal NA NA boxplot RP11-157L3.11 NA chr9 41700682 41701096 + 415 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-157L3.11 NA 0.024 30-40% NA NA CRC NA NA boxplot RP11-449D8.1 NA chr18 24628182 24662198 + 34017 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-449D8.1 NA 0.318 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC004009.3 NA chr7 27361843 27409938 + 48096 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC004009.3 NA 0.012 80-90% Testis 4.452893901 HCC NA NA boxplot RP1-130G2.1 NA chr6 20042455 20042940 - 486 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-130G2.1 NA 0.035 60-70% NA NA CRC,HCC,PAAD NA NA boxplot RP3-323B6.1 NA chrX 65469087 65470380 + 1294 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-323B6.1 NA 0.012 40-50% NA NA Breast_cancer,CRC,HCC NA NA boxplot SUMO2P19 SUMO2 pseudogene 19 chr8 102242040 102242619 - 580 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SUMO2P19 NA 0.012 90-100% NA NA NA NA NA boxplot RP11-420O16.2 NA chr5 20304045 20305448 - 1404 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-420O16.2 NA 0.435 70-80% Testis 4.745903201 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot SCARNA10 small Cajal body-specific RNA 10 chr12 6510275 6510522 + 248 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SCARNA10 NA 0.976 0-10% NA NA CHD,CRC,HCC,Normal,PAAD CHD(up),CRC(up),HCC(down),PAAD(up) NA boxplot C1orf229 chromosome 1 open reading frame 229 chr1 247110160 247112417 - 2258 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=C1orf229 NA 0.035 80-90% NA NA Breast_cancer,Normal,PAAD NA NA boxplot SLC9A9-AS2 SLC9A9 antisense RNA 2 chr3 143381338 143382161 + 824 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SLC9A9-AS2 NA 0.059 20-30% NA NA HCC,Normal NA NA boxplot RP5-1000K24.2 NA chrX 77910741 77964890 + 54150 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-1000K24.2 NA 0.835 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-276M12.1 NA chr15 81953303 81995666 - 42364 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-276M12.1 exo_circ_034440,exo_circ_017121,exo_circ_011205,exo_circ_026862,exo_circ_034441 0.188 10-20% Testis 3.501631375 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-5O17.1 NA chr3 53046166 53048122 + 1957 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-5O17.1 NA 0.176 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CTB-50L17.8 NA chr19 4448810 4450836 + 2027 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTB-50L17.8 NA 0.282 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot HNRNPA3P2 heterogeneous nuclear ribonucleoprotein A3 pseudogene 2 chr20 36620403 36621423 + 1021 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HNRNPA3P2 NA 0.035 90-100% NA NA Breast_cancer,CRC,Normal NA NA boxplot MCRIP2P2 NA chr1 185435839 185436047 + 209 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MCRIP2P2 NA 0.012 30-40% NA NA Normal NA NA boxplot RP3-370M22.8 NA chr22 39960397 39964718 + 4322 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-370M22.8 NA 0.918 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot FAR2P1 fatty acyl-CoA reductase 2 pseudogene 1 chr2 129990456 130051131 - 60676 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FAR2P1 NA 0.059 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-169D4.2 NA chr11 72584572 72587979 + 3408 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-169D4.2 NA 0.871 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down) NA boxplot AC092155.4 NA chr2 62590255 62662654 - 72400 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC092155.4 NA 0.306 10-20% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-131M11.3 NA chr1 33162851 33166298 + 3448 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-131M11.3 NA 0.106 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-7N14.1 NA chr11 72410716 72412079 + 1364 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-7N14.1 NA 0.012 90-100% NA NA HCC NA NA boxplot RP11-822E23.8 NA chr17 21532477 21574517 - 42041 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-822E23.8 NA 0.647 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC005235.1 NA chr2 198299363 198375116 - 75754 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC005235.1 NA 0.353 10-20% Testis 4.306788975 CRC,HCC,Normal,PAAD NA NA boxplot RP11-474P2.6 NA chr12 46388856 46392126 + 3271 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-474P2.6 NA 0.176 50-60% NA NA CRC,Normal,PAAD NA NA boxplot NPHP3-AS1 NPHP3 antisense RNA 1 chr3 132721750 132874223 + 152474 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NPHP3-AS1 NA 0.188 60-70% Testis 2.027617377 Breast_cancer,CHD,CRC,HCC,Normal NA NA boxplot GTF2IP12 NA chr4 119407967 119454638 - 46672 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GTF2IP12 NA 0.682 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CRC(up),PAAD(up) NA boxplot CACNA2D3-AS1 CACNA2D3 antisense RNA 1 chr3 54874605 54901255 - 26651 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CACNA2D3-AS1 NA 0.012 80-90% NA NA Breast_cancer,CRC NA NA boxplot RP11-19E11.1 NA chr2 118833700 118835110 - 1411 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-19E11.1 NA 0.012 20-30% Skin 3.04932238 Breast_cancer,HCC NA NA boxplot RP11-796E2.4 NA chr12 92145573 92189660 + 44088 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-796E2.4 exo_circ_028476 0.929 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot AP001962.3 NA chr4 99844138 99844696 + 559 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AP001962.3 NA 0.082 80-90% NA NA CRC,HCC,Normal NA NA boxplot RP11-142A22.3 NA chr4 145376909 145377957 + 1049 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-142A22.3 NA 0.047 80-90% NA NA CRC,Normal NA NA boxplot HLA-DPA3 major histocompatibility complex, class II, DP alpha 3 (pseudogene) chr6 33131216 33143325 - 12110 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HLA-DPA3 NA 0.035 50-60% NA NA CRC,Normal NA NA boxplot RP11-114H23.1 NA chr12 75563202 75984015 - 420814 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-114H23.1 NA 0.012 10-20% NA NA Breast_cancer NA NA boxplot RP11-256P1.1 NA chr5 138347027 138349641 - 2615 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-256P1.1 NA 0.271 70-80% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-38G5.2 NA chr15 79832466 79833554 - 1089 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-38G5.2 NA 0.047 70-80% NA NA Normal,PAAD NA NA boxplot AC133633.2 NA chr8 2493876 2512580 - 18705 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC133633.2 NA 0.012 80-90% NA NA NA NA NA boxplot RP11-6B19.1 NA chr12 15780068 15782120 + 2053 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-6B19.1 NA 0.012 60-70% Testis 3.97520119 CRC,HCC NA NA boxplot RP11-799O21.2 NA chr10 6891457 6920472 - 29016 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-799O21.2 NA 0.047 50-60% Testis 4.590151796 Breast_cancer,CRC,Normal,PAAD NA NA boxplot AC006960.7 NA chr7 36463023 36504513 + 41491 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC006960.7 NA 0.012 80-90% NA NA NA NA NA boxplot AP000892.6 NA chr11 117204967 117210292 + 5326 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AP000892.6 NA 0.8 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down) NA boxplot SH3BP5-AS1 SH3BP5 antisense RNA 1 chr3 15254184 15264493 + 10310 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SH3BP5-AS1 NA 0.706 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot RP11-96K19.4 NA chr1 110936369 110942353 - 5985 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-96K19.4 NA 0.306 10-20% NA NA CRC,HCC,Normal,PAAD NA NA boxplot EXOC5P1 exocyst complex component 5 pseudogene 1 chr4 62816826 62818794 + 1969 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=EXOC5P1 NA 1 0-10% NA NA CHD,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot LINC01135 long intergenic non-protein coding RNA 1135 chr1 58785160 58899594 + 114435 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01135 NA 0.165 20-30% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot NCAPD2P1 non-SMC condensin I complex subunit D2 pseudogene 1 chr7 34750253 34752053 - 1801 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NCAPD2P1 NA 0.024 60-70% NA NA Breast_cancer,CRC,HCC NA NA boxplot MINCR MYC-induced long noncoding RNA chr8 143280161 143281690 - 1530 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MINCR NA 0.435 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-680G24.4 NA chr16 14988259 14990160 - 1902 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-680G24.4 NA 0.318 70-80% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot ZNF663P zinc finger protein 663, pseudogene chr20 46414228 46459276 - 45049 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ZNF663P NA 0.047 30-40% NA NA CRC,Normal NA NA boxplot LINC00671 long intergenic non-protein coding RNA 671 chr17 42874670 42898704 - 24035 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00671 NA 0.047 10-20% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot TTN-AS1 TTN antisense RNA 1 chr2 178521183 178779963 + 258781 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TTN-AS1 exo_circ_021596,exo_circ_043425,exo_circ_023546,exo_circ_021597,exo_circ_003359,exo_circ_031535,exo_circ_018820,exo_circ_040917,exo_circ_014384,exo_circ_048564,exo_circ_032740,exo_circ_048563 1 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up) NA boxplot KCNC4-AS1 KCNC4 antisense RNA 1 (head to head) chr1 110208834 110209987 - 1154 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KCNC4-AS1 NA 0.094 50-60% Testis 1.028737122 Breast_cancer,CRC,Normal,PAAD NA NA boxplot GS1-124K5.8 NA chr7 66485095 66486532 - 1438 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GS1-124K5.8 NA 0.035 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-265N6.2 NA chr15 42567031 42569994 - 2964 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-265N6.2 NA 0.153 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot TXNP4 thioredoxin pseudogene 4 chr17 4572206 4572515 + 310 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TXNP4 NA 0.059 90-100% NA NA CRC,HCC,PAAD NA NA boxplot CTB-138E5.1 NA chr5 135450613 135458697 + 8085 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTB-138E5.1 NA 0.094 50-60% Testis 4.77309698 CRC,HCC,Normal,PAAD NA NA boxplot RP11-190A12.8 NA chr1 159866954 159867685 + 732 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-190A12.8 NA 0.035 10-20% NA NA Normal,PAAD NA NA boxplot RP1-78O14.1 NA chr12 79341205 79503396 - 162192 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-78O14.1 exo_circ_056708 0.094 10-20% Ovary 1.507650058 Breast_cancer,HCC,Normal NA NA boxplot RP11-847H18.3 NA chr12 34037438 34056740 + 19303 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-847H18.3 NA 0.106 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-452C13.1 NA chr7 157868538 157869154 + 617 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-452C13.1 NA 0.376 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-339F13.2 NA chr7 55244247 55245681 + 1435 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-339F13.2 NA 0.035 20-30% Testis 4.906892038 PAAD NA NA boxplot CTD-2003C8.2 NA chr11 10884885 10899322 - 14438 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2003C8.2 NA 0.012 80-90% Muscle 3.635294095 CRC NA NA boxplot LINC01482 long intergenic non-protein coding RNA 1482 chr17 68591796 68763882 + 172087 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01482 NA 0.024 40-50% NA NA Breast_cancer,CRC,HCC NA NA boxplot RP11-65J3.15 NA chr9 129328261 129328401 + 141 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-65J3.15 NA 0.024 90-100% NA NA Breast_cancer,CRC,Normal NA NA boxplot RP11-189G24.2 NA chr20 22960534 22966063 - 5530 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-189G24.2 NA 0.012 90-100% Testis 4.906892038 Breast_cancer,Normal NA NA boxplot RP11-169K17.4 NA chr3 11607184 11610748 + 3565 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-169K17.4 NA 0.024 70-80% NA NA Breast_cancer,CRC,Normal NA NA boxplot RP11-439A17.4 NA chr1 121118126 121146826 + 28701 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-439A17.4 NA 0.012 80-90% NA NA HCC NA NA boxplot RP11-38L15.2 NA chr10 46597918 46612154 + 14237 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-38L15.2 NA 0.059 80-90% NA NA HCC,Normal NA NA boxplot RP11-426C22.8 NA chr16 29272220 29272772 + 553 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-426C22.8 NA 0.118 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP4-814D15.1 NA chr7 157197600 157198511 - 912 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-814D15.1 NA 0.024 90-100% NA NA HCC,Normal NA NA boxplot RPS20P32 ribosomal protein S20 pseudogene 32 chr13 27017554 27017909 - 356 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPS20P32 NA 0.012 0-10% Spleen 4.906892038 PAAD NA NA boxplot CH17-260O16.1 NA chr17 36274191 36320547 + 46357 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CH17-260O16.1 NA 0.812 10-20% NA NA CRC,HCC,Normal,PAAD CRC(up),HCC(up),PAAD(up) NA boxplot RP4-569D19.8 NA chr22 35526932 35527415 + 484 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-569D19.8 NA 0.012 60-70% NA NA Breast_cancer,CRC NA NA boxplot RP11-160E2.16 NA chr17 19203825 19214045 + 10221 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-160E2.16 NA 0.024 80-90% NA NA CRC,HCC,PAAD NA NA boxplot SNHG20 small nucleolar RNA host gene 20 chr17 77086716 77094990 + 8275 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SNHG20 NA 0.871 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CRC(up) NA boxplot RP11-788M5.4 NA chr11 101129077 101209591 + 80515 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-788M5.4 NA 0.012 70-80% NA NA HCC NA NA boxplot RPL41P5 ribosomal protein L41 pseudogene 5 chr12 93083598 93083675 - 78 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL41P5 NA 1 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD HCC(up),PAAD(down) NA boxplot AC099552.2 NA chr7 155267299 155268052 + 754 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC099552.2 NA 0.259 40-50% Testis 4.906892038 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AL353662.1 NA chr9 34201273 34201515 - 243 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AL353662.1 NA 0.012 90-100% NA NA Breast_cancer,CRC NA NA boxplot RP11-817O13.9 NA chr15 75346744 75347161 - 418 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-817O13.9 NA 0.035 80-90% NA NA CRC,HCC,PAAD NA NA boxplot PDPK2P 3-phosphoinositide dependent protein kinase 2, pseudogene chr16 2616121 2643296 - 27176 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PDPK2P NA 0.976 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up),CRC(up),HCC(up),PAAD(up) NA boxplot RP5-857K21.15 NA chr1 357383 359681 - 2299 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-857K21.15 NA 0.012 60-70% NA NA Normal NA NA boxplot MST1L macrophage stimulating 1-like chr1 16754910 16770237 - 15328 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MST1L NA 0.165 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-2E11.6 NA chr7 130495794 130498427 - 2634 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-2E11.6 NA 0.247 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot SKA2P1 spindle and kinetochore associated complex subunit 2 pseudogene 1 chr9 122761844 122762233 + 390 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SKA2P1 NA 0.882 0-10% NA NA CHD,CRC,HCC,Normal,PAAD CHD(up),HCC(down) NA boxplot AC092159.2 NA chr2 677186 697371 + 20186 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC092159.2 NA 0.047 80-90% Testis 1.653626014 Breast_cancer,CRC,HCC,Normal NA NA boxplot CTBP1-AS2 CTBP1 antisense RNA 2 (head to head) chr4 1249300 1288291 + 38992 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTBP1-AS2 NA 0.988 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up),CRC(down) NA boxplot PRELID1P1 PRELI domain containing 1 pseudogene 1 chr6 126643488 126644390 + 903 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PRELID1P1 NA 0.824 50-60% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot LINC00861 long intergenic non-protein coding RNA 861 chr8 125922308 125951249 - 28942 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00861 NA 0.976 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down),HCC(down),PAAD(down) NA boxplot AC006509.4 NA chr2 47705468 47705979 + 512 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC006509.4 NA 0.012 90-100% NA NA PAAD NA NA boxplot LINC00470 long intergenic non-protein coding RNA 470 chr18 1254383 1408344 - 153962 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00470 NA 0.082 20-30% Testis 3.179819876 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot KRT8P46 keratin 8 pseudogene 46 chr4 102728746 102730171 - 1426 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KRT8P46 NA 0.965 0-10% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP1-197B17.4 NA chr12 47731908 47732351 + 444 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-197B17.4 NA 0.294 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-598F7.6 NA chr12 166856 182399 - 15544 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-598F7.6 NA 0.482 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-468E2.11 NA chr14 24201612 24202811 - 1200 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-468E2.11 NA 0.553 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot LINC00567 long intergenic non-protein coding RNA 567 chr13 110809676 110813084 - 3409 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00567 NA 0.012 90-100% Testis 4.651481731 Breast_cancer,CRC NA NA boxplot RP3-475N16.1 NA chr6 42940364 42948360 + 7997 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-475N16.1 NA 0.812 10-20% NA NA CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-48C7.8 NA chr9 137605744 137711018 + 105275 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-48C7.8 NA 0.165 70-80% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP1-99E18.2 NA chr6 150934968 150935566 + 599 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-99E18.2 NA 0.541 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot FAM185BP family with sequence similarity 185, member B pseudogene chr7 77083886 77122116 - 38231 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FAM185BP NA 0.824 10-20% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-308D16.2 NA chrX 136909395 137021630 + 112236 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-308D16.2 NA 0.329 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot LINC00271 long intergenic non-protein coding RNA 271 chr6 135497801 135716055 + 218255 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00271 NA 0.071 20-30% NA NA Breast_cancer,CRC,Normal,PAAD NA NA boxplot RP11-338H14.1 NA chr11 95482406 95497553 + 15148 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-338H14.1 NA 0.012 60-70% Testis 4.605276452 HCC,Normal NA NA boxplot AC022182.3 NA chr8 60965802 60967775 - 1974 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC022182.3 NA 0.882 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),PAAD(up) NA boxplot USP3-AS1 USP3 antisense RNA 1 chr15 63544247 63601589 - 57343 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=USP3-AS1 exo_circ_031288 0.635 30-40% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot SSSCA1-AS1 SSSCA1 antisense RNA 1 (head to head) chr11 65568482 65570423 - 1942 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SSSCA1-AS1 NA 0.271 50-60% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot SLC4A1APP1 solute carrier family 4 (anion exchanger), member 1, adaptor protein pseudogene 1 chr9 30558880 30559481 - 602 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SLC4A1APP1 NA 0.694 30-40% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot SETP9 SET pseudogene 9 chr1 160670148 160670979 + 832 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SETP9 NA 0.024 60-70% Testis 3.368641787 CRC,Normal,PAAD NA NA boxplot RP11-404P21.6 NA chr14 96275046 96276723 - 1678 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-404P21.6 NA 0.012 80-90% NA NA NA NA NA boxplot RP11-441F2.4 NA chr16 56306845 56308335 + 1491 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-441F2.4 NA 0.035 60-70% NA NA Breast_cancer,CRC,PAAD NA NA boxplot RP11-387M24.5 NA chr6 43074331 43074739 - 409 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-387M24.5 NA 0.024 90-100% NA NA Breast_cancer,HCC NA NA boxplot CTC-232P5.3 NA chr19 6067953 6077119 + 9167 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-232P5.3 NA 0.035 70-80% Testis 4.496843123 Breast_cancer,CRC,HCC NA NA boxplot RP11-245J9.6 NA chr3 64019508 64019925 + 418 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-245J9.6 NA 0.012 80-90% NA NA CRC NA NA boxplot RP4-591N18.2 NA chr22 40521800 40526707 + 4908 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-591N18.2 NA 0.012 50-60% Testis 1.723475748 Breast_cancer,CRC NA NA boxplot SNX18P10 sorting nexin 18 pseudogene 10 chr21 8801362 8801880 - 519 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SNX18P10 NA 0.012 60-70% NA NA PAAD NA NA boxplot LINC01273 long intergenic non-protein coding RNA 1273 chr20 50172550 50176671 + 4122 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01273 NA 0.082 50-60% NA NA Breast_cancer,CHD,HCC,Normal,PAAD NA NA boxplot RP11-235G24.3 NA chr6 160926369 160927162 + 794 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-235G24.3 NA 0.012 90-100% Testis 3.925104682 Normal NA NA boxplot CTD-2206G10.2 NA chr5 31923367 31923532 + 166 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2206G10.2 NA 0.047 50-60% NA NA HCC,Normal,PAAD NA NA boxplot CTD-2033A16.3 NA chr16 69727013 69742563 + 15551 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2033A16.3 NA 0.282 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP1-111D6.4 NA chr6 149243299 149257551 - 14253 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-111D6.4 NA 0.024 70-80% NA NA Breast_cancer,HCC,Normal NA NA boxplot RP11-789C2.1 NA chr4 132004810 132124031 - 119222 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-789C2.1 NA 0.012 90-100% NA NA Normal NA NA boxplot CTD-2287O16.4 NA chr5 116078110 116078570 - 461 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2287O16.4 NA 0.024 90-100% NA NA PAAD NA NA boxplot PMS2P1 PMS1 homolog 2, mismatch repair system component pseudogene 1 chr7 100320992 100341908 - 20917 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PMS2P1 NA 0.988 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up) NA boxplot RP11-956E11.1 NA chr12 69449470 69460724 + 11255 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-956E11.1 exo_circ_014232 0.271 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-33N14.5 NA chr12 118037869 118038081 + 213 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-33N14.5 NA 0.059 80-90% NA NA CRC,PAAD NA NA boxplot HDAC1P2 histone deacetylase 1 pseudogene 2 chr1 220625740 220628056 + 2317 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HDAC1P2 NA 0.024 0-10% NA NA Breast_cancer,PAAD NA NA boxplot CTA-38K21.2 NA chrX 119693568 119696059 + 2492 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTA-38K21.2 NA 0.024 70-80% NA NA Breast_cancer,CRC,PAAD NA NA boxplot LINC00973 long intergenic non-protein coding RNA 973 chr3 98981058 98983096 + 2039 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00973 NA 0.012 20-30% Testis 4.906892038 NA NA NA boxplot ST13P21 suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein) pseudogene 21 chr1 108502358 108503455 + 1098 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ST13P21 NA 0.012 80-90% NA NA Breast_cancer,HCC NA NA boxplot L34079.3 NA chr19 43553445 43555494 + 2050 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=L34079.3 NA 0.129 60-70% Brain 4.906892038 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-395L14.13 NA chr2 113667478 113668621 - 1144 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-395L14.13 NA 0.141 20-30% Testis 2.091437687 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-396O20.1 NA chr11 15643885 15705368 + 61484 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-396O20.1 NA 0.024 80-90% Kidney 3.113006859 HCC NA NA boxplot RP3-412A9.16 NA chr22 31082156 31083565 - 1410 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-412A9.16 NA 0.118 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-2C24.5 NA chr16 30821068 30822110 - 1043 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-2C24.5 NA 0.024 80-90% Testis 1.100422678 Breast_cancer,Normal NA NA boxplot RP1-85F18.6 NA chr22 41169190 41183144 - 13955 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-85F18.6 NA 0.106 80-90% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CTD-2012J19.3 NA chr5 1594626 1611467 + 16842 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2012J19.3 NA 0.024 40-50% NA NA Breast_cancer,Normal,PAAD NA NA boxplot KCTD10P1 potassium channel tetramerization domain containing 10 pseudogene 1 chr9 28598668 28599292 - 625 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KCTD10P1 NA 0.012 70-80% NA NA Normal NA NA boxplot AP000654.4 NA chr11 86833068 86837615 + 4548 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AP000654.4 NA 0.118 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot bP-2189O9.3 NA chr21 8759077 8761335 + 2259 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=bP-2189O9.3 NA 0.024 40-50% NA NA Breast_cancer,CRC,Normal NA NA boxplot HMGB1P42 high mobility group box 1 pseudogene 42 chr11 120936102 120936654 - 553 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HMGB1P42 NA 0.012 50-60% Testis 4.906892038 Breast_cancer,HCC,Normal NA NA boxplot RP11-83B20.1 NA chr12 124513222 124514813 + 1592 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-83B20.1 NA 0.012 80-90% Testis 1.27690361 Breast_cancer,HCC NA NA boxplot RP11-274B21.10 NA chr7 128667043 128668156 + 1114 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-274B21.10 NA 0.094 40-50% NA NA CRC,Normal,PAAD NA NA boxplot RP5-1024N4.4 NA chr1 48227888 48229561 - 1674 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-1024N4.4 NA 0.082 60-70% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot AF001548.6 NA chr16 15741151 15741791 + 641 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AF001548.6 NA 0.129 70-80% NA NA CRC,HCC,Normal,PAAD NA NA boxplot ZMYND10-AS1 ZMYND10 antisense RNA 1 chr3 50341106 50345697 + 4592 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ZMYND10-AS1 NA 0.047 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC097711.1 NA chr4 80079532 80081122 + 1591 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC097711.1 NA 0.188 50-60% Cervix 4.906892038 CRC,HCC,Normal,PAAD NA NA boxplot AC005387.2 NA chr19 18532908 18536188 + 3281 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC005387.2 NA 0.024 10-20% NA NA Breast_cancer,HCC,Normal NA NA boxplot RP11-875O11.2 NA chr8 23068229 23083619 + 15391 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-875O11.2 NA 0.012 80-90% Testis 1.343528052 CRC NA NA boxplot RP11-680F8.3 NA chr15 29822631 29824081 + 1451 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-680F8.3 NA 0.141 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-490B18.5 NA chr16 75556392 75557059 + 668 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-490B18.5 NA 0.035 50-60% NA NA CRC,HCC,PAAD NA NA boxplot RP11-574E24.3 NA chr9 64637845 64652556 + 14712 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-574E24.3 NA 0.129 80-90% NA NA Breast_cancer,CRC,HCC,PAAD NA NA boxplot RP11-486B10.4 NA chr1 41542069 41544310 + 2242 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-486B10.4 NA 0.035 10-20% Skin 1.659668675 Breast_cancer,Normal NA NA boxplot RP11-252E2.1 NA chr16 75108601 75110712 - 2112 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-252E2.1 NA 0.153 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP5-1116H23.5 NA chr20 5049857 5050321 - 465 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-1116H23.5 NA 0.012 40-50% NA NA NA NA NA boxplot RP11-552D4.1 NA chr1 230002730 230007162 + 4433 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-552D4.1 NA 0.141 70-80% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-465L10.10 NA chr20 46013500 46022073 - 8574 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-465L10.10 NA 0.153 70-80% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot SCOC-AS1 SCOC antisense RNA 1 chr4 140283724 140373381 - 89658 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SCOC-AS1 exo_circ_038665,exo_circ_020165,exo_circ_054472 0.624 20-30% NA NA CHD,CRC,HCC,Normal,PAAD CHD(down),CRC(down) NA boxplot ARAP1-AS2 ARAP1 antisense RNA 2 chr11 72700474 72705607 + 5134 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ARAP1-AS2 NA 0.271 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-360L9.4 NA chr8 41534155 41578368 - 44214 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-360L9.4 exo_circ_044774 0.047 70-80% NA NA CRC,HCC,Normal,PAAD NA NA boxplot MUC19 mucin 19, oligomeric chr12 40393395 40570832 + 177438 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MUC19 NA 0.059 40-50% Salivary Gland 3.799589242 Breast_cancer,HCC,Normal,PAAD NA NA boxplot RP11-285A18.2 NA chr10 123913574 123931597 - 18024 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-285A18.2 NA 0.012 70-80% Testis 4.906892038 Breast_cancer,HCC NA NA boxplot GABPB1-AS1 GABPB1 antisense RNA 1 chr15 50354959 50372202 + 17244 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GABPB1-AS1 NA 0.894 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down),CRC(up),HCC(down),PAAD(up) NA boxplot RP11-452D2.2 NA chr9 63703065 63703755 + 691 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-452D2.2 NA 0.071 70-80% Testis 4.049661278 Breast_cancer,Normal NA NA boxplot CTD-2265O21.3 NA chr19 12825711 12832983 + 7273 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2265O21.3 NA 0.012 90-100% NA NA Breast_cancer NA NA boxplot RPS26P21 ribosomal protein S26 pseudogene 21 chr3 119298665 119299012 + 348 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPS26P21 NA 0.035 50-60% NA NA Breast_cancer,CRC,Normal NA NA boxplot FTH1P10 ferritin, heavy polypeptide 1 pseudogene 10 chr5 17353695 17354624 - 930 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FTH1P10 NA 1 0-10% NA NA CHD,CRC,HCC,Normal,PAAD CRC(up),HCC(up) NA boxplot RP4-651E10.4 NA chr1 86571181 86693203 - 122023 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-651E10.4 NA 0.035 70-80% NA NA HCC,Normal,PAAD NA NA boxplot BPESC1 blepharophimosis, epicanthus inversus and ptosis, candidate 1 (non-protein coding) chr3 139104185 139125171 + 20987 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=BPESC1 NA 0.012 0-10% Testis 3.548378026 Breast_cancer,CRC NA NA boxplot RP11-1277A3.1 NA chr5 177611253 177619754 + 8502 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1277A3.1 NA 0.365 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot OGFR-AS1 OGFR antisense RNA 1 chr20 62800627 62805587 - 4961 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=OGFR-AS1 NA 0.012 50-60% NA NA Breast_cancer,Normal NA NA boxplot EEF1A1P9 eukaryotic translation elongation factor 1 alpha 1 pseudogene 9 chr4 105484698 105486080 + 1383 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=EEF1A1P9 NA 1 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up),CRC(up),HCC(up),PAAD(down) NA boxplot RP11-816J6.3 NA chr3 169769649 169772043 + 2395 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-816J6.3 NA 0.176 20-30% Testis 1.639612651 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot MIR600HG MIR600 host gene chr9 123109494 123115477 - 5984 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MIR600HG NA 0.871 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down),HCC(down),PAAD(down) NA boxplot RP11-422P24.11 NA chr1 153977743 153979160 + 1418 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-422P24.11 NA 0.247 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RPL12P6 ribosomal protein L12 pseudogene 6 chr14 34740336 34740833 - 498 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL12P6 NA 0.988 10-20% NA NA CHD,CRC,HCC,Normal,PAAD CHD(up),CRC(up),HCC(up),PAAD(up) NA boxplot RP11-401L13.4 NA chr7 103141349 103141939 - 591 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-401L13.4 NA 0.141 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC015849.12 NA chr17 35808489 35808897 - 409 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC015849.12 NA 0.024 70-80% Testis 4.906892038 CRC NA NA boxplot CTD-2026K11.3 NA chr15 75624793 75625690 + 898 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2026K11.3 NA 0.082 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot AL121578.2 NA chrX 37906147 37949405 + 43259 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AL121578.2 NA 0.024 60-70% Adrenal Gland 3.547923354 PAAD NA NA boxplot ECEL1P2 endothelin converting enzyme-like 1, pseudogene 2 chr2 232385750 232387457 - 1708 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ECEL1P2 NA 0.024 70-80% Lung 3.136008956 Breast_cancer,HCC NA NA boxplot PGBD4P3 piggyBac transposable element derived 4 pseudogene 3 chr5 148307298 148308258 + 961 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PGBD4P3 NA 0.047 20-30% NA NA Normal,PAAD NA NA boxplot RP4-756H11.3 NA chr7 66654538 66669855 + 15318 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-756H11.3 NA 0.659 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot FAM87B family with sequence similarity 87 member B chr1 817371 819837 + 2467 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FAM87B NA 0.082 80-90% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CTD-3187F8.14 NA chr19 51152923 51181966 - 29044 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-3187F8.14 NA 0.141 10-20% Testis 2.877236998 Breast_cancer,Normal,PAAD NA NA boxplot LINC01550 long intergenic non-protein coding RNA 1550 chr14 97925610 97978124 - 52515 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01550 exo_circ_017047,exo_circ_057084 0.894 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down),HCC(down),PAAD(down) NA boxplot NR2F1-AS1 NR2F1 antisense RNA 1 chr5 93409359 93585648 - 176290 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NR2F1-AS1 NA 0.659 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD HCC(up) NA boxplot AP003068.18 NA chr11 65174117 65176470 - 2354 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AP003068.18 NA 0.835 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-872J21.3 NA chr14 96500810 96502321 - 1512 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-872J21.3 NA 0.188 60-70% Testis 1.081193488 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP4-647C14.3 NA chr14 73272182 73274081 - 1900 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-647C14.3 NA 0.153 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot AGBL5-IT1 AGBL5 intronic transcript 1 chr2 27061038 27061815 + 778 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AGBL5-IT1 NA 0.024 40-50% NA NA Normal NA NA boxplot ZDHHC20P1 zinc finger, DHHC-type containing 20 pseudogene 1 chr6 29708125 29708547 - 423 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ZDHHC20P1 NA 0.141 40-50% NA NA Breast_cancer,CHD,CRC,HCC,Normal NA NA boxplot HSD3BP5 hydroxy-delta-5-steroid dehydrogenase, 3 beta, pseudogene 5 chr1 119601340 119609250 + 7911 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HSD3BP5 NA 0.012 0-10% NA NA Breast_cancer,PAAD NA NA boxplot RP1-179N16.6 NA chr6 36146698 36197205 - 50508 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-179N16.6 NA 0.424 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot MAFIP MAFF interacting protein (pseudogene) chrY 11153858 11159013 - 5156 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MAFIP NA 0.176 70-80% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot KB-1572G7.3 NA chr22 23630618 23638941 - 8324 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KB-1572G7.3 NA 0.106 70-80% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-26J3.3 NA chr8 79956465 79957381 - 917 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-26J3.3 NA 0.612 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP5-1073F15.1 NA chr17 59912197 59912366 + 170 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-1073F15.1 NA 0.035 80-90% Testis 4.258699689 CRC NA NA boxplot RP11-482G13.1 NA chr7 19018 35489 - 16472 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-482G13.1 NA 0.541 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP13-254B10.1 NA chr7 65840212 65840596 + 385 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP13-254B10.1 NA 0.059 80-90% Testis 3.120099849 Breast_cancer,CRC,HCC,PAAD NA NA boxplot AP001172.2 NA chr21 16291791 16308133 - 16343 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AP001172.2 NA 0.012 80-90% NA NA NA NA NA boxplot RPL21P5 ribosomal protein L21 pseudogene 5 chr14 31111569 31112239 - 671 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL21P5 NA 0.094 30-40% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot RP11-282K24.3 NA chr12 19147074 19154659 + 7586 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-282K24.3 exo_circ_050992 0.165 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP5-919F19.5 NA chr6 109487906 109506800 + 18895 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-919F19.5 NA 0.012 50-60% NA NA HCC NA NA boxplot TMPO-AS1 TMPO antisense RNA 1 chr12 98512973 98516422 - 3450 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TMPO-AS1 NA 0.859 0-10% Testis 1.540598481 Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-78A19.3 NA chr18 11851414 11852751 - 1338 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-78A19.3 NA 0.376 10-20% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot MANEA-AS1 MANEA antisense RNA 1 (head to head) chr6 95575183 95577450 - 2268 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MANEA-AS1 NA 0.459 20-30% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-508N22.12 NA chr10 38137337 38144399 + 7063 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-508N22.12 NA 0.106 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CTA-929C8.5 NA chr22 27276240 27286349 + 10110 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTA-929C8.5 NA 0.012 40-50% NA NA Breast_cancer,PAAD NA NA boxplot CTB-35F21.1 NA chr5 139684645 139745010 + 60366 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTB-35F21.1 NA 0.059 10-20% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot RP1-153P14.7 NA chr6 37567716 37571460 + 3745 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-153P14.7 exo_circ_033464,exo_circ_018701 0.141 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot KRT8P33 keratin 8 pseudogene 33 chr5 123400922 123402344 - 1423 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KRT8P33 NA 0.424 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-740N7.3 NA chr7 6900424 6900623 - 200 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-740N7.3 NA 0.024 70-80% Fallopian Tube 4.906892038 CRC,Normal NA NA boxplot RP11-266O8.1 NA chr15 93312557 93569483 + 256927 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-266O8.1 NA 0.012 90-100% Testis 1.37604746 Breast_cancer,Normal NA NA boxplot RP11-863K10.7 NA chr8 37734761 37737426 - 2666 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-863K10.7 NA 0.212 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CARM1P1 coactivator associated arginine methyltransferase 1 pseudogene 1 chr9 2907073 3053408 - 146336 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CARM1P1 NA 0.047 50-60% Testis 3.03586847 Breast_cancer,CRC,HCC,Normal NA NA boxplot RP11-554A11.9 NA chr11 69155910 69159752 + 3843 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-554A11.9 NA 0.012 90-100% Stomach 1.551094878 Breast_cancer,PAAD NA NA boxplot CTA-384D8.35 NA chr22 50542305 50542906 - 602 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTA-384D8.35 NA 0.353 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-177N22.3 NA chr16 47529190 47529916 + 727 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-177N22.3 NA 0.035 50-60% NA NA CRC,Normal NA NA boxplot AC006077.3 NA chr5 134905235 134905691 + 457 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC006077.3 NA 0.129 70-80% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot RP11-215E13.1 NA chr17 34169372 34195937 - 26566 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-215E13.1 NA 0.012 50-60% Testis 4.799570285 NA NA NA boxplot EEF1B2P2 eukaryotic translation elongation factor 1 beta 2 pseudogene 2 chr5 68159218 68159893 - 676 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=EEF1B2P2 NA 0.047 90-100% NA NA CRC,HCC,Normal NA NA boxplot RP11-506K6.4 NA chr6 3311662 3313650 + 1989 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-506K6.4 exo_circ_049819,exo_circ_035566 0.012 90-100% NA NA Normal,PAAD NA NA boxplot KRT8P15 keratin 8 pseudogene 15 chr2 202840331 202841781 - 1451 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KRT8P15 NA 0.035 80-90% NA NA Breast_cancer,CRC,Normal,PAAD NA NA boxplot KANSL1-AS1 KANSL1 antisense RNA 1 chr17 46193576 46196723 + 3148 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KANSL1-AS1 NA 0.835 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-354E11.2 NA chr10 19710328 19728550 - 18223 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-354E11.2 NA 0.882 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down),HCC(down) NA boxplot RP11-143K11.7 NA chr17 73202968 73203431 - 464 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-143K11.7 NA 0.094 10-20% NA NA CRC,HCC,Normal NA NA boxplot RP11-96D1.3 NA chr16 68316801 68319036 + 2236 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-96D1.3 NA 0.024 40-50% NA NA CRC NA NA boxplot RP11-14C10.3 NA chr15 101495052 101495567 - 516 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-14C10.3 NA 0.235 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-996F15.2 NA chr12 29280418 29317848 - 37431 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-996F15.2 NA 0.424 10-20% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-16E23.4 NA chr15 65771176 65772139 - 964 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-16E23.4 NA 0.659 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-45M22.5 NA chr17 17235433 17236118 - 686 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-45M22.5 NA 0.071 70-80% NA NA CRC,HCC,Normal NA NA boxplot RP5-1115A15.1 NA chr1 8424645 8434838 + 10194 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-1115A15.1 NA 0.329 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot TPTE2P6 transmembrane phosphoinositide 3-phosphatase and tensin homolog 2 pseudogene 6 chr13 24408157 24597676 + 189520 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TPTE2P6 NA 0.012 70-80% Testis 2.739257834 Breast_cancer,Normal NA NA boxplot GAPDHP21 glyceraldehyde 3 phosphate dehydrogenase pseudogene 21 chr10 55667341 55668350 - 1010 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GAPDHP21 NA 0.024 70-80% NA NA Breast_cancer,PAAD NA NA boxplot MST1P2 macrophage stimulating 1 (hepatocyte growth factor-like) pseudogene 2 chr1 16645622 16650289 + 4668 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MST1P2 NA 0.141 60-70% Liver 1.913655542 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot HDAC11-AS1 HDAC11 antisense RNA 1 chr3 13476982 13480053 - 3072 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HDAC11-AS1 NA 0.059 70-80% Testis 4.906892038 CRC,PAAD NA NA boxplot CTD-2017D11.2 NA chr19 24078481 24080669 + 2189 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2017D11.2 NA 0.153 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot TFAMP1 transcription factor A, mitochondrial pseudogene 1 chr7 1614590 1615325 + 736 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TFAMP1 NA 0.012 90-100% NA NA NA NA NA boxplot BNIP3P2 BCL2/adenovirus E1B 19kDa interacting protein 3 pseudogene 2 chr22 15349467 15350043 + 577 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=BNIP3P2 NA 0.024 50-60% NA NA PAAD NA NA boxplot VIM-AS1 VIM antisense RNA 1 chr10 17214239 17229985 - 15747 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=VIM-AS1 exo_circ_045087 0.988 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down) NA boxplot RP5-907C10.3 NA chr7 124742312 124745017 - 2706 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-907C10.3 NA 0.024 30-40% NA NA HCC NA NA boxplot AC018865.11 NA chr2 130082092 130082220 - 129 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC018865.11 NA 0.012 80-90% NA NA NA NA NA boxplot LINC01281 long intergenic non-protein coding RNA 1281 chrX 39304956 39327362 - 22407 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01281 NA 0.047 60-70% NA NA Breast_cancer,HCC,Normal NA NA boxplot UNC93B4 unc-93 homolog B4 pseudogene (C. elegans) chr4 4143458 4150421 - 6964 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=UNC93B4 NA 0.012 90-100% Nerve 4.219585673 Breast_cancer,CRC NA NA boxplot RP11-191L17.1 NA chr2 48440043 48440597 - 555 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-191L17.1 NA 0.082 30-40% NA NA CRC,HCC,Normal NA NA boxplot DIAPH3-AS1 DIAPH3 antisense RNA 1 chr13 60012751 60044357 + 31607 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DIAPH3-AS1 NA 0.012 60-70% Testis 4.906892038 PAAD NA NA boxplot AC098820.3 NA chr2 216479030 216498761 - 19732 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC098820.3 NA 0.306 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot PRELID2P1 PRELI domain containing 2 pseudogene 1 chr12 68957377 68957677 - 301 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PRELID2P1 NA 0.047 50-60% NA NA CRC,HCC,Normal NA NA boxplot RP11-541N10.3 NA chr10 103877374 103879761 - 2388 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-541N10.3 NA 0.871 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot CTB-147C22.8 NA chr19 50950185 50963649 + 13465 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTB-147C22.8 NA 0.035 80-90% Testis 4.517403566 Breast_cancer,CRC,HCC NA NA boxplot C2orf27A chromosome 2 open reading frame 27A chr2 131722375 131767404 + 45030 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=C2orf27A NA 0.576 20-30% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD PAAD(up) NA boxplot RPL23AP84 ribosomal protein L23a pseudogene 84 chr4 190195727 190196190 + 464 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL23AP84 NA 0.294 70-80% NA NA CRC,HCC,PAAD NA NA boxplot LINC00665 long intergenic non-protein coding RNA 665 chr19 36313067 36331718 - 18652 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00665 NA 0.929 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down),CRC(down) NA boxplot RP11-236F9.2 NA chr9 63330326 63343660 + 13335 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-236F9.2 NA 0.047 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-70P17.1 NA chr1 25581478 25590356 + 8879 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-70P17.1 NA 0.459 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP1-278E11.3 NA chr6 39958414 39958833 - 420 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-278E11.3 NA 0.259 90-100% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot RP11-449L13.2 NA chr11 16484084 16484671 - 588 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-449L13.2 NA 0.035 80-90% NA NA CRC,HCC NA NA boxplot AC078852.2 NA chr4 1358479 1359461 + 983 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC078852.2 NA 0.012 90-100% Testis 1.479212234 NA NA NA boxplot AC019097.7 NA chr2 99102018 99102752 + 735 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC019097.7 NA 0.671 10-20% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(down),PAAD(down) NA boxplot CTC-537E7.3 NA chr5 68430427 68434481 - 4055 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-537E7.3 NA 0.294 20-30% Liver 2.529793795 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-495P10.7 NA chr1 148290889 148297271 - 6383 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-495P10.7 NA 0.035 60-70% NA NA HCC,Normal,PAAD NA NA boxplot KIRREL-IT1 KIRREL intronic transcript 1 chr1 158025550 158031166 + 5617 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KIRREL-IT1 NA 0.047 30-40% NA NA Breast_cancer,HCC,PAAD NA NA boxplot RP11-582E3.6 NA chr12 27037100 27038960 + 1861 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-582E3.6 NA 0.788 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(up) NA boxplot HERC2P11 hect domain and RLD 2 pseudogene 11 chr15 28575019 28579400 - 4382 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HERC2P11 NA 0.118 60-70% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot RAI1-AS1 RAI1 antisense RNA 1 chr17 17759154 17770821 - 11668 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RAI1-AS1 NA 0.012 60-70% NA NA PAAD NA NA boxplot RP11-609D21.3 NA chr17 6772831 6776116 - 3286 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-609D21.3 NA 0.518 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot OR2L1P olfactory receptor family 2 subfamily L member 1 pseudogene chr1 247990267 247991204 + 938 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=OR2L1P exo_circ_048302 0.341 20-30% Testis 3.193425827 CRC,HCC,Normal,PAAD NA NA boxplot RP11-77P16.3 NA chr3 130055724 130055920 - 197 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-77P16.3 NA 0.012 10-20% NA NA PAAD NA NA boxplot HAND2-AS1 HAND2 antisense RNA 1 (head to head) chr4 173527270 173591324 + 64055 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HAND2-AS1 NA 0.035 10-20% NA NA Breast_cancer,HCC,Normal NA NA boxplot AC005301.9 NA chr22 16601911 16615111 + 13201 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC005301.9 NA 0.929 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot AC073133.1 NA chr7 156437789 156445588 - 7800 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC073133.1 NA 0.082 40-50% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot RP11-624L4.2 NA chr15 39472703 39481206 + 8504 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-624L4.2 NA 0.024 50-60% Testis 4.588815963 Breast_cancer,HCC,Normal NA NA boxplot RP11-66N24.4 NA chr14 23511760 23560778 + 49019 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-66N24.4 NA 0.835 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CTC-525D6.3 NA chr19 29506966 29509041 - 2076 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-525D6.3 NA 0.012 70-80% NA NA Breast_cancer,CRC NA NA boxplot RP11-1148L6.9 NA chrX 48568014 48574860 - 6847 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1148L6.9 NA 0.706 10-20% NA NA CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-255H23.2 NA chr19 23762944 23833314 + 70371 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-255H23.2 exo_circ_011436,exo_circ_007219,exo_circ_020517 0.929 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down) NA boxplot NCF1B neutrophil cytosolic factor 1B pseudogene chr7 73220624 73235945 + 15322 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NCF1B NA 1 0-10% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-961A15.1 NA chr17 1725748 1738585 - 12838 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-961A15.1 NA 0.376 20-30% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot RP1-39G22.7 NA chr1 40256427 40257967 - 1541 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-39G22.7 NA 0.765 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot CLK2P1 CDC like kinase 2, pseudogene 1 chr7 23585062 23586355 - 1294 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CLK2P1 NA 0.694 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),PAAD(down) NA boxplot RP11-98J23.2 NA chr5 69875271 69920867 + 45597 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-98J23.2 NA 0.918 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(up),HCC(up),PAAD(up) NA boxplot CTD-2540B15.7 NA chr19 33301279 33301940 + 662 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2540B15.7 NA 0.224 50-60% NA NA Breast_cancer,HCC,Normal NA NA boxplot CITF22-62D4.1 NA chr22 35626988 35635134 - 8147 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CITF22-62D4.1 NA 0.024 50-60% NA NA Breast_cancer,Normal,PAAD NA NA boxplot RP11-369K16.1 NA chr8 12958387 12962200 + 3814 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-369K16.1 NA 0.047 40-50% NA NA HCC,PAAD NA NA boxplot RP11-108L7.4 NA chr10 100980507 100985614 - 5108 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-108L7.4 NA 0.059 80-90% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot CTB-129P6.11 NA chr19 44950044 44954007 - 3964 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTB-129P6.11 NA 0.012 90-100% NA NA Normal NA NA boxplot CTD-2193P3.1 NA chr5 80997183 80998047 - 865 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2193P3.1 NA 0.035 10-20% NA NA Normal,PAAD NA NA boxplot RP11-459O1.2 NA chr6 88298950 88421033 - 122084 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-459O1.2 NA 0.035 30-40% Whole Blood 4.906892038 CRC,HCC NA NA boxplot RP11-181C3.1 NA chr12 98485544 98503855 - 18312 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-181C3.1 NA 0.576 20-30% Testis 1.252138324 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RPS15AP6 ribosomal protein S15a pseudogene 6 chr1 21003550 21003934 - 385 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPS15AP6 exo_circ_037989 0.071 40-50% NA NA CRC,Normal,PAAD NA NA boxplot CH507-513H4.3 NA chr21 8437629 8438551 - 923 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CH507-513H4.3 NA 0.929 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(up) NA boxplot RPSAP29 ribosomal protein SA pseudogene 29 chr3 110682286 110683154 - 869 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPSAP29 NA 0.012 90-100% NA NA Breast_cancer,HCC NA NA boxplot RP11-332J15.1 NA chr5 6795880 6826728 + 30849 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-332J15.1 NA 0.024 40-50% NA NA PAAD NA NA boxplot RP11-373N22.3 NA chr5 148268307 148383783 - 115477 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-373N22.3 NA 0.129 50-60% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot AC073150.6 NA chr7 27491682 27492765 - 1084 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC073150.6 exo_circ_050027 0.012 80-90% Testis 1.380982908 Breast_cancer NA NA boxplot RP1-16A9.1 NA chr8 74199396 74208441 + 9046 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-16A9.1 NA 0.059 40-50% NA NA CRC,HCC NA NA boxplot CYP51A1P3 cytochrome P450 family 51 subfamily A member 1 pseudogene 3 chr6 148478693 148480763 + 2071 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CYP51A1P3 NA 0.035 80-90% NA NA Breast_cancer,CRC,Normal NA NA boxplot RP11-107E21.1 NA chr4 123861860 123862015 - 156 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-107E21.1 NA 0.012 60-70% NA NA HCC NA NA boxplot RP11-478C6.6 NA chr4 268982 269531 - 550 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-478C6.6 NA 0.012 50-60% NA NA CRC NA NA boxplot RP13-157F18.2 NA chr7 65617077 65619214 + 2138 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP13-157F18.2 NA 0.035 90-100% NA NA Normal NA NA boxplot RP11-253M7.1 NA chr15 69396904 69415029 - 18126 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-253M7.1 NA 0.071 60-70% Testis 1.019639214 CRC,HCC,Normal NA NA boxplot RP11-218F4.1 NA chr17 27929548 27974223 - 44676 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-218F4.1 exo_circ_034553 0.388 20-30% Testis 3.667086812 CRC,HCC,Normal,PAAD NA NA boxplot RP11-190J1.3 NA chr10 101704652 101708401 - 3750 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-190J1.3 NA 0.012 10-20% Testis 4.195895272 NA NA NA boxplot KB-67B5.12 NA chr22 16572027 16574637 + 2611 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KB-67B5.12 NA 0.024 70-80% NA NA Normal NA NA boxplot RP11-393I2.2 NA chr6 87173368 87174303 - 936 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-393I2.2 NA 0.035 50-60% NA NA Breast_cancer,HCC,Normal NA NA boxplot RP11-638I2.2 NA chr14 100263781 100265405 + 1625 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-638I2.2 NA 0.035 30-40% NA NA Breast_cancer,HCC,PAAD NA NA boxplot HSD17B1P1 hydroxysteroid (17-beta) dehydrogenase 1 pseudogene 1 chr17 42546764 42548706 + 1943 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HSD17B1P1 NA 0.153 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-225B17.2 NA chr7 32758882 32759353 + 472 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-225B17.2 NA 0.376 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-799D4.4 NA chr17 35231450 35242963 - 11514 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-799D4.4 NA 0.671 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot VWFP1 von Willebrand factor pseudogene 1 chr22 16690103 16704477 - 14375 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=VWFP1 NA 0.424 50-60% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot LINC00508 long intergenic non-protein coding RNA 508 chr12 127940595 127950160 - 9566 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00508 NA 0.224 30-40% Testis 4.906892038 CRC,HCC,Normal,PAAD NA NA boxplot RP11-223A3.1 NA chr1 42335386 42338376 - 2991 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-223A3.1 NA 0.024 30-40% NA NA Normal NA NA boxplot RP11-160H22.5 NA chr1 174115300 174160004 - 44705 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-160H22.5 NA 0.4 20-30% Testis 2.376179942 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-119F7.3 NA chr10 68674356 68675100 + 745 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-119F7.3 NA 0.047 40-50% NA NA Normal,PAAD NA NA boxplot RP11-217F16.1 NA chr9 72445754 72445969 - 216 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-217F16.1 NA 0.024 10-20% NA NA Normal NA NA boxplot RP11-120K19.3 NA chr18 62551203 62552505 + 1303 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-120K19.3 NA 0.141 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-565F19.2 NA chr17 9553323 9555696 - 2374 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-565F19.2 NA 0.518 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-756G20.1 NA chr12 92247756 92363832 - 116077 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-756G20.1 NA 0.341 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot LINC00479 long intergenic non-protein coding RNA 479 chr21 41711520 41715775 - 4256 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00479 NA 0.012 80-90% NA NA Breast_cancer NA NA boxplot RP11-529K1.4 NA chr16 70379457 70399502 + 20046 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-529K1.4 NA 0.306 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-348M3.2 NA chr12 56380361 56382711 - 2351 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-348M3.2 NA 0.012 70-80% NA NA HCC NA NA boxplot RP11-561N12.1 NA chr7 64582733 64583207 + 475 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-561N12.1 NA 0.024 90-100% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot RP11-407A16.3 NA chr12 126610034 126690318 - 80285 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-407A16.3 NA 0.024 20-30% Testis 4.88650162 Breast_cancer,CRC,HCC NA NA boxplot RP11-302L19.3 NA chr6 170178681 170179660 + 980 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-302L19.3 NA 0.047 40-50% NA NA Breast_cancer,HCC,Normal NA NA boxplot RP5-891H21.5 NA chr1 44187943 44189049 - 1107 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-891H21.5 NA 0.094 60-70% Testis 1.434766486 CRC,Normal,PAAD NA NA boxplot RP5-956O18.3 NA chr1 230280312 230281893 - 1582 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-956O18.3 NA 0.188 60-70% NA NA HCC,Normal,PAAD NA NA boxplot CTC-523E23.5 NA chr19 34837889 34855304 + 17416 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-523E23.5 NA 0.212 50-60% Testis 2.044897075 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-121A14.2 NA chr9 124259250 124261156 - 1907 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-121A14.2 NA 0.012 90-100% NA NA HCC NA NA boxplot RP11-552C15.1 NA chr16 12545482 12546684 + 1203 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-552C15.1 NA 0.071 60-70% Testis 3.418677281 CRC,Normal NA NA boxplot RP13-455A7.1 NA chr22 47860671 47862062 + 1392 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP13-455A7.1 NA 0.024 50-60% Skin 4.906892038 PAAD NA NA boxplot SNX29P1 sorting nexin 29 pseudogene 1 chr16 21376648 21386064 + 9417 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SNX29P1 NA 1 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up),PAAD(up) NA boxplot RP4-568C11.4 NA chr20 24931840 24932983 + 1144 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-568C11.4 NA 0.376 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot LINC01471 long intergenic non-protein coding RNA 1471 chr3 127480690 127537780 - 57091 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01471 NA 0.024 50-60% NA NA Breast_cancer,CRC,PAAD NA NA boxplot RP11-66B24.8 NA chr15 100861924 100885329 + 23406 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-66B24.8 NA 0.024 10-20% NA NA Breast_cancer,PAAD NA NA boxplot RP11-536G4.1 NA chr12 95803097 95823307 + 20211 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-536G4.1 NA 0.012 60-70% NA NA NA NA NA boxplot RP11-227D13.2 NA chr15 48725338 48725827 + 490 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-227D13.2 NA 0.224 50-60% Testis 3.566141742 HCC,Normal,PAAD NA NA boxplot AC007796.1 NA chr19 31348881 31417794 + 68914 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC007796.1 NA 0.012 90-100% Ovary 1.401195609 Breast_cancer,HCC NA NA boxplot RAB43P1 RAB43 pseudogene 1 chr16 46626404 46626992 - 589 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RAB43P1 NA 0.976 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up),CRC(down),PAAD(down) NA boxplot RP11-493E12.2 NA chr2 61199979 61200769 + 791 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-493E12.2 NA 0.047 40-50% NA NA CRC,Normal NA NA boxplot KLF3P1 Kruppel-like factor 3 (basic) pseudogene 1 chr5 172254418 172255439 - 1022 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KLF3P1 NA 0.035 40-50% Testis 4.517205105 Breast_cancer,CRC,HCC,PAAD NA NA boxplot RP11-660M5.1 NA chr4 25220403 25220913 + 511 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-660M5.1 NA 0.024 80-90% Testis 1.134105068 CRC,Normal NA NA boxplot RP11-834C11.5 NA chr12 54085132 54125992 - 40861 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-834C11.5 NA 0.047 80-90% Testis 3.269242136 Breast_cancer,CRC,Normal,PAAD NA NA boxplot RP11-231P20.2 NA chr1 26209741 26229840 + 20100 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-231P20.2 NA 0.047 70-80% Thyroid 1.457171452 Breast_cancer,CRC,HCC,Normal NA NA boxplot RP11-127I20.8 NA chr16 4839244 4840334 - 1091 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-127I20.8 NA 0.153 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP1-59D14.1 NA chr17 2384847 2386664 + 1818 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-59D14.1 exo_circ_040353 0.294 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CTD-2169H9.1 NA chr5 123508736 123509187 - 452 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2169H9.1 exo_circ_049435 0.012 80-90% NA NA Normal NA NA boxplot RP11-472K17.3 NA chr13 110123208 110125234 + 2027 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-472K17.3 NA 0.082 70-80% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-475I24.1 NA chr9 42625436 42626813 + 1378 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-475I24.1 NA 0.082 80-90% NA NA CRC,HCC,PAAD NA NA boxplot RP11-142G1.3 NA chr16 52198012 52227956 - 29945 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-142G1.3 NA 0.012 60-70% NA NA Breast_cancer,HCC NA NA boxplot OR10V2P olfactory receptor family 10 subfamily V member 2 pseudogene chr11 59748811 59749574 + 764 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=OR10V2P NA 0.012 70-80% NA NA Breast_cancer NA NA boxplot CTB-133G6.2 NA chr19 7390522 7395039 - 4518 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTB-133G6.2 NA 0.035 60-70% NA NA CRC,HCC,Normal NA NA boxplot MRPS31P5 mitochondrial ribosomal protein S31 pseudogene 5 chr13 52167709 52194465 - 26757 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MRPS31P5 NA 0.965 0-10% NA NA CHD,CRC,HCC,Normal,PAAD CHD(up),PAAD(up) NA boxplot FOXD1-AS1 FOXD1 antisense RNA 1 chr5 73446357 73446984 + 628 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FOXD1-AS1 NA 0.035 60-70% NA NA HCC,PAAD NA NA boxplot ST7-AS2 ST7 antisense RNA 2 chr7 117072072 117146480 - 74409 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ST7-AS2 NA 0.176 60-70% Testis 3.957266088 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-114H24.2 NA chr15 77914217 77926846 - 12630 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-114H24.2 NA 0.012 50-60% Testis 2.997185954 Breast_cancer,Normal NA NA boxplot MTHFD2P1 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase pseudogene 1 chr3 95654423 95683193 - 28771 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MTHFD2P1 NA 0.035 40-50% Spleen 2.021528123 Breast_cancer,HCC NA NA boxplot KB-1507C5.4 NA chr8 102978785 103000184 + 21400 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KB-1507C5.4 NA 0.235 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot MED14OS MED14 opposite strand chrX 40735400 40738701 + 3302 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MED14OS NA 0.294 20-30% NA NA CHD,CRC,HCC,Normal,PAAD CHD(up) NA boxplot RP5-1017F8.2 NA chr20 60083360 60083872 - 513 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-1017F8.2 NA 0.024 30-40% NA NA HCC,Normal NA NA boxplot GOLGA5P1 golgin A5 pseudogene 1 chr5 39169210 39170335 - 1126 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GOLGA5P1 exo_circ_031760,exo_circ_054896 0.2 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot AC002128.5 NA chr19 35251440 35253639 - 2200 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC002128.5 NA 0.024 60-70% NA NA HCC NA NA boxplot HSPA8P15 heat shock protein family A (Hsp70) member 8 pseudogene 15 chr6 151411259 151413945 - 2687 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HSPA8P15 NA 0.059 60-70% NA NA CRC,Normal,PAAD NA NA boxplot LINC01085 long intergenic non-protein coding RNA 1085 chr4 14111968 14140052 + 28085 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01085 exo_circ_043989 0.106 60-70% Testis 1.367706315 CRC,Normal,PAAD NA NA boxplot RP11-195F19.30 NA chr9 34661903 34666029 - 4127 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-195F19.30 NA 0.176 80-90% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-737F9.1 NA chr8 130935409 130949665 + 14257 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-737F9.1 NA 0.012 90-100% Brain 4.906892038 HCC NA NA boxplot RP11-111G20.3 NA chr7 45303620 45304362 + 743 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-111G20.3 NA 0.012 90-100% NA NA PAAD NA NA boxplot RP11-1228E12.1 NA chr17 64099 76866 - 12768 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1228E12.1 NA 0.635 20-30% NA NA CRC,HCC,Normal,PAAD CRC(up) NA boxplot RP11-649E7.8 NA chr14 49601011 49601124 - 114 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-649E7.8 NA 0.024 30-40% NA NA Normal NA NA boxplot RP11-431K24.1 NA chr1 8026738 8122702 + 95965 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-431K24.1 NA 0.012 80-90% NA NA Breast_cancer NA NA boxplot RP11-227H15.4 NA chr10 69215333 69232490 - 17158 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-227H15.4 NA 0.071 50-60% Testis 2.552651621 Breast_cancer,CRC,Normal,PAAD NA NA boxplot RP11-174O3.6 NA chr3 120365993 120368326 - 2334 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-174O3.6 NA 0.012 90-100% NA NA NA NA NA boxplot RP11-446E9.1 NA chr8 56050038 56051207 - 1170 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-446E9.1 NA 0.929 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-299H21.1 NA chr2 101151660 101155412 + 3753 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-299H21.1 NA 0.341 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-283G6.6 NA chr12 26273329 26273900 - 572 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-283G6.6 NA 0.012 90-100% NA NA NA NA NA boxplot RP11-214K3.21 NA chr12 123966077 123966629 - 553 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-214K3.21 NA 0.059 70-80% NA NA CRC,HCC,Normal NA NA boxplot USF1P1 upstream transcription factor 1 pseudogene 1 chr21 33334571 33335096 + 526 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=USF1P1 NA 0.012 90-100% Testis 3.486624797 CRC,Normal NA NA boxplot FYTTD1P1 forty-two-three domain containing 1 pseudogene 1 chr9 101375344 101376603 - 1260 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FYTTD1P1 NA 0.012 40-50% Liver 4.722977242 Breast_cancer NA NA boxplot ANKRD30BP1 ankyrin repeat domain 30B pseudogene 1 chr21 13384249 13427773 - 43525 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ANKRD30BP1 NA 0.024 70-80% Testis 4.173341742 CRC,HCC,PAAD NA NA boxplot RP11-767N6.2 NA chr1 45651039 45651826 - 788 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-767N6.2 NA 0.435 20-30% NA NA CRC,HCC,Normal,PAAD PAAD(up) NA boxplot LARP4P La ribonucleoprotein domain family member 4 pseudogene chr15 36617089 36619265 + 2177 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LARP4P exo_circ_051461,exo_circ_034362 0.047 10-20% NA NA CRC,Normal,PAAD NA NA boxplot AC091878.1 NA chr5 17130028 17217047 - 87020 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC091878.1 NA 0.141 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-764K9.1 NA chr9 63802144 63814159 - 12016 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-764K9.1 NA 0.071 60-70% Spleen 1.129109559 Breast_cancer,CRC,Normal,PAAD NA NA boxplot RP11-397P13.7 NA chr1 203835585 203835912 - 328 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-397P13.7 NA 0.012 30-40% NA NA HCC,PAAD NA NA boxplot AC005037.3 NA chr2 200963263 201009102 + 45840 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC005037.3 NA 0.659 20-30% NA NA CRC,HCC,Normal,PAAD PAAD(up) NA boxplot RP11-334C17.3 NA chr17 80147250 80148596 + 1347 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-334C17.3 NA 0.082 60-70% NA NA Breast_cancer,HCC,Normal NA NA boxplot CTD-2134A5.3 NA chr14 103875055 103877478 + 2424 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2134A5.3 NA 0.012 90-100% NA NA HCC,Normal NA NA boxplot CTD-2081C10.7 NA chr5 53880293 53881051 - 759 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2081C10.7 exo_circ_003997,exo_circ_044274,exo_circ_049552,exo_circ_016238,exo_circ_008921 0.176 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot FCF1P1 FCF1 pseudogene 1 chr7 23619333 23622826 + 3494 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FCF1P1 NA 0.035 70-80% NA NA Breast_cancer,Normal NA NA boxplot VN2R10P vomeronasal 2 receptor 10 pseudogene chr16 77220406 77221258 + 853 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=VN2R10P NA 0.012 90-100% Testis 2.237465341 NA NA NA boxplot TMED11P transmembrane p24 trafficking protein 11, pseudogene chr4 1115197 1153726 - 38530 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TMED11P NA 0.012 40-50% Pancreas 4.688637531 Normal NA NA boxplot AC002044.3 NA chr16 73005601 73006141 - 541 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC002044.3 NA 0.012 30-40% NA NA NA NA NA boxplot RP11-284N8.3 NA chr1 110653560 110657040 - 3481 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-284N8.3 NA 0.929 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-205K6.1 NA chr9 126516417 126518808 + 2392 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-205K6.1 NA 0.024 40-50% Testis 2.88629297 Breast_cancer,Normal,PAAD NA NA boxplot BCRP1 breakpoint cluster region pseudogene 1 chr22 24259929 24263764 - 3836 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=BCRP1 NA 0.024 50-60% Testis 2.470597007 Breast_cancer,CHD NA NA boxplot SDAD1P2 SDA1 domain containing 1 pseudogene 2 chr20 10385779 10387806 + 2028 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SDAD1P2 NA 0.047 80-90% NA NA Breast_cancer,HCC,Normal NA NA boxplot DKFZP434K028 uncharacterized LOC26070 chr11 61746493 61757655 - 11163 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DKFZP434K028 NA 0.047 20-30% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot RP11-385D13.3 NA chr17 15530773 15531089 - 317 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-385D13.3 NA 0.118 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CTD-3193O13.1 NA chr19 7918652 7919157 - 506 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-3193O13.1 NA 0.024 50-60% NA NA Breast_cancer,HCC,PAAD NA NA boxplot TRHDE-AS1 TRHDE antisense RNA 1 chr12 72253508 72274907 - 21400 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TRHDE-AS1 NA 0.671 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up),CRC(up),PAAD(up) NA boxplot RP11-644K8.1 NA chr2 20052134 20054496 + 2363 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-644K8.1 NA 0.012 60-70% Testis 4.441305643 NA NA NA boxplot UBE2Q2P1 ubiquitin conjugating enzyme E2Q family member 2 pseudogene 1 chr15 84526781 84571216 - 44436 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=UBE2Q2P1 exo_circ_025079,exo_circ_011208 0.988 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP3-453C12.15 NA chr20 45435272 45448325 - 13054 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-453C12.15 NA 0.024 60-70% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot RP11-80H18.4 NA chr3 58329965 58330118 + 154 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-80H18.4 NA 0.024 70-80% NA NA CRC NA NA boxplot AC112497.1 NA chrX 15702602 15703243 - 642 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC112497.1 NA 0.141 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot GS1-358P8.4 NA chrX 24545516 24550466 + 4951 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GS1-358P8.4 NA 0.929 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot PDCD6IPP2 PDCD6IP pseudogene 2 chr15 28789664 28859007 + 69344 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PDCD6IPP2 NA 0.929 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-557J10.3 NA chr4 145624159 145626035 - 1877 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-557J10.3 NA 0.094 90-100% Testis 2.144706563 CRC,HCC,Normal,PAAD NA NA boxplot AP000648.5 NA chr11 90193614 90198120 + 4507 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AP000648.5 NA 0.235 0-10% NA NA Breast_cancer,CRC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot AP000343.2 NA chr22 23326616 23328493 + 1878 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AP000343.2 NA 0.012 20-30% Testis 1.854060962 Normal NA NA boxplot DDX11L2 DEAD/H-box helicase 11 like 2 chr2 113599036 113601261 - 2226 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DDX11L2 NA 0.882 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CRC(up),PAAD(up) NA boxplot RP11-1348G14.4 NA chr16 28802743 28817828 + 15086 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1348G14.4 NA 0.059 50-60% NA NA CRC,HCC,Normal NA NA boxplot MTCO2P11 MT-CO2 pseudogene 11 chr9 5098341 5099325 + 985 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MTCO2P11 NA 0.2 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot BMS1P3 BMS1, ribosome biogenesis factor pseudogene 3 chr10 86992253 87000435 + 8183 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=BMS1P3 NA 0.082 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot NSUN5P1 NOP2/Sun RNA methyltransferase family member 5 pseudogene 1 chr7 75410322 75416787 + 6466 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NSUN5P1 NA 0.835 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CRC(up),PAAD(up) NA boxplot GOLGA8DP golgin A8 family member D, pseudogene chr15 22427039 22437902 - 10864 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GOLGA8DP NA 0.082 60-70% Testis 4.797752045 Breast_cancer,HCC,PAAD NA NA boxplot RP1-150O5.3 NA chr1 23549139 23550915 - 1777 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-150O5.3 NA 0.024 80-90% NA NA CRC NA NA boxplot RP11-544I20.2 NA chr14 64329431 64338599 - 9169 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-544I20.2 NA 0.106 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-589P10.5 NA chr17 6994642 6995189 - 548 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-589P10.5 NA 0.435 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CTB-113D17.1 NA chr7 28979967 29013367 + 33401 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTB-113D17.1 NA 0.035 20-30% NA NA Breast_cancer,Normal NA NA boxplot CTC-471J1.2 NA chr19 52058490 52063703 - 5214 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-471J1.2 NA 0.282 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot HIST1H4PS1 histone cluster 1, H4, pseudogene 1 chr6 27807075 27807339 + 265 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HIST1H4PS1 NA 0.024 50-60% Testis 3.077164836 Normal NA NA boxplot RP11-101O21.1 NA chr17 74043452 74154212 - 110761 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-101O21.1 NA 0.012 10-20% Testis 4.84079878 Breast_cancer,Normal NA NA boxplot HMGN1P13 high mobility group nucleosome binding domain 1 pseudogene 13 chr5 111572102 111572239 - 138 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HMGN1P13 NA 0.012 10-20% NA NA Normal NA NA boxplot RP11-138B4.1 NA chr4 187304083 187309682 - 5600 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-138B4.1 exo_circ_002587 0.165 20-30% Testis 1.647671419 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot IFNA20P interferon, alpha 20, pseudogene chr9 21321300 21321827 + 528 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=IFNA20P NA 0.035 20-30% NA NA Normal,PAAD NA NA boxplot RPS2P52 ribosomal protein S2 pseudogene 52 chr19 690353 691172 + 820 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPS2P52 NA 0.012 80-90% Fallopian Tube 4.906892038 Breast_cancer NA NA boxplot AC005532.5 NA chr7 7255154 7277779 + 22626 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC005532.5 NA 0.224 50-60% Esophagus 2.292007316 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-138M12.1 NA chr6 125425627 125445183 - 19557 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-138M12.1 NA 0.012 80-90% Artery 3.433493949 Breast_cancer,PAAD NA NA boxplot RP11-732A19.5 NA chr11 6621451 6622322 + 872 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-732A19.5 NA 0.035 80-90% NA NA HCC,Normal NA NA boxplot RP11-96D1.5 NA chr16 68212401 68221671 - 9271 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-96D1.5 NA 0.012 70-80% NA NA Normal NA NA boxplot GTF2IRD1P1 GTF2I repeat domain containing 1 pseudogene 1 chr7 66809993 66844826 - 34834 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GTF2IRD1P1 NA 0.282 0-10% Testis 3.683215342 Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot RPS26P31 ribosomal protein S26 pseudogene 31 chr7 122681315 122681662 + 348 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPS26P31 NA 0.553 80-90% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP5-827C21.1 NA chr1 234356704 234357141 - 438 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-827C21.1 NA 0.341 90-100% NA NA CRC,HCC,Normal,PAAD NA NA boxplot AC114730.3 NA chr2 241808312 241812016 - 3705 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC114730.3 NA 0.024 90-100% NA NA Breast_cancer,HCC,Normal NA NA boxplot RP11-147G7.3 NA chr3 112525548 112528142 - 2595 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-147G7.3 NA 0.035 80-90% NA NA CRC NA NA boxplot RP11-61L19.1 NA chr18 9506242 9509726 + 3485 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-61L19.1 NA 0.035 80-90% NA NA CRC,HCC NA NA boxplot CTD-2089N3.2 NA chr5 50969217 50970167 - 951 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2089N3.2 NA 0.012 10-20% NA NA Breast_cancer,HCC NA NA boxplot MIR99AHG mir-99a-let-7c cluster host gene chr21 15928296 16627397 + 699102 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MIR99AHG NA 0.541 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD PAAD(up) NA boxplot RP6-24A23.7 NA chrX 108719949 108724944 - 4996 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP6-24A23.7 NA 0.035 0-10% Pituitary 3.221760606 Normal,PAAD PAAD(up) NA boxplot COL4A2-AS2 COL4A2 antisense RNA 2 chr13 110456396 110463287 - 6892 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=COL4A2-AS2 NA 0.012 90-100% NA NA Breast_cancer,PAAD NA NA boxplot CTC-523E23.3 NA chr19 34949038 34951205 - 2168 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-523E23.3 NA 0.612 10-20% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-381E24.4 NA chr3 108574683 108575064 + 382 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-381E24.4 NA 0.012 90-100% NA NA Breast_cancer,HCC NA NA boxplot JMJD1C-AS1 JMJD1C antisense RNA 1 chr10 63465229 63466563 + 1335 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=JMJD1C-AS1 NA 0.282 60-70% Testis 1.119353571 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot PMS2P11 NA chr7 77011551 77015853 + 4303 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PMS2P11 NA 0.506 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-241I20.4 NA chr10 32109861 32111666 + 1806 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-241I20.4 NA 0.012 80-90% Testis 4.906892038 Breast_cancer NA NA boxplot CTD-2118P12.1 NA chr5 29143503 29217115 + 73613 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2118P12.1 exo_circ_027731 0.012 90-100% Testis 4.906892038 HCC NA NA boxplot AC108025.2 NA chr2 5618327 5691118 - 72792 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC108025.2 NA 0.024 80-90% Testis 4.268812057 HCC,PAAD NA NA boxplot HOXD-AS2 HOXD cluster antisense RNA 2 chr2 176121611 176137098 - 15488 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HOXD-AS2 NA 0.365 20-30% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-555K12.2 NA chr4 152613875 152614333 - 459 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-555K12.2 NA 0.024 80-90% Whole Blood 4.090016907 Breast_cancer,CRC,HCC,Normal NA NA boxplot ABC7-42391500H16.4 NA chr4 190195738 190195978 - 241 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ABC7-42391500H16.4 NA 0.012 80-90% NA NA PAAD NA NA boxplot RP11-973N13.3 NA chr14 64552694 64596536 - 43843 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-973N13.3 NA 0.012 20-30% Testis 4.906892038 Normal NA NA boxplot CTD-2014D20.1 NA chr8 140820599 140822414 - 1816 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2014D20.1 NA 0.035 10-20% NA NA Breast_cancer,HCC,PAAD NA NA boxplot RP11-374M1.4 NA chr9 61868727 61887084 + 18358 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-374M1.4 NA 0.024 80-90% NA NA CRC NA NA boxplot SGMS1-AS1 SGMS1 antisense RNA 1 chr10 50624951 50641451 + 16501 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SGMS1-AS1 NA 0.953 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-504P24.3 NA chr1 223992743 224010612 + 17870 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-504P24.3 NA 0.553 10-20% Testis 4.043794107 CRC,HCC,Normal,PAAD PAAD(up) NA boxplot RP11-674I16.2 NA chr2 28015777 28016482 - 706 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-674I16.2 NA 0.012 30-40% NA NA Normal NA NA boxplot CTC-347C20.1 NA chr5 72687112 72762727 - 75616 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-347C20.1 NA 0.012 80-90% Testis 4.432467834 HCC NA NA boxplot RP11-540O11.4 NA chr15 41016807 41027893 + 11087 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-540O11.4 NA 0.094 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-329J18.3 NA chr16 47196311 47202429 + 6119 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-329J18.3 NA 0.012 90-100% Testis 2.851146817 CRC,Normal NA NA boxplot RP11-346D19.1 NA chr6 113531118 113543793 + 12676 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-346D19.1 NA 0.012 10-20% NA NA PAAD NA NA boxplot REXO1L3P REX1, RNA exonuclease 1 homolog-like 3, pseudogene chr8 85654684 85658514 - 3831 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=REXO1L3P NA 0.012 90-100% NA NA CHD NA NA boxplot LINC01535 long intergenic non-protein coding RNA 1535 chr19 37251912 37265535 + 13624 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01535 NA 0.188 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-561I11.3 NA chr1 242203555 242210827 + 7273 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-561I11.3 NA 0.176 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot KCTD9P1 potassium channel tetramerization domain containing 9 pseudogene 1 chr17 20111824 20112990 + 1167 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KCTD9P1 NA 0.259 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-443B7.1 NA chr1 234957342 234970062 - 12721 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-443B7.1 NA 0.494 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-504P24.5 NA chr1 224030704 224035056 - 4353 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-504P24.5 NA 0.741 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down),HCC(down) NA boxplot RP11-415K20.2 NA chr1 22364630 22366482 - 1853 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-415K20.2 NA 0.012 50-60% NA NA Breast_cancer,PAAD NA NA boxplot RP11-157L3.3 NA chr9 41573156 41573453 - 298 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-157L3.3 NA 0.012 90-100% NA NA PAAD NA NA boxplot RP11-391L3.3 NA chr16 81517824 81520617 + 2794 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-391L3.3 NA 0.224 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CNTNAP3P5 contactin associated protein-like 3 pseudogene 5 chr9 62559839 62569907 + 10069 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CNTNAP3P5 NA 0.035 60-70% NA NA CRC,PAAD NA NA boxplot HOTAIR HOX transcript antisense RNA chr12 53962308 53974956 - 12649 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HOTAIR NA 0.047 10-20% NA NA Breast_cancer,HCC,Normal,PAAD NA Yes boxplot RP11-15A1.9 NA chr19 43978376 43978663 + 288 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-15A1.9 NA 0.035 10-20% NA NA CRC,Normal NA NA boxplot RP11-206P5.2 NA chr4 25504997 25506675 + 1679 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-206P5.2 NA 0.012 20-30% Testis 3.235477201 Breast_cancer,Normal NA NA boxplot RPL21P13 ribosomal protein L21 pseudogene 13 chr14 103241492 103241972 + 481 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL21P13 NA 0.012 40-50% NA NA Breast_cancer NA NA boxplot RP11-38M8.1 NA chr7 134416290 134432453 - 16164 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-38M8.1 NA 0.141 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot SPATA20P1 spermatogenesis associated 20 pseudogene 1 chr21 38238227 38238664 - 438 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SPATA20P1 NA 0.035 70-80% Whole Blood 2.14005049 CRC,HCC NA NA boxplot RP11-22H5.1 NA chr16 82727474 82727694 + 221 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-22H5.1 NA 0.024 30-40% NA NA PAAD NA NA boxplot RP11-322D14.2 NA chr16 57052505 57058497 - 5993 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-322D14.2 NA 0.012 20-30% NA NA Breast_cancer,Normal NA NA boxplot RP11-566K11.5 NA chr16 89969791 89972544 + 2754 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-566K11.5 NA 0.271 10-20% NA NA HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot LINC00456 long intergenic non-protein coding RNA 456 chr13 97172469 97179622 - 7154 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00456 NA 0.035 80-90% NA NA Breast_cancer,CRC,Normal NA NA boxplot KB-1742H10.3 NA chr8 104478539 104480783 - 2245 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KB-1742H10.3 NA 0.282 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-107I14.4 NA chr10 101252821 101263550 - 10730 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-107I14.4 NA 0.012 90-100% NA NA Breast_cancer,PAAD NA NA boxplot RP11-420K14.1 NA chr19 21637974 21656300 + 18327 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-420K14.1 NA 0.259 10-20% Testis 2.123202024 CRC,HCC,Normal,PAAD NA NA boxplot RP11-206F17.2 NA chr4 152927446 152928207 + 762 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-206F17.2 NA 0.929 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(down),PAAD(down) NA boxplot BNIP3P16 BCL2/adenovirus E1B 19kDa interacting protein 3 pseudogene 16 chr19 20175013 20177063 - 2051 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=BNIP3P16 NA 0.012 30-40% NA NA CRC NA NA boxplot CTAGE3P CTAGE family member 3, pseudogene chr13 51908218 51910621 - 2404 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTAGE3P NA 0.035 20-30% Testis 3.096041431 CRC,Normal NA NA boxplot RP11-57A19.4 NA chr16 28659696 28740781 - 81086 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-57A19.4 NA 0.024 60-70% NA NA CRC NA NA boxplot RP11-272J7.4 NA chr10 43777562 43778825 - 1264 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-272J7.4 NA 0.024 70-80% Testis 4.906892038 HCC,Normal NA NA boxplot FAM225B family with sequence similarity 225 member B (non-protein coding) chr9 113103338 113111500 - 8163 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FAM225B NA 0.412 30-40% Testis 3.450499726 Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP4-740C4.7 NA chr1 2363061 2363628 - 568 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-740C4.7 NA 0.071 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot NEFLP1 neurofilament, light polypeptide pseudogene 1 chrY 21221106 21222089 - 984 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NEFLP1 NA 0.141 40-50% Spleen 4.906892038 CRC,HCC,Normal,PAAD NA NA boxplot AC007881.4 NA chr2 71178587 71178773 + 187 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC007881.4 NA 0.118 80-90% NA NA CRC,HCC,PAAD NA NA boxplot RNU6ATAC35P RNA, U6atac small nuclear 35, pseudogene chr1 220825620 220826063 + 444 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RNU6ATAC35P NA 0.012 80-90% NA NA CRC NA NA boxplot RP11-245J9.4 NA chr3 64011964 64016246 + 4283 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-245J9.4 NA 0.094 80-90% NA NA CRC,HCC,Normal,PAAD NA NA boxplot ZNRD1ASP NA chr6 30001011 30061640 - 60630 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ZNRD1ASP exo_circ_031071 0.918 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot UBE2Q2P12 ubiquitin conjugating enzyme E2Q family member 2 pseudogene 12 chr15 84491480 84500599 - 9120 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=UBE2Q2P12 NA 0.035 90-100% NA NA Normal NA NA boxplot RP11-109P14.9 NA chr1 37799720 37800879 - 1160 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-109P14.9 NA 0.141 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-486O13.5 NA chr14 70230224 70232426 + 2203 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-486O13.5 NA 0.294 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-38G5.4 NA chr15 79843547 79844304 - 758 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-38G5.4 NA 0.118 70-80% NA NA CRC,HCC,Normal NA NA boxplot MIR181A2HG MIR181A2 host gene chr9 124658467 124698631 + 40165 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MIR181A2HG NA 0.294 30-40% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-18H7.1 NA chr3 120094895 120136783 + 41889 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-18H7.1 NA 0.412 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot LINC01374 long intergenic non-protein coding RNA 1374 chr10 89853906 89914948 + 61043 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01374 NA 0.106 50-60% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot RP11-90B9.2 NA chr15 83022236 83024336 - 2101 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-90B9.2 NA 0.059 80-90% NA NA Breast_cancer,CRC,Normal NA NA boxplot CTD-3126B10.5 NA chr16 2620222 2621794 - 1573 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-3126B10.5 NA 0.035 80-90% NA NA CRC NA NA boxplot RP11-536C10.10 NA chr14 18698639 18699978 - 1340 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-536C10.10 NA 0.012 60-70% NA NA Normal NA NA boxplot CTD-3222D19.11 NA chr19 16551773 16552328 + 556 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-3222D19.11 NA 0.165 30-40% NA NA HCC,Normal NA NA boxplot RP11-24M17.4 NA chr15 75737820 75763321 + 25502 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-24M17.4 NA 0.071 70-80% Testis 3.311469156 Breast_cancer,Normal,PAAD NA NA boxplot RP11-640N20.9 NA chr17 32106330 32114125 - 7796 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-640N20.9 NA 0.024 40-50% Testis 4.651040184 HCC NA NA boxplot RP11-285E9.6 NA chr17 77257737 77281897 - 24161 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-285E9.6 NA 0.047 40-50% NA NA Breast_cancer,HCC,PAAD NA NA boxplot RSL24D1P11 ribosomal L24 domain containing 1 pseudogene 11 chr18 57838476 57838966 + 491 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RSL24D1P11 NA 0.012 80-90% NA NA NA NA NA boxplot HNRNPA1P6 heterogeneous nuclear ribonucleoprotein A1 pseudogene 6 chr1 58047889 58049335 - 1447 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HNRNPA1P6 NA 0.012 30-40% Brain 4.906892038 Normal NA NA boxplot AC007750.5 NA chr2 162159762 162173223 + 13462 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC007750.5 exo_circ_048534 0.059 40-50% NA NA Breast_cancer,CRC,Normal,PAAD NA NA boxplot RP11-496H1.1 NA chr3 197634315 197635811 + 1497 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-496H1.1 NA 0.412 70-80% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-539L10.2 NA chr4 6687448 6690519 - 3072 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-539L10.2 NA 0.824 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-431N15.2 NA chrX 56618391 56624458 + 6068 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-431N15.2 NA 0.188 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-214F16.8 NA chr13 99498524 99501315 + 2792 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-214F16.8 NA 0.082 70-80% NA NA Breast_cancer,CRC,Normal NA NA boxplot AC084082.3 NA chr8 66112667 66115207 + 2541 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC084082.3 NA 0.024 80-90% Testis 4.754438122 Breast_cancer,Normal NA NA boxplot AE000658.22 NA chr14 21521083 21522660 + 1578 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AE000658.22 NA 0.059 80-90% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-394I13.1 NA chr2 174025280 174027163 + 1884 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-394I13.1 NA 0.059 40-50% NA NA Breast_cancer,CRC,HCC,PAAD NA NA boxplot RP11-10O17.3 NA chr15 74489602 74516959 + 27358 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-10O17.3 NA 0.365 30-40% Testis 3.183073914 CRC,HCC,Normal,PAAD NA NA boxplot RP4-666F24.3 NA chr1 115099672 115102658 + 2987 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-666F24.3 NA 0.2 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-667M19.2 NA chr11 113770393 113771691 - 1299 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-667M19.2 NA 0.094 40-50% NA NA CRC,Normal,PAAD NA NA boxplot RP1-60O19.2 NA chr6 106695535 106699994 + 4460 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-60O19.2 NA 0.012 80-90% NA NA Breast_cancer NA NA boxplot TCEB2P1 transcription elongation factor B (SIII), polypeptide 2 (18kDa, elongin B) pseudogene 1 chr13 25365799 25366155 - 357 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TCEB2P1 NA 0.012 70-80% Testis 4.567976407 Breast_cancer,Normal NA NA boxplot RP11-93B14.6 NA chr20 62640719 62643304 - 2586 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-93B14.6 NA 0.094 70-80% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RPSAP17 ribosomal protein SA pseudogene 17 chr1 154378207 154379089 - 883 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPSAP17 NA 0.059 90-100% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot SYNJ2-IT1 SYNJ2 intronic transcript 1 chr6 158001107 158002383 + 1277 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SYNJ2-IT1 NA 0.047 40-50% Testis 4.906892038 Breast_cancer,CRC,HCC NA NA boxplot RP11-530N7.3 NA chr17 6954098 6978960 - 24863 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-530N7.3 NA 0.094 30-40% NA NA HCC,Normal,PAAD NA NA boxplot LINC01504 long intergenic non-protein coding RNA 1504 chr9 72305430 72343210 + 37781 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01504 NA 0.835 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up),CRC(down) NA boxplot RPL23AP64 ribosomal protein L23a pseudogene 64 chr11 119003012 119003446 - 435 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL23AP64 NA 0.012 20-30% NA NA Breast_cancer,HCC NA NA boxplot RP5-1112D6.8 NA chr6 111309203 111313517 + 4315 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-1112D6.8 NA 0.224 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RPS12P27 ribosomal protein S12 pseudogene 27 chr16 68209442 68209778 + 337 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPS12P27 NA 0.176 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-407A16.7 NA chr12 126690479 126695832 + 5354 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-407A16.7 NA 0.035 10-20% Testis 4.906892038 Breast_cancer,CRC,Normal NA NA boxplot RP11-283G6.4 NA chr12 26211164 26335856 - 124693 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-283G6.4 NA 0.129 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot MAMDC2-AS1 MAMDC2 antisense RNA 1 chr9 70033921 70175888 - 141968 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MAMDC2-AS1 NA 0.106 70-80% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CTD-2525I3.3 NA chr19 52222225 52231294 - 9070 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2525I3.3 NA 0.247 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot LRRC37A16P leucine-rich repeat containing 37 member A16, pseudogene chr17 68125777 68152468 - 26692 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LRRC37A16P NA 0.659 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot FAR2P2 fatty acyl-CoA reductase 2 pseudogene 2 chr2 130416755 130431363 - 14609 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FAR2P2 NA 0.847 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up),CRC(up),HCC(up),PAAD(up) NA boxplot RPL21P121 ribosomal protein L21 pseudogene 121 chr17 18312760 18313533 + 774 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL21P121 exo_circ_051788 0.012 90-100% NA NA HCC NA NA boxplot RP11-177H2.2 NA chr8 10840576 10846501 + 5926 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-177H2.2 NA 0.012 70-80% Testis 4.760934559 CRC NA NA boxplot RPSAP3 ribosomal protein SA pseudogene 3 chr14 76634775 76635661 - 887 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPSAP3 exo_circ_022846 0.259 90-100% NA NA CHD,HCC,Normal,PAAD NA NA boxplot MAGOH2P mago homolog 2, pseudogene chr17 10716002 10716511 - 510 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MAGOH2P NA 0.059 40-50% NA NA CRC,HCC,Normal NA NA boxplot LINC00359 long intergenic non-protein coding RNA 359 chr13 96941281 96984172 - 42892 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00359 NA 0.129 30-40% Testis 3.390295438 CRC,HCC,Normal NA NA boxplot WIZP1 widely interspaced zinc finger motifs pseudogene 1 chr11 23403805 23406103 + 2299 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=WIZP1 NA 0.012 70-80% NA NA Breast_cancer,PAAD NA NA boxplot RP11-817I4.2 NA chr12 32352349 32354144 + 1796 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-817I4.2 NA 0.141 40-50% NA NA CRC,Normal,PAAD NA NA boxplot GRIK1-AS1 GRIK1 antisense RNA 1 chr21 29748175 29764002 + 15828 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GRIK1-AS1 NA 0.012 50-60% NA NA Breast_cancer,Normal NA NA boxplot RP11-795H16.2 NA chr18 60196555 60198172 + 1618 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-795H16.2 NA 0.012 90-100% Testis 4.906892038 Breast_cancer,HCC NA NA boxplot RP11-463J10.2 NA chr14 51916145 51918571 - 2427 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-463J10.2 NA 0.024 80-90% Testis 4.906892038 CRC,Normal NA NA boxplot RP11-65J21.4 NA chr16 14408039 14418872 - 10834 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-65J21.4 NA 0.012 70-80% NA NA NA NA NA boxplot CTD-2527I21.14 NA chr19 35014961 35025335 - 10375 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2527I21.14 NA 0.012 20-30% NA NA Normal NA NA boxplot RP3-518E13.2 NA chr1 175307218 175335459 + 28242 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-518E13.2 NA 0.024 80-90% Testis 2.849331886 CRC,PAAD NA NA boxplot PRKG1-AS1 PRKG1 antisense RNA 1 chr10 52230742 52314128 - 83387 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PRKG1-AS1 exo_circ_056152,exo_circ_028225,exo_circ_050635,exo_circ_031973,exo_circ_056153 0.529 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot CTD-2358C21.5 NA chr16 31704728 31705260 + 533 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2358C21.5 NA 0.012 10-20% NA NA PAAD NA NA boxplot RP13-516M14.2 NA chr17 82214227 82217352 + 3126 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP13-516M14.2 NA 0.047 80-90% NA NA Breast_cancer,CRC,HCC NA NA boxplot RP11-95J11.1 NA chr16 3840528 3841010 + 483 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-95J11.1 NA 0.012 0-10% Brain 4.906892038 Normal NA NA boxplot RP11-817O13.8 NA chr15 75368155 75369584 + 1430 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-817O13.8 NA 0.506 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC000068.5 NA chr22 19447893 19450105 + 2213 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC000068.5 NA 0.235 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot MIR3945HG MIR3945 host gene chr4 184844585 184855751 - 11167 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MIR3945HG NA 0.459 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot LINC00844 long intergenic non-protein coding RNA 844 chr10 58999626 59001543 + 1918 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00844 NA 0.071 10-20% NA NA HCC,PAAD NA NA boxplot RP11-505K9.1 NA chr16 84117051 84117571 + 521 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-505K9.1 NA 0.2 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-434B12.1 NA chr2 8721134 8722686 - 1553 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-434B12.1 NA 0.153 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP4-781K5.6 NA chr1 234669523 234696153 - 26631 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-781K5.6 NA 0.047 60-70% Vagina 2.074239924 Breast_cancer,CRC,HCC NA NA boxplot PDCD6IPP1 PDCD6IP pseudogene 1 chr15 22727104 22744918 + 17815 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PDCD6IPP1 NA 0.388 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP5-967N21.11 NA chr20 6000418 6000941 + 524 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-967N21.11 NA 0.224 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot HIGD1AP14 HIG1 hypoxia inducible domain family member 1A pseudogene 14 chr4 109673843 109674124 + 282 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HIGD1AP14 NA 0.388 80-90% NA NA CRC,HCC,Normal,PAAD NA NA boxplot ANOS2P anosmin 2, pseudogene chrY 13751656 13915824 + 164169 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ANOS2P NA 0.412 10-20% NA NA CRC,HCC,Normal,PAAD NA NA boxplot LINC00221 long intergenic non-protein coding RNA 221 chr14 106482439 106521073 + 38635 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00221 NA 0.024 60-70% Testis 4.836079875 HCC,Normal NA NA boxplot NBPF13P neuroblastoma breakpoint family member 13, pseudogene chr1 147099482 147124285 - 24804 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NBPF13P NA 0.329 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-89C3.4 NA chr11 111091932 111179641 - 87710 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-89C3.4 NA 0.141 50-60% Testis 1.561911512 CRC,HCC,Normal,PAAD NA NA boxplot LINC01470 long intergenic non-protein coding RNA 1470 chr5 152618965 153223543 - 604579 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01470 NA 0.282 20-30% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot ITGB1P1 integrin subunit beta 1 pseudogene 1 chr19 14621634 14622242 - 609 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ITGB1P1 NA 0.953 0-10% NA NA CHD,CRC,HCC,Normal,PAAD CHD(down),CRC(up) NA boxplot RP1-29C18.8 NA chr22 49612657 49615716 - 3060 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-29C18.8 NA 0.435 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC135048.13 NA chr16 30948386 30956511 + 8126 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC135048.13 NA 0.906 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(up) NA boxplot RP11-206L10.17 NA chr1 720024 720206 - 183 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-206L10.17 NA 0.012 80-90% NA NA PAAD NA NA boxplot ANKRD26P3 ankyrin repeat domain 26 pseudogene 3 chr13 19290593 19344825 - 54233 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ANKRD26P3 NA 0.047 10-20% Testis 4.601871156 Breast_cancer,CRC,HCC,Normal NA NA boxplot IMMTP1 inner membrane protein, mitochondrial (mitofilin) pseudogene 1 chr21 44675868 44678086 - 2219 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=IMMTP1 NA 0.012 90-100% NA NA Breast_cancer NA NA boxplot RP4-635E18.7 NA chr1 11068471 11073097 + 4627 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-635E18.7 NA 0.141 40-50% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot RP11-69L16.4 NA chr6 7276031 7298872 + 22842 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-69L16.4 NA 0.4 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-480A16.1 NA chr3 195949188 195952695 - 3508 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-480A16.1 NA 0.106 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP1-117B12.4 NA chr17 50396438 50397888 + 1451 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-117B12.4 NA 0.153 80-90% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot THAP12P2 NA chr3 86012561 86015120 + 2560 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=THAP12P2 NA 0.024 70-80% NA NA HCC NA NA boxplot ALMS1P1 ALMS1, centrosome and basal body associated protein pseudogene 1 chr2 73644919 73685576 + 40658 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ALMS1P1 NA 0.388 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot ZBTB8OSP2 zinc finger and BTB domain containing 8 opposite strand pseudogene 2 chr2 231433923 231434426 - 504 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ZBTB8OSP2 NA 0.2 70-80% Testis 4.473875042 CRC,HCC,Normal,PAAD NA NA boxplot ZFPM2-AS1 ZFPM2 antisense RNA 1 chr8 105780246 106060524 - 280279 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ZFPM2-AS1 exo_circ_010438 0.2 0-10% NA NA CRC,HCC,Normal,PAAD NA NA boxplot FAM66C family with sequence similarity 66 member C chr12 8180209 8216151 + 35943 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FAM66C NA 0.541 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD PAAD(up) NA boxplot RP11-392E22.11 NA chr9 38542479 38568422 - 25944 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-392E22.11 NA 0.047 30-40% NA NA CRC,HCC,PAAD NA NA boxplot RPL31P15 ribosomal protein L31 pseudogene 15 chr2 182788098 182788435 + 338 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL31P15 NA 0.047 90-100% NA NA CRC,Normal NA NA boxplot RP11-650K20.3 NA chr12 103841451 103844664 + 3214 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-650K20.3 NA 0.141 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot SIRPB3P signal-regulatory protein beta 3, pseudogene chr20 1665283 1708200 - 42918 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SIRPB3P NA 0.165 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CTD-2024P10.1 NA chr5 34656412 34657250 - 839 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2024P10.1 NA 0.224 60-70% Spleen 4.906892038 CRC,HCC,Normal,PAAD NA NA boxplot RP1-228P16.7 NA chr12 48085062 48085421 + 360 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-228P16.7 NA 0.024 90-100% Testis 4.906892038 CRC NA NA boxplot XXbac-BPG249D20.9 NA chr6 30516266 30519217 + 2952 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=XXbac-BPG249D20.9 NA 0.8 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down),HCC(down) NA boxplot SALL4P7 spalt-like transcription factor 4 pseudogene 7 chr14 60493766 60496885 - 3120 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SALL4P7 NA 0.024 20-30% Pituitary 3.772446396 Breast_cancer,CRC,PAAD NA NA boxplot RP11-512M8.11 NA chr12 122255119 122260274 - 5156 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-512M8.11 NA 0.059 0-10% NA NA HCC,Normal,PAAD NA NA boxplot GXYLT1P5 glucoside xylosyltransferase 1 pseudogene 5 chr9 42974855 42978320 + 3466 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GXYLT1P5 NA 0.094 10-20% NA NA Breast_cancer,CHD,HCC,Normal,PAAD NA NA boxplot RP11-244N9.6 NA chr9 97512706 97517836 - 5131 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-244N9.6 NA 0.012 80-90% Testis 4.289441696 Breast_cancer,Normal NA NA boxplot RP11-114F10.2 NA chr12 106050961 106058254 - 7294 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-114F10.2 exo_circ_016802 0.212 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CTD-2102P23.1 NA chr19 52809824 52810708 + 885 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2102P23.1 NA 0.024 60-70% Testis 1.605192598 Breast_cancer,CRC,Normal NA NA boxplot RP11-60I3.4 NA chr9 99915077 99929896 - 14820 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-60I3.4 NA 0.153 30-40% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot RP11-169K17.2 NA chr3 11529488 11529755 - 268 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-169K17.2 NA 0.012 80-90% Fallopian Tube 4.906892038 Breast_cancer,PAAD NA NA boxplot RP11-17P16.1 NA chr4 67607856 67610313 - 2458 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-17P16.1 NA 0.071 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot PA2G4P2 proliferation-associated 2G4 pseudogene 2 chr20 12380056 12381255 + 1200 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PA2G4P2 NA 0.106 80-90% NA NA Breast_cancer,CHD,CRC,HCC,Normal NA NA boxplot RPL5P23 ribosomal protein L5 pseudogene 23 chr8 42341767 42342634 - 868 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL5P23 NA 0.894 50-60% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot H1FX-AS1 H1FX antisense RNA 1 chr3 129315392 129326225 + 10834 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=H1FX-AS1 NA 0.482 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot RP13-122B23.9 NA chr9 137286112 137287236 + 1125 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP13-122B23.9 NA 0.071 50-60% NA NA HCC,Normal,PAAD NA NA boxplot PRKAR1AP1 NA chr1 92125301 92126462 + 1162 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PRKAR1AP1 NA 0.059 50-60% NA NA Normal,PAAD NA NA boxplot CTC-448F2.6 NA chr19 30037423 30038156 + 734 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-448F2.6 NA 0.188 10-20% NA NA CRC,HCC,Normal,PAAD NA NA boxplot LINC00482 long intergenic non-protein coding RNA 482 chr17 81303771 81309248 - 5478 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00482 NA 0.224 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-736N17.10 NA chr14 103208100 103208876 + 777 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-736N17.10 NA 0.012 50-60% NA NA NA NA NA boxplot RP1-153P14.5 NA chr6 37545145 37550860 + 5716 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-153P14.5 NA 0.129 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot DTX2P1 NA chr7 76978617 77004308 + 25692 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DTX2P1 NA 0.894 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-473P24.2 NA chr3 179649494 179650200 - 707 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-473P24.2 NA 0.012 80-90% Brain 4.906892038 NA NA NA boxplot FAM133DP family with sequence similarity 133, member A pseudogene chr2 157379724 157380414 - 691 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FAM133DP NA 0.988 0-10% NA NA CHD,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-802E16.3 NA chr11 68050740 68053762 + 3023 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-802E16.3 NA 0.576 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot HNRNPRP1 heterogeneous nuclear ribonucleoprotein R pseudogene 1 chr10 21624592 21626286 - 1695 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HNRNPRP1 NA 0.871 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP3-522J7.6 NA chr22 49832616 49837786 - 5171 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-522J7.6 NA 0.012 90-100% Testis 1.555500231 Breast_cancer,CRC NA NA boxplot FLG-AS1 FLG antisense RNA 1 chr1 152168125 152445456 + 277332 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FLG-AS1 NA 0.306 20-30% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot CTD-2340D6.1 NA chr8 99119352 99120581 + 1230 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2340D6.1 NA 0.106 70-80% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-158M2.6 NA chr15 85770990 85771163 + 174 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-158M2.6 NA 0.012 80-90% NA NA Breast_cancer NA NA boxplot RP11-27G24.1 NA chr18 59360700 59386749 + 26050 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-27G24.1 NA 0.012 90-100% Muscle 1.808056059 PAAD NA NA boxplot RP11-641D5.1 NA chr3 169483671 169484080 - 410 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-641D5.1 exo_circ_054175 0.929 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-299L17.3 NA chr14 81441987 81450157 - 8171 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-299L17.3 NA 0.024 40-50% NA NA Breast_cancer,HCC NA NA boxplot AC005562.1 NA chr17 30576464 30672789 + 96326 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC005562.1 NA 0.929 0-10% Testis 4.906892038 Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot AC006159.5 NA chr7 116542718 116551969 - 9252 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC006159.5 NA 0.035 30-40% NA NA Breast_cancer,PAAD NA NA boxplot RP11-242C24.2 NA chr12 39466442 39467345 - 904 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-242C24.2 NA 0.047 40-50% Brain 4.906892038 Breast_cancer,CRC,HCC NA NA boxplot RP11-15J10.8 NA chr9 65219987 65230861 - 10875 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-15J10.8 NA 0.012 80-90% NA NA PAAD NA NA boxplot RP11-613D13.4 NA chr11 43921059 44001157 + 80099 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-613D13.4 NA 0.094 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot SERBP1P1 SERPINE1 mRNA binding protein 1 pseudogene 1 chrX 68783472 68785066 + 1595 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SERBP1P1 NA 1 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-370I10.4 NA chr12 48333755 48333901 - 147 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-370I10.4 NA 0.047 80-90% Testis 4.906892038 CRC,Normal,PAAD NA NA boxplot GAPDHP45 glyceraldehyde 3 phosphate dehydrogenase pseudogene 45 chr10 15093263 15093611 - 349 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GAPDHP45 NA 0.012 90-100% Testis 4.906892038 Breast_cancer NA NA boxplot GKN3P gastrokine 3, pseudogene chr2 68921248 68926834 + 5587 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GKN3P NA 0.012 50-60% NA NA HCC,Normal,PAAD NA NA boxplot RP11-597D13.2 NA chr4 158111361 158111931 - 571 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-597D13.2 NA 0.047 80-90% NA NA CRC,Normal NA NA boxplot RP11-265N7.2 NA chr15 39167739 39180048 + 12310 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-265N7.2 NA 0.188 50-60% Testis 4.262021281 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-256L6.3 NA chr12 95996521 96011489 + 14969 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-256L6.3 NA 0.529 10-20% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-317J10.4 NA chr8 85523899 85540511 + 16613 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-317J10.4 NA 0.012 30-40% Testis 4.906892038 Breast_cancer,HCC,Normal NA NA boxplot COX5BP7 cytochrome c oxidase subunit Vb pseudogene 7 chr22 39120293 39120566 - 274 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=COX5BP7 NA 0.082 90-100% NA NA CRC,HCC,Normal NA NA boxplot RP1-199J3.6 NA chr6 99587611 99589898 + 2288 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-199J3.6 NA 0.082 60-70% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot STX18-AS1 STX18 antisense RNA 1 (head to head) chr4 4542131 4710938 + 168808 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=STX18-AS1 NA 0.824 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),PAAD(up) NA boxplot RP11-757G1.6 NA chr11 68870664 68874542 + 3879 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-757G1.6 NA 0.541 10-20% Salivary Gland 1.11118447 Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),PAAD(down) NA boxplot RP11-66D17.3 NA chr1 156687695 156691997 - 4303 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-66D17.3 NA 0.012 30-40% NA NA Breast_cancer,PAAD NA NA boxplot RP11-797H7.5 NA chr7 64888527 64890100 - 1574 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-797H7.5 NA 0.2 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-38L15.3 NA chr10 46582782 46598145 - 15364 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-38L15.3 NA 0.259 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CH507-513H4.1 NA chr21 8197620 8227646 + 30027 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CH507-513H4.1 NA 0.647 0-10% NA NA CRC,HCC,Normal,PAAD HCC(up),PAAD(up) NA boxplot CTC-308K20.3 NA chr5 172975511 172976374 + 864 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-308K20.3 NA 0.859 10-20% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(down),PAAD(down) NA boxplot RP4-734C18.1 NA chr20 11234170 11301525 - 67356 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-734C18.1 NA 0.012 10-20% Testis 4.574496437 PAAD NA NA boxplot RP11-363L24.3 NA chr8 31167078 31177167 - 10090 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-363L24.3 NA 0.071 60-70% Testis 3.963291918 Breast_cancer,CRC,Normal NA NA boxplot RP11-293P20.2 NA chr1 24040835 24086799 + 45965 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-293P20.2 NA 0.094 80-90% NA NA CRC,HCC,Normal NA NA boxplot RP11-144L1.8 NA chr1 158523672 158525838 + 2167 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-144L1.8 NA 0.047 80-90% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-874J12.4 NA chr18 3653410 3656282 + 2873 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-874J12.4 NA 0.894 0-10% Adrenal Gland 2.761538346 Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),HCC(down) NA boxplot TCAF2P1 TRPM8 channel-associated factor 2 pseudogene 1 chr7 143800732 143817973 + 17242 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TCAF2P1 NA 0.565 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot PLS3-AS1 PLS3 antisense RNA 1 chrX 115518182 115562731 - 44550 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PLS3-AS1 NA 0.071 40-50% NA NA HCC,Normal,PAAD NA NA boxplot MACROD2-IT1 MACROD2 intronic transcript 1 chr20 14554384 14636524 + 82141 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MACROD2-IT1 NA 0.012 80-90% Testis 4.906892038 Breast_cancer,HCC NA NA boxplot RP11-624L12.1 NA chr10 93284004 93284558 - 555 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-624L12.1 NA 0.224 90-100% NA NA CRC,HCC,Normal,PAAD NA NA boxplot TAF9BP1 TATA-box binding protein associated factor 9b pseudogene 1 chr3 25754925 25755670 + 746 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TAF9BP1 NA 0.047 40-50% NA NA CHD,Normal,PAAD NA NA boxplot RP11-205K6.3 NA chr9 126518840 126520773 + 1934 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-205K6.3 NA 0.012 20-30% NA NA Breast_cancer,Normal,PAAD NA NA boxplot APOOP5 apolipoprotein O pseudogene 5 chr16 59709993 59755026 - 45034 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=APOOP5 NA 0.024 90-100% Testis 4.906892038 HCC,Normal NA NA boxplot RP11-173D3.1 NA chr15 20128745 20147953 - 19209 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-173D3.1 NA 0.047 20-30% NA NA Breast_cancer,HCC,PAAD NA NA boxplot CH507-528H12.1 NA chr21 8380665 8410645 + 29981 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CH507-528H12.1 NA 0.835 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CRC(up),HCC(up),PAAD(up) NA boxplot OR7E128P olfactory receptor family 7 subfamily E member 128 pseudogene chr11 71893410 71894433 + 1024 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=OR7E128P NA 0.035 90-100% NA NA HCC,Normal NA NA boxplot RP11-203I16.7 NA chr13 49232874 49234399 + 1526 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-203I16.7 NA 0.012 20-30% NA NA NA NA NA boxplot KRT8P34 keratin 8 pseudogene 34 chr17 39835037 39836080 - 1044 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KRT8P34 NA 0.176 40-50% NA NA Breast_cancer,CRC,Normal,PAAD NA NA boxplot PA2G4P1 proliferation-associated 2G4 pseudogene 1 chrX 120868611 120869807 - 1197 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PA2G4P1 NA 0.835 40-50% Testis 4.111881862 Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot AC004383.3 NA chrX 134522702 134522990 + 289 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC004383.3 NA 0.059 30-40% NA NA CRC,Normal,PAAD NA NA boxplot GXYLT1P4 glucoside xylosyltransferase 1 pseudogene 4 chr9 66022661 66027719 - 5059 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GXYLT1P4 NA 0.106 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-603J24.17 NA chr12 56104614 56113905 - 9292 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-603J24.17 NA 0.612 10-20% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot RP11-91P24.3 NA chr11 77914990 77915275 - 286 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-91P24.3 NA 0.047 60-70% NA NA CRC,Normal NA NA boxplot RP5-965G21.5 NA chr20 25251008 25251304 - 297 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-965G21.5 NA 0.012 90-100% NA NA Normal,PAAD NA NA boxplot SLC8A1-AS1 SLC8A1 antisense RNA 1 chr2 39786453 40255209 + 468757 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SLC8A1-AS1 NA 0.176 40-50% Testis 1.400279133 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-785D18.3 NA chr12 70570969 70571440 + 472 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-785D18.3 NA 0.235 40-50% NA NA HCC,Normal,PAAD NA NA boxplot NDUFB10P2 NADH:ubiquinone oxidoreductase subunit B10 pseudogene 2 chr7 141351977 141352768 + 792 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NDUFB10P2 NA 0.024 10-20% NA NA PAAD NA NA boxplot RP11-511I11.2 NA chr2 63083008 63087322 + 4315 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-511I11.2 NA 0.012 90-100% NA NA NA NA NA boxplot RP11-454F8.4 NA chr16 53310797 53311989 + 1193 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-454F8.4 NA 0.035 20-30% NA NA Breast_cancer,Normal,PAAD NA NA boxplot STT3A-AS1 STT3A antisense RNA 1 chr11 125570284 125592568 - 22285 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=STT3A-AS1 NA 0.035 70-80% Testis 2.905283761 CRC,Normal NA NA boxplot RP13-297E16.5 NA chrY 1767347 1768776 + 1430 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP13-297E16.5 NA 0.024 40-50% Spleen 4.033406921 CRC,PAAD NA NA boxplot CTD-2292M14.1 NA chr5 74084068 74103216 - 19149 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2292M14.1 NA 0.024 60-70% Salivary Gland 4.331306097 HCC NA NA boxplot SSU72P5 SSU72 pseudogene 5 chr11 4233286 4233869 + 584 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SSU72P5 NA 0.012 90-100% NA NA PAAD NA NA boxplot ZNF197-AS1 ZNF197 antisense RNA 1 chr3 44617128 44624797 - 7670 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ZNF197-AS1 NA 0.106 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-158M2.5 NA chr15 85754941 85756237 - 1297 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-158M2.5 NA 0.024 50-60% NA NA Breast_cancer,PAAD NA NA boxplot ABC12-49244600F4.4 NA chr12 7115736 7116486 - 751 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ABC12-49244600F4.4 NA 0.188 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-38C18.3 NA chr1 165215980 165219104 + 3125 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-38C18.3 NA 0.012 70-80% Testis 4.906892038 Normal NA NA boxplot WDR82P1 WD repeat domain 82 pseudogene 1 chr3 94937086 94938024 - 939 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=WDR82P1 NA 0.694 10-20% Testis 1.238452381 Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up),CRC(down),HCC(down),PAAD(down) NA boxplot RP1-161P9.5 NA chr17 35757199 35758325 - 1127 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-161P9.5 NA 0.035 70-80% NA NA Normal NA NA boxplot RP11-73G16.2 NA chr4 151919468 151943933 + 24466 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-73G16.2 NA 0.459 20-30% Skin 4.582778639 CRC,HCC,Normal,PAAD NA NA boxplot RP11-8J23.1 NA chr3 143855739 143856142 - 404 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-8J23.1 NA 0.012 70-80% NA NA PAAD NA NA boxplot RP11-96K19.5 NA chr1 110963302 110964649 + 1348 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-96K19.5 NA 0.176 20-30% Testis 1.392997169 CRC,HCC,Normal NA NA boxplot RP11-720N19.1 NA chr17 27526386 27527223 - 838 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-720N19.1 NA 0.118 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-365O16.3 NA chr1 224208747 224213279 - 4533 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-365O16.3 NA 0.306 30-40% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot SUZ12P1 SUZ12 polycomb repressive complex 2 subunit pseudogene 1 chr17 30709299 30790908 + 81610 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SUZ12P1 NA 0.988 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-936I5.1 NA chr17 77373818 77377236 - 3419 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-936I5.1 NA 0.259 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot FAM21FP family with sequence similarity 21, member F, pseudogene chr10 45706431 45727231 - 20801 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FAM21FP NA 0.718 40-50% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot AC011247.3 NA chr2 38601598 38602178 + 581 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC011247.3 NA 0.035 60-70% NA NA Breast_cancer,CRC,Normal NA NA boxplot RP11-463I20.1 NA chr15 34978351 34980084 + 1734 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-463I20.1 NA 0.212 0-10% NA NA HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot RP11-764E7.1 NA chr2 193898367 193899394 + 1028 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-764E7.1 NA 0.012 80-90% NA NA NA NA NA boxplot CTD-3076M17.1 NA chr16 20487702 20489659 + 1958 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-3076M17.1 NA 0.012 10-20% NA NA Breast_cancer,PAAD NA NA boxplot RP11-254A24.2 NA chr4 91603275 91605292 + 2018 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-254A24.2 NA 0.047 80-90% NA NA HCC,Normal NA NA boxplot RPL31P61 ribosomal protein L31 pseudogene 61 chr19 36901742 36902117 + 376 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL31P61 NA 0.012 90-100% Testis 1.124695333 Breast_cancer,CRC NA NA boxplot RP11-126K1.8 NA chr1 151340648 151341966 + 1319 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-126K1.8 NA 0.2 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-42I10.1 NA chr16 48623436 48744921 + 121486 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-42I10.1 NA 0.412 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot FAM85B family with sequence similarity 85 member B chr8 8167819 8226614 - 58796 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FAM85B NA 0.082 40-50% NA NA CRC,HCC,Normal NA NA boxplot RP11-1334A24.6 NA chr5 177494995 177503647 + 8653 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1334A24.6 exo_circ_022015 0.329 10-20% Whole Blood 2.308022793 CRC,HCC,Normal CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot RP11-536L3.4 NA chr1 205091163 205091946 + 784 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-536L3.4 NA 0.012 40-50% NA NA Breast_cancer,HCC,Normal NA NA boxplot RP11-474L23.3 NA chr12 88057876 88058578 - 703 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-474L23.3 NA 0.071 30-40% Testis 1.832932197 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-440D17.3 NA chr2 95525109 95526702 - 1594 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-440D17.3 NA 0.388 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-707P17.1 NA chr15 51414097 51498833 + 84737 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-707P17.1 NA 0.106 60-70% Nerve 3.248805014 HCC,Normal,PAAD NA NA boxplot EMC3-AS1 EMC3 antisense RNA 1 chr3 9986893 10006990 + 20098 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=EMC3-AS1 NA 0.753 10-20% NA NA CHD,CRC,HCC,Normal,PAAD CHD(up),PAAD(up) NA boxplot HMGN2P41 high mobility group nucleosomal binding domain 2 pseudogene 41 chr16 35802869 35803280 - 412 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HMGN2P41 NA 0.071 0-10% Testis 4.906892038 Breast_cancer,CHD,Normal CHD(up) NA boxplot RP1-130L23.1 NA chr11 33403216 33403605 + 390 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-130L23.1 NA 0.024 20-30% Brain 4.906892038 Breast_cancer,PAAD NA NA boxplot RP11-467L13.4 NA chr12 31748100 31748240 - 141 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-467L13.4 NA 0.212 40-50% Colon 4.906892038 CRC,HCC,Normal,PAAD NA NA boxplot RP11-545P6.2 NA chr13 88142867 88236082 + 93216 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-545P6.2 NA 0.012 40-50% NA NA Normal NA NA boxplot NKILA NF-kappaB interacting long non-coding RNA chr20 57710183 57712780 + 2598 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NKILA NA 0.247 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot TMEM44-AS1 TMEM44 antisense RNA 1 chr3 194584011 194590260 + 6250 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TMEM44-AS1 NA 0.812 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up) NA boxplot LINC00989 long intergenic non-protein coding RNA 989 chr4 79492416 79576460 + 84045 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00989 exo_circ_016164 1 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down),HCC(down) NA boxplot H3F3BP1 H3 histone, family 3B (H3.3B) pseudogene 1 chr13 71675067 71675469 + 403 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=H3F3BP1 NA 0.953 0-10% Testis 4.05730009 CHD,CRC,HCC,Normal,PAAD CHD(up),CRC(up),HCC(up),PAAD(up) NA boxplot RP11-770J1.7 NA chr11 118415977 118416521 + 545 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-770J1.7 NA 0.035 70-80% NA NA CRC,HCC NA NA boxplot LINC01348 long intergenic non-protein coding RNA 1348 chr1 235065479 235074220 - 8742 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01348 NA 0.035 60-70% NA NA Breast_cancer,CRC,PAAD NA NA boxplot RP11-554A11.7 NA chr11 69103493 69109094 + 5602 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-554A11.7 NA 0.024 70-80% NA NA Breast_cancer,CRC NA NA boxplot PPIAP19 peptidylprolyl isomerase A (cyclophilin A) pseudogene 19 chr10 114690143 114690634 - 492 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PPIAP19 NA 0.435 80-90% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot HMGB1P21 high mobility group box 1 pseudogene 21 chr5 78644265 78644845 - 581 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HMGB1P21 NA 0.094 10-20% NA NA CRC,Normal,PAAD NA NA boxplot FAM91A3P family with sequence similarity 91, member A3 pseudogene chr1 143766540 143769083 + 2544 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FAM91A3P NA 0.788 20-30% NA NA CHD,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(up),PAAD(down) NA boxplot RP3-333H23.8 NA chr22 39292988 39295563 + 2576 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-333H23.8 NA 0.012 20-30% Testis 4.58300387 Breast_cancer,Normal NA NA boxplot LAMTOR5-AS1 LAMTOR5 antisense RNA 1 chr1 110347116 110443817 + 96702 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LAMTOR5-AS1 NA 0.647 0-10% Testis 1.369305896 Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),PAAD(up) NA boxplot RP11-66B24.5 NA chr15 100716249 100828497 + 112249 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-66B24.5 NA 0.012 80-90% Kidney 4.906892038 Normal NA NA boxplot RP11-572C21.1 NA chr12 129852208 129854944 - 2737 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-572C21.1 NA 0.012 10-20% Testis 4.870584354 Breast_cancer,HCC NA NA boxplot RP11-316M21.6 NA chr10 100229667 100234000 + 4334 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-316M21.6 NA 0.059 70-80% Testis 3.378708555 CRC,HCC,Normal,PAAD NA NA boxplot RP11-383C5.8 NA chr10 125707416 125749525 - 42110 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-383C5.8 NA 0.188 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-517I3.1 NA chr5 126433505 126490371 - 56867 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-517I3.1 NA 0.071 70-80% NA NA CRC,HCC,Normal NA NA boxplot bP-21201H5.1 NA chr21 9975017 10119309 - 144293 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=bP-21201H5.1 NA 0.165 80-90% Testis 4.906892038 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP5-1021I20.5 NA chr14 73896164 73938114 - 41951 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-1021I20.5 NA 0.235 30-40% Testis 1.358485025 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot PSMD5-AS1 PSMD5 antisense RNA 1 (head to head) chr9 120824828 120851355 + 26528 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PSMD5-AS1 NA 0.976 0-10% NA NA CHD,CRC,HCC,Normal,PAAD CHD(up),CRC(down),HCC(down) NA boxplot RP11-44N22.3 NA chr2 73113018 73115907 + 2890 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-44N22.3 NA 0.047 40-50% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot TMEM26-AS1 TMEM26 antisense RNA 1 chr10 61452639 61481956 + 29318 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TMEM26-AS1 NA 0.129 20-30% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot CCNL2P1 cyclin L2 pseudogene 1 chr4 42561457 42562425 - 969 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CCNL2P1 exo_circ_044054 0.141 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot MROH3P maestro heat-like repeat family member 3, pseudogene chr1 200917460 200966668 + 49209 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MROH3P NA 0.047 40-50% NA NA Breast_cancer,HCC,PAAD NA NA boxplot LINC00893 long intergenic non-protein coding RNA 893 chrX 149527591 149540959 - 13369 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00893 NA 0.412 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC104113.3 NA chr5 60917490 60919573 + 2084 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC104113.3 NA 0.012 90-100% Testis 4.688517639 HCC,Normal NA NA boxplot FOSL1P1 FOS-like antigen 1 pseudogene 1 chr4 128155389 128156204 + 816 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FOSL1P1 NA 0.012 50-60% NA NA Breast_cancer,Normal NA NA boxplot XXbac-BPG294E21.9 NA chr6 33437363 33454453 - 17091 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=XXbac-BPG294E21.9 NA 0.224 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-76P2.4 NA chr10 94314907 94315327 - 421 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-76P2.4 NA 0.012 90-100% NA NA CRC NA NA boxplot RP11-434H6.2 NA chr3 129045763 129046921 + 1159 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-434H6.2 NA 0.012 20-30% NA NA Breast_cancer,Normal,PAAD NA NA boxplot CTD-2376I4.1 NA chr5 72953635 72954274 - 640 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2376I4.1 NA 0.024 20-30% NA NA Normal NA NA boxplot RP11-314C9.1 NA chr2 38121935 38123881 - 1947 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-314C9.1 NA 0.059 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot ERICD E2F1-regulated inhibitor of cell death (non-protein coding) chr8 140636281 140638283 + 2003 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ERICD NA 0.129 40-50% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot RP11-680F20.4 NA chr11 125940496 125941193 - 698 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-680F20.4 NA 0.012 70-80% NA NA Breast_cancer,PAAD NA NA boxplot RP11-684B21.1 NA chr15 36046082 36049529 + 3448 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-684B21.1 NA 0.024 30-40% Testis 4.746223049 PAAD NA NA boxplot B4GALT1-AS1 B4GALT1 antisense RNA 1 chr9 33166975 33179983 + 13009 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=B4GALT1-AS1 NA 0.741 10-20% NA NA CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP3-510D11.2 NA chr1 9182004 9196284 + 14281 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-510D11.2 NA 0.094 30-40% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot RP11-17A19.2 NA chr18 26688111 26689668 + 1558 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-17A19.2 NA 0.024 80-90% NA NA CRC,HCC NA NA boxplot RPL35P5 ribosomal protein L35 pseudogene 5 chr7 66606738 66607107 - 370 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL35P5 NA 1 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-7M8.2 NA chr12 121856259 121857059 + 801 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-7M8.2 NA 0.024 30-40% NA NA Breast_cancer,HCC NA NA boxplot RPL9P28 ribosomal protein L9 pseudogene 28 chr17 48691116 48691694 - 579 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL9P28 NA 0.047 90-100% NA NA CHD,Normal NA NA boxplot CTD-2026D20.3 NA chr17 47450568 47492492 - 41925 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2026D20.3 NA 0.553 10-20% NA NA CRC,HCC,Normal,PAAD CHD(down),HCC(down),PAAD(up) NA boxplot AC008937.3 NA chr5 56900041 56910714 - 10674 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC008937.3 NA 0.012 70-80% Testis 1.650647077 Breast_cancer,HCC NA NA boxplot RP11-303E16.9 NA chr16 80982319 80984094 - 1776 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-303E16.9 NA 0.047 10-20% NA NA CRC,PAAD NA NA boxplot CTD-2129N1.1 NA chr15 40874433 40874595 + 163 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2129N1.1 NA 0.012 90-100% NA NA NA NA NA boxplot HSP90AB3P heat shock protein 90kDa alpha family class B member 3, pseudogene chr4 87891843 87894015 + 2173 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HSP90AB3P NA 0.976 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-139K4.2 NA chr3 182498264 182507124 - 8861 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-139K4.2 NA 0.024 40-50% Testis 4.818621715 HCC,Normal NA NA boxplot ZEB2P1 zinc finger E-box binding homeobox 2 pseudogene 1 chr4 16360686 16397323 - 36638 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ZEB2P1 NA 0.012 50-60% NA NA Breast_cancer,HCC NA NA boxplot CTB-25B13.12 NA chr19 1457670 1458580 - 911 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTB-25B13.12 NA 0.788 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),HCC(up) NA boxplot ZFX-AS1 ZFX antisense RNA 1 chrX 24146225 24149654 - 3430 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ZFX-AS1 NA 0.035 80-90% NA NA Breast_cancer,CRC,Normal NA NA boxplot CEACAM22P carcinoembryonic antigen-related cell adhesion molecule 22, pseudogene chr19 44537058 44620821 - 83764 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CEACAM22P exo_circ_034768 0.235 30-40% Testis 1.809072003 Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot AC010890.1 NA chr2 133264968 133284762 + 19795 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC010890.1 NA 0.094 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP13-216E22.5 NA chrX 73958059 73969485 - 11427 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP13-216E22.5 NA 0.012 30-40% NA NA Normal NA NA boxplot RP11-798K3.3 NA chr15 66931537 66956518 - 24982 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-798K3.3 NA 0.012 90-100% NA NA NA NA NA boxplot RP11-89G4.1 NA chr5 132488382 132488702 + 321 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-89G4.1 NA 0.165 70-80% NA NA CRC,HCC,Normal,PAAD NA NA boxplot ST13P15 suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein) pseudogene 15 chr3 143517123 143518229 - 1107 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ST13P15 exo_circ_043753 0.988 0-10% NA NA CHD,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-158M2.4 NA chr15 85750336 85752901 - 2566 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-158M2.4 NA 0.024 90-100% NA NA Breast_cancer,HCC,PAAD NA NA boxplot RP5-864K19.4 NA chr1 38860000 38919396 + 59397 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-864K19.4 NA 0.482 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot LINCR-0001 uncharacterized LINCR-0001 chr8 10474565 10481974 + 7410 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINCR-0001 NA 0.129 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-15B17.2 NA chr4 99990737 99991477 - 741 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-15B17.2 NA 0.012 70-80% Testis 4.263955131 PAAD NA NA boxplot RP11-649E7.5 NA chr14 49620815 49623480 - 2666 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-649E7.5 NA 0.635 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot VEZF1P1 vascular endothelial zinc finger 1 pseudogene 1 chr3 193155456 193157208 - 1753 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=VEZF1P1 NA 0.224 80-90% Cervix 4.906892038 Breast_cancer,CHD,HCC,Normal,PAAD NA NA boxplot RP11-629O1.2 NA chr8 133573183 133573861 + 679 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-629O1.2 NA 0.153 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-203M5.2 NA chr14 20344233 20346888 - 2656 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-203M5.2 NA 0.024 20-30% Testis 3.725259283 CRC,HCC NA NA boxplot RP11-598F7.3 NA chr12 106524 111850 - 5327 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-598F7.3 NA 0.529 10-20% Lung 3.608134084 CRC,HCC,Normal,PAAD NA NA boxplot RARRES2P11 retinoic acid receptor responder (tazarotene induced) 2 pseudogene 11 chr20 29427400 29427883 - 484 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RARRES2P11 NA 0.012 90-100% NA NA CRC NA NA boxplot RP11-662J14.1 NA chr14 40386252 40386794 + 543 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-662J14.1 exo_circ_015390 0.2 20-30% Testis 4.124827547 CRC,HCC,Normal,PAAD NA NA boxplot RP11-619I22.1 NA chr17 59784813 59785035 + 223 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-619I22.1 NA 0.035 60-70% NA NA CRC,PAAD NA NA boxplot UPF3AP3 UPF3A pseudogene 3 chr9 99998301 99999069 - 769 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=UPF3AP3 NA 0.235 30-40% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot CH507-42P11.5 NA chr21 6060340 6076305 + 15966 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CH507-42P11.5 NA 0.047 70-80% NA NA HCC,PAAD NA NA boxplot RP11-138I1.4 NA chr17 16382152 16382669 - 518 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-138I1.4 NA 0.906 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot RP1-35C21.1 NA chr1 177351586 177366272 + 14687 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-35C21.1 NA 0.153 20-30% Spleen 3.486855861 Breast_cancer,CRC,HCC,Normal NA NA boxplot CASC21 cancer susceptibility candidate 21 (non-protein coding) chr8 127339274 127392631 + 53358 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CASC21 NA 0.2 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-398E10.1 NA chr14 44763157 44782829 - 19673 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-398E10.1 NA 0.024 40-50% Testis 1.0438502 HCC NA NA boxplot RP11-1008C21.2 NA chr15 38069481 38072959 - 3479 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1008C21.2 NA 0.224 70-80% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot AGGF1P1 angiogenic factor with G-patch and FHA domains 1 pseudogene 1 chr4 190041342 190043414 + 2073 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AGGF1P1 NA 0.447 40-50% Testis 1.062247163 CRC,HCC,Normal,PAAD NA NA boxplot RPL7P32 ribosomal protein L7 pseudogene 32 chr7 108510233 108510976 + 744 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL7P32 NA 0.882 20-30% NA NA CHD,CRC,HCC,Normal,PAAD CHD(up),HCC(up) NA boxplot CTSLP6 cathepsin L pseudogene 6 chr10 79870375 79873903 - 3529 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTSLP6 NA 0.012 0-10% Testis 4.480096459 HCC NA NA boxplot RANP8 RAN, member RAS oncogene family pseudogene 8 chr13 20747035 20748057 - 1023 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RANP8 NA 0.012 90-100% NA NA NA NA NA boxplot RP11-66B24.7 NA chr15 100849831 100865457 + 15627 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-66B24.7 NA 0.071 0-10% NA NA Breast_cancer,Normal,PAAD PAAD(up) NA boxplot RP4-764D2.1 NA chr1 236110061 236112370 + 2310 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-764D2.1 NA 0.012 30-40% NA NA PAAD NA NA boxplot HMGB3P16 high mobility group box 3 pseudogene 16 chr5 112452703 112452989 - 287 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HMGB3P16 NA 0.129 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-613C6.4 NA chr17 49795343 49795669 + 327 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-613C6.4 NA 0.129 50-60% Brain 4.906892038 CRC,HCC,Normal,PAAD NA NA boxplot ADAMTSL4-AS1 ADAMTSL4 antisense RNA 1 chr1 150560202 150574552 - 14351 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ADAMTSL4-AS1 NA 0.4 10-20% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(up),HCC(down),PAAD(down) NA boxplot RP11-686D22.3 NA chr17 35406948 35407818 - 871 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-686D22.3 NA 0.694 10-20% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(down) NA boxplot RP11-564C24.1 NA chr3 159721524 159722401 - 878 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-564C24.1 NA 0.106 70-80% NA NA CRC,Normal,PAAD NA NA boxplot SPATA31D5P SPATA31 subfamily D, member 5, pseudogene chr9 81913437 81919926 + 6490 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SPATA31D5P NA 0.012 0-10% Testis 4.902814689 Breast_cancer,Normal NA NA boxplot RP11-62C7.2 NA chr15 39019233 39024918 + 5686 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-62C7.2 exo_circ_036007,exo_circ_022876,exo_circ_011138 0.482 10-20% Testis 4.317861369 CRC,HCC,Normal,PAAD CHD(down) NA boxplot FBXW4P1 F-box and WD repeat domain containing 4 pseudogene 1 chr22 23262767 23265005 + 2239 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FBXW4P1 NA 0.235 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-522B15.3 NA chr15 96354237 96403803 + 49567 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-522B15.3 NA 0.118 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC126544.4 NA chr17 45633049 45636444 + 3396 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC126544.4 NA 0.082 50-60% NA NA HCC,Normal NA NA boxplot LINC00346 long intergenic non-protein coding RNA 346 chr13 110863987 110870251 - 6265 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00346 NA 0.871 0-10% Muscle 1.361216149 Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up),PAAD(up) NA boxplot RP11-722E23.2 NA chr8 33360839 33361415 - 577 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-722E23.2 NA 0.094 50-60% NA NA CRC,HCC,Normal NA NA boxplot MAFTRR MAF transcriptional regulator RNA chr16 79715232 79770563 - 55332 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MAFTRR NA 0.153 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CTB-55O6.13 NA chr19 14006422 14006773 + 352 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTB-55O6.13 NA 0.082 70-80% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CTA-246H3.12 NA chr22 25434324 25435070 - 747 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTA-246H3.12 NA 0.035 80-90% NA NA Breast_cancer,CRC,HCC NA NA boxplot RP5-1174N9.2 NA chr1 32973553 32974463 + 911 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-1174N9.2 NA 0.035 80-90% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-267J23.4 NA chr12 12111163 12111489 + 327 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-267J23.4 NA 0.894 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-180M15.6 NA chr12 12648939 12649713 + 775 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-180M15.6 NA 0.047 40-50% NA NA Breast_cancer,CRC,Normal,PAAD NA NA boxplot AP000688.14 NA chr21 36069642 36126640 - 56999 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AP000688.14 NA 0.388 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-800A3.7 NA chr11 73307235 73309361 - 2127 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-800A3.7 NA 0.118 50-60% NA NA Breast_cancer,HCC,Normal NA NA boxplot RP11-141O15.1 NA chr16 22286708 22288738 - 2031 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-141O15.1 NA 0.047 40-50% NA NA Normal NA NA boxplot LINC00619 long intergenic non-protein coding RNA 619 chr10 43845306 43850622 + 5317 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00619 NA 0.012 50-60% NA NA Breast_cancer,Normal NA NA boxplot RP11-49G2.3 NA chr12 22104491 22105320 - 830 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-49G2.3 NA 0.012 0-10% NA NA PAAD NA NA boxplot RP11-12A16.3 NA chr9 125567579 125573023 + 5445 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-12A16.3 NA 0.012 90-100% Fallopian Tube 3.806139337 HCC NA NA boxplot RP11-479G22.7 NA chr10 33035469 33035664 - 196 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-479G22.7 NA 0.012 80-90% NA NA CRC NA NA boxplot RP11-67H24.3 NA chr16 32781883 32784138 + 2256 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-67H24.3 NA 0.024 80-90% NA NA Breast_cancer,Normal NA NA boxplot RP1-118J21.25 NA chr1 39788976 39790171 + 1196 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-118J21.25 NA 0.047 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot C6orf3 NA chr6 111599875 111602295 + 2421 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=C6orf3 NA 0.682 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-304L19.12 NA chr16 2235689 2236913 - 1225 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-304L19.12 NA 0.024 70-80% NA NA Breast_cancer,PAAD NA NA boxplot RP11-156L14.1 NA chr17 62699244 62737922 + 38679 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-156L14.1 NA 0.094 50-60% Testis 3.201850186 CRC,HCC,Normal,PAAD NA NA boxplot RP11-572O6.1 NA chr3 48672455 48672733 + 279 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-572O6.1 NA 0.012 90-100% NA NA PAAD NA NA boxplot RP11-299J3.8 NA chr3 122416207 122443180 + 26974 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-299J3.8 NA 0.718 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot MAP2K4P1 mitogen-activated protein kinase kinase 4 pseudogene 1 chrX 73524275 73563085 - 38811 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MAP2K4P1 NA 0.541 40-50% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-174O3.1 NA chr3 120306726 120307952 + 1227 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-174O3.1 NA 0.012 90-100% Testis 2.062258204 Breast_cancer,HCC NA NA boxplot DPY19L2P1 DPY19L2 pseudogene 1 chr7 35079989 35186041 - 106053 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DPY19L2P1 NA 0.529 20-30% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up) NA boxplot RP11-297C4.6 NA chr16 30379763 30380110 - 348 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-297C4.6 NA 0.094 80-90% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CTA-384D8.31 NA chr22 50546415 50547652 + 1238 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTA-384D8.31 NA 0.024 90-100% Kidney 4.906892038 Normal,PAAD NA NA boxplot RP1-159M24.1 NA chr6 112616703 112617880 - 1178 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-159M24.1 NA 0.671 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-214K3.24 NA chr12 124085761 124088598 + 2838 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-214K3.24 NA 0.129 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP4-714D9.4 NA chr1 100099239 100099490 + 252 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-714D9.4 NA 0.012 50-60% Testis 4.906892038 Normal NA NA boxplot RP11-292E2.1 NA chr3 153357107 153374186 + 17080 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-292E2.1 NA 0.094 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CTB-95D12.1 NA chr5 155491336 155493598 + 2263 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTB-95D12.1 NA 0.012 50-60% Cervix 4.906892038 HCC NA NA boxplot RP1-172H20.4 NA chr20 45137706 45138976 - 1271 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-172H20.4 NA 0.012 40-50% NA NA Normal NA NA boxplot RP11-448A19.1 NA chr7 129604548 129611630 - 7083 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-448A19.1 NA 0.812 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot NDUFA5P9 NADH:ubiquinone oxidoreductase subunit A5 pseudogene 9 chr6 86214237 86214576 - 340 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NDUFA5P9 NA 0.012 20-30% NA NA CRC NA NA boxplot MRPS15P1 mitochondrial ribosomal protein S15 pseudogene 1 chr15 73483196 73483943 - 748 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MRPS15P1 NA 0.047 40-50% Muscle 4.906892038 Breast_cancer,CRC,HCC,Normal NA NA boxplot RP3-509I19.1 NA chr6 138822747 138823799 + 1053 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-509I19.1 NA 0.129 60-70% Pituitary 3.926783073 CRC,HCC,PAAD NA NA boxplot RP11-649A18.5 NA chr17 75138416 75141350 - 2935 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-649A18.5 NA 0.035 40-50% NA NA CRC,HCC,PAAD NA NA boxplot RP11-646J21.7 NA chr11 33787054 33787795 - 742 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-646J21.7 NA 0.082 40-50% Testis 4.76234717 CRC,HCC,Normal NA NA boxplot RPL39P26 ribosomal protein L39 pseudogene 26 chr11 13685499 13685656 - 158 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL39P26 NA 0.024 80-90% NA NA CRC,Normal NA NA boxplot PRDX1P1 peroxiredoxin 1 pseudogene 1 chr9 12972843 12973438 - 596 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PRDX1P1 NA 0.047 30-40% NA NA CRC,Normal,PAAD NA NA boxplot CTD-2196E14.3 NA chr16 23605841 23624107 + 18267 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2196E14.3 NA 0.035 40-50% NA NA CRC,Normal,PAAD NA NA boxplot CCDC13-AS1 CCDC13 antisense RNA 1 chr3 42732575 42746768 + 14194 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CCDC13-AS1 NA 0.024 30-40% NA NA HCC,Normal NA NA boxplot RP11-1041F24.1 NA chr12 91680131 91680873 + 743 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1041F24.1 NA 0.012 80-90% NA NA NA NA NA boxplot RP11-34P1.2 NA chr5 160258253 160258585 + 333 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-34P1.2 NA 0.659 70-80% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-462G12.2 NA chr16 3931217 3946305 - 15089 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-462G12.2 NA 0.012 90-100% NA NA Breast_cancer NA NA boxplot CTC-470E21.1 NA chr5 112363456 112363666 - 211 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-470E21.1 NA 0.024 20-30% NA NA PAAD NA NA boxplot SLAMF6P1 SLAM family member 6 pseudogene 1 chr1 162445549 162446566 + 1018 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SLAMF6P1 NA 0.035 70-80% Small Intestine 2.928768122 Breast_cancer,HCC NA NA boxplot HMGB3P10 high mobility group box 3 pseudogene 10 chr1 99698242 99699178 + 937 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HMGB3P10 NA 0.094 20-30% NA NA CHD,CRC,HCC,Normal NA NA boxplot RP11-561O23.8 NA chr9 68228651 68229312 + 662 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-561O23.8 NA 0.047 80-90% NA NA CRC,Normal,PAAD NA NA boxplot RP11-422P24.9 NA chr1 153995632 153995960 + 329 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-422P24.9 NA 0.024 70-80% Testis 3.590376781 CRC,Normal NA NA boxplot GPC6-AS1 GPC6 antisense RNA 1 chr13 94154193 94187991 - 33799 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GPC6-AS1 NA 0.012 90-100% Testis 4.906892038 Breast_cancer,HCC NA NA boxplot GS1-124K5.12 NA chr7 66554588 66576923 - 22336 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GS1-124K5.12 exo_circ_055473 0.918 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-47G4.2 NA chr18 71216704 71237102 - 20399 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-47G4.2 NA 0.012 60-70% Testis 4.906892038 Normal NA NA boxplot RP11-973N13.4 NA chr14 64514154 64540368 - 26215 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-973N13.4 NA 0.047 30-40% NA NA Normal,PAAD NA NA boxplot OR2L6P olfactory receptor family 2 subfamily L member 6 pseudogene chr1 248003129 248004068 + 940 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=OR2L6P NA 0.012 90-100% NA NA Breast_cancer,CRC,Normal NA NA boxplot RP11-93H12.4 NA chr10 85644073 85648066 + 3994 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-93H12.4 NA 0.024 50-60% Testis 3.622973338 Breast_cancer,PAAD NA NA boxplot NAP1L1P3 nucleosome assembly protein 1-like 1 pseudogene 3 chr3 120805866 120806745 + 880 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NAP1L1P3 NA 0.035 90-100% NA NA CRC,Normal NA NA boxplot PHBP2 prohibitin pseudogene 2 chr11 43733759 43734564 + 806 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PHBP2 NA 0.035 80-90% NA NA CRC,Normal,PAAD NA NA boxplot RP11-96B5.3 NA chr10 51062579 51068553 - 5975 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-96B5.3 NA 0.082 70-80% NA NA CRC,Normal,PAAD NA NA boxplot RP11-407B7.3 NA chr3 194070103 194080443 + 10341 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-407B7.3 NA 0.012 40-50% NA NA Breast_cancer,HCC NA NA boxplot RARRES2P2 retinoic acid receptor responder (tazarotene induced) 2 pseudogene 2 chr10 133637408 133637892 - 485 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RARRES2P2 NA 0.176 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-475O23.2 NA chr3 58572744 58574319 + 1576 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-475O23.2 NA 0.012 70-80% NA NA Breast_cancer,Normal NA NA boxplot LINC01260 long intergenic non-protein coding RNA 1260 chr20 44656451 44696096 - 39646 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01260 NA 0.4 30-40% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP4-673D20.6 NA chr20 1756756 1758940 - 2185 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-673D20.6 NA 0.059 50-60% Testis 3.775035756 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-461A8.1 NA chr16 3581181 3583266 + 2086 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-461A8.1 NA 0.165 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot AC005150.1 NA chr4 162740668 162742048 + 1381 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC005150.1 NA 0.012 60-70% Testis 4.699215834 Breast_cancer,HCC NA NA boxplot RP11-164H13.1 NA chr14 95711747 95757656 + 45910 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-164H13.1 NA 0.788 0-10% Spleen 3.480060904 Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down) NA boxplot RP11-434D9.1 NA chr5 67379378 67805238 + 425861 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-434D9.1 NA 0.012 70-80% Liver 2.344511767 Breast_cancer,Normal NA NA boxplot COX7CP1 cytochrome c oxidase subunit VIIc pseudogene 1 chr13 49187479 49187670 - 192 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=COX7CP1 NA 0.329 90-100% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-53B2.3 NA chr18 13514520 13522888 - 8369 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-53B2.3 NA 0.024 80-90% NA NA Breast_cancer,CRC,Normal NA NA boxplot CTC-487M23.6 NA chr5 112894933 112896531 + 1599 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-487M23.6 NA 0.259 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot AC018463.4 NA chr2 11308025 11308941 + 917 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC018463.4 NA 0.929 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-452L6.5 NA chr16 31456711 31459736 - 3026 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-452L6.5 NA 0.835 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),HCC(down) NA boxplot RP11-495P10.1 NA chr1 148402516 148432545 + 30030 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-495P10.1 NA 0.518 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down) NA boxplot RP1-170O19.22 NA chr7 27128969 27152561 - 23593 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-170O19.22 NA 0.706 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-301G21.1 NA chr1 233836080 233836432 - 353 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-301G21.1 NA 0.294 70-80% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-561C5.4 NA chr15 85205440 85234795 - 29356 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-561C5.4 NA 0.282 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP4-564F22.7 NA chr20 38418483 38419202 - 720 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-564F22.7 NA 0.082 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot LINC00525 long intergenic non-protein coding RNA 525 chr7 47761476 47766772 + 5297 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00525 NA 0.059 40-50% NA NA Breast_cancer,CRC,HCC,PAAD NA NA boxplot AC097721.2 NA chr2 138418284 138501698 - 83415 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC097721.2 NA 0.259 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot OSTN-AS1 OSTN antisense RNA 1 chr3 191213291 191234605 - 21315 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=OSTN-AS1 NA 0.282 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot VCAN-AS1 VCAN antisense RNA 1 chr5 83531352 83581320 - 49969 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=VCAN-AS1 NA 0.412 50-60% Testis 4.906892038 CRC,HCC,Normal,PAAD NA NA boxplot LINC01290 long intergenic non-protein coding RNA 1290 chr16 10514842 10528202 - 13361 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01290 NA 0.024 10-20% NA NA PAAD NA NA boxplot CTC-338M12.1 NA chr5 181205361 181206120 - 760 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-338M12.1 NA 0.024 70-80% NA NA Breast_cancer,CRC,Normal NA NA boxplot C10orf91 chromosome 10 open reading frame 91 chr10 132444327 132449408 + 5082 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=C10orf91 NA 0.165 60-70% NA NA Breast_cancer,CHD,CRC,HCC,Normal NA NA boxplot RP11-641D5.2 NA chr3 169447867 169477052 + 29186 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-641D5.2 NA 0.012 0-10% Esophagus 1.910782341 Breast_cancer,Normal NA NA boxplot CTD-2213F21.2 NA chr14 31420286 31452883 + 32598 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2213F21.2 NA 0.094 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot FRG1EP FSHD region gene 1 family member E, pseudogene chr20 29480147 29497179 - 17033 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FRG1EP NA 0.306 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot AC093901.1 NA chr2 118132128 118186386 - 54259 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC093901.1 NA 0.082 60-70% Testis 3.904452777 HCC,Normal NA NA boxplot AC007880.1 NA chr2 64846130 64863626 - 17497 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC007880.1 NA 0.224 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot FAM66D family with sequence similarity 66 member D chr8 12115782 12177550 + 61769 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FAM66D NA 0.224 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot KB-1183D5.13 NA chr22 21300990 21325042 - 24053 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KB-1183D5.13 NA 0.012 80-90% Testis 4.860100826 CRC NA NA boxplot RP11-996F15.4 NA chr12 29277397 29277882 - 486 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-996F15.4 NA 0.012 80-90% NA NA Normal NA NA boxplot AJ271736.10 NA chrY 57190738 57208756 + 18019 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AJ271736.10 NA 0.435 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-694I15.7 NA chr3 49140086 49160851 - 20766 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-694I15.7 NA 0.365 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-19E18.2 NA chr12 45789189 45789657 + 469 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-19E18.2 NA 0.024 90-100% NA NA CRC NA NA boxplot RP11-677I18.3 NA chr11 106085990 106101975 - 15986 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-677I18.3 NA 0.082 80-90% NA NA HCC,Normal NA NA boxplot RP11-973H7.3 NA chr18 12670426 12671145 - 720 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-973H7.3 NA 0.141 70-80% NA NA CRC,HCC,Normal,PAAD NA NA boxplot XXbac-BPG308J9.3 NA chr6 29223973 29290440 + 66468 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=XXbac-BPG308J9.3 NA 0.012 10-20% Testis 4.741298275 PAAD NA NA boxplot NFYC-AS1 NFYC antisense RNA 1 chr1 40690380 40692066 - 1687 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NFYC-AS1 NA 0.506 30-40% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RPL7P46 ribosomal protein L7 pseudogene 46 chr16 11027024 11027763 + 740 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL7P46 NA 0.294 70-80% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot AC138649.1 NA chr15 22714939 22715225 + 287 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC138649.1 NA 0.012 80-90% NA NA HCC NA NA boxplot RP11-521L9.1 NA chr16 68927547 68948261 - 20715 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-521L9.1 NA 0.212 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot NUDT4P1 nudix hydrolase 4 pseudogene 1 chr1 148748953 148749498 + 546 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NUDT4P1 NA 1 0-10% NA NA CHD,CRC,HCC,Normal,PAAD CHD(up),CRC(up),HCC(up),PAAD(up) NA boxplot GGT8P gamma-glutamyltransferase 8 pseudogene chr2 91775944 91781169 + 5226 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GGT8P NA 0.035 60-70% NA NA Breast_cancer,CRC,PAAD NA NA boxplot PHBP4 prohibitin pseudogene 4 chr2 154286589 154287425 + 837 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PHBP4 NA 0.012 80-90% NA NA Breast_cancer,PAAD NA NA boxplot CH17-333M13.1 NA chr1 143354191 143386122 + 31932 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CH17-333M13.1 NA 0.012 90-100% NA NA HCC NA NA boxplot RP11-20I23.7 NA chr16 2571570 2572353 - 784 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-20I23.7 NA 0.047 60-70% NA NA CRC,Normal,PAAD NA NA boxplot LINC00629 long intergenic non-protein coding RNA 629 chrX 134549973 134559923 + 9951 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00629 NA 0.224 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-484L8.1 NA chr18 48826051 48834770 - 8720 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-484L8.1 NA 0.306 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot TMEM75 transmembrane protein 75 chr8 127946559 127948723 - 2165 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TMEM75 NA 0.059 80-90% Testis 2.94858258 Breast_cancer,HCC,Normal,PAAD NA NA boxplot RP4-585I14.3 NA chr20 13368291 13368703 - 413 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-585I14.3 NA 0.024 80-90% NA NA CRC NA NA boxplot TRBV11-2 T cell receptor beta variable 11-2 chr7 142433895 142434394 + 500 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TRBV11-2 NA 0.388 30-40% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot CTD-2514C3.1 NA chr20 26018832 26020684 + 1853 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2514C3.1 NA 0.388 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-123J14.4 NA chr4 76886029 76886370 - 342 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-123J14.4 NA 0.012 90-100% Testis 4.518270568 NA NA NA boxplot LINC01436 long intergenic non-protein coding RNA 1436 chr21 36005338 36007838 + 2501 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01436 NA 0.012 10-20% NA NA Breast_cancer,HCC NA NA boxplot CHKB-AS1 CHKB antisense RNA 1 (head to head) chr22 50583026 50583877 + 852 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CHKB-AS1 NA 0.365 30-40% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot RHOQP1 ras homolog family member Q pseudogene 1 chr14 49599994 49600572 + 579 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RHOQP1 NA 0.506 50-60% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-875O11.1 NA chr8 22984596 23019335 - 34740 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-875O11.1 NA 0.859 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(down) NA boxplot A1BG-AS1 A1BG antisense RNA 1 chr19 58347751 58355183 + 7433 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=A1BG-AS1 NA 0.753 20-30% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot CTC-444N24.6 NA chr19 57267220 57280334 - 13115 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-444N24.6 NA 0.294 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-493P1.2 NA chr12 115961187 115962733 + 1547 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-493P1.2 NA 0.2 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-214O1.2 NA chr17 14303854 14305505 + 1652 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-214O1.2 NA 0.271 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CTD-2002J20.1 NA chr3 196474801 196475394 + 594 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2002J20.1 NA 0.082 90-100% NA NA HCC,Normal,PAAD NA NA boxplot AGAP13P ArfGAP with GTPase domain, ankyrin repeat and PH domain 13, pseudogene chr10 46816516 46832476 + 15961 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AGAP13P NA 0.576 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot AC017074.2 NA chr2 113677702 113704078 - 26377 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC017074.2 NA 0.271 10-20% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP5-908D6.1 NA chr1 89324522 89334880 + 10359 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-908D6.1 NA 0.059 50-60% Spleen 4.906892038 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC090286.4 NA chr17 18951625 18954149 - 2525 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC090286.4 NA 0.012 80-90% NA NA Breast_cancer NA NA boxplot AC006116.15 NA chr19 56347081 56348183 - 1103 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC006116.15 NA 0.024 30-40% Testis 2.299299996 HCC,Normal NA NA boxplot RP11-704J17.5 NA chr6 133540784 133541174 + 391 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-704J17.5 NA 0.012 90-100% NA NA NA NA NA boxplot RP11-116N8.1 NA chr14 35897982 36063743 + 165762 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-116N8.1 NA 0.012 70-80% Brain 3.954298156 Normal NA NA boxplot RP4-697K14.15 NA chr20 63543411 63543738 + 328 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-697K14.15 NA 0.012 60-70% NA NA Normal NA NA boxplot DHRSX-IT1 DHRSX intronic transcript 1 chrY 2334295 2336410 - 2116 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DHRSX-IT1 NA 0.035 70-80% NA NA CRC,HCC NA NA boxplot USP32P1 ubiquitin specific peptidase 32 pseudogene 1 chr17 16786489 16804455 + 17967 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=USP32P1 NA 0.035 10-20% NA NA HCC,Normal,PAAD NA NA boxplot RP11-370I10.11 NA chr12 48360920 48361377 + 458 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-370I10.11 NA 0.012 90-100% NA NA NA NA NA boxplot EIF4A1P1 eukaryotic translation initiation factor 4A1 pseudogene 1 chr21 27367014 27367947 - 934 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=EIF4A1P1 NA 0.012 30-40% Spleen 4.906892038 CRC NA NA boxplot RP11-655M14.13 NA chr11 67618279 67627304 - 9026 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-655M14.13 NA 0.012 70-80% NA NA Breast_cancer,CRC,Normal NA NA boxplot CTC-344H19.4 NA chr19 46027654 46030161 + 2508 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-344H19.4 NA 0.024 20-30% NA NA Breast_cancer,CRC NA NA boxplot NPY6R neuropeptide Y receptor Y6 (pseudogene) chr5 137801193 137810751 + 9559 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NPY6R NA 0.2 20-30% Heart 2.761942813 Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot SNX18P8 sorting nexin 18 pseudogene 8 chr9 40293082 40293955 + 874 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SNX18P8 NA 0.024 60-70% Testis 3.260464514 Normal,PAAD NA NA boxplot KRT8P39 keratin 8 pseudogene 39 chr12 68705634 68707066 + 1433 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KRT8P39 exo_circ_017846 0.165 20-30% NA NA Breast_cancer,CRC,Normal,PAAD NA NA boxplot CYP4F29P cytochrome P450 family 4 subfamily F member 29, pseudogene chr21 13843133 13848364 - 5232 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CYP4F29P NA 0.518 20-30% Esophagus 1.107321993 Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot CH17-431G21.1 NA chr17 38195740 38257152 - 61413 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CH17-431G21.1 NA 0.929 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(up),HCC(up),PAAD(up) NA boxplot NDUFA5P10 NADH:ubiquinone oxidoreductase subunit A5 pseudogene 10 chr1 109810642 109810998 - 357 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NDUFA5P10 NA 0.012 10-20% Stomach 3.801650709 HCC,Normal,PAAD NA NA boxplot WDFY3-AS2 WDFY3 antisense RNA 2 chr4 84965682 85011277 + 45596 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=WDFY3-AS2 NA 0.671 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RPL34P22 ribosomal protein L34 pseudogene 22 chr11 44629357 44629674 + 318 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL34P22 NA 0.024 30-40% NA NA Breast_cancer,CRC,Normal NA NA boxplot XXbac-BPG299F13.14 NA chr6 31200165 31201918 - 1754 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=XXbac-BPG299F13.14 NA 0.012 60-70% NA NA Normal NA NA boxplot GCSHP4 glycine cleavage system protein H (aminomethyl carrier) pseudogene 4 chr12 8141168 8142697 - 1530 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GCSHP4 NA 0.012 90-100% Whole Blood 4.906892038 CRC NA NA boxplot RP13-644M16.5 NA chr4 69066395 69069888 + 3494 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP13-644M16.5 NA 0.024 70-80% Kidney 3.774451174 PAAD NA NA boxplot RP11-624G17.3 NA chr11 57476493 57477534 - 1042 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-624G17.3 NA 0.035 80-90% NA NA Normal,PAAD NA NA boxplot RP11-70L8.5 NA chr9 21892188 21893857 + 1670 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-70L8.5 exo_circ_044926 0.247 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-255B23.1 NA chr8 127086263 127087510 - 1248 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-255B23.1 NA 0.906 10-20% NA NA CRC,HCC,Normal,PAAD CHD(down),HCC(up),PAAD(up) NA boxplot RP11-63A1.4 NA chr17 46939155 46939860 - 706 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-63A1.4 NA 0.294 10-20% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot RP11-338N10.3 NA chr1 7700704 7700970 - 267 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-338N10.3 NA 0.035 20-30% NA NA HCC NA NA boxplot RP11-1223D19.2 NA chr2 110279606 110285681 + 6076 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1223D19.2 NA 0.188 90-100% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-420A23.1 NA chr4 128292751 128519394 + 226644 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-420A23.1 exo_circ_021881 0.741 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot OR7A15P olfactory receptor family 7 subfamily A member 15 pseudogene chr19 14927058 14928024 + 967 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=OR7A15P NA 0.071 20-30% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot RP11-717H13.1 NA chr4 171289475 171298267 - 8793 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-717H13.1 NA 0.012 90-100% Testis 4.584367549 Breast_cancer NA NA boxplot RP11-235E17.5 NA chr17 3619256 3619913 - 658 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-235E17.5 NA 0.035 40-50% NA NA CRC,Normal,PAAD NA NA boxplot RP11-653B10.1 NA chr8 82514568 82677153 - 162586 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-653B10.1 NA 0.012 30-40% Brain 4.906892038 NA NA NA boxplot RP11-231G3.1 NA chr5 60866457 60866935 - 479 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-231G3.1 NA 0.2 70-80% NA NA CRC,HCC,Normal,PAAD NA NA boxplot AC027612.6 NA chr2 91617160 91659972 - 42813 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC027612.6 NA 0.518 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CTC-312O10.3 NA chr19 6894994 6896832 - 1839 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-312O10.3 NA 0.165 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CTC-325J23.2 NA chr5 80630313 80631590 - 1278 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-325J23.2 NA 0.024 20-30% NA NA Breast_cancer,CRC NA NA boxplot RP11-294C11.6 NA chr15 21703428 21705627 - 2200 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-294C11.6 NA 0.024 40-50% NA NA CRC,PAAD NA NA boxplot RP11-715J22.4 NA chr16 2456252 2459979 - 3728 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-715J22.4 NA 0.118 70-80% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CTA-313A17.2 NA chr7 102327256 102329530 - 2275 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTA-313A17.2 NA 0.071 60-70% NA NA CRC,Normal,PAAD NA NA boxplot RP11-341G5.2 NA chr4 13977166 13978028 + 863 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-341G5.2 NA 0.035 60-70% Testis 4.193066434 HCC,Normal NA NA boxplot RP11-64K12.1 NA chr15 40480752 40481315 - 564 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-64K12.1 NA 0.012 90-100% NA NA CRC NA NA boxplot DCTN1-AS1 DCTN1 antisense RNA 1 chr2 74385486 74393882 + 8397 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DCTN1-AS1 NA 0.129 40-50% Brain 2.436673645 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-404O13.5 NA chr1 158197922 158203877 - 5956 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-404O13.5 NA 0.247 30-40% Testis 3.385702239 CRC,HCC,Normal,PAAD NA NA boxplot RP11-343H5.4 NA chr1 206695837 206696269 - 433 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-343H5.4 NA 0.376 80-90% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP3-395M20.12 NA chr1 2546465 2547460 + 996 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-395M20.12 NA 0.835 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CRC(up),PAAD(up) NA boxplot HIST3H2BA histone cluster 3, H2ba (pseudogene) chr1 228464103 228464626 - 524 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HIST3H2BA NA 0.341 20-30% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot SEPT14P4 NA chr4 118640673 118640858 + 186 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SEPT14P4 NA 0.141 30-40% NA NA HCC,Normal,PAAD NA NA boxplot HSPA8P1 heat shock protein family A (Hsp70) member 8 pseudogene 1 chrX 121203182 121205014 - 1833 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HSPA8P1 NA 0.059 90-100% NA NA Breast_cancer,Normal NA NA boxplot CTD-2024P10.2 NA chr5 34651457 34651888 - 432 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2024P10.2 NA 0.035 0-10% Spleen 1.569014091 HCC,PAAD NA NA boxplot CYYR1-AS1 cysteine/tyrosine-rich 1 antisense RNA 1 chr21 26393635 26569252 + 175618 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CYYR1-AS1 NA 0.176 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-364B6.2 NA chr1 104072983 104226678 + 153696 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-364B6.2 NA 0.035 60-70% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot RP11-867G23.4 NA chr11 66276779 66277492 - 714 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-867G23.4 NA 0.929 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),HCC(up) NA boxplot RP11-1084A12.2 NA chr15 34255286 34257832 + 2547 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1084A12.2 NA 0.024 50-60% Testis 4.906892038 CRC,Normal NA NA boxplot PSMD6-AS2 PSMD6 antisense RNA 2 chr3 64004022 64012148 + 8127 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PSMD6-AS2 NA 0.435 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CRC(up) NA boxplot RP11-417E7.2 NA chr6 169175304 169182740 - 7437 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-417E7.2 NA 0.012 60-70% NA NA Breast_cancer,HCC NA NA boxplot RP11-36C20.1 NA chr5 33162179 33162807 + 629 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-36C20.1 NA 0.929 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),PAAD(down) NA boxplot ROR1-AS1 ROR1 antisense RNA 1 chr1 64094442 64171297 - 76856 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ROR1-AS1 NA 0.035 80-90% NA NA Breast_cancer,CRC,PAAD NA NA boxplot RP1-278D1.2 NA chrX 117894632 117895683 - 1052 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-278D1.2 NA 0.035 80-90% NA NA CRC,Normal NA NA boxplot RP11-298E9.5 NA chr10 3223816 3227407 + 3592 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-298E9.5 NA 0.165 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC079742.4 NA chr7 6578565 6588974 - 10410 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC079742.4 NA 0.247 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot KB-1460A1.1 NA chr8 101122145 101126158 - 4014 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KB-1460A1.1 NA 0.424 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-491F9.6 NA chr16 49336683 49337345 + 663 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-491F9.6 NA 0.012 30-40% Brain 4.614401258 Normal NA NA boxplot ANTXRLP1 anthrax toxin receptor-like pseudogene 1 chr10 46233885 46273557 - 39673 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ANTXRLP1 NA 0.6 10-20% Testis 3.50219198 Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down),HCC(down),PAAD(down) NA boxplot RP11-197N18.2 NA chr12 122975320 122982907 + 7588 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-197N18.2 NA 0.929 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot LINC01389 long intergenic non-protein coding RNA 1389 chr1 47380928 47408477 - 27550 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01389 NA 0.435 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP3-359N14.2 NA chr6 105612667 105632196 - 19530 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-359N14.2 NA 0.012 80-90% Testis 4.651922075 Breast_cancer,HCC NA NA boxplot RP11-295I5.4 NA chr12 25225103 25225665 + 563 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-295I5.4 NA 0.012 80-90% NA NA CRC,HCC NA NA boxplot LLNLR-307A6.1 NA chr19 1386804 1389651 - 2848 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LLNLR-307A6.1 NA 0.071 80-90% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-12D24.6 NA chr9 5356312 5356525 - 214 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-12D24.6 NA 0.035 50-60% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot RP11-440I14.3 NA chr4 174536640 174540784 + 4145 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-440I14.3 NA 0.012 10-20% NA NA Breast_cancer,Normal NA NA boxplot RP11-702F3.3 NA chr11 46123573 46177106 + 53534 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-702F3.3 NA 0.024 70-80% Testis 4.906892038 Breast_cancer,CRC,PAAD NA NA boxplot OR2A1-AS1 OR2A1 antisense RNA 1 chr7 144251264 144356181 - 104918 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=OR2A1-AS1 NA 0.976 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up),CRC(up),HCC(up),PAAD(up) NA boxplot RP11-162A12.2 NA chr18 76794732 76822295 - 27564 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-162A12.2 NA 0.894 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-178C3.6 NA chr17 60063004 60064782 - 1779 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-178C3.6 NA 0.035 50-60% NA NA Breast_cancer,Normal,PAAD NA NA boxplot LINC01506 long intergenic non-protein coding RNA 1506 chr9 68543541 68546589 - 3049 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01506 NA 0.812 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up) NA boxplot RP11-1028N23.2 NA chr12 115576676 115577615 + 940 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1028N23.2 NA 0.024 80-90% Testis 4.906892038 Normal NA NA boxplot RP11-328C8.4 NA chr12 42459366 42466128 + 6763 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-328C8.4 NA 0.365 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot AC097662.2 NA chr2 227221052 227325201 - 104150 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC097662.2 NA 0.259 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-286H14.8 NA chr7 129209775 129213545 - 3771 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-286H14.8 NA 0.024 50-60% NA NA Breast_cancer,HCC NA NA boxplot RIMKLBP2 ribosomal modification protein rimK-like family member B pseudogene 2 chr1 219199914 219200567 - 654 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RIMKLBP2 NA 0.047 30-40% NA NA HCC,Normal NA NA boxplot CASC15 cancer susceptibility candidate 15 (non-protein coding) chr6 21664772 22368328 + 703557 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CASC15 exo_circ_033446,exo_circ_004144,exo_circ_055179,exo_circ_044452,exo_circ_044451,exo_circ_049790,exo_circ_039031,exo_circ_008079,exo_circ_004142,exo_circ_037160,exo_circ_004143,exo_circ_018449 0.929 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down) NA boxplot CENPBD1P1 CENPB DNA-binding domains containing 1 pseudogene 1 chr19 58573503 58599801 + 26299 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CENPBD1P1 NA 0.988 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up),CRC(up),HCC(up),PAAD(up) NA boxplot RP11-362K14.5 NA chr3 169777192 169780334 - 3143 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-362K14.5 NA 0.282 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot RP11-727F15.9 NA chr11 62832234 62834043 + 1810 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-727F15.9 NA 0.259 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CTA-407F11.7 NA chr22 25580241 25581382 - 1142 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTA-407F11.7 NA 0.012 80-90% NA NA Normal NA NA boxplot RP11-204C16.4 NA chrX 41675760 41676494 - 735 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-204C16.4 NA 0.929 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(up) NA boxplot RP11-70J12.1 NA chr9 4070906 4071884 - 979 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-70J12.1 NA 0.012 80-90% Testis 3.951396501 NA NA NA boxplot RP11-66N24.3 NA chr14 23561097 23568073 + 6977 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-66N24.3 NA 0.529 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-261B23.2 NA chr15 30282533 30288389 + 5857 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-261B23.2 NA 0.012 30-40% NA NA NA NA NA boxplot MTHFD1P1 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 pseudogene 1 chrX 57392646 57395409 - 2764 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MTHFD1P1 NA 0.153 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot PLCB2-AS1 PLCB2 antisense RNA 1 chr15 40300670 40301820 + 1151 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PLCB2-AS1 NA 0.012 10-20% NA NA Normal NA NA boxplot AC093642.4 NA chr2 242025183 242026176 - 994 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC093642.4 NA 0.188 60-70% Testis 4.544172602 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AL078471.5 NA chr21 10482738 10605716 + 122979 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AL078471.5 NA 0.506 70-80% NA NA CRC,HCC,Normal,PAAD NA NA boxplot UQCRFS1P1 ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1 pseudogene 1 chr22 39875289 39876108 + 820 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=UQCRFS1P1 NA 0.976 20-30% NA NA CHD,CRC,HCC,Normal,PAAD CHD(up) NA boxplot HCG4P3 HLA complex group 4 pseudogene 3 chr6 30006121 30007116 - 996 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HCG4P3 NA 0.129 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RPL23AP60 ribosomal protein L23a pseudogene 60 chr10 133778246 133778699 + 454 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL23AP60 NA 0.094 80-90% Testis 4.906892038 HCC NA NA boxplot RP4-756H11.5 NA chr7 66553805 66554199 - 395 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-756H11.5 NA 0.929 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down) NA boxplot RNF185-AS1 RNF185 antisense RNA 1 chr22 31205264 31205616 - 353 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RNF185-AS1 NA 0.235 10-20% NA NA CRC,HCC,Normal,PAAD NA NA boxplot OR7E38P olfactory receptor family 7 subfamily E member 38 pseudogene chr7 97966090 97967074 - 985 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=OR7E38P NA 0.8 10-20% NA NA CRC,HCC,Normal,PAAD CHD(down),PAAD(up) NA boxplot CTD-2529O21.1 NA chr17 79991944 79992841 - 898 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2529O21.1 NA 0.035 70-80% Testis 3.29136954 Breast_cancer,HCC,Normal,PAAD NA NA boxplot RP11-991C1.2 NA chr14 95048220 95050953 + 2734 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-991C1.2 NA 0.012 0-10% Testis 4.906892038 Breast_cancer,PAAD NA NA boxplot RP11-294J22.6 NA chr17 50693448 50695449 + 2002 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-294J22.6 NA 0.588 20-30% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot RP11-760D2.5 NA chr7 56534230 56538130 - 3901 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-760D2.5 NA 0.012 70-80% Testis 4.116471318 Breast_cancer,HCC NA NA boxplot CTD-2066L21.3 NA chr5 32925639 33297910 - 372272 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2066L21.3 NA 0.012 80-90% Testis 3.734056342 Breast_cancer,Normal NA NA boxplot RP11-617D20.2 NA chr4 38618265 38619437 - 1173 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-617D20.2 NA 0.024 90-100% Ovary 4.201051133 Breast_cancer,Normal,PAAD NA NA boxplot RP11-278A23.2 NA chr16 87739771 87747706 - 7936 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-278A23.2 NA 0.118 40-50% Testis 2.079426819 Breast_cancer,CRC,Normal,PAAD NA NA boxplot RP11-260E18.1 NA chr5 16615926 16629969 + 14044 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-260E18.1 NA 0.129 50-60% Testis 1.895951238 Breast_cancer,HCC,Normal NA NA boxplot ACTBP7 actin, beta pseudogene 7 chr15 43989061 43990184 - 1124 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ACTBP7 NA 0.012 80-90% Testis 3.110561387 Breast_cancer NA NA boxplot RP11-830F9.5 NA chr16 88881038 88887136 + 6099 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-830F9.5 NA 0.306 70-80% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-565A3.2 NA chr4 187532878 187672641 - 139764 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-565A3.2 NA 0.012 30-40% Testis 4.906892038 NA NA NA boxplot RP11-379K17.4 NA chr3 169939353 169966734 - 27382 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-379K17.4 NA 0.424 30-40% Testis 3.047475373 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CTD-2552B11.3 NA chr14 21184341 21184959 - 619 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2552B11.3 NA 0.024 60-70% NA NA HCC NA NA boxplot FNBP1P1 formin binding protein 1 pseudogene 1 chr2 74120680 74123218 + 2539 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FNBP1P1 NA 0.694 10-20% NA NA CHD,CRC,HCC,Normal,PAAD CHD(down),CRC(up),PAAD(down) NA boxplot RP11-58K22.5 NA chr11 44604508 44605337 - 830 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-58K22.5 NA 0.094 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-36I17.2 NA chr16 53628256 53628816 - 561 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-36I17.2 NA 0.035 20-30% NA NA PAAD NA NA boxplot RP1-281H8.3 NA chr6 149491567 149492289 - 723 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-281H8.3 NA 0.141 90-100% Testis 3.188526569 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RPS3AP54 ribosomal protein S3a pseudogene 54 chr9 6662424 6663792 + 1369 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPS3AP54 NA 0.035 80-90% NA NA PAAD NA NA boxplot RP11-963H4.6 NA chr17 10821901 10822243 - 343 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-963H4.6 NA 0.012 50-60% NA NA Breast_cancer,HCC NA NA boxplot RP3-335E1.1 NA chr6 106451496 106457248 - 5753 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-335E1.1 exo_circ_022070 0.012 80-90% NA NA HCC NA NA boxplot RP11-677M14.5 NA chr11 124807822 124808269 - 448 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-677M14.5 NA 0.035 10-20% NA NA Breast_cancer,Normal NA NA boxplot SNX25P1 sorting nexin 25 pseudogene 1 chr1 211417025 211417934 + 910 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SNX25P1 NA 0.106 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-372E1.1 NA chr3 142827096 142827728 - 633 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-372E1.1 NA 0.012 60-70% NA NA Breast_cancer NA NA boxplot RP11-37B2.1 NA chr8 89609409 89757727 - 148319 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-37B2.1 exo_circ_025868,exo_circ_023564,exo_circ_026582,exo_circ_022326 0.918 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RPL4P2 ribosomal protein L4 pseudogene 2 chr1 166747379 166748660 + 1282 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL4P2 NA 0.012 80-90% NA NA HCC NA NA boxplot VN1R51P vomeronasal 1 receptor 51 pseudogene chr9 97093694 97094638 - 945 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=VN1R51P NA 0.012 40-50% Testis 2.013007257 NA NA NA boxplot RP11-601H16.1 NA chr2 78437850 78438921 + 1072 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-601H16.1 NA 0.012 80-90% NA NA NA NA NA boxplot RP11-120I21.2 NA chr8 83912713 84140283 + 227571 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-120I21.2 NA 0.035 50-60% Testis 4.906892038 Normal,PAAD NA NA boxplot AC007566.10 NA chr7 92457564 92491610 + 34047 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC007566.10 NA 0.871 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(down) NA boxplot STARD13-AS STARD13 antisense RNA chr13 33180401 33281584 + 101184 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=STARD13-AS NA 0.012 90-100% Testis 2.962462404 HCC,PAAD NA NA boxplot ERI3-IT1 ERI3 intronic transcript 1 chr1 44243408 44244273 - 866 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ERI3-IT1 NA 0.082 70-80% Testis 1.023742108 Breast_cancer,CRC,PAAD NA NA boxplot OR5AK3P olfactory receptor family 5 subfamily AK member 3 pseudogene chr11 56970850 56972146 + 1297 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=OR5AK3P NA 0.024 50-60% Spleen 4.906892038 Normal NA NA boxplot RP11-101E13.5 NA chr1 193090866 193091556 - 691 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-101E13.5 NA 0.494 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot LIPE-AS1 LIPE antisense RNA 1 chr19 42397128 42652355 + 255228 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LIPE-AS1 NA 0.871 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot AC025918.2 NA chr15 58889967 58894082 + 4116 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC025918.2 NA 0.012 70-80% NA NA HCC NA NA boxplot RP11-504I13.2 NA chr18 76385642 76389406 - 3765 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-504I13.2 NA 0.106 50-60% NA NA Breast_cancer,CRC,Normal,PAAD NA NA boxplot RP11-19N8.2 NA chr16 32951993 33028037 - 76045 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-19N8.2 NA 0.012 90-100% Testis 4.906892038 Breast_cancer,PAAD NA NA boxplot RP11-138E2.1 NA chr9 130044713 130045081 + 369 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-138E2.1 NA 0.118 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-50C13.1 NA chr15 58587507 58591676 + 4170 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-50C13.1 NA 0.012 30-40% NA NA Breast_cancer,CRC NA NA boxplot RP11-395C3.1 NA chr5 126628019 126628319 - 301 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-395C3.1 NA 0.012 10-20% NA NA Normal NA NA boxplot RP11-34A14.3 NA chr10 98252023 98256575 + 4553 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-34A14.3 exo_circ_025019,exo_circ_010731 0.094 70-80% NA NA CRC,Normal,PAAD NA NA boxplot RPL23AP75 ribosomal protein L23a pseudogene 75 chr17 40439467 40439917 - 451 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL23AP75 NA 0.012 80-90% NA NA NA NA NA boxplot RP11-641C17.3 NA chr3 60730055 60730644 - 590 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-641C17.3 NA 0.024 40-50% NA NA CRC,PAAD NA NA boxplot PDZPH1P NA chr5 103430406 103526618 - 96213 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PDZPH1P NA 0.012 90-100% NA NA Normal NA NA boxplot CTD-2331C18.5 NA chr11 61227168 61248533 + 21366 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2331C18.5 NA 0.035 90-100% NA NA HCC,PAAD NA NA boxplot AC104820.2 NA chr2 181101932 181399559 + 297628 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC104820.2 exo_circ_043428,exo_circ_009682,exo_circ_048568 0.894 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot RP11-349I1.2 NA chr14 94430633 94464730 + 34098 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-349I1.2 NA 0.024 60-70% Skin 4.906892038 CRC NA NA boxplot MRPL23-AS1 MRPL23 antisense RNA 1 chr11 1983237 1989920 - 6684 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MRPL23-AS1 NA 0.012 90-100% NA NA Breast_cancer,CRC NA NA boxplot RP11-521O16.1 NA chr2 127024252 127025723 - 1472 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-521O16.1 NA 0.012 90-100% NA NA NA NA NA boxplot ZNF213-AS1 ZNF213 antisense RNA 1 (head to head) chr16 3110460 3134882 - 24423 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ZNF213-AS1 NA 0.847 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down) NA boxplot EEF1A1P10 eukaryotic translation elongation factor 1 alpha 1 pseudogene 10 chr7 144647186 144648575 - 1390 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=EEF1A1P10 NA 0.259 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC012370.2 NA chr2 65373700 65380685 - 6986 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC012370.2 exo_circ_015898 0.094 30-40% Testis 4.906892038 CRC,HCC,Normal,PAAD NA NA boxplot LINC01376 long intergenic non-protein coding RNA 1376 chr2 18986451 19346748 - 360298 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01376 NA 0.2 40-50% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-311P8.2 NA chrX 75326772 75327999 - 1228 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-311P8.2 NA 0.541 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-4B16.4 NA chr18 77112602 77115726 + 3125 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-4B16.4 NA 0.235 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-475C16.1 NA chr6 153282287 153282733 - 447 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-475C16.1 NA 0.929 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-468N14.13 NA chr4 68901008 68906983 - 5976 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-468N14.13 NA 0.012 90-100% NA NA Breast_cancer NA NA boxplot CTC-270D5.1 NA chr5 141046260 141096402 - 50143 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-270D5.1 NA 0.024 90-100% NA NA HCC NA NA boxplot RP11-812I20.2 NA chr6 47562622 47563018 + 397 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-812I20.2 exo_circ_049838 0.047 10-20% Testis 4.906892038 CRC,PAAD NA NA boxplot SORD2P sorbitol dehydrogenase 2, pseudogene chr15 44825747 44884694 - 58948 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SORD2P NA 0.624 20-30% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP6-109B7.5 NA chr22 46053093 46053560 + 468 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP6-109B7.5 NA 0.012 30-40% NA NA Normal NA NA boxplot RP11-161M6.3 NA chr16 991151 1000926 - 9776 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-161M6.3 NA 0.271 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-932O9.7 NA chr15 30616998 30625773 - 8776 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-932O9.7 NA 0.494 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CTD-2296D1.3 NA chr5 7362979 7364531 - 1553 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2296D1.3 NA 0.012 80-90% Testis 4.906892038 PAAD NA NA boxplot SCARNA9 small Cajal body-specific RNA 9 chr11 93721513 93721865 + 353 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SCARNA9 NA 0.2 20-30% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-166B2.5 NA chr16 11908208 11908916 + 709 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-166B2.5 NA 0.012 50-60% NA NA Normal NA NA boxplot RPL7P14 ribosomal protein L7 pseudogene 14 chr2 203040108 203040899 + 792 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL7P14 NA 0.071 60-70% NA NA CRC,Normal NA NA boxplot RPL7P60 ribosomal protein L7 pseudogene 60 chr7 100139629 100140682 - 1054 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL7P60 NA 0.012 70-80% NA NA NA NA NA boxplot RP11-452K12.7 NA chr10 97401115 97419524 + 18410 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-452K12.7 NA 0.047 70-80% NA NA Breast_cancer,Normal NA NA boxplot RP11-545M8.4 NA chr13 26965967 26991996 - 26030 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-545M8.4 NA 0.012 90-100% NA NA Breast_cancer,Normal NA NA boxplot RP11-727A23.7 NA chr11 83209431 83213379 - 3949 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-727A23.7 NA 0.012 50-60% NA NA HCC NA NA boxplot EFCAB14P1 EF-hand calcium binding domain 14 pseudogene 1 chr1 35122022 35122484 + 463 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=EFCAB14P1 NA 0.012 60-70% NA NA Normal NA NA boxplot CTC-350I8.1 NA chr5 132963770 132964164 + 395 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-350I8.1 NA 0.012 90-100% Testis 1.469700063 CRC NA NA boxplot RP11-359H3.4 NA chr3 120484171 120484527 - 357 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-359H3.4 NA 0.012 70-80% NA NA NA NA NA boxplot SNHG12 small nucleolar RNA host gene 12 chr1 28578538 28582983 - 4446 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SNHG12 exo_circ_048315 0.953 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD PAAD(up) NA boxplot RP5-1184F4.7 NA chr20 32509959 32520285 + 10327 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-1184F4.7 NA 0.271 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot LL0XNC01-237H1.3 NA chrX 102937770 102940561 - 2792 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LL0XNC01-237H1.3 NA 0.012 70-80% NA NA CRC NA NA boxplot AC073130.1 NA chr7 116275606 116286734 - 11129 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC073130.1 NA 0.094 20-30% Testis 4.015818743 CRC,HCC,Normal,PAAD NA NA boxplot SLC9A7P1 solute carrier family 9, subfamily A (NHE7, cation proton antiporter 7), member 7 pseudogene 1 chr12 98453835 98457145 - 3311 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SLC9A7P1 NA 0.753 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down) NA boxplot OSGEPL1-AS1 OSGEPL1 antisense RNA 1 chr2 189762704 189765556 + 2853 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=OSGEPL1-AS1 NA 0.129 50-60% NA NA HCC,Normal,PAAD NA NA boxplot AK3P3 adenylate kinase 3 pseudogene 3 chr7 23129178 23129841 + 664 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AK3P3 NA 0.176 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AP000662.4 NA chr11 57638024 57652790 + 14767 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AP000662.4 NA 0.141 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RPS3P1 ribosomal protein S3 pseudogene 1 chr20 14003508 14003699 + 192 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPS3P1 NA 0.012 50-60% NA NA NA NA NA boxplot RP11-54O7.11 NA chr1 1011997 1013193 - 1197 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-54O7.11 NA 0.012 0-10% NA NA Normal NA NA boxplot HIST2H2BC histone cluster 2, H2bc (pseudogene) chr1 149850193 149850772 - 580 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HIST2H2BC NA 0.682 40-50% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot STRADBP1 STE20-related kinase adaptor beta pseudogene 1 chr7 150512559 150513839 - 1281 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=STRADBP1 NA 0.176 90-100% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-202I11.2 NA chr9 85756042 85765112 - 9071 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-202I11.2 NA 0.012 0-10% Testis 4.906892038 Normal NA NA boxplot RP13-465B17.4 NA chrY 386980 405579 + 18600 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP13-465B17.4 NA 0.071 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot AC074286.1 NA chr2 177283508 177392691 - 109184 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC074286.1 NA 0.718 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RSL24D1P2 ribosomal L24 domain containing 1 pseudogene 2 chr2 62561058 62561423 - 366 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RSL24D1P2 NA 0.012 90-100% Ovary 4.906892038 HCC,Normal NA NA boxplot RP11-507J18.5 NA chr15 50742702 50743276 - 575 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-507J18.5 NA 0.059 50-60% NA NA CRC,Normal NA NA boxplot RP11-1149O23.2 NA chr8 23189279 23190675 + 1397 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1149O23.2 NA 0.035 60-70% NA NA Normal,PAAD NA NA boxplot CTC-303L1.1 NA chr5 94592771 94594791 + 2021 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-303L1.1 NA 0.082 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP5-978I12.1 NA chr7 25358240 25359908 - 1669 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-978I12.1 NA 0.012 90-100% Fallopian Tube 3.745974454 CRC NA NA boxplot PGBD4P1 NA chr7 142722358 142722764 + 407 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PGBD4P1 NA 0.718 0-10% Testis 3.897316908 Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot LA16c-360H6.1 NA chr16 3292879 3293403 + 525 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LA16c-360H6.1 NA 0.047 20-30% NA NA Breast_cancer,CRC,Normal,PAAD NA NA boxplot RP11-592N21.2 NA chr15 71342324 71348471 + 6148 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-592N21.2 exo_circ_002917 0.059 20-30% Testis 3.322928181 HCC,Normal,PAAD NA NA boxplot RP11-141M1.1 NA chr13 33333679 33335277 - 1599 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-141M1.1 NA 0.024 20-30% Testis 4.021362567 Normal NA NA boxplot PSMC1P7 proteasome (prosome, macropain) 26S subunit, ATPase, 1 pseudogene 7 chr3 161328924 161330238 - 1315 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PSMC1P7 NA 0.012 90-100% Testis 3.298594815 CRC NA NA boxplot TUBBP2 tubulin beta pseudogene 2 chr13 41384773 41385183 - 411 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TUBBP2 NA 0.012 90-100% NA NA Breast_cancer,PAAD NA NA boxplot RP11-579D7.4 NA chr12 48789147 48790535 + 1389 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-579D7.4 NA 0.129 80-90% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-188C12.2 NA chr9 137776539 137789235 - 12697 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-188C12.2 NA 0.271 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot GS1-120K12.4 uncharacterized LOC101929069 chr1 185001527 185008683 + 7157 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GS1-120K12.4 NA 0.012 40-50% NA NA HCC NA NA boxplot ARF4-AS1 ARF4 antisense RNA 1 chr3 57597715 57600927 + 3213 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ARF4-AS1 NA 0.506 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-358D17.2 NA chr4 119042024 119043937 + 1914 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-358D17.2 NA 0.024 40-50% NA NA HCC,PAAD NA NA boxplot RP11-60C6.5 NA chr11 95037482 95038456 + 975 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-60C6.5 NA 0.024 60-70% Testis 1.89825506 Breast_cancer,CRC,PAAD NA NA boxplot TMEM108-AS1 TMEM108 antisense RNA 1 chr3 133246106 133257188 - 11083 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TMEM108-AS1 NA 0.012 70-80% NA NA HCC NA NA boxplot LINC01296 long intergenic non-protein coding RNA 1296 chr14 19284653 19337730 - 53078 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01296 NA 0.424 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD HCC(up),PAAD(up) NA boxplot CTD-2323K18.2 NA chr15 75512770 75513040 - 271 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2323K18.2 NA 0.035 90-100% NA NA Normal NA NA boxplot PSPHP1 phosphoserine phosphatase pseudogene 1 chr7 55764797 55773288 + 8492 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PSPHP1 NA 0.776 0-10% NA NA CHD,CRC,HCC,Normal,PAAD CHD(up) NA boxplot SRGAP3-AS4 SRGAP3 antisense RNA 4 chr3 9256759 9257507 + 749 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SRGAP3-AS4 NA 0.012 60-70% NA NA HCC NA NA boxplot OR7E90P olfactory receptor family 7 subfamily E member 90 pseudogene chr2 158874642 158875670 + 1029 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=OR7E90P NA 0.012 80-90% Testis 4.031928682 CRC NA NA boxplot RP11-461O7.1 NA chr16 56092987 56191094 - 98108 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-461O7.1 NA 0.047 40-50% Testis 1.939782127 Breast_cancer,HCC,Normal NA NA boxplot MEMO1P1 mediator of cell motility 1 pseudogene 1 chr21 36130489 36131376 + 888 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MEMO1P1 NA 0.988 0-10% NA NA CHD,CRC,HCC,Normal,PAAD CHD(down),CRC(down),PAAD(down) NA boxplot HSP90AB2P heat shock protein 90kDa alpha family class B member 2, pseudogene chr4 13333414 13338657 + 5244 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HSP90AB2P NA 0.106 90-100% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC024560.3 NA chr3 197578213 197627906 - 49694 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC024560.3 NA 0.906 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(up),PAAD(up) NA boxplot MIR24-2 microRNA 24-2 chr19 13834516 13836359 - 1844 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MIR24-2 NA 0.682 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),HCC(down) NA boxplot RP11-701H24.7 NA chr15 24991486 24991753 + 268 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-701H24.7 NA 0.329 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-93K22.13 NA chr3 130089433 130094304 - 4872 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-93K22.13 NA 0.165 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP1-257A7.5 NA chr6 13290018 13290490 - 473 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-257A7.5 NA 0.294 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP5-1085F17.3 NA chr20 32856621 32858751 + 2131 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-1085F17.3 NA 0.788 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down) NA boxplot RP11-356I2.1 NA chr6 137730170 137738983 - 8814 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-356I2.1 NA 0.047 40-50% Testis 3.380167606 HCC,Normal,PAAD NA NA boxplot RP11-397A16.1 NA chr18 55721063 55788761 + 67699 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-397A16.1 NA 0.035 20-30% Testis 4.906892038 Breast_cancer,CRC,HCC NA NA boxplot ELMO2P1 engulfment and cell motility 2 pseudogene 1 chr15 23083094 23121324 + 38231 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ELMO2P1 NA 0.012 80-90% NA NA Breast_cancer,CRC NA NA boxplot SUB1P1 SUB1 homolog, transcriptional regulator pseudogene 1 chr8 11790005 11790386 + 382 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SUB1P1 NA 0.024 80-90% NA NA Normal NA NA boxplot GUSBP4 glucuronidase, beta pseudogene 4 chr6 57919784 57930291 - 10508 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GUSBP4 NA 0.341 30-40% NA NA CHD,CRC,HCC,Normal,PAAD CHD(up) NA boxplot CCDC92B coiled-coil domain containing 92B chr17 2724420 2749420 - 25001 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CCDC92B NA 0.012 90-100% NA NA Breast_cancer,Normal NA NA boxplot GBA3 glucosidase, beta, acid 3 (gene/pseudogene) chr4 22692914 22819575 + 126662 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GBA3 exo_circ_026380 0.482 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up),HCC(up) NA boxplot RP11-332J15.3 NA chr5 6765891 6771953 + 6063 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-332J15.3 NA 0.012 30-40% Testis 4.625101735 Breast_cancer NA NA boxplot RP13-977J11.5 NA chr12 132126461 132126764 - 304 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP13-977J11.5 NA 0.094 80-90% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-312B8.1 NA chr1 6783892 6784843 - 952 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-312B8.1 NA 0.106 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-380I10.2 NA chr8 28225929 28227562 + 1634 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-380I10.2 NA 0.012 20-30% NA NA CRC NA NA boxplot EIF2S2P2 eukaryotic translation initiation factor 2 subunit 2 beta pseudogene 2 chr3 185245460 185246441 - 982 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=EIF2S2P2 NA 0.035 20-30% Liver 4.350993051 HCC,PAAD NA NA boxplot UBDP1 ubiquitin D pseudogene 1 chr6 29464596 29469806 - 5211 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=UBDP1 NA 0.012 0-10% Testis 4.906892038 Breast_cancer,Normal NA NA boxplot RP11-531F16.4 NA chr3 182921240 182921938 - 699 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-531F16.4 NA 0.082 80-90% NA NA CRC,HCC,Normal NA NA boxplot CXCR2P1 chemokine (C-X-C motif) receptor 2 pseudogene 1 chr2 218059155 218065729 - 6575 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CXCR2P1 NA 1 0-10% Spleen 3.916535954 Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down) NA boxplot ESRRAP2 estrogen-related receptor alpha pseudogene 2 chr13 21260015 21295003 + 34989 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ESRRAP2 NA 0.035 70-80% Testis 3.41553474 Breast_cancer,Normal NA NA boxplot RP11-1072C15.6 NA chr17 44689858 44693340 + 3483 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1072C15.6 NA 0.059 50-60% NA NA CRC,Normal,PAAD NA NA boxplot RP11-464F9.1 NA chr10 73674295 73730466 - 56172 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-464F9.1 NA 0.918 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-434D2.9 NA chr17 20532248 20532881 - 634 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-434D2.9 NA 0.035 90-100% Testis 4.906892038 CRC,HCC,Normal NA NA boxplot HMBOX1-IT1 HMBOX1 intronic transcript 1 chr8 28949676 28955955 + 6280 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HMBOX1-IT1 NA 0.059 30-40% NA NA CRC,Normal NA NA boxplot RP11-94C24.6 NA chr17 50503412 50508328 - 4917 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-94C24.6 NA 0.012 90-100% NA NA Breast_cancer,CRC NA NA boxplot RP11-142C4.4 NA chr11 58967596 58968291 - 696 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-142C4.4 NA 0.706 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down),HCC(down),PAAD(down) NA boxplot C9orf173-AS1 C9orf173 antisense RNA 1 chr9 137250219 137253497 - 3279 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=C9orf173-AS1 NA 0.024 70-80% NA NA Breast_cancer,PAAD NA NA boxplot RP11-228M15.1 NA chr15 23309607 23313276 + 3670 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-228M15.1 NA 0.435 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot IL21-AS1 IL21 antisense RNA 1 chr4 122618983 122689156 + 70174 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=IL21-AS1 NA 0.035 20-30% Testis 3.501480139 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot SCHLAP1 SWI/SNF complex antagonist associated with prostate cancer 1 (non-protein coding) chr2 180692104 180916939 + 224836 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SCHLAP1 NA 0.012 70-80% NA NA Breast_cancer,Normal NA NA boxplot RP11-769N19.2 NA chr12 62139999 62145643 - 5645 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-769N19.2 NA 0.082 70-80% Testis 4.632969157 CRC,HCC,Normal NA NA boxplot FAM183BP acyloxyacyl hydrolase (neutrophil) chr7 38685346 38687037 - 1692 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FAM183BP NA 0.012 90-100% NA NA Breast_cancer,CRC NA NA boxplot LINC00551 long intergenic non-protein coding RNA 551 chr13 106617810 106631359 + 13550 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00551 NA 0.459 10-20% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot XKRY2 X-linked Kx blood group related, Y-linked 2 chrY 18128610 18137029 + 8420 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=XKRY2 NA 0.012 90-100% NA NA HCC,Normal,PAAD NA NA boxplot RP3-507I15.2 NA chrX 141173235 141173588 - 354 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-507I15.2 NA 0.035 50-60% NA NA HCC,Normal,PAAD NA NA boxplot RP4-671O14.7 NA chr22 44210442 44229512 - 19071 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-671O14.7 NA 0.071 50-60% NA NA Breast_cancer,CRC,Normal,PAAD NA NA boxplot RP11-414H17.5 NA chr10 6197612 6202693 - 5082 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-414H17.5 NA 0.012 90-100% NA NA HCC NA NA boxplot RP1-197B17.5 NA chr12 47699401 47699917 - 517 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-197B17.5 NA 0.118 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot IFITM9P interferon induced transmembrane protein 9 pseudogene chr11 69303412 69303807 - 396 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=IFITM9P NA 0.012 50-60% NA NA Breast_cancer,Normal NA NA boxplot MTCO3P12 MT-CO3 pseudogene 12 chr1 634376 634922 + 547 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MTCO3P12 NA 0.871 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),PAAD(down) NA boxplot EEF1GP4 eukaryotic translation elongation factor 1 gamma pseudogene 4 chr3 161324913 161326219 - 1307 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=EEF1GP4 NA 0.012 10-20% NA NA Breast_cancer,CRC NA NA boxplot PRPS1P2 phosphoribosyl pyrophosphate synthetase 1 pseudogene 2 chr9 125150653 125151589 + 937 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PRPS1P2 NA 0.047 30-40% NA NA Normal,PAAD NA NA boxplot RP3-423B22.5 NA chr1 37556247 37556499 + 253 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-423B22.5 NA 0.906 10-20% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(up),HCC(up),PAAD(down) NA boxplot SNRPGP9 small nuclear ribonucleoprotein polypeptide G pseudogene 9 chr2 109251422 109251646 + 225 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SNRPGP9 NA 0.012 0-10% NA NA PAAD NA NA boxplot CTD-3118D7.1 NA chr15 29373602 29376956 - 3355 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-3118D7.1 NA 0.035 30-40% Testis 3.45337897 HCC,PAAD NA NA boxplot RP11-1000B6.8 NA chr15 32586105 32615158 - 29054 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1000B6.8 NA 0.518 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-269G24.6 NA chr17 63454993 63455817 + 825 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-269G24.6 NA 0.012 90-100% NA NA Breast_cancer NA NA boxplot RP13-395E19.3 NA chr15 32398956 32435233 - 36278 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP13-395E19.3 NA 0.329 70-80% NA NA CRC,HCC,Normal,PAAD NA NA boxplot FSIP2-AS1 FSIP2 antisense RNA 1 chr2 185783691 185800151 - 16461 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FSIP2-AS1 NA 0.365 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP4-773N10.4 NA chr1 110058340 110062555 + 4216 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-773N10.4 NA 0.729 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD PAAD(up) NA boxplot RP11-755F10.1 NA chr11 66244840 66246239 - 1400 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-755F10.1 NA 0.329 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot DBH-AS1 DBH antisense RNA 1 chr9 133654586 133657313 - 2728 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DBH-AS1 NA 0.118 50-60% Liver 1.492737867 Breast_cancer,CRC,HCC,PAAD NA NA boxplot RP11-184I16.3 NA chr1 43743471 43743741 + 271 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-184I16.3 NA 0.059 60-70% NA NA CRC,HCC,Normal NA NA boxplot MIR181A1HG MIR181A1 host gene chr1 198807493 198937429 - 129937 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MIR181A1HG exo_circ_053151 0.235 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot MIR503HG MIR503 host gene chrX 134543337 134546711 - 3375 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MIR503HG NA 0.353 20-30% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot AC020594.5 NA chr2 33555047 33563547 - 8501 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC020594.5 exo_circ_038332 0.153 70-80% NA NA CRC,HCC,Normal,PAAD NA NA boxplot MIR142 microRNA 142 chr17 58330884 58332508 - 1625 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MIR142 NA 0.318 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CRC(up) NA boxplot UBXN10-AS1 UBXN10 antisense RNA 1 chr1 20184242 20186486 - 2245 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=UBXN10-AS1 NA 0.106 30-40% NA NA Breast_cancer,CHD,CRC,HCC,Normal NA NA boxplot BCORP1 BCL6 corepressor pseudogene 1 chrY 19455431 19503153 - 47723 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=BCORP1 NA 0.353 20-30% Spleen 1.407221861 CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-506H20.1 NA chr5 55233934 55295201 + 61268 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-506H20.1 NA 0.059 60-70% Testis 1.49179357 CRC,HCC,Normal,PAAD NA NA boxplot RPL23AP97 ribosomal protein L23a pseudogene 97 chr13 114346167 114346637 + 471 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL23AP97 NA 0.165 70-80% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot MBL3P mannose-binding lectin family member 3, pseudogene chr10 79582298 79584877 - 2580 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MBL3P NA 0.012 10-20% NA NA Normal NA NA boxplot RP11-354E23.3 NA chr10 72730557 72731175 + 619 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-354E23.3 NA 0.059 60-70% NA NA CRC,Normal NA NA boxplot LINC00334 long intergenic non-protein coding RNA 334 chr21 45234340 45258730 + 24391 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00334 NA 0.035 40-50% NA NA Breast_cancer,HCC,Normal NA NA boxplot CELP carboxyl ester lipase pseudogene chr9 133079900 133087355 + 7456 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CELP NA 0.224 70-80% Pancreas 4.648448096 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP4-569M23.5 NA chr20 47318502 47320754 + 2253 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-569M23.5 NA 0.035 40-50% NA NA Breast_cancer,CRC,Normal,PAAD NA NA boxplot CXADRP2 coxsackie virus and adenovirus receptor pseudogene 2 chr15 21372793 21373881 - 1089 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CXADRP2 NA 0.012 90-100% Testis 4.833374432 HCC NA NA boxplot RP11-572O17.1 NA chr4 1712821 1713622 + 802 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-572O17.1 NA 0.035 50-60% NA NA Breast_cancer,CRC,Normal,PAAD NA NA boxplot FRG1KP FSHD region gene 1 family member K, pseudogene chr9 65646982 65652679 - 5698 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FRG1KP NA 0.106 50-60% NA NA HCC,Normal,PAAD NA NA boxplot RPL6P27 ribosomal protein L6 pseudogene 27 chr18 6462144 6463015 - 872 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL6P27 NA 1 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CRC(down) NA boxplot RP11-50D9.3 NA chr4 127840198 127844040 - 3843 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-50D9.3 NA 0.024 80-90% NA NA Breast_cancer,CRC,HCC NA NA boxplot RP11-330L19.1 NA chr15 64592979 64593326 + 348 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-330L19.1 NA 0.647 70-80% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC092610.12 NA chr7 4865432 4865804 - 373 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC092610.12 NA 0.012 70-80% Testis 4.906892038 NA NA NA boxplot RP11-146F11.5 NA chr16 30585907 30608593 + 22687 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-146F11.5 NA 0.012 90-100% NA NA Breast_cancer NA NA boxplot RP5-1103G7.10 NA chr20 267186 268857 + 1672 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-1103G7.10 NA 0.012 30-40% Testis 4.906892038 Breast_cancer,PAAD NA NA boxplot RP11-369J21.13 NA chr10 80053428 80053548 - 121 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-369J21.13 NA 0.094 50-60% NA NA HCC,Normal,PAAD NA NA boxplot AC090044.2 NA chr3 857124 858091 + 968 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC090044.2 NA 0.012 60-70% NA NA PAAD NA NA boxplot RP5-1039K5.12 NA chr22 37943050 37944898 + 1849 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-1039K5.12 NA 0.706 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),PAAD(down) NA boxplot VENTXP3 VENT homeobox pseudogene 3 chr12 74292324 74293096 + 773 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=VENTXP3 NA 0.012 70-80% NA NA Breast_cancer,HCC NA NA boxplot RP11-592N21.1 NA chr15 71341158 71341712 - 555 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-592N21.1 NA 0.929 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),PAAD(down) NA boxplot RP11-681L8.1 NA chr4 97334635 97633823 - 299189 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-681L8.1 NA 0.035 60-70% Testis 4.906892038 Breast_cancer,HCC,Normal NA NA boxplot AC130469.1 NA chr19 8575079 8576170 - 1092 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC130469.1 exo_circ_012284 0.259 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot AC027612.3 NA chr2 91686102 91714745 - 28644 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC027612.3 NA 0.212 90-100% Stomach 4.037602373 CRC,HCC,Normal,PAAD NA NA boxplot CTD-2012K14.2 NA chr16 67538557 67540106 - 1550 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2012K14.2 NA 0.424 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CTD-2308B18.4 NA chr5 124455373 124460098 + 4726 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2308B18.4 NA 0.012 20-30% NA NA HCC NA NA boxplot RP11-351I21.6 NA chr8 12378679 12380265 - 1587 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-351I21.6 NA 0.012 10-20% NA NA Breast_cancer,HCC NA NA boxplot RP11-46H11.3 NA chr12 132911470 132914732 + 3263 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-46H11.3 NA 0.294 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CTD-2325A15.5 NA chr5 42806394 42806997 + 604 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2325A15.5 NA 0.2 20-30% NA NA HCC,Normal,PAAD NA NA boxplot COL5A1-AS1 COL5A1 antisense RNA 1 chr9 134649385 134652843 - 3459 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=COL5A1-AS1 NA 0.012 90-100% NA NA PAAD NA NA boxplot CA15P1 carbonic anhydrase XV, pseudogene 1 chr22 19031564 19034564 - 3001 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CA15P1 NA 0.165 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-49K24.3 NA chr18 47076117 47076594 + 478 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-49K24.3 NA 0.012 90-100% NA NA Breast_cancer NA NA boxplot CLIP1-AS1 CLIP1 antisense RNA 1 chr12 122395542 122400857 + 5316 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CLIP1-AS1 NA 0.012 50-60% NA NA Normal NA NA boxplot RP11-272P10.2 NA chr9 13274510 13279187 - 4678 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-272P10.2 exo_circ_031146,exo_circ_055853 0.141 50-60% Testis 1.373346742 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-33E24.3 NA chr6 85731371 85732011 + 641 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-33E24.3 NA 0.035 40-50% Testis 4.906892038 HCC,PAAD NA NA boxplot CTD-3060P21.1 NA chr17 2962248 2965895 - 3648 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-3060P21.1 NA 0.212 70-80% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot LL22NC03-N14H11.1 NA chr22 15823197 15823890 + 694 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LL22NC03-N14H11.1 NA 0.035 60-70% NA NA HCC,PAAD NA NA boxplot CTD-2349P21.1 NA chr17 30830901 30831318 + 418 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2349P21.1 NA 0.012 70-80% NA NA PAAD NA NA boxplot RP11-382J24.2 NA chr8 22492631 22493044 + 414 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-382J24.2 NA 0.153 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-505E24.3 NA chr15 101043716 101049456 - 5741 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-505E24.3 NA 0.082 80-90% Pituitary 1.371129809 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot FBXO36P1 F-box protein 36 pseudogene 1 chr17 68095068 68095757 + 690 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FBXO36P1 NA 0.012 70-80% NA NA PAAD NA NA boxplot LINC01170 long intergenic non-protein coding RNA 1170 chr5 124059794 124405079 - 345286 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01170 exo_circ_038803 0.165 30-40% NA NA HCC,Normal,PAAD NA NA boxplot MTMR9LP myotubularin related protein 9-like, pseudogene chr1 32231658 32241620 - 9963 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MTMR9LP exo_circ_024047,exo_circ_038059 0.565 20-30% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot NLRP3P1 NA chrX 107974078 107985008 + 10931 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NLRP3P1 NA 0.024 80-90% NA NA Breast_cancer,CRC NA NA boxplot RP11-347J14.8 NA chr9 39384506 39405305 - 20800 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-347J14.8 NA 0.035 60-70% NA NA CRC,HCC NA NA boxplot USP17L9P ubiquitin specific peptidase 17-like family member 9, pseudogene chr4 9358383 9359975 + 1593 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=USP17L9P NA 0.012 90-100% NA NA HCC NA NA boxplot RP11-64D22.5 NA chr3 151797047 151808249 + 11203 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-64D22.5 NA 0.047 20-30% NA NA HCC,Normal NA NA boxplot OLMALINC oligodendrocyte maturation-associated long intergenic non-coding RNA chr10 100373615 100383368 + 9754 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=OLMALINC NA 0.694 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down),CRC(down),PAAD(up) NA boxplot CTD-2033D15.3 NA chr15 39588357 39588882 - 526 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2033D15.3 NA 0.424 70-80% NA NA CRC,HCC,Normal,PAAD NA NA boxplot AC010980.2 NA chr2 222318275 222352989 + 34715 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC010980.2 NA 0.235 50-60% Testis 3.701007535 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AP001171.1 NA chr21 20256752 20258820 - 2069 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AP001171.1 NA 0.212 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-466F5.4 NA chr1 165676310 165676781 + 472 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-466F5.4 NA 0.012 80-90% Brain 4.906892038 HCC NA NA boxplot HIST2H2BD histone cluster 2, H2bd (pseudogene) chr1 149843041 149843533 + 493 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HIST2H2BD NA 0.365 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-107F6.3 NA chr15 41770756 41772732 - 1977 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-107F6.3 NA 0.012 90-100% NA NA Normal NA NA boxplot RP11-122A21.2 NA chr8 109298598 109316513 + 17916 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-122A21.2 NA 0.012 0-10% NA NA HCC NA NA boxplot ANKRD20A11P ankyrin repeat domain 20 family member A11, pseudogene chr21 13909574 13980437 - 70864 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ANKRD20A11P NA 0.8 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down),CRC(up),HCC(up),PAAD(up) NA boxplot HIST1H1PS1 histone cluster 1, H1, pseudogene 1 chr6 26195554 26196633 + 1080 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HIST1H1PS1 NA 0.094 20-30% NA NA HCC,Normal NA NA boxplot RP11-835E18.5 NA chr18 5232876 5238526 - 5651 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-835E18.5 NA 0.129 40-50% Brain 4.906892038 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CTD-2218G20.1 NA chr5 32887990 32888145 - 156 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2218G20.1 NA 0.118 90-100% NA NA Normal,PAAD NA NA boxplot LINC01474 long intergenic non-protein coding RNA 1474 chr9 72871728 72874109 - 2382 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01474 NA 0.012 50-60% NA NA HCC NA NA boxplot ATF4P2 activating transcription factor 4 pseudogene 2 chrX 154580926 154581998 + 1073 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ATF4P2 NA 0.024 50-60% NA NA PAAD NA NA boxplot BHLHE40-AS1 BHLHE40 antisense RNA 1 chr3 4896809 4979961 - 83153 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=BHLHE40-AS1 NA 0.541 20-30% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up) NA boxplot BNIP3P1 BCL2/adenovirus E1B 19kDa interacting protein 3 pseudogene 1 chr14 28264390 28265974 + 1585 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=BNIP3P1 NA 0.435 70-80% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP1-35C21.2 NA chr1 177393287 177597709 - 204423 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-35C21.2 NA 0.047 40-50% Testis 3.480708431 CRC,Normal NA NA boxplot PCAT7 prostate cancer associated transcript 7 (non-protein coding) chr9 94555069 94568127 + 13059 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PCAT7 NA 0.071 30-40% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot RP11-552F3.10 NA chr17 75897060 75900148 + 3089 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-552F3.10 NA 0.129 70-80% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot PIK3CD-AS1 PIK3CD antisense RNA 1 chr1 9652610 9654586 - 1977 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PIK3CD-AS1 NA 0.447 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up) NA boxplot CTD-2007H13.3 NA chr5 98929171 98995013 + 65843 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2007H13.3 NA 0.447 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC007278.3 NA chr2 102438713 102440475 + 1763 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC007278.3 NA 0.188 10-20% Whole Blood 2.046286631 CRC,HCC,Normal,PAAD NA NA boxplot COX11P1 COX11 cytochrome c oxidase copper chaperone pseudogene 1 chr6 28446973 28447807 + 835 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=COX11P1 NA 0.012 90-100% NA NA Breast_cancer,Normal NA NA boxplot RP11-264B17.4 NA chr16 28973962 28978824 - 4863 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-264B17.4 exo_circ_020457 0.224 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-204M4.2 NA chr9 39817530 39818923 - 1394 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-204M4.2 NA 0.247 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-258C19.4 NA chrX 53164391 53164557 - 167 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-258C19.4 NA 0.047 60-70% NA NA HCC,PAAD NA NA boxplot USP9YP14 NA chrY 18481087 18487400 + 6314 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=USP9YP14 NA 0.082 80-90% Brain 4.906892038 CRC,HCC,Normal,PAAD NA NA boxplot RP3-400B16.4 NA chr6 4135423 4146053 + 10631 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-400B16.4 NA 0.082 80-90% Testis 4.350312989 CRC,HCC,Normal,PAAD NA NA boxplot RP11-739N20.3 NA chr1 204394541 204394774 + 234 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-739N20.3 NA 0.012 90-100% NA NA NA NA NA boxplot DOCK4-AS1 DOCK4 antisense RNA 1 chr7 111808516 111821773 + 13258 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DOCK4-AS1 NA 0.012 0-10% Testis 3.186211663 HCC,PAAD NA NA boxplot RP11-304L19.3 NA chr16 2094830 2097026 - 2197 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-304L19.3 NA 0.024 40-50% NA NA Breast_cancer,Normal,PAAD NA NA boxplot AC108039.1 NA chr2 61710076 61710978 - 903 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC108039.1 NA 0.012 90-100% Testis 4.134653294 Breast_cancer NA NA boxplot RP11-412D9.4 NA chr12 106954029 106955497 - 1469 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-412D9.4 NA 0.176 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC006994.2 NA chr2 210171518 210230383 + 58866 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC006994.2 NA 0.035 90-100% NA NA CRC,Normal NA NA boxplot SLC35E1P1 solute carrier family 35 member E1 pseudogene 1 chr13 20607268 20608131 + 864 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SLC35E1P1 NA 0.035 80-90% NA NA CRC,Normal,PAAD NA NA boxplot RP11-264L1.4 NA chr16 78495926 78506568 - 10643 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-264L1.4 NA 0.012 90-100% NA NA Normal NA NA boxplot AC022182.1 NA chr8 60910053 60966557 + 56505 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC022182.1 exo_circ_044800,exo_circ_050245 0.388 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP5-1050D4.5 NA chr17 4987706 4988446 + 741 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-1050D4.5 NA 0.294 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot LNX1-AS1 LNX1 antisense RNA 1 chr4 53496400 53549578 + 53179 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LNX1-AS1 NA 0.012 90-100% Testis 4.737721473 Breast_cancer,HCC NA NA boxplot AC106876.2 NA chr2 233012614 233015885 + 3272 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC106876.2 NA 0.024 20-30% NA NA Breast_cancer,HCC,PAAD NA NA boxplot C1orf143 chromosome 1 open reading frame 143 chr1 218510096 218525978 + 15883 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=C1orf143 NA 0.082 40-50% Testis 3.637961434 CRC,HCC,Normal NA NA boxplot ST13P18 suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein) pseudogene 18 chrX 93287733 93288759 - 1027 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ST13P18 NA 0.976 0-10% NA NA CHD,CRC,HCC,Normal,PAAD PAAD(down) NA boxplot CTD-3128G10.6 NA chr19 6748293 6751467 - 3175 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-3128G10.6 NA 0.082 80-90% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP4-673M15.1 NA chr7 44884953 44886393 + 1441 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-673M15.1 NA 0.376 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-134G8.5 NA chr1 201518703 201530474 + 11772 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-134G8.5 NA 0.624 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CTD-2540L5.5 NA chr14 70593314 70641204 - 47891 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2540L5.5 NA 0.835 20-30% NA NA CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-378J18.8 NA chr1 222658867 222661512 - 2646 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-378J18.8 NA 0.506 10-20% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-383C5.5 NA chr10 125718771 125719365 - 595 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-383C5.5 NA 0.035 40-50% NA NA Breast_cancer,Normal NA NA boxplot RP11-1006G14.4 NA chr15 72589691 72591845 + 2155 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1006G14.4 NA 0.553 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot HMGB2P1 high mobility group box 2 pseudogene 1 chr19 1203209 1203842 + 634 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HMGB2P1 NA 0.059 10-20% Testis 1.473598579 Breast_cancer,CRC,Normal NA NA boxplot RPL17P51 ribosomal protein L17 pseudogene 51 chr13 40224625 40224862 - 238 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL17P51 NA 0.012 70-80% NA NA Normal NA NA boxplot RP1-97D16.1 NA chr6 27737000 27738494 - 1495 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-97D16.1 NA 0.012 80-90% Testis 2.914844096 Breast_cancer NA NA boxplot CTD-2240J17.1 NA chr15 81410517 81419127 + 8611 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2240J17.1 NA 0.118 40-50% NA NA CRC,Normal,PAAD NA NA boxplot RP11-405M12.4 NA chr18 75073543 75074205 + 663 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-405M12.4 NA 0.624 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot CTC-459F4.9 NA chr19 27802838 27803472 + 635 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-459F4.9 NA 0.153 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-163E9.1 NA chr7 102380465 102382737 - 2273 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-163E9.1 NA 0.094 10-20% NA NA HCC,Normal NA NA boxplot LINC00642 long intergenic non-protein coding RNA 642 chr14 90455230 90458905 + 3676 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00642 NA 0.176 40-50% Testis 4.575091517 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-323F24.4 NA chr15 56908312 56908635 - 324 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-323F24.4 NA 0.024 20-30% NA NA CRC,PAAD NA NA boxplot RP11-791G16.2 NA chr4 82494786 82496278 - 1493 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-791G16.2 NA 0.012 10-20% NA NA Normal NA NA boxplot RP11-92C4.6 NA chr9 98943337 98943775 - 439 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-92C4.6 NA 0.035 40-50% NA NA HCC,Normal NA NA boxplot AC016894.1 NA chr2 61416887 61417197 - 311 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC016894.1 NA 0.059 40-50% Brain 4.906892038 CRC,Normal,PAAD NA NA boxplot RP11-480D4.6 NA chr5 8444949 8445535 - 587 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-480D4.6 NA 0.118 40-50% NA NA HCC,Normal NA NA boxplot CEP83-AS1 CEP83 antisense RNA 1 (head to head) chr12 94460003 94462484 + 2482 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CEP83-AS1 NA 0.106 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RPSAP47 ribosomal protein SA pseudogene 47 chr8 80558870 80559757 + 888 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPSAP47 NA 0.824 0-10% Testis 1.423595468 CHD,CRC,HCC,Normal,PAAD NA NA boxplot AC079466.1 NA chr19 28606688 28615229 + 8542 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC079466.1 NA 0.059 0-10% Pancreas 1.28857899 Breast_cancer,HCC,PAAD PAAD(up) NA boxplot THA1P threonine aldolase 1, pseudogene chr17 78248493 78254416 - 5924 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=THA1P NA 0.024 50-60% NA NA Breast_cancer,CRC,Normal NA NA boxplot RP11-520A21.1 NA chr3 40970541 40971578 - 1038 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-520A21.1 NA 0.024 40-50% Testis 4.906892038 Breast_cancer,Normal,PAAD NA NA boxplot CTB-49A3.5 NA chr5 133243764 133248781 + 5018 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTB-49A3.5 NA 0.047 70-80% Testis 4.299943466 Breast_cancer,Normal NA NA boxplot KB-7G2.9 NA chr22 16616170 16617114 + 945 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KB-7G2.9 NA 0.012 80-90% NA NA NA NA NA boxplot RP11-573D15.8 NA chr3 186579476 186772986 - 193511 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-573D15.8 NA 0.106 80-90% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot LINC01219 long intergenic non-protein coding RNA 1219 chr11 1991096 1993469 + 2374 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01219 NA 0.012 90-100% NA NA Breast_cancer,PAAD NA NA boxplot UBA52P6 ubiquitin A-52 residue ribosomal protein fusion product 1 pseudogene 6 chr9 22012155 22012536 + 382 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=UBA52P6 NA 0.118 40-50% Testis 2.70358548 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot EIF4EP5 eukaryotic translation initiation factor 4E pseudogene 5 chr8 14309033 14309672 + 640 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=EIF4EP5 NA 0.141 60-70% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-481J2.3 NA chr16 58392153 58392807 - 655 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-481J2.3 NA 0.094 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-686O6.2 NA chr2 202374932 202375604 - 673 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-686O6.2 NA 0.376 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-498P14.5 NA chr9 97200475 97238700 - 38226 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-498P14.5 NA 0.071 50-60% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot RP1-249I4.2 NA chr6 109826522 109828785 + 2264 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-249I4.2 exo_circ_027792 0.047 50-60% NA NA CRC,HCC,Normal NA NA boxplot AC006116.21 NA chr19 56354493 56368053 - 13561 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC006116.21 exo_circ_002980,exo_circ_014760 0.059 70-80% Testis 3.478956515 Normal NA NA boxplot HCG25 HLA complex group 25 (non-protein coding) chr6 33249534 33254989 + 5456 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HCG25 NA 0.329 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot FGF14-AS2 FGF14 antisense RNA 2 chr13 102394630 102395703 + 1074 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FGF14-AS2 NA 0.353 30-40% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP3-412A9.17 NA chr22 31051630 31068327 + 16698 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-412A9.17 NA 0.012 90-100% NA NA Breast_cancer NA NA boxplot LINC00659 long intergenic non-protein coding RNA 659 chr20 62774128 62775412 - 1285 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00659 NA 0.024 90-100% NA NA Breast_cancer,PAAD NA NA boxplot RP11-150C16.1 NA chr12 58920639 59064238 + 143600 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-150C16.1 NA 0.024 40-50% NA NA CRC,HCC NA NA boxplot RP11-166O4.6 NA chr7 67333047 67334383 + 1337 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-166O4.6 NA 0.106 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-1017G21.5 NA chr14 101948347 101949425 + 1079 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1017G21.5 NA 0.424 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot BAK1P1 BCL2-antagonist/killer 1 pseudogene 1 chr20 32690180 32690815 - 636 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=BAK1P1 NA 0.765 20-30% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot LINC01356 long intergenic non-protein coding RNA 1356 chr1 112820170 112850643 - 30474 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01356 NA 0.047 20-30% NA NA Breast_cancer,HCC,Normal NA NA boxplot EIF4EBP2P2 eukaryotic translation initiation factor 4E binding protein 2 pseudogene 2 chr15 42581156 42581488 - 333 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=EIF4EBP2P2 NA 0.012 90-100% NA NA Breast_cancer,Normal NA NA boxplot EGFEM1P EGF-like and EMI domain containing 1, pseudogene chr3 168249522 168830599 + 581078 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=EGFEM1P exo_circ_054173,exo_circ_054172,exo_circ_038531 0.071 30-40% Pituitary 2.278622954 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot GJA1P1 gap junction protein alpha 1 pseudogene 1 chr5 109051315 109052457 - 1143 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GJA1P1 NA 0.035 90-100% NA NA Breast_cancer,CHD,HCC,PAAD NA NA boxplot RP11-140I16.3 NA chr8 56222688 56223173 + 486 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-140I16.3 NA 0.082 40-50% NA NA CRC,HCC,Normal NA NA boxplot RP4-756H11.4 NA chr7 66556889 66557362 - 474 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-756H11.4 NA 0.035 90-100% NA NA Breast_cancer,Normal NA NA boxplot MARK3P3 MAP/microtubule affinity-regulating kinase 3 pseudogene 3 chr3 128848673 128849399 - 727 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MARK3P3 NA 0.024 40-50% NA NA Breast_cancer,PAAD NA NA boxplot AC004623.2 NA chr19 1376773 1377520 - 748 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC004623.2 NA 0.035 80-90% NA NA Breast_cancer,Normal,PAAD NA NA boxplot CTD-2537I9.18 NA chr19 55612490 55613097 - 608 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2537I9.18 NA 0.024 50-60% NA NA Breast_cancer,HCC NA NA boxplot HLA-K major histocompatibility complex, class I, K (pseudogene) chr6 29926459 29929232 + 2774 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HLA-K NA 0.729 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD PAAD(up) NA boxplot RP13-735L24.1 NA chr12 9367464 9397617 + 30154 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP13-735L24.1 NA 0.118 20-30% Testis 2.445986135 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-244J10.1 NA chr12 80102899 80103333 - 435 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-244J10.1 NA 0.918 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),PAAD(down) NA boxplot AC003088.1 NA chr7 110432239 110534754 - 102516 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC003088.1 NA 0.024 90-100% NA NA Normal NA NA boxplot RP11-539E19.2 NA chr10 51302566 51306709 + 4144 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-539E19.2 exo_circ_016675 0.035 50-60% Testis 4.453336708 HCC,Normal NA NA boxplot RP11-461L13.5 NA chr4 152317902 152318364 - 463 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-461L13.5 NA 0.047 60-70% Brain 2.569130587 Breast_cancer,CRC NA NA boxplot C20orf203 chromosome 20 open reading frame 203 chr20 32631652 32673941 - 42290 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=C20orf203 NA 0.047 80-90% NA NA Breast_cancer,CRC,Normal,PAAD NA NA boxplot HLA-H major histocompatibility complex, class I, H (pseudogene) chr6 29887752 29890482 + 2731 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HLA-H NA 0.929 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CRC(up),HCC(up),PAAD(up) NA boxplot MTND2P9 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 2 pseudogene 9 chr9 80565032 80565962 - 931 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MTND2P9 NA 0.012 60-70% NA NA Normal NA NA boxplot RAB28P5 RAB28, member RAS oncogene family pseudogene 5 chrX 136847384 136848034 + 651 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RAB28P5 NA 0.024 40-50% NA NA CRC,Normal,PAAD NA NA boxplot CTB-91J4.1 NA chr17 36116177 36177510 + 61334 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTB-91J4.1 exo_circ_040375 0.529 10-20% NA NA CRC,HCC,Normal,PAAD NA NA boxplot DPP9-AS1 DPP9 antisense RNA 1 chr19 4679282 4685948 + 6667 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DPP9-AS1 NA 0.141 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-1275H24.2 NA chr7 5425770 5426401 + 632 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1275H24.2 NA 0.024 90-100% NA NA HCC NA NA boxplot RP11-757F18.5 NA chr3 112133423 112135359 + 1937 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-757F18.5 exo_circ_043685,exo_circ_032918,exo_circ_054003,exo_circ_012441,exo_circ_027401 0.176 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot GRM7-AS1 GRM7 antisense RNA 1 chr3 7519741 7560333 - 40593 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GRM7-AS1 NA 0.035 70-80% NA NA CRC,HCC,Normal NA NA boxplot RP11-517B11.4 NA chr3 131517831 131520880 + 3050 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-517B11.4 NA 0.035 50-60% Testis 3.973612504 Normal,PAAD NA NA boxplot RP11-588H23.3 NA chr12 70468080 70543040 + 74961 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-588H23.3 NA 0.659 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),PAAD(down) NA boxplot ENO1P3 enolase 1, (alpha) pseudogene 3 chr3 124862094 124863317 - 1224 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ENO1P3 NA 0.024 10-20% NA NA PAAD NA NA boxplot FLJ42102 uncharacterized LOC399923 chr11 71382601 71423423 - 40823 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FLJ42102 NA 0.024 80-90% NA NA Breast_cancer,CRC,Normal NA NA boxplot RPSAP14 ribosomal protein SA pseudogene 14 chrX 74031462 74031820 + 359 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPSAP14 NA 0.059 70-80% NA NA CHD,CRC,PAAD NA NA boxplot LINC00628 long intergenic non-protein coding RNA 628 chr1 204368431 204369719 - 1289 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00628 NA 0.024 0-10% NA NA Breast_cancer,PAAD NA NA boxplot XX-CR54.1 NA chr1 248691760 248743943 + 52184 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=XX-CR54.1 NA 0.047 60-70% Testis 4.796475881 Breast_cancer,CRC,HCC,Normal NA NA boxplot CTC-457E21.9 NA chr19 22665552 22716991 - 51440 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-457E21.9 NA 0.012 20-30% Testis 4.709817299 HCC NA NA boxplot CTC-534B23.1 NA chr5 85549409 85549952 + 544 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-534B23.1 NA 0.047 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot ATP1A1-AS1 ATP1A1 antisense RNA 1 chr1 116392247 116418622 - 26376 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ATP1A1-AS1 NA 0.894 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-366M4.15 NA chr4 165026261 165026944 - 684 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-366M4.15 NA 0.012 60-70% Testis 4.906892038 Breast_cancer,PAAD NA NA boxplot KB-1027C11.4 NA chr22 21885282 21885673 - 392 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KB-1027C11.4 NA 0.694 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-284F21.11 NA chr1 156614742 156615288 - 547 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-284F21.11 NA 0.012 90-100% NA NA Breast_cancer NA NA boxplot RYKP1 receptor-like tyrosine kinase pseudogene 1 chr17 4222091 4223828 + 1738 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RYKP1 NA 0.012 10-20% NA NA Breast_cancer,CRC,Normal NA NA boxplot PRDX3P1 peroxiredoxin 3 pseudogene 1 chr22 38722743 38723505 - 763 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PRDX3P1 NA 0.012 0-10% NA NA HCC,Normal NA NA boxplot RP11-655M14.12 NA chr11 67605521 67606642 + 1122 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-655M14.12 NA 0.012 70-80% NA NA Breast_cancer NA NA boxplot CTC-250I14.3 NA chr19 13139617 13141147 - 1531 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-250I14.3 NA 0.235 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot LINC01010 long intergenic non-protein coding RNA 1010 chr6 134437716 134504581 + 66866 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01010 NA 0.024 90-100% Testis 3.777599664 Breast_cancer,HCC,Normal NA NA boxplot RP11-63E5.6 NA chr8 311133 331026 - 19894 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-63E5.6 NA 0.012 90-100% NA NA CRC NA NA boxplot FAM157B family with sequence similarity 157 member B chr9 138216187 138252994 + 36808 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FAM157B NA 0.729 10-20% Whole Blood 1.441752151 CHD,CRC,HCC,Normal,PAAD CRC(up),PAAD(up) NA boxplot RP11-288K12.1 NA chr12 1695830 1698044 - 2215 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-288K12.1 NA 0.012 90-100% NA NA HCC NA NA boxplot SNX33P1 sorting nexin 33 pseudogene 1 chr19 16034776 16036537 - 1762 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SNX33P1 NA 0.012 70-80% Testis 4.891180307 Breast_cancer,Normal NA NA boxplot RP11-692P14.1 NA chrX 8007378 8018160 + 10783 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-692P14.1 NA 0.035 10-20% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-113I24.1 NA chr1 189989570 189993097 - 3528 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-113I24.1 NA 0.024 60-70% Brain 4.906892038 Normal NA NA boxplot SLC14A2-AS1 SLC14A2 antisense RNA 1 chr18 45423764 45483218 - 59455 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SLC14A2-AS1 NA 0.012 80-90% NA NA Normal NA NA boxplot RP1-267D11.6 NA chr12 120116907 120119000 + 2094 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-267D11.6 NA 0.482 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-983P16.2 NA chr12 53012104 53013921 + 1818 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-983P16.2 NA 0.094 60-70% NA NA Breast_cancer,CRC,Normal,PAAD NA NA boxplot RP11-438N5.4 NA chr11 3961277 3961538 + 262 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-438N5.4 NA 0.035 30-40% NA NA CRC,Normal NA NA boxplot RP4-739H11.3 NA chr1 40669089 40687588 - 18500 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-739H11.3 NA 0.129 60-70% Testis 4.906892038 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-332J15.4 NA chr5 6779458 6779998 + 541 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-332J15.4 NA 0.024 0-10% NA NA Breast_cancer,PAAD NA NA boxplot RP5-1093G23.1 NA chr7 79139829 79177210 + 37382 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-1093G23.1 NA 0.012 30-40% NA NA Normal NA NA boxplot RP11-617F23.1 NA chr15 90074512 90082207 - 7696 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-617F23.1 NA 0.788 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down) NA boxplot AC092687.5 NA chr2 10589166 10604830 + 15665 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC092687.5 NA 0.306 40-50% Testis 4.827488107 CRC,HCC,Normal,PAAD NA NA boxplot RP11-557H15.3 NA chr6 134428240 134520585 - 92346 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-557H15.3 NA 0.176 30-40% Testis 2.913794896 CRC,HCC,Normal,PAAD NA NA boxplot CTB-107G13.1 NA chr7 103445207 103514007 + 68801 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTB-107G13.1 NA 0.165 30-40% Bladder 1.241348068 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CTB-161M19.4 NA chr5 119006347 119070890 - 64544 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTB-161M19.4 NA 0.035 20-30% Testis 1.103119548 HCC,Normal,PAAD NA NA boxplot AC006116.22 NA chr19 56319790 56322310 - 2521 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC006116.22 NA 0.471 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),HCC(down),PAAD(down) NA boxplot RP11-104L21.3 NA chr1 167457742 167459891 - 2150 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-104L21.3 NA 0.141 50-60% NA NA CRC,HCC,Normal NA NA boxplot BRD7P2 bromodomain containing 7 pseudogene 2 chr3 160100850 160102793 + 1944 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=BRD7P2 NA 0.988 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CRC(down) NA boxplot AC097495.2 NA chr2 68832044 68837724 + 5681 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC097495.2 NA 0.165 50-60% Testis 3.518184267 CRC,HCC,Normal,PAAD NA NA boxplot RP11-18H21.1 NA chr4 152100754 152104720 + 3967 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-18H21.1 NA 0.859 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot ITM2BP1 integral membrane protein 2B pseudogene 1 chr17 27612588 27613251 - 664 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ITM2BP1 NA 0.012 30-40% NA NA HCC NA NA boxplot EIF1AXP1 eukaryotic translation initiation factor 1A, X-linked pseudogene 1 chr1 16685621 16686055 - 435 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=EIF1AXP1 NA 1 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down) NA boxplot PRR34-AS1 PRR34 antisense RNA 1 chr22 46053705 46057210 + 3506 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PRR34-AS1 NA 0.953 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up),PAAD(down) NA boxplot ATP5A1P10 ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1 pseudogene 10 chr9 66721158 66722760 + 1603 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ATP5A1P10 NA 0.035 70-80% NA NA CRC,HCC,Normal NA NA boxplot AC007362.3 NA chr2 205756469 205764006 - 7538 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC007362.3 NA 0.012 80-90% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot SYNPR-AS1 SYNPR antisense RNA 1 chr3 63423596 63550051 - 126456 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SYNPR-AS1 NA 0.012 30-40% Stomach 3.080967428 HCC NA NA boxplot RP11-84G21.1 NA chr12 79934901 79942712 + 7812 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-84G21.1 NA 0.729 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot RP5-1180E21.5 NA chr1 111184415 111185061 - 647 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-1180E21.5 NA 0.8 10-20% NA NA CRC,HCC,Normal,PAAD CHD(down) NA boxplot LINC00319 long intergenic non-protein coding RNA 319 chr21 43446601 43453893 + 7293 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00319 NA 0.035 10-20% NA NA PAAD NA NA boxplot RP11-162D16.2 NA chr9 121369906 121463237 + 93332 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-162D16.2 NA 0.918 0-10% Testis 4.775232155 CRC,HCC,Normal,PAAD CHD(down),HCC(down) NA boxplot GHET1 gastric carcinoma proliferation enhancing transcript 1 chr7 148987527 148989432 + 1906 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GHET1 NA 0.059 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-131N11.4 NA chr10 60734342 60741828 + 7487 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-131N11.4 NA 0.024 10-20% Pituitary 1.591700925 Normal,PAAD NA NA boxplot ST13P19 suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein) pseudogene 19 chr1 210265636 210267241 - 1606 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ST13P19 NA 0.953 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down),CRC(down),PAAD(down) NA boxplot RP11-807C20.2 NA chr17 5512040 5512537 - 498 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-807C20.2 NA 0.188 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot C21orf62-AS1 C21orf62 antisense RNA 1 chr21 32772100 32893735 + 121636 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=C21orf62-AS1 NA 0.694 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down) NA boxplot RP11-9M16.2 NA chr9 114396724 114398503 - 1780 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-9M16.2 NA 0.671 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot MROH4P maestro heat-like repeat family member 4, pseudogene chr8 142567260 142577881 - 10622 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MROH4P NA 0.035 30-40% Testis 4.693562342 Breast_cancer,CRC,Normal,PAAD NA NA boxplot CTC-524C5.5 NA chr17 5469092 5470360 + 1269 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-524C5.5 NA 0.012 80-90% Testis 4.906892038 HCC NA NA boxplot BCAR1P1 breast cancer anti-estrogen resistance 1 pseudogene 1 chr15 20073699 20074334 - 636 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=BCAR1P1 NA 0.012 80-90% NA NA Breast_cancer,Normal,PAAD NA NA boxplot RP11-731C17.2 NA chr3 136837338 136839021 - 1684 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-731C17.2 NA 0.612 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-5C23.1 NA chr7 154951226 154952188 + 963 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-5C23.1 NA 0.694 20-30% NA NA CRC,HCC,Normal,PAAD CHD(down),PAAD(down) NA boxplot RP11-320G10.1 NA chr3 18013226 18041603 + 28378 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-320G10.1 exo_circ_052655,exo_circ_049001 0.212 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-483I13.6 NA chr1 108200413 108202743 + 2331 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-483I13.6 NA 0.247 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot TBC1D3P1 NA chr17 60008437 60017498 - 9062 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TBC1D3P1 NA 0.024 30-40% Testis 4.906892038 Breast_cancer,HCC,Normal NA NA boxplot RP5-1148A21.3 NA chr6 63571005 63572408 - 1404 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-1148A21.3 NA 0.176 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-350G8.5 NA chr1 154402328 154406564 - 4237 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-350G8.5 NA 0.247 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-83N9.5 NA chr9 136107808 136109424 - 1617 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-83N9.5 NA 0.129 70-80% Testis 1.093146067 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC079305.10 NA chr2 177264359 177265515 + 1157 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC079305.10 NA 0.518 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CTB-52I2.7 NA chr19 18009440 18009881 - 442 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTB-52I2.7 NA 0.094 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-261C10.5 NA chr1 243135898 243140588 + 4691 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-261C10.5 NA 0.153 70-80% NA NA CRC,HCC,Normal NA NA boxplot LINC00630 long intergenic non-protein coding RNA 630 chrX 102769161 102885406 + 116246 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00630 NA 0.906 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up),PAAD(up) NA boxplot RP11-768G7.2 NA chr3 117678693 117690932 - 12240 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-768G7.2 NA 0.012 80-90% Testis 4.703522353 NA NA NA boxplot RP11-298A8.2 NA chrX 140931738 140997448 + 65711 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-298A8.2 NA 0.012 60-70% NA NA PAAD NA NA boxplot RP11-367B6.2 NA chr10 75742740 75743755 + 1016 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-367B6.2 exo_circ_031180,exo_circ_050683 0.118 30-40% Testis 1.584501919 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot FOXC2-AS1 FOXC2 antisense RNA 1 chr16 86565145 86567761 - 2617 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FOXC2-AS1 NA 0.024 70-80% NA NA PAAD NA NA boxplot RPL21P3 ribosomal protein L21 pseudogene 3 chr20 18485265 18486052 + 788 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL21P3 NA 0.082 70-80% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP4-718D20.3 NA chr20 19693209 19697576 - 4368 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-718D20.3 NA 0.024 80-90% Testis 3.275139735 Breast_cancer,HCC,Normal NA NA boxplot RP11-542M13.2 NA chr16 85981750 85984723 + 2974 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-542M13.2 NA 0.035 10-20% NA NA HCC,Normal,PAAD NA NA boxplot LINC00205 long intergenic non-protein coding RNA 205 chr21 45293285 45297354 + 4070 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00205 NA 0.482 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot LRRC37A7P leucine-rich repeat containing 37 member A7, pseudogene chr18 31724198 31726956 + 2759 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LRRC37A7P NA 0.024 10-20% NA NA Breast_cancer,Normal,PAAD NA NA boxplot RP13-494C23.1 NA chr4 25864881 25869550 - 4670 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP13-494C23.1 NA 0.024 80-90% Spleen 1.683131043 HCC,Normal NA NA boxplot RP11-561N12.5 NA chr7 64569428 64570437 - 1010 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-561N12.5 NA 0.012 10-20% NA NA Breast_cancer,CRC NA NA boxplot RP11-77P6.2 NA chr10 86521945 86525101 + 3157 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-77P6.2 NA 0.106 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot PFN1P8 profilin 1 pseudogene 8 chr1 146957117 146957659 - 543 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PFN1P8 NA 0.012 90-100% NA NA CRC NA NA boxplot RP11-403H13.1 NA chr9 6902670 6978859 + 76190 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-403H13.1 NA 0.106 70-80% NA NA CRC,Normal NA NA boxplot MTND4LP12 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4L pseudogene 12 chr2 143098123 143098417 - 295 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MTND4LP12 NA 0.012 70-80% NA NA HCC NA NA boxplot MARCKSL1P2 MARCKS-like 1 pseudogene 2 chr6 138402585 138403560 - 976 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MARCKSL1P2 NA 0.012 90-100% Testis 2.961522928 Breast_cancer,CRC NA NA boxplot RP11-334J6.7 NA chr9 131497479 131500191 - 2713 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-334J6.7 NA 0.506 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot RP11-449D8.2 NA chr18 24673163 24674348 + 1186 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-449D8.2 NA 0.012 60-70% NA NA HCC NA NA boxplot PNMA6B paraneoplastic Ma antigen family member 6B (pseudogene) chrX 153075769 153076968 - 1200 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PNMA6B NA 0.035 40-50% NA NA HCC,PAAD NA NA boxplot RP11-494O16.4 NA chr22 49851425 49853364 + 1940 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-494O16.4 NA 0.012 90-100% NA NA Breast_cancer,CRC,HCC NA NA boxplot CTB-50E14.5 NA chr19 42485076 42485714 - 639 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTB-50E14.5 NA 0.929 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(down),PAAD(down) NA boxplot PCAT6 prostate cancer associated transcript 6 (non-protein coding) chr1 202810954 202812156 + 1203 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PCAT6 NA 0.106 70-80% Testis 1.892925011 Breast_cancer,CRC,Normal,PAAD NA NA boxplot RP11-761N21.2 NA chr3 40761545 40761799 + 255 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-761N21.2 NA 0.929 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-927P21.4 NA chr17 64778842 64778937 - 96 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-927P21.4 NA 0.094 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot LINC01547 long intergenic non-protein coding RNA 1547 chr21 44932814 44939913 - 7100 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01547 NA 0.388 20-30% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot TNPO1P2 transportin 1 pseudogene 2 chr17 18460391 18463055 + 2665 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TNPO1P2 NA 0.035 80-90% Esophagus 4.906892038 HCC,Normal,PAAD NA NA boxplot RP11-678G15.1 NA chr18 7814118 7815730 + 1613 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-678G15.1 NA 0.024 10-20% NA NA PAAD NA NA boxplot CTC-242N15.1 NA chr5 87205408 87240145 - 34738 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-242N15.1 NA 0.012 10-20% NA NA Breast_cancer,PAAD NA NA boxplot USP32P3 ubiquitin specific peptidase 32 pseudogene 3 chr17 20415547 20431008 + 15462 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=USP32P3 NA 0.506 20-30% Testis 1.622815024 Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-138E9.2 NA chr18 10323132 10372380 - 49249 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-138E9.2 NA 0.012 10-20% Testis 4.906892038 Breast_cancer,Normal NA NA boxplot RP11-569G9.7 NA chr1 26326688 26327033 + 346 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-569G9.7 NA 0.024 70-80% NA NA CRC,Normal NA NA boxplot AC010518.2 NA chr19 54296194 54296252 - 59 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC010518.2 NA 0.082 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot PPP1R26-AS1 PPP1R26 antisense RNA 1 chr9 135462727 135480777 - 18051 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PPP1R26-AS1 NA 0.247 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot NPAP1P3 nuclear pore associated protein 1 pseudogene 3 chr10 87376896 87378481 + 1586 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NPAP1P3 NA 0.035 60-70% Testis 2.010343346 Breast_cancer,HCC,Normal,PAAD NA NA boxplot HSPA9P1 heat shock protein family A (Hsp70) member 9 pseudogene 1 chr2 221961737 221963765 + 2029 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HSPA9P1 NA 0.024 90-100% Testis 1.712935409 Breast_cancer,CHD,CRC,Normal,PAAD NA NA boxplot RP11-701H16.4 NA chr18 13644815 13645685 - 871 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-701H16.4 NA 0.129 60-70% NA NA Normal,PAAD NA NA boxplot CTC-498M16.2 NA chr5 88408982 88439090 - 30109 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-498M16.2 NA 0.012 70-80% Testis 1.352270447 Breast_cancer,HCC NA NA boxplot RP13-52K8.1 NA chrX 81408938 81427276 + 18339 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP13-52K8.1 NA 0.4 20-30% Spleen 4.906892038 CRC,HCC,Normal,PAAD NA NA boxplot RP11-532F6.4 NA chr6 711533 750729 + 39197 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-532F6.4 NA 0.082 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-848G14.2 NA chr5 69607099 69624049 + 16951 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-848G14.2 NA 0.859 10-20% NA NA CRC,HCC,Normal,PAAD CRC(up),HCC(up),PAAD(up) NA boxplot CTD-2503O16.4 NA chr5 74917726 75023928 - 106203 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2503O16.4 exo_circ_044323 0.212 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-638D14.1 NA chr2 146833501 146834038 - 538 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-638D14.1 exo_circ_053520 0.012 30-40% NA NA PAAD NA NA boxplot HSP90AA6P heat shock protein 90kDa alpha family class A member 6, pseudogene chr4 170581470 170605450 - 23981 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HSP90AA6P NA 0.012 90-100% NA NA Normal NA NA boxplot RP11-164C12.1 NA chr15 93430659 93431217 - 559 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-164C12.1 NA 0.012 90-100% Testis 4.906892038 HCC NA NA boxplot RP11-588G21.1 NA chr12 69660034 69661429 - 1396 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-588G21.1 NA 0.035 0-10% NA NA Normal NA NA boxplot AC004453.8 NA chr7 44467897 44468304 + 408 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC004453.8 NA 0.929 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(down),PAAD(down) NA boxplot AC000123.3 NA chr7 127349833 127350293 - 461 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC000123.3 NA 0.294 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot SRSF9P1 serine/arginine-rich splicing factor 9 pseudogene 1 chr21 36295173 36295702 - 530 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SRSF9P1 NA 0.035 0-10% NA NA Breast_cancer,CHD,Normal CHD(up) NA boxplot AC009120.6 NA chr16 74305127 74335346 - 30220 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC009120.6 NA 0.706 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot RP11-90P5.2 NA chr8 38148741 38163772 + 15032 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-90P5.2 NA 0.047 70-80% NA NA HCC,Normal NA NA boxplot RP11-1100L3.7 NA chr12 52076841 52082084 - 5244 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1100L3.7 NA 0.424 0-10% Nerve 4.906892038 Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot RPS15AP10 ribosomal protein S15a pseudogene 10 chr1 45645816 45646197 - 382 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPS15AP10 NA 0.212 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot OR1X5P olfactory receptor family 1 subfamily X member 5 pseudogene chr5 177836434 177837646 - 1213 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=OR1X5P NA 0.047 40-50% Testis 4.906892038 Breast_cancer,HCC,Normal NA NA boxplot LYPLA2P2 lysophospholipase II pseudogene 2 chr19 7879445 7880120 - 676 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LYPLA2P2 NA 0.118 80-90% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot AC012314.19 NA chr19 54209092 54209418 - 327 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC012314.19 NA 0.024 90-100% Whole Blood 4.906892038 CRC,Normal NA NA boxplot RP11-400F19.8 NA chr17 42536510 42562062 + 25553 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-400F19.8 exo_circ_028839 0.224 70-80% NA NA CRC,HCC,Normal NA NA boxplot LINC00977 long intergenic non-protein coding RNA 977 chr8 129216467 129241250 - 24784 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00977 exo_circ_055593 0.106 20-30% Spleen 4.906892038 HCC,Normal NA NA boxplot RP11-102L12.2 NA chr15 38502853 38504981 + 2129 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-102L12.2 NA 0.118 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-1166P10.1 NA chr16 31975803 32003728 + 27926 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1166P10.1 NA 0.106 70-80% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot RP11-547D24.1 NA chr1 2013213 2015530 - 2318 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-547D24.1 NA 0.082 50-60% Brain 4.102216613 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CCNT2-AS1 CCNT2 antisense RNA 1 chr2 134735464 134918710 - 183247 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CCNT2-AS1 exo_circ_008727,exo_circ_015783 0.906 0-10% NA NA CHD,CRC,HCC,Normal,PAAD CHD(up) NA boxplot SETP21 SET pseudogene 21 chr5 60459848 60460739 - 892 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SETP21 NA 0.129 70-80% Prostate 3.648880594 Breast_cancer,CHD,CRC,HCC,Normal NA NA boxplot RP11-109N23.4 NA chr14 73057925 73059415 - 1491 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-109N23.4 NA 0.165 60-70% Pituitary 4.19678599 CRC,HCC,Normal,PAAD NA NA boxplot RP11-305L7.6 NA chr9 91119062 91182762 + 63701 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-305L7.6 NA 0.071 60-70% NA NA CRC,Normal NA NA boxplot RP11-16E12.2 NA chr15 31221999 31230838 - 8840 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-16E12.2 NA 0.671 20-30% Spleen 1.192514296 Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot RP3-406A7.5 NA chr6 136419847 136420425 - 579 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-406A7.5 NA 0.012 30-40% NA NA Breast_cancer NA NA boxplot HMGB3P21 high mobility group box 3 pseudogene 21 chr7 97135015 97135561 - 547 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HMGB3P21 NA 0.012 10-20% NA NA Normal,PAAD NA NA boxplot CTD-3028N15.3 NA chr14 45079849 45080189 + 341 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-3028N15.3 NA 0.012 90-100% NA NA CRC NA NA boxplot RP11-407G23.4 NA chr16 57247350 57248492 + 1143 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-407G23.4 NA 0.071 70-80% NA NA CRC,Normal,PAAD NA NA boxplot PPBPP2 pro-platelet basic protein pseudogene 2 chr4 74054038 74055399 - 1362 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PPBPP2 NA 0.047 80-90% Testis 4.739229104 Normal NA NA boxplot RP4-785G19.5 NA chr20 34234840 34281173 - 46334 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-785G19.5 NA 0.035 20-30% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot RP11-671M22.4 NA chr15 84394512 84395514 + 1003 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-671M22.4 NA 0.082 70-80% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RPS20P33 ribosomal protein S20 pseudogene 33 chr14 105374618 105374971 + 354 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPS20P33 NA 0.047 90-100% NA NA CRC,Normal NA NA boxplot RP11-114G11.5 NA chr7 57404771 57416203 + 11433 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-114G11.5 NA 0.047 40-50% NA NA Breast_cancer,CRC,HCC NA NA boxplot GK-IT1 GK intronic transcript 1 chrX 30671635 30672166 + 532 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GK-IT1 NA 0.035 90-100% Whole Blood 2.532294918 CRC,Normal NA NA boxplot CTB-79E8.2 NA chr5 172690454 172697720 - 7267 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTB-79E8.2 NA 0.165 10-20% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot RP11-712B9.5 NA chr11 95145437 95146004 + 568 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-712B9.5 NA 0.247 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-162A12.4 NA chr18 76805151 76805736 - 586 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-162A12.4 NA 0.306 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-629O19.1 NA chr12 85567878 85568239 + 362 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-629O19.1 NA 0.012 40-50% NA NA Normal NA NA boxplot PPATP1 phosphoribosyl pyrophosphate amidotransferase pseudogene 1 chr3 87051192 87052738 - 1547 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PPATP1 NA 0.341 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP1-117O3.2 NA chr1 32987075 33032469 + 45395 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-117O3.2 NA 0.047 60-70% Testis 2.214593296 HCC,PAAD NA NA boxplot RP11-843A23.1 NA chr11 78533176 78558565 + 25390 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-843A23.1 exo_circ_045341 0.035 70-80% NA NA Normal,PAAD NA NA boxplot LINC00431 long intergenic non-protein coding RNA 431 chr13 110965704 110990579 + 24876 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00431 NA 0.129 90-100% NA NA CRC,HCC,Normal,PAAD NA NA boxplot LINC01266 long intergenic non-protein coding RNA 1266 chr3 536231 846015 + 309785 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01266 NA 0.035 40-50% NA NA CRC,HCC,Normal NA NA boxplot RP13-554M15.2 NA chr12 132565071 132566425 + 1355 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP13-554M15.2 NA 0.106 40-50% NA NA Breast_cancer,CRC,Normal,PAAD NA NA boxplot ASS1P5 argininosuccinate synthetase 1 pseudogene 5 chrX 115664895 115666133 + 1239 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ASS1P5 NA 0.024 80-90% NA NA Breast_cancer,PAAD NA NA boxplot AC098824.6 NA chr2 42826322 42827617 - 1296 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC098824.6 NA 0.024 50-60% NA NA Normal,PAAD NA NA boxplot PARP4P2 poly(ADP-ribose) polymerase family member 4 pseudogene 2 chr13 19349137 19407962 + 58826 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PARP4P2 NA 0.188 90-100% Testis 3.78127388 Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-357H14.17 NA chr17 48635923 48647023 - 11101 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-357H14.17 NA 0.341 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot FTLP2 ferritin, light polypeptide pseudogene 2 chrX 30630298 30630825 + 528 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FTLP2 NA 0.094 90-100% Liver 3.467255646 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP1-59D14.9 NA chr17 2424179 2424412 - 234 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-59D14.9 NA 0.012 80-90% NA NA Normal NA NA boxplot RP4-616B8.6 NA chr20 38962472 38962993 + 522 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-616B8.6 NA 0.024 90-100% NA NA PAAD NA NA boxplot NXF4 nuclear RNA export factor 4 pseudogene chrX 102549965 102571695 + 21731 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NXF4 NA 0.012 90-100% Testis 3.440672764 Breast_cancer,HCC NA NA boxplot RPS20P35 ribosomal protein S20 pseudogene 35 chr17 38855314 38855670 + 357 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPS20P35 NA 0.329 90-100% Testis 4.455190925 CHD,CRC,HCC,Normal,PAAD NA NA boxplot HCG16 HLA complex group 16 (non-protein coding) chr6 28986800 28988536 + 1737 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HCG16 NA 0.012 0-10% NA NA Breast_cancer,CRC NA NA boxplot FLJ31104 uncharacterized LOC441072 chr5 55995167 56003649 + 8483 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FLJ31104 NA 0.235 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RPL26P35 ribosomal protein L26 pseudogene 35 chr18 76834429 76834888 - 460 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL26P35 NA 0.012 60-70% Testis 4.521820782 Normal NA NA boxplot MTND5P15 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 5 pseudogene 15 chr3 177010719 177011067 - 349 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MTND5P15 NA 0.012 90-100% NA NA NA NA NA boxplot AK4P3 adenylate kinase 4 pseudogene 3 chr12 31615771 31616439 - 669 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AK4P3 NA 0.259 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP4-530I15.6 NA chr20 50645471 50662275 + 16805 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-530I15.6 NA 0.012 90-100% NA NA Normal NA NA boxplot ST6GALNAC4P1 ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 4 pseudogene 1 chr13 19818121 19818619 - 499 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ST6GALNAC4P1 exo_circ_010965 0.094 40-50% NA NA CHD,CRC,Normal,PAAD NA NA boxplot CTD-3012A18.1 NA chr11 29519076 29552639 + 33564 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-3012A18.1 NA 0.012 50-60% NA NA Breast_cancer,CRC NA NA boxplot RP11-434C1.6 NA chr12 11516425 11521686 - 5262 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-434C1.6 NA 0.012 90-100% NA NA Normal NA NA boxplot RP11-1055B8.1 NA chr17 81395609 81397144 - 1536 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1055B8.1 NA 0.553 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-343N15.2 NA chr1 121412719 121429274 + 16556 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-343N15.2 NA 0.035 70-80% NA NA Breast_cancer,CRC,HCC NA NA boxplot RP11-196O2.1 NA chr7 36095272 36100653 + 5382 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-196O2.1 NA 0.012 90-100% Testis 4.906892038 CRC NA NA boxplot AC013402.5 NA chr2 104659337 104664837 + 5501 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC013402.5 NA 0.035 20-30% Testis 4.82149243 Breast_cancer,HCC,Normal NA NA boxplot RP11-191L9.4 NA chr22 47631674 47855600 + 223927 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-191L9.4 NA 0.035 10-20% NA NA Breast_cancer,PAAD NA NA boxplot PDCL3P4 phosducin-like 3 pseudogene 4 chr3 101712472 101713191 + 720 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PDCL3P4 NA 0.847 20-30% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down),HCC(down),PAAD(down) NA boxplot RP11-231L11.3 NA chr3 140972744 140973255 + 512 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-231L11.3 NA 0.035 10-20% NA NA Normal,PAAD NA NA boxplot RP11-468E2.5 NA chr14 24139445 24140444 + 1000 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-468E2.5 NA 0.376 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP5-1180D12.1 NA chr12 3610307 3612003 - 1697 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-1180D12.1 NA 0.765 10-20% NA NA CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-110I1.14 NA chr11 119065263 119065677 - 415 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-110I1.14 NA 0.188 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot AP000688.11 NA chr21 36060432 36064408 + 3977 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AP000688.11 NA 0.082 40-50% Testis 4.906892038 HCC,Normal,PAAD NA NA boxplot RP11-430K21.2 NA chr9 111802980 111803435 + 456 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-430K21.2 exo_circ_050313 0.035 90-100% NA NA Normal,PAAD NA NA boxplot RP11-351O2.2 NA chr12 127624153 127626267 + 2115 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-351O2.2 NA 0.012 60-70% Stomach 4.547024762 Breast_cancer,PAAD NA NA boxplot RP4-781K5.9 NA chr1 234644666 234647571 + 2906 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-781K5.9 NA 0.012 70-80% NA NA PAAD NA NA boxplot PHEX-AS1 PHEX antisense RNA 1 chrX 22162733 22172983 - 10251 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PHEX-AS1 NA 0.012 10-20% NA NA PAAD NA NA boxplot RP11-223I10.1 NA chr2 231052040 231052637 + 598 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-223I10.1 NA 0.012 80-90% NA NA Breast_cancer,HCC NA NA boxplot AC008984.2 NA chr19 54308915 54337168 - 28254 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC008984.2 NA 0.788 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP5-1125N11.2 NA chr1 30824228 30834431 + 10204 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-1125N11.2 NA 0.082 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP13-644M16.4 NA chr4 69181660 69182372 + 713 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP13-644M16.4 NA 0.012 60-70% Liver 4.906892038 HCC,Normal NA NA boxplot RP11-211G3.3 NA chr3 187702313 187733849 + 31537 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-211G3.3 NA 0.024 70-80% NA NA HCC,Normal,PAAD NA NA boxplot RP11-517C16.2 NA chr16 84459259 84467361 - 8103 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-517C16.2 NA 0.106 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-697E2.7 NA chr15 90275129 90275716 + 588 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-697E2.7 NA 0.153 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-358M14.2 NA chr9 4299390 4306046 + 6657 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-358M14.2 NA 0.012 90-100% NA NA CRC NA NA boxplot RP11-142O6.1 NA chr17 31133182 31138518 + 5337 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-142O6.1 NA 0.035 80-90% NA NA Normal NA NA boxplot RP5-940J5.9 NA chr12 6537794 6538370 - 577 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-940J5.9 NA 0.812 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot CTC-332L22.1 NA chr5 109687802 109688329 - 528 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-332L22.1 NA 0.035 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot LINC00924 long intergenic non-protein coding RNA 924 chr15 95433095 95507847 + 74753 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00924 NA 0.212 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot TAS2R64P taste 2 receptor member 64 pseudogene chr12 11076769 11079171 - 2403 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TAS2R64P NA 0.153 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-551G24.3 NA chr1 247015068 247017291 + 2224 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-551G24.3 NA 0.012 10-20% Testis 4.341051007 HCC NA NA boxplot RP11-12M5.3 NA chr1 179816184 179818191 - 2008 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-12M5.3 NA 0.024 80-90% Pituitary 3.461871837 Breast_cancer,HCC NA NA boxplot RP11-7M10.2 NA chr15 84753122 84754502 + 1381 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-7M10.2 NA 0.035 70-80% NA NA CRC,Normal NA NA boxplot RP11-93O14.3 NA chr16 46673443 46673927 - 485 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-93O14.3 NA 0.035 60-70% NA NA Breast_cancer,Normal NA NA boxplot CTA-363E6.7 NA chr16 19501689 19502286 + 598 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTA-363E6.7 NA 0.376 20-30% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot RP11-65B23.5 NA chr9 87799501 87821803 - 22303 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-65B23.5 NA 0.035 80-90% NA NA Breast_cancer,CRC,HCC,PAAD NA NA boxplot RP5-1050D4.2 NA chr17 4972851 4974681 + 1831 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-1050D4.2 NA 0.4 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC010522.1 NA chr19 57826461 57826778 - 318 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC010522.1 NA 0.012 90-100% Testis 2.159828176 Breast_cancer,HCC NA NA boxplot RP11-138P22.1 NA chr17 27874645 27881237 + 6593 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-138P22.1 exo_circ_040354,exo_circ_046777,exo_circ_001929 0.153 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-244F12.2 NA chr15 63070025 63071911 - 1887 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-244F12.2 NA 0.271 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot AC007395.3 NA chr2 70687142 70691824 + 4683 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC007395.3 NA 0.012 90-100% Testis 4.667380805 Normal NA NA boxplot HEXA-AS1 HEXA antisense RNA 1 chr15 72376113 72378788 + 2676 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HEXA-AS1 NA 0.259 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-325O24.2 NA chr6 127659690 127660579 - 890 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-325O24.2 NA 0.165 80-90% NA NA HCC,Normal NA NA boxplot FAR1-IT1 FAR1 intronic transcript 1 chr11 13669327 13670149 + 823 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FAR1-IT1 NA 0.082 30-40% NA NA CRC,Normal,PAAD NA NA boxplot LINC01483 long intergenic non-protein coding RNA 1483 chr17 69577251 69903000 + 325750 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01483 NA 0.118 50-60% NA NA Normal NA NA boxplot BACE2-IT1 BACE2 intronic transcript 1 chr21 41180097 41180626 + 530 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=BACE2-IT1 NA 0.082 10-20% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-168P13.1 NA chr13 43787591 43787852 + 262 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-168P13.1 NA 0.012 40-50% NA NA PAAD NA NA boxplot RP13-1039J1.4 NA chr2 110386411 110433673 - 47263 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP13-1039J1.4 NA 0.553 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-227G15.3 NA chr17 32324431 32360700 + 36270 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-227G15.3 NA 0.929 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down) NA boxplot AC115115.4 NA chr2 112346011 112346258 + 248 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC115115.4 NA 0.047 80-90% NA NA CRC,Normal NA NA boxplot RP11-499E18.1 NA chr4 102418602 102450010 - 31409 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-499E18.1 NA 0.318 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RASA3-IT1 RASA3 intronic transcript 1 chr13 114107569 114108820 - 1252 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RASA3-IT1 NA 0.2 40-50% Pituitary 2.978089911 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-290D2.3 NA chr13 45350323 45351350 + 1028 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-290D2.3 NA 0.071 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-700H6.2 NA chr17 50944104 50948750 + 4647 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-700H6.2 NA 0.012 60-70% NA NA Breast_cancer,Normal NA NA boxplot BNIP3P4 BCL2/adenovirus E1B 19kDa interacting protein 3 pseudogene 4 chr9 64810865 64811429 - 565 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=BNIP3P4 NA 0.024 20-30% NA NA PAAD NA NA boxplot LINC00460 long intergenic non-protein coding RNA 460 chr13 106376563 106378217 + 1655 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00460 NA 0.024 70-80% Brain 3.775696402 Breast_cancer,HCC,PAAD NA NA boxplot RP11-408H20.3 NA chr18 31131456 31132494 + 1039 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-408H20.3 NA 0.012 30-40% Skin 3.070483906 CRC NA NA boxplot FAM138F family with sequence similarity 138 member F chr19 76163 77686 - 1524 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FAM138F NA 0.024 30-40% NA NA CHD,PAAD NA NA boxplot RP11-443B7.2 NA chr1 234957231 234959989 + 2759 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-443B7.2 NA 0.035 70-80% Whole Blood 4.906892038 CRC,Normal NA NA boxplot RP11-353K11.1 NA chr2 96812239 96813657 - 1419 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-353K11.1 NA 0.141 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP4-593H12.1 NA chr7 107579557 107580057 - 501 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-593H12.1 NA 0.035 40-50% NA NA HCC NA NA boxplot RP3-467L1.6 NA chr1 7776383 7776775 + 393 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-467L1.6 NA 0.082 30-40% NA NA CRC,HCC,Normal NA NA boxplot AC008088.4 NA chr17 20530042 20530881 - 840 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC008088.4 NA 0.071 80-90% Testis 4.123314513 HCC,Normal,PAAD NA NA boxplot RP11-71C5.2 NA chr13 44437207 44452827 + 15621 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-71C5.2 NA 0.012 70-80% Testis 4.906892038 PAAD NA NA boxplot RP11-730B22.1 NA chr7 5009164 5009328 - 165 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-730B22.1 NA 0.024 20-30% NA NA Breast_cancer,Normal NA NA boxplot TERF1P3 telomeric repeat binding factor (NIMA-interacting) 1 pseudogene 3 chr4 136355110 136356336 - 1227 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TERF1P3 NA 0.118 90-100% NA NA Breast_cancer,HCC,Normal NA NA boxplot RP11-120D5.1 NA chrX 10847877 11111141 - 263265 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-120D5.1 NA 0.659 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down) NA boxplot RP13-88F20.1 NA chrX 93222220 93225015 - 2796 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP13-88F20.1 NA 0.071 90-100% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RHOA-IT1 RHOA intronic transcript 1 chr3 49365145 49367006 - 1862 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RHOA-IT1 NA 0.094 50-60% NA NA Breast_cancer,CRC,Normal NA NA boxplot AC023590.1 NA chr8 118282139 118400605 + 118467 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC023590.1 NA 0.259 20-30% Spleen 2.408972776 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-44K6.2 NA chr8 39914229 39915721 + 1493 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-44K6.2 NA 0.035 30-40% NA NA CRC,Normal NA NA boxplot LINC01558 long intergenic non-protein coding RNA 1558 chr6 167784537 167796859 - 12323 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01558 NA 0.353 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot AC141586.5 NA chr16 2603350 2630494 + 27145 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC141586.5 NA 0.894 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-170N16.3 NA chr4 122881878 122884712 - 2835 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-170N16.3 NA 0.247 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CTD-2010I16.1 NA chr11 6488186 6489377 - 1192 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2010I16.1 NA 0.082 40-50% NA NA CRC,Normal,PAAD NA NA boxplot PHC1P1 polyhomeotic homolog 1 (Drosophila) pseudogene 1 chr12 55411727 55414787 - 3061 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PHC1P1 NA 0.988 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up) NA boxplot RP11-305L7.1 NA chr9 91104957 91107304 - 2348 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-305L7.1 exo_circ_050490 0.424 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CTD-2554C21.1 NA chr19 37779686 37792865 + 13180 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2554C21.1 NA 0.918 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(down),PAAD(down) NA boxplot LA16c-325D7.2 NA chr16 2866348 2867618 - 1271 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LA16c-325D7.2 NA 0.024 80-90% NA NA PAAD NA NA boxplot RP11-753D20.3 NA chr14 88175391 88180198 + 4808 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-753D20.3 NA 0.024 40-50% Testis 4.656230488 HCC NA NA boxplot RP11-342D14.1 NA chrX 45183251 45333917 + 150667 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-342D14.1 NA 0.024 60-70% Testis 1.184757273 Normal NA NA boxplot CAHM colon adenocarcinoma hypermethylated (non-protein coding) chr6 163413065 163413960 - 896 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CAHM NA 0.176 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CTD-2354A18.1 NA chr18 73324941 73349878 + 24938 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2354A18.1 NA 0.012 0-10% Testis 3.215969992 Breast_cancer,HCC HCC(up) NA boxplot RP11-467L13.5 NA chr12 31754720 31755121 + 402 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-467L13.5 NA 0.153 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-505D17.1 NA chr7 7640752 8004053 + 363302 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-505D17.1 exo_circ_014167 0.929 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down),HCC(down) NA boxplot RP11-121C6.5 NA chr12 56411944 56413190 - 1247 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-121C6.5 NA 0.024 80-90% NA NA Breast_cancer,PAAD NA NA boxplot RP5-1157M23.2 NA chr3 52239258 52241097 + 1840 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-1157M23.2 NA 0.271 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CTD-2207P18.2 NA chr14 74614693 74616647 - 1955 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2207P18.2 NA 0.024 50-60% Artery 1.325547253 Breast_cancer,PAAD NA NA boxplot LL22NC03-30E12.10 NA chr22 22155582 22155942 + 361 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LL22NC03-30E12.10 NA 0.012 90-100% Testis 4.336049019 CRC NA NA boxplot RP11-84A19.3 NA chr1 31789130 31791322 + 2193 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-84A19.3 NA 0.188 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-983G14.1 NA chr15 21552795 21653276 + 100482 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-983G14.1 NA 0.012 90-100% NA NA Normal NA NA boxplot MIR6820 microRNA 6820 chr22 37948352 38002889 + 54538 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MIR6820 NA 0.824 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CRC(up) NA boxplot RP11-6N17.3 NA chr17 47929682 47933106 - 3425 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-6N17.3 NA 0.071 40-50% NA NA Breast_cancer,Normal,PAAD NA NA boxplot CTD-2619J13.3 NA chr19 58362585 58366591 + 4007 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2619J13.3 NA 0.012 80-90% NA NA Breast_cancer,Normal NA NA boxplot RP11-242D8.1 NA chr17 43148368 43171037 - 22670 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-242D8.1 NA 0.882 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),PAAD(up) NA boxplot EEF1A1P13 eukaryotic translation elongation factor 1 alpha 1 pseudogene 13 chr5 14651941 14653329 - 1389 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=EEF1A1P13 NA 1 0-10% NA NA CHD,CRC,HCC,Normal,PAAD CHD(up) NA boxplot RP11-214K3.20 NA chr12 123968023 123968579 - 557 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-214K3.20 NA 0.118 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot HSPE1P18 heat shock protein family E (Hsp10) member 1 pseudogene 18 chr11 118208932 118209211 - 280 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HSPE1P18 NA 0.118 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-383C5.3 NA chr10 125683229 125709677 + 26449 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-383C5.3 NA 0.188 60-70% Testis 1.400807471 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot FTH1P4 ferritin, heavy polypeptide 1 pseudogene 4 chr3 128764466 128765018 - 553 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FTH1P4 NA 0.024 90-100% NA NA HCC,Normal,PAAD NA NA boxplot RP11-571E6.1 NA chrX 47273366 47274390 - 1025 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-571E6.1 NA 0.012 70-80% NA NA PAAD NA NA boxplot ANP32BP2 acidic nuclear phosphoprotein 32 family member B pseudogene 2 chr22 44651835 44652379 + 545 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ANP32BP2 NA 0.047 40-50% NA NA CRC,HCC,Normal NA NA boxplot RP11-209D14.4 NA chr17 19929372 19929737 - 366 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-209D14.4 NA 0.082 60-70% NA NA CRC,Normal,PAAD NA NA boxplot RP11-496I2.5 NA chr14 19267115 19268164 + 1050 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-496I2.5 NA 0.094 90-100% Testis 1.445470716 Breast_cancer,HCC,Normal NA NA boxplot RP11-30B1.1 NA chr7 3337889 3338601 + 713 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-30B1.1 NA 0.024 0-10% NA NA PAAD NA NA boxplot LINC00667 long intergenic non-protein coding RNA 667 chr18 5237826 5246508 + 8683 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00667 NA 0.988 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-83M16.4 NA chr5 67692812 67693200 - 389 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-83M16.4 NA 0.082 60-70% Nerve 1.713832572 CRC,HCC,Normal,PAAD NA NA boxplot PXN-AS1 PXN antisense RNA 1 chr12 120201291 120213138 + 11848 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PXN-AS1 NA 0.871 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot LYPLA2P1 lysophospholipase II pseudogene 1 chr6 33365548 33366243 - 696 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LYPLA2P1 NA 0.388 70-80% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RPL10P3 ribosomal protein L10 pseudogene 3 chr9 117180628 117181095 - 468 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL10P3 NA 0.988 10-20% NA NA CHD,CRC,HCC,Normal,PAAD CRC(down),PAAD(down) NA boxplot CTC-507E2.2 NA chr17 35596904 35597128 - 225 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-507E2.2 NA 0.024 70-80% NA NA Breast_cancer,HCC,Normal NA NA boxplot SCAMP1-AS1 SCAMP1 antisense RNA 1 chr5 78342365 78360507 - 18143 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SCAMP1-AS1 NA 0.929 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down),CRC(down),PAAD(down) NA boxplot RP11-87G24.6 NA chr17 76957023 76958222 - 1200 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-87G24.6 NA 0.012 20-30% NA NA CRC NA NA boxplot CTD-2342N23.3 NA chr8 134722947 134723949 + 1003 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2342N23.3 NA 0.106 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-803D5.1 NA chr2 111321433 111324812 - 3380 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-803D5.1 NA 0.376 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-457M11.5 NA chr6 26686241 26687964 + 1724 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-457M11.5 NA 0.118 70-80% NA NA CRC,HCC,Normal,PAAD NA NA boxplot AC006277.2 NA chr19 2915146 2926807 - 11662 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC006277.2 NA 0.129 40-50% Testis 1.120748354 CRC,HCC,Normal,PAAD NA NA boxplot HSPD1P1 heat shock protein family D (Hsp60) member 1 pseudogene 1 chr5 21882585 21884310 + 1726 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HSPD1P1 NA 0.965 10-20% NA NA CHD,CRC,HCC,Normal,PAAD CRC(down) NA boxplot RP11-157J24.2 NA chr6 1528364 1528911 - 548 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-157J24.2 exo_circ_055170 0.106 30-40% NA NA HCC,Normal NA NA boxplot RP11-731F5.2 NA chr14 105644496 105649057 - 4562 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-731F5.2 NA 0.929 0-10% Spleen 2.79656512 Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RAC1P5 ras-related C3 botulinum toxin substrate 1 pseudogene 5 chr4 107203349 107203924 - 576 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RAC1P5 NA 0.012 90-100% NA NA HCC NA NA boxplot RP11-83N9.6 NA chr9 136122521 136124363 + 1843 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-83N9.6 NA 0.035 90-100% NA NA Breast_cancer,HCC,Normal NA NA boxplot CTD-2666L21.1 NA chr19 12195015 12237767 + 42753 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2666L21.1 exo_circ_042893,exo_circ_014305 0.682 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot ADGRE4P adhesion G protein-coupled receptor E4, pseudogene chr19 6952500 6997872 - 45373 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ADGRE4P exo_circ_047945 0.435 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-252K23.1 NA chr16 75321890 75325048 - 3159 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-252K23.1 NA 0.035 80-90% NA NA CRC,HCC NA NA boxplot LA16c-306E5.3 NA chr16 3458071 3515564 + 57494 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LA16c-306E5.3 exo_circ_014272 0.847 20-30% NA NA CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-320P7.2 NA chr12 70180338 70202004 + 21667 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-320P7.2 NA 0.071 80-90% NA NA HCC,Normal NA NA boxplot RP5-1074L1.1 NA chr1 110286375 110339171 - 52797 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-1074L1.1 NA 0.376 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP3-393E18.1 NA chr6 159526062 159526527 - 466 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-393E18.1 NA 0.047 90-100% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot PFN1P2 profilin 1 pseudogene 2 chr1 120432204 120434052 - 1849 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PFN1P2 NA 0.012 10-20% NA NA Breast_cancer,Normal NA NA boxplot RP11-389G6.4 NA chr3 97836986 97874691 - 37706 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-389G6.4 NA 0.294 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot BTBD10P2 BTB (POZ) domain containing 10 pseudogene 2 chr6 149794763 149795746 + 984 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=BTBD10P2 NA 0.094 60-70% NA NA Breast_cancer,CRC,Normal,PAAD NA NA boxplot LINC00540 long intergenic non-protein coding RNA 540 chr13 22040975 22276524 + 235550 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00540 NA 0.459 20-30% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot CTC-559E9.8 NA chr19 19892433 19895847 - 3415 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-559E9.8 NA 0.047 20-30% NA NA Normal NA NA boxplot RP11-71L14.3 NA chr16 68367325 68370262 - 2938 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-71L14.3 NA 0.094 80-90% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-407N17.4 NA chr14 39174885 39175880 - 996 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-407N17.4 NA 0.176 70-80% Testis 1.311159946 CRC,HCC,Normal,PAAD NA NA boxplot RPL3P1 ribosomal protein L3 pseudogene 1 chr21 36168970 36170180 - 1211 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL3P1 NA 0.024 20-30% NA NA Breast_cancer,CRC,PAAD NA NA boxplot RP11-392A14.9 NA chr9 35001342 35002994 - 1653 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-392A14.9 NA 0.012 70-80% NA NA NA NA NA boxplot AC006129.1 NA chr19 41531206 41532174 + 969 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC006129.1 NA 0.271 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot IGJP1 immunoglobulin J polypeptide pseudogene 1 chr8 84980073 84980547 - 475 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=IGJP1 NA 0.012 80-90% NA NA HCC NA NA boxplot SEPT7P6 septin 7 pseudogene 6 chr7 152367519 152368661 + 1143 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SEPT7P6 NA 0.976 0-10% NA NA CHD,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-75A9.1 NA chrX 46418450 46420079 - 1630 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-75A9.1 NA 0.024 80-90% NA NA Breast_cancer,Normal NA NA boxplot RP11-223P11.3 NA chr10 126988095 127026507 - 38413 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-223P11.3 NA 0.306 60-70% Testis 2.840469973 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-1074O12.1 NA chr14 39385404 39387102 - 1699 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1074O12.1 NA 0.047 90-100% NA NA HCC,Normal NA NA boxplot AC034220.3 NA chr5 132311285 132369916 - 58632 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC034220.3 exo_circ_049446 0.271 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot MTCO1P19 MT-CO1 pseudogene 19 chrX 102796251 102797093 + 843 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MTCO1P19 NA 0.047 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-295D4.5 NA chr16 4430522 4431103 + 582 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-295D4.5 NA 0.012 90-100% NA NA Breast_cancer,Normal NA NA boxplot YAP1P1 Yes associated protein 1 pseudogene 1 chr6 147406889 147408281 + 1393 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=YAP1P1 NA 0.024 80-90% Testis 1.79465967 Breast_cancer,CRC,Normal NA NA boxplot VN2R19P vomeronasal 2 receptor 19 pseudogene chr19 58012589 58025926 - 13338 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=VN2R19P NA 0.012 90-100% Testis 2.020706002 Breast_cancer,HCC NA NA boxplot RP11-1148O4.1 NA chr17 30068632 30069631 + 1000 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1148O4.1 NA 0.129 80-90% Testis 1.306187031 Breast_cancer,CRC,HCC,Normal NA NA boxplot RP11-219D15.3 NA chr3 139349024 139349371 - 348 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-219D15.3 NA 0.012 80-90% NA NA Normal,PAAD NA NA boxplot RP3-466P17.1 NA chr6 145735570 145737218 + 1649 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-466P17.1 NA 0.094 50-60% NA NA HCC,Normal NA NA boxplot CTD-2647L4.1 NA chr8 29110573 29140729 + 30157 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2647L4.1 NA 0.129 50-60% Testis 4.742513149 CRC,HCC,Normal NA NA boxplot RP11-285G1.14 NA chr10 44958917 44959458 - 542 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-285G1.14 NA 0.024 70-80% NA NA Normal,PAAD NA NA boxplot RP11-352M15.1 NA chr12 45481871 45610620 - 128750 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-352M15.1 NA 0.094 60-70% Testis 4.855549826 CRC,HCC,Normal,PAAD NA NA boxplot RP1-86C11.7 NA chr6 27122657 27123221 - 565 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-86C11.7 NA 0.471 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-716H6.1 NA chr11 122294938 122301763 - 6826 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-716H6.1 NA 0.024 70-80% NA NA CRC,HCC NA NA boxplot RP11-571M6.17 NA chr12 57803838 57804415 + 578 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-571M6.17 NA 0.129 70-80% NA NA HCC,Normal,PAAD NA NA boxplot RP11-215P8.4 NA chr5 134429051 134460615 - 31565 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-215P8.4 NA 0.024 40-50% NA NA HCC NA NA boxplot RP11-18I14.11 NA chr10 102483039 102483559 + 521 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-18I14.11 NA 0.329 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot SLC9A9-AS1 SLC9A9 antisense RNA 1 chr3 143342246 143347071 + 4826 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SLC9A9-AS1 NA 0.012 50-60% Testis 4.906892038 CRC NA NA boxplot RP1-80N2.3 NA chr6 6680309 6683633 - 3325 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-80N2.3 NA 0.306 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-661A12.5 NA chr8 143541973 143549729 - 7757 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-661A12.5 NA 0.129 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-532F6.5 NA chr6 761675 780648 + 18974 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-532F6.5 NA 0.024 80-90% NA NA HCC NA NA boxplot HSP90B2P heat shock protein 90kDa beta family member 2, pseudogene chr15 99257632 99260015 + 2384 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HSP90B2P NA 0.247 10-20% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-907D1.2 NA chr14 97116355 97121501 + 5147 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-907D1.2 NA 0.012 90-100% Testis 4.906892038 Breast_cancer,PAAD NA NA boxplot RP11-247I13.3 NA chr22 31559483 31559939 + 457 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-247I13.3 NA 0.071 60-70% NA NA Breast_cancer,CRC,HCC,PAAD NA NA boxplot RP11-361L15.5 NA chr16 67006672 67009481 - 2810 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-361L15.5 NA 0.012 60-70% NA NA Breast_cancer,CRC,Normal NA NA boxplot KB-1615E4.2 NA chr8 100475675 100501148 + 25474 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KB-1615E4.2 NA 0.024 60-70% NA NA Breast_cancer,HCC NA NA boxplot CH507-154B10.1 NA chr21 6630182 6670695 - 40514 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CH507-154B10.1 NA 0.588 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD PAAD(up) NA boxplot CTD-2555C10.3 NA chr14 102545254 102555826 + 10573 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2555C10.3 NA 0.035 20-30% Small Intestine 2.091252084 Breast_cancer,PAAD NA NA boxplot ZNRF3-IT1 ZNRF3 intronic transcript 1 chr22 28992721 29018620 + 25900 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ZNRF3-IT1 NA 0.047 10-20% NA NA Breast_cancer,PAAD NA NA boxplot RP11-147L13.11 NA chr17 68126666 68129586 + 2921 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-147L13.11 NA 0.929 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot PAPPA-AS2 PAPPA antisense RNA 2 chr9 116285829 116288769 - 2941 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PAPPA-AS2 NA 0.035 80-90% NA NA HCC,Normal NA NA boxplot RP11-314N14.1 NA chr4 131380013 131541397 + 161385 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-314N14.1 NA 0.047 80-90% Testis 4.906892038 Breast_cancer,HCC,Normal NA NA boxplot CTC-435M10.6 NA chr19 41425359 41426237 + 879 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-435M10.6 NA 0.082 50-60% NA NA CRC,HCC,Normal NA NA boxplot TUBB8P12 tubulin beta 8 pseudogene 12 chr18 47390 49557 - 2168 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TUBB8P12 NA 0.012 90-100% NA NA Breast_cancer,Normal NA NA boxplot LINC01565 long intergenic non-protein coding RNA 1565 chr3 128572000 128576086 - 4087 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01565 NA 0.2 60-70% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot RP11-1018N14.5 NA chr17 51435427 51445802 + 10376 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1018N14.5 NA 0.129 10-20% Spleen 2.676671492 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot YWHAEP7 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon pseudogene 7 chr17 37828305 37884743 - 56439 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=YWHAEP7 NA 0.035 30-40% NA NA Breast_cancer,CRC,Normal NA NA boxplot RP3-401D24.1 NA chr6 60281444 60544955 + 263512 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-401D24.1 NA 0.129 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-359K18.3 NA chr1 162560227 162561308 - 1082 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-359K18.3 NA 0.012 70-80% Testis 4.668324856 Breast_cancer NA NA boxplot RP11-304M2.6 NA chr11 112967 125927 - 12961 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-304M2.6 NA 0.047 70-80% Testis 4.906892038 CRC,HCC,PAAD NA NA boxplot CYP2G1P cytochrome P450 family 2 subfamily G member 1, pseudogene chr19 40890826 40900508 + 9683 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CYP2G1P NA 0.012 70-80% NA NA Breast_cancer NA NA boxplot RP11-456O19.3 NA chr18 56138612 56143221 + 4610 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-456O19.3 NA 0.012 70-80% NA NA Breast_cancer NA NA boxplot RPS16P5 ribosomal protein S16 pseudogene 5 chr6 53336943 53337346 - 404 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPS16P5 exo_circ_044485 0.106 40-50% NA NA Breast_cancer,CHD,CRC,HCC,Normal NA NA boxplot FRG1DP FSHD region gene 1 family member D, pseudogene chr20 29080390 29102761 + 22372 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FRG1DP NA 0.118 40-50% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot OVCH1-AS1 OVCH1 antisense RNA 1 chr12 29389294 29487488 + 98195 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=OVCH1-AS1 NA 0.447 10-20% Testis 3.090210284 Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up) NA boxplot AC007879.1 NA chr2 207173634 207222790 + 49157 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC007879.1 NA 0.012 70-80% Testis 4.906892038 Normal NA NA boxplot RP5-1119A7.17 NA chr22 36560870 36562915 - 2046 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-1119A7.17 NA 0.012 90-100% Brain 4.210868324 Breast_cancer,HCC NA NA boxplot SNHG7 small nucleolar RNA host gene 7 chr9 136721366 136728184 - 6819 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SNHG7 NA 0.988 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-166B2.8 NA chr16 11851649 11895611 + 43963 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-166B2.8 exo_circ_057318 0.165 30-40% NA NA CRC,Normal,PAAD NA NA boxplot CTD-2083E4.7 NA chr5 195778 196341 + 564 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2083E4.7 NA 0.012 20-30% NA NA Breast_cancer,PAAD NA NA boxplot CYP4F32P NA chr2 94759259 94760279 - 1021 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CYP4F32P NA 0.012 80-90% Testis 3.703587787 Breast_cancer NA NA boxplot AC092162.1 NA chr2 176724268 176819310 - 95043 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC092162.1 NA 0.024 10-20% Uterus 3.024518609 HCC,PAAD NA NA boxplot LINC00471 long intergenic non-protein coding RNA 471 chr2 231508426 231514339 - 5914 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00471 NA 0.247 40-50% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot CTD-2008P7.10 NA chr17 28219285 28220005 + 721 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2008P7.10 NA 0.012 20-30% NA NA NA NA NA boxplot RP11-560B16.5 NA chr11 6843664 6844666 - 1003 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-560B16.5 NA 0.012 90-100% Testis 4.906892038 Breast_cancer NA NA boxplot RP11-111F5.3 NA chr9 62349941 62351536 - 1596 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-111F5.3 NA 0.141 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-395N3.1 NA chr2 226804036 226805061 + 1026 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-395N3.1 NA 0.012 80-90% NA NA Normal NA NA boxplot AP000688.29 NA chr21 36104881 36109690 + 4810 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AP000688.29 NA 0.012 70-80% Kidney 1.281533823 HCC NA NA boxplot CTD-2531D15.4 NA chr11 62421845 62426724 - 4880 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2531D15.4 NA 0.071 60-70% Lung 1.465145362 CRC,HCC,Normal NA NA boxplot RP11-640N20.4 NA chr17 32051030 32053208 + 2179 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-640N20.4 NA 0.118 80-90% NA NA CRC,HCC,Normal,PAAD NA NA boxplot C10orf126 chromosome 10 open reading frame 126 chr10 28846408 28881898 + 35491 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=C10orf126 NA 0.047 60-70% Testis 3.553840521 Breast_cancer,HCC,Normal NA NA boxplot RP11-594N15.3 NA chr8 78605952 78609705 + 3754 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-594N15.3 NA 0.588 20-30% Muscle 2.195768359 CRC,HCC,Normal,PAAD NA NA boxplot RP11-799N11.1 NA chr17 10383132 10537862 + 154731 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-799N11.1 NA 0.012 90-100% Testis 4.906892038 HCC NA NA boxplot RP11-264B17.2 NA chr16 28956687 28966883 - 10197 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-264B17.2 NA 0.176 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CH17-264L24.1 NA chr22 22264601 22273020 + 8420 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CH17-264L24.1 NA 0.094 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-727F15.11 NA chr11 62771120 62771606 - 487 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-727F15.11 NA 0.047 60-70% NA NA HCC,Normal NA NA boxplot LINC01003 long intergenic non-protein coding RNA 1003 chr7 152463786 152465549 + 1764 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01003 NA 0.906 0-10% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot RPL7P18 ribosomal protein L7 pseudogene 18 chr5 94825961 94826694 - 734 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL7P18 NA 0.224 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-264E20.2 NA chr11 128614340 128615236 - 897 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-264E20.2 NA 0.059 90-100% NA NA Breast_cancer,HCC,Normal NA NA boxplot RP11-81A1.6 NA chr15 79920195 79922455 - 2261 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-81A1.6 NA 0.729 10-20% NA NA CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-138I1.3 NA chr17 16440479 16440952 - 474 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-138I1.3 NA 0.024 70-80% NA NA Breast_cancer,Normal NA NA boxplot RP11-327J17.9 NA chr15 96139472 96140452 - 981 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-327J17.9 NA 0.035 60-70% NA NA HCC NA NA boxplot AC090804.1 NA chr11 3892398 3892887 - 490 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC090804.1 NA 0.012 0-10% NA NA Normal NA NA boxplot AC073551.1 NA chr2 156033247 156034080 - 834 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC073551.1 NA 0.024 50-60% NA NA PAAD NA NA boxplot TDGF1P4 teratocarcinoma-derived growth factor 1 pseudogene 4 chr6 3941282 3941801 + 520 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TDGF1P4 NA 0.035 70-80% NA NA HCC,Normal NA NA boxplot RP4-536B24.4 NA chr16 87773488 87779374 - 5887 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-536B24.4 NA 0.024 80-90% Testis 4.818289501 Breast_cancer,CRC,Normal NA NA boxplot RP11-295D4.4 NA chr16 4426902 4427380 + 479 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-295D4.4 NA 0.024 30-40% NA NA Breast_cancer,Normal,PAAD NA NA boxplot H19 H19, imprinted maternally expressed transcript (non-protein coding) chr11 1995163 2001470 - 6308 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=H19 NA 1 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up),CRC(down) Yes boxplot RP11-761N21.1 NA chr3 40766207 40862626 + 96420 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-761N21.1 NA 0.012 90-100% NA NA CRC NA NA boxplot CTC-297N7.10 NA chr17 10680734 10683988 + 3255 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-297N7.10 NA 0.035 70-80% NA NA CRC,PAAD NA NA boxplot RP5-912I13.2 NA chr7 155474256 155644406 - 170151 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-912I13.2 NA 0.741 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-158M2.2 NA chr15 85726115 85727227 - 1113 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-158M2.2 NA 0.424 70-80% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-347I19.8 NA chr12 121797511 121801972 + 4462 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-347I19.8 NA 0.047 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RPL32P34 ribosomal protein L32 pseudogene 34 chr19 5277734 5278133 + 400 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL32P34 NA 0.012 90-100% NA NA CRC NA NA boxplot RP11-384P7.7 NA chr9 33697459 33700986 + 3528 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-384P7.7 NA 0.6 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-452L6.7 NA chr16 31508471 31509256 + 786 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-452L6.7 NA 0.118 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot LSM12P1 LSM12 pseudogene 1 chr8 35525176 35525763 - 588 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LSM12P1 NA 0.988 0-10% NA NA CHD,CRC,HCC,Normal,PAAD CHD(down) NA boxplot LINC01291 long intergenic non-protein coding RNA 1291 chr2 74918148 74938418 + 20271 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01291 NA 0.2 0-10% NA NA Breast_cancer,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot LINC00687 long intergenic non-protein coding RNA 687 chr20 11800463 11870715 - 70253 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00687 NA 0.012 80-90% Testis 4.906892038 NA NA NA boxplot MAST4-IT1 MAST4 intronic transcript 1 chr5 66662331 66662988 + 658 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MAST4-IT1 exo_circ_049583,exo_circ_037119,exo_circ_052717,exo_circ_044304,exo_circ_017580,exo_circ_044306 0.012 70-80% NA NA NA NA NA boxplot RP1-68D18.2 NA chr11 35212550 35214007 + 1458 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-68D18.2 NA 0.176 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot ZNF849P zinc finger protein 849, pseudogene chr19 22685167 22686732 + 1566 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ZNF849P NA 0.047 90-100% Testis 2.915823563 Breast_cancer,Normal,PAAD NA NA boxplot RP11-744I24.2 NA chr7 141529203 141551304 - 22102 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-744I24.2 NA 0.024 70-80% Testis 4.348796444 CRC NA NA boxplot LINC00276 long intergenic non-protein coding RNA 276 chr2 13710531 14400963 - 690433 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00276 NA 0.024 80-90% NA NA HCC,Normal NA NA boxplot ZNF70P1 zinc finger protein 70 pseudogene 1 chr6 33215705 33216328 + 624 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ZNF70P1 NA 0.012 90-100% NA NA NA NA NA boxplot RP11-138J23.1 NA chr5 104079911 104105403 + 25493 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-138J23.1 exo_circ_054708 0.071 50-60% NA NA HCC,Normal,PAAD NA NA boxplot RP11-727A23.1 NA chr11 83213005 83213404 + 400 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-727A23.1 NA 0.412 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP5-921G16.1 NA chr7 124032205 124395118 + 362914 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-921G16.1 NA 0.035 40-50% Brain 2.789895591 Normal NA NA boxplot C4BPAP1 complement component 4 binding protein, alpha pseudogene 1 chr1 207165496 207183910 + 18415 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=C4BPAP1 NA 0.012 90-100% Testis 4.030545372 NA NA NA boxplot WI2-89031B12.1 NA chrX 154517840 154518631 - 792 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=WI2-89031B12.1 NA 0.024 30-40% NA NA Normal NA NA boxplot RP11-71E19.1 NA chr3 126266796 126291279 + 24484 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-71E19.1 NA 0.024 80-90% NA NA Breast_cancer,HCC NA NA boxplot AC005932.1 NA chr19 18940322 18946831 + 6510 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC005932.1 NA 0.141 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot UBTFL3 upstream binding transcription factor, RNA polymerase I-like 3 (pseudogene) chr2 95625213 95626236 + 1024 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=UBTFL3 NA 0.012 80-90% NA NA Normal NA NA boxplot CTSL3P cathepsin L family member 3, pseudogene chr9 87772453 87786884 + 14432 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTSL3P NA 0.024 10-20% Kidney 4.269632395 Breast_cancer,Normal NA NA boxplot LINC00385 long intergenic non-protein coding RNA 385 chr13 30154066 30154586 + 521 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00385 NA 0.024 70-80% NA NA Normal NA NA boxplot RP4-620E11.8 NA chr20 41485571 41486225 - 655 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-620E11.8 NA 0.082 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP4-591L5.1 NA chr1 30409560 30411638 - 2079 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-591L5.1 NA 0.012 30-40% Testis 4.906892038 Breast_cancer,Normal NA NA boxplot RP11-1391J7.1 NA chr11 856880 859795 - 2916 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1391J7.1 NA 0.047 60-70% NA NA Breast_cancer,CRC,Normal,PAAD NA NA boxplot RP4-687K1.2 NA chr14 73189763 73190004 + 242 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-687K1.2 NA 0.035 30-40% NA NA CRC,Normal NA NA boxplot LINC00467 long intergenic non-protein coding RNA 467 chr1 211382803 211435333 + 52531 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00467 exo_circ_031448,exo_circ_020590 0.941 0-10% Testis 3.409862262 Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down) NA boxplot CEP164P1 centrosomal protein 164kDa pseudogene 1 chr10 45002222 45076066 - 73845 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CEP164P1 NA 0.282 0-10% Testis 1.722567436 Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot TSPAN9-IT1 TSPAN9 intronic transcript 1 chr12 3149797 3151476 + 1680 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TSPAN9-IT1 NA 0.012 80-90% Brain 4.906892038 Normal NA NA boxplot AC009480.3 NA chr2 147899401 147902956 - 3556 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC009480.3 exo_circ_053521,exo_circ_047166,exo_circ_048503,exo_circ_032706,exo_circ_030468 0.553 0-10% Testis 4.906892038 CRC,HCC,Normal,PAAD CHD(down),HCC(up),PAAD(up) NA boxplot RASSF1-AS1 RASSF1 antisense RNA 1 chr3 50337511 50338300 + 790 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RASSF1-AS1 NA 0.506 50-60% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA Yes boxplot RP1-20B21.4 NA chr1 17406760 17407382 + 623 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-20B21.4 NA 0.471 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-69M1.1 NA chr12 7994770 7995084 - 315 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-69M1.1 NA 0.012 70-80% NA NA HCC NA NA boxplot RP11-517H2.6 NA chr6 166999405 167139141 + 139737 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-517H2.6 NA 0.929 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-317N8.5 NA chr14 35819224 35826765 - 7542 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-317N8.5 NA 0.153 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot ENTPD3-AS1 ENTPD3 antisense RNA 1 chr3 40313802 40453329 - 139528 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ENTPD3-AS1 NA 0.647 10-20% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(down),PAAD(down) NA boxplot RP11-133K1.12 NA chr15 40285468 40285909 - 442 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-133K1.12 NA 0.376 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-87C12.5 NA chr12 122007434 122020063 - 12630 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-87C12.5 NA 0.235 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-787I22.3 NA chr6 108998482 108999125 + 644 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-787I22.3 NA 0.118 60-70% NA NA Breast_cancer,CRC,Normal NA NA boxplot DIO3OS DIO3 opposite strand/antisense RNA (head to head) chr14 101552221 101560431 - 8211 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DIO3OS NA 0.059 40-50% NA NA Breast_cancer,PAAD NA NA boxplot RP11-194N12.2 NA chr17 42495867 42496550 + 684 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-194N12.2 NA 0.047 70-80% NA NA CRC,Normal,PAAD NA NA boxplot CTD-2337A12.1 NA chr5 95962001 96631085 + 669085 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2337A12.1 NA 0.306 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-1079K10.2 NA chr17 49375380 49380094 + 4715 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1079K10.2 NA 0.188 30-40% NA NA Breast_cancer,CRC,Normal,PAAD NA NA boxplot RP4-665J23.1 NA chr1 90782983 90851657 - 68675 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-665J23.1 NA 0.435 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-356K23.1 NA chr14 89350285 89364699 + 14415 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-356K23.1 NA 0.024 70-80% Fallopian Tube 1.638467538 CRC,Normal NA NA boxplot AC017060.1 NA chr7 17405479 17558909 - 153431 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC017060.1 NA 0.176 10-20% NA NA CRC,HCC,Normal,PAAD NA NA boxplot FAM90A20P putative protein FAM90A20 chr8 7295014 7298024 + 3011 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FAM90A20P NA 0.012 40-50% NA NA Breast_cancer,Normal NA NA boxplot RPL36AP21 ribosomal protein L36a pseudogene 21 chr5 18049550 18049872 + 323 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL36AP21 NA 0.094 90-100% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-452G18.2 NA chr11 17228279 17229151 + 873 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-452G18.2 NA 0.129 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP4-536B24.2 NA chr16 87836532 87837663 + 1132 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-536B24.2 NA 0.094 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot C1GALT1P1 core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 pseudogene 1 chr12 69284397 69285485 + 1089 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=C1GALT1P1 NA 0.059 30-40% NA NA CRC,Normal,PAAD NA NA boxplot HECW1-IT1 HECW1 intronic transcript 1 chr7 43117896 43163187 + 45292 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HECW1-IT1 NA 0.024 20-30% Testis 4.842141937 Breast_cancer,PAAD NA NA boxplot RPL35P1 ribosomal protein L35 pseudogene 1 chr1 236981339 236981708 + 370 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL35P1 NA 0.024 90-100% NA NA CHD,HCC,Normal NA NA boxplot RP3-467D16.3 NA chr6 16259101 16264553 - 5453 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-467D16.3 exo_circ_049774 0.4 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot AC005154.8 NA chr7 30544053 30544431 + 379 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC005154.8 NA 0.024 60-70% NA NA HCC NA NA boxplot WASH6P WAS protein family homolog 6 pseudogene chrY 57207346 57212230 + 4885 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=WASH6P NA 0.929 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up),CRC(up),HCC(up),PAAD(up) NA boxplot RP11-445F6.2 NA chr6 139271362 139287307 + 15946 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-445F6.2 NA 0.506 20-30% Spleen 2.241572474 CRC,HCC,Normal,PAAD NA NA boxplot RP11-639F1.3 NA chr3 155431229 155433398 - 2170 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-639F1.3 NA 0.012 90-100% NA NA Breast_cancer NA NA boxplot RP4-737E23.6 NA chr20 23071547 23072722 - 1176 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-737E23.6 exo_circ_029019 0.071 40-50% NA NA CRC,HCC,Normal NA NA boxplot DNAJB8-AS1 DNAJB8 antisense RNA 1 chr3 128463594 128472317 + 8724 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DNAJB8-AS1 NA 0.012 70-80% Testis 4.906892038 Breast_cancer NA NA boxplot CTA-268H5.12 NA chr22 45178990 45179310 + 321 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTA-268H5.12 NA 0.071 70-80% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP13-820C6.2 NA chr12 132077803 132080460 - 2658 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP13-820C6.2 NA 0.2 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot AC080125.1 NA chr2 185547135 185547818 - 684 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC080125.1 NA 0.047 80-90% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot CTD-2576D5.1 NA chr16 17082295 17085049 - 2755 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2576D5.1 NA 0.024 80-90% NA NA CRC,Normal NA NA boxplot RP11-342K6.4 NA chr2 75719120 75720018 + 899 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-342K6.4 NA 0.024 80-90% NA NA HCC,PAAD NA NA boxplot RP11-369E15.2 NA chr8 20954012 20968904 + 14893 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-369E15.2 NA 0.012 80-90% Testis 4.906892038 Normal NA NA boxplot LINC01073 NA chr13 31985685 31990997 + 5313 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01073 NA 0.047 80-90% NA NA CRC,Normal NA NA boxplot RP11-216B9.6 NA chr9 128528901 128552410 - 23510 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-216B9.6 exo_circ_022357 0.388 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP5-1154L15.2 NA chr12 585865 586486 - 622 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-1154L15.2 NA 0.188 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot FMO6P flavin containing monooxygenase 6 pseudogene chr1 171137740 171161568 + 23829 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FMO6P NA 0.012 90-100% NA NA Breast_cancer NA NA boxplot AC008277.1 NA chr2 159386367 159404636 + 18270 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC008277.1 NA 0.024 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-456K23.1 NA chr18 44676927 44679717 - 2791 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-456K23.1 NA 0.553 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot UNC5B-AS1 UNC5B antisense RNA 1 chr10 71217224 71218228 - 1005 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=UNC5B-AS1 NA 0.071 60-70% Heart 1.098887667 Breast_cancer,HCC,Normal,PAAD NA NA boxplot RP11-61O1.2 NA chr14 98136074 98139242 + 3169 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-61O1.2 NA 0.329 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot LINC01028 long intergenic non-protein coding RNA 1028 chr17 70051277 70068095 + 16819 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01028 NA 0.012 80-90% Nerve 3.376617144 PAAD NA NA boxplot RP11-368P15.3 NA chr14 53036755 53038251 + 1497 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-368P15.3 NA 0.047 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-11M20.2 NA chr20 62037429 62037956 - 528 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-11M20.2 NA 0.047 60-70% NA NA CRC,HCC NA NA boxplot ITFG1-AS1 ITFG1 antisense RNA 1 chr16 47144323 47162747 + 18425 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ITFG1-AS1 NA 0.082 80-90% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot RP11-632K20.8 NA chr15 32461666 32461809 - 144 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-632K20.8 NA 0.659 20-30% NA NA CRC,HCC,Normal,PAAD HCC(up),PAAD(up) NA boxplot RP11-115H15.2 NA chr12 116174502 116181295 - 6794 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-115H15.2 exo_circ_025951,exo_circ_056501,exo_circ_045391,exo_circ_039801 0.082 60-70% Brain 4.906892038 Breast_cancer,CRC,HCC,Normal NA NA boxplot ZNF355P zinc finger protein 355, pseudogene chr21 13095305 13113790 - 18486 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ZNF355P NA 0.012 90-100% Cervix 4.906892038 Normal NA NA boxplot AC002310.17 NA chr16 30587662 30587920 - 259 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC002310.17 NA 0.012 80-90% NA NA NA NA NA boxplot ENO1-IT1 ENO1 intronic transcript 1 chr1 8875788 8878007 - 2220 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ENO1-IT1 NA 0.082 40-50% NA NA Breast_cancer,CRC,Normal NA NA boxplot RP1-240K6.3 NA chr14 73462423 73477175 + 14753 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-240K6.3 NA 0.553 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot FLJ12825 uncharacterized LOC440101 chr12 54058254 54122234 + 63981 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FLJ12825 NA 0.035 10-20% NA NA Breast_cancer,HCC,PAAD NA NA boxplot RP11-779P15.2 NA chr3 99507187 99527113 - 19927 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-779P15.2 NA 0.012 80-90% Testis 3.653543148 CRC,PAAD NA NA boxplot AC007091.1 NA chr7 19353534 19578606 + 225073 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC007091.1 exo_circ_039160 0.082 60-70% Testis 3.863231615 Breast_cancer,CRC,HCC,Normal NA NA boxplot AP001347.6 NA chr21 14027421 14144468 + 117048 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AP001347.6 NA 0.188 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot TAPT1-AS1 TAPT1 antisense RNA 1 (head to head) chr4 16226685 16320140 + 93456 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TAPT1-AS1 exo_circ_030999,exo_circ_033152,exo_circ_030528,exo_circ_038694,exo_circ_054521,exo_circ_024670 0.882 0-10% NA NA CHD,CRC,HCC,Normal,PAAD CHD(down),CRC(down) NA boxplot IMP3P2 IMP3 pseudogene 2 chr7 128693450 128693924 + 475 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=IMP3P2 NA 0.012 90-100% NA NA Breast_cancer NA NA boxplot FTH1P15 ferritin, heavy polypeptide 1 pseudogene 15 chr6 57004520 57004799 + 280 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FTH1P15 NA 0.059 60-70% Brain 4.906892038 CRC,HCC,Normal,PAAD NA NA boxplot RP11-523H20.3 NA chr2 74501717 74502365 + 649 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-523H20.3 NA 0.035 70-80% NA NA Breast_cancer,CRC,Normal NA NA boxplot RP11-212P7.2 NA chr7 128524016 128531069 - 7054 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-212P7.2 NA 0.706 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-413N19.2 NA chr13 42339188 42485956 + 146769 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-413N19.2 exo_circ_026775 0.129 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-281A20.2 NA chr9 117783448 117868071 + 84624 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-281A20.2 exo_circ_050324 0.059 50-60% Spleen 2.090593002 CRC,Normal,PAAD NA NA boxplot XX-FW83128A1.2 NA chrX 154333960 154335037 - 1078 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=XX-FW83128A1.2 NA 0.153 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-110I1.5 NA chr11 119005727 119005934 - 208 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-110I1.5 NA 0.012 80-90% NA NA CRC NA NA boxplot RP4-545L17.12 NA chr20 1186092 1207036 + 20945 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-545L17.12 NA 0.059 70-80% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-3J1.1 NA chr4 19172335 19456994 - 284660 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-3J1.1 NA 0.012 90-100% Testis 4.906892038 Breast_cancer NA NA boxplot LINC01336 long intergenic non-protein coding RNA 1336 chr5 75047719 75052843 - 5125 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01336 exo_circ_033346 0.271 50-60% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RPS6KA2-IT1 RPS6KA2 intronic transcript 1 chr6 166460663 166465383 - 4721 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPS6KA2-IT1 NA 0.024 10-20% NA NA Breast_cancer,PAAD NA NA boxplot MGC27382 uncharacterized MGC27382 chr1 78229599 78369464 + 139866 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MGC27382 exo_circ_015744 0.118 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RPS13P2 ribosomal protein S13 pseudogene 2 chr1 52772194 52772648 - 455 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPS13P2 NA 1 0-10% NA NA CHD,CRC,HCC,Normal,PAAD PAAD(down) NA boxplot AC007394.3 NA chr2 149439897 149440427 + 531 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC007394.3 NA 0.024 10-20% Testis 4.906892038 PAAD NA NA boxplot RP11-82L18.2 NA chr9 89088604 89109934 - 21331 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-82L18.2 NA 0.082 10-20% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot TRAF6P1 TNF receptor associated factor 6 pseudogene 1 chr10 59136625 59138182 - 1558 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TRAF6P1 NA 0.012 90-100% Testis 4.906892038 HCC,Normal NA NA boxplot HOXB-AS1 HOXB cluster antisense RNA 1 chr17 48543551 48551250 + 7700 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HOXB-AS1 exo_circ_034604 0.435 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-1094M14.7 NA chr17 35459481 35460550 - 1070 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1094M14.7 NA 0.2 70-80% Spleen 1.745473037 Breast_cancer,CRC,HCC,Normal NA NA boxplot RP1-155D22.2 NA chr6 164084023 164085661 - 1639 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-155D22.2 NA 0.012 20-30% Testis 4.792265908 Breast_cancer,HCC NA NA boxplot RP11-527L4.9 NA chr17 43922775 43927388 - 4614 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-527L4.9 NA 0.012 90-100% NA NA Breast_cancer,PAAD NA NA boxplot AC068522.4 NA chr8 58588420 58588764 - 345 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC068522.4 NA 0.271 80-90% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-177G23.2 NA chr6 79561132 79561602 + 471 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-177G23.2 NA 0.071 30-40% NA NA CRC,Normal NA NA boxplot LINC01012 long intergenic non-protein coding RNA 1012 chr6 27694035 27710222 + 16188 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01012 exo_circ_042345 0.2 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot SAGE4P sarcoma antigen 4, pseudogene chrX 135598927 135615431 + 16505 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SAGE4P NA 0.012 50-60% NA NA Breast_cancer,CRC NA NA boxplot AC007036.6 NA chr7 30176387 30179014 - 2628 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC007036.6 NA 0.071 50-60% Adrenal Gland 1.034773606 CRC,Normal NA NA boxplot RP11-53I6.1 NA chr18 32075885 32076272 - 388 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-53I6.1 NA 0.012 20-30% NA NA Normal NA NA boxplot RP11-75C10.6 NA chr17 77444704 77447167 + 2464 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-75C10.6 NA 0.212 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot ZNF346-IT1 ZNF346 intronic transcript 1 chr5 177051714 177052963 + 1250 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ZNF346-IT1 NA 0.165 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-128A17.1 NA chr15 37099339 37100173 + 835 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-128A17.1 NA 0.071 40-50% NA NA CRC,HCC,PAAD NA NA boxplot CTD-2377O17.1 NA chr5 74865893 74867854 + 1962 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2377O17.1 NA 0.059 80-90% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot LINC01451 long intergenic non-protein coding RNA 1451 chr9 136612024 136617181 - 5158 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01451 NA 0.082 70-80% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot FAM222A-AS1 FAM222A antisense RNA 1 chr12 109734166 109773508 - 39343 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FAM222A-AS1 NA 0.024 90-100% Testis 2.78221561 Breast_cancer,HCC,PAAD NA NA boxplot AP000253.1 NA chr21 31653593 31659500 - 5908 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AP000253.1 NA 0.047 50-60% Testis 1.315921189 Breast_cancer,CRC,HCC,Normal NA NA boxplot CTD-2050B12.1 NA chr16 56183726 56186306 - 2581 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2050B12.1 NA 0.024 10-20% Testis 4.781009978 CRC,PAAD NA NA boxplot IQCA1-AS1 NA chr2 236391074 236392388 + 1315 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=IQCA1-AS1 NA 0.012 30-40% NA NA NA NA NA boxplot CTC-429L19.3 NA chr19 10490339 10491000 - 662 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-429L19.3 NA 0.012 90-100% NA NA Breast_cancer NA NA boxplot KB-1991G8.1 NA chr8 100337595 100350707 + 13113 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KB-1991G8.1 NA 0.024 30-40% Skin 1.524883118 Normal NA NA boxplot RP3-424M6.4 NA chr12 110501614 110503441 + 1828 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-424M6.4 NA 0.341 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-104G3.7 NA chr9 39873931 39874390 - 460 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-104G3.7 NA 0.4 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CTD-2031P19.4 NA chr5 55944656 55944733 + 78 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2031P19.4 NA 0.929 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(up),HCC(up),PAAD(up) NA boxplot RP11-159F24.3 NA chr5 43483959 43509356 + 25398 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-159F24.3 NA 0.141 80-90% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RPS15AP36 ribosomal protein S15a pseudogene 36 chr19 58216180 58216561 + 382 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPS15AP36 NA 0.012 80-90% NA NA Breast_cancer,CRC NA NA boxplot DPH6-AS1 DPH6 antisense RNA 1 (head to head) chr15 35546195 35859001 + 312807 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DPH6-AS1 NA 0.153 20-30% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-133L14.5 NA chr12 10015240 10030606 - 15367 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-133L14.5 NA 0.012 80-90% Testis 4.859317359 Normal,PAAD NA NA boxplot RP11-70D24.2 NA chr16 79605802 79606605 + 804 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-70D24.2 NA 0.059 50-60% NA NA CRC,HCC,Normal NA NA boxplot CTD-2013N24.2 NA chr3 69013941 69056622 + 42682 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2013N24.2 NA 0.694 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot RP11-206L10.8 NA chr1 800879 817712 - 16834 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-206L10.8 NA 0.929 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),PAAD(down) NA boxplot RP11-775J23.2 NA chr3 125344085 125344797 - 713 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-775J23.2 NA 0.129 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot MRPS17P1 mitochondrial ribosomal protein S17 pseudogene 1 chr1 44988705 44991834 - 3130 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MRPS17P1 NA 0.012 60-70% Testis 1.377037573 NA NA NA boxplot TUBB4BP2 tubulin beta 4B class IVb pseudogene 2 chr9 34109171 34109968 - 798 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TUBB4BP2 NA 0.047 70-80% Testis 4.906892038 Breast_cancer,CRC,Normal NA NA boxplot CTD-2298J14.2 NA chr14 41587861 41604856 - 16996 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2298J14.2 NA 0.024 90-100% NA NA Breast_cancer,CRC,Normal NA NA boxplot RP11-571I18.5 NA chr4 54059597 54061210 + 1614 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-571I18.5 NA 0.012 90-100% NA NA Breast_cancer,Normal NA NA boxplot RP11-426C22.5 NA chr16 29116127 29217860 + 101734 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-426C22.5 NA 0.647 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(up),HCC(down),PAAD(down) NA boxplot RP11-49G2.4 NA chr12 22116629 22134851 - 18223 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-49G2.4 NA 0.012 30-40% NA NA CRC NA NA boxplot MAP2K1P1 mitogen-activated protein kinase kinase 1 pseudogene 1 chr8 30027713 30028900 + 1188 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MAP2K1P1 NA 0.2 90-100% Testis 4.82709666 Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP13-33H18.1 NA chrX 74069276 74070832 + 1557 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP13-33H18.1 NA 0.188 60-70% NA NA CRC,Normal,PAAD NA NA boxplot CTC-340I23.2 NA chr5 156704058 156739812 - 35755 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-340I23.2 NA 0.012 80-90% Testis 3.93399498 CRC NA NA boxplot MIR3179-3 microRNA 3179-3 chr16 18411894 18411977 - 84 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MIR3179-3 NA 0.024 80-90% NA NA PAAD NA NA boxplot FOXP4-AS1 FOXP4 antisense RNA 1 chr6 41494853 41548621 - 53769 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FOXP4-AS1 NA 0.071 40-50% NA NA Breast_cancer,CHD,HCC,Normal,PAAD NA NA boxplot RP11-438L7.3 NA chr12 8634367 8637608 + 3242 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-438L7.3 NA 0.118 80-90% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot AJ003147.8 NA chr16 3181233 3184018 - 2786 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AJ003147.8 NA 0.012 80-90% Brain 4.906892038 CRC NA NA boxplot RP11-3L21.2 NA chr1 224717504 224730662 - 13159 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-3L21.2 NA 0.024 90-100% NA NA Breast_cancer,HCC NA NA boxplot RP11-757O6.6 NA chr18 14253548 14254075 + 528 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-757O6.6 NA 0.071 70-80% NA NA Breast_cancer,CRC,Normal,PAAD NA NA boxplot VN1R48P vomeronasal 1 receptor 48 pseudogene chr9 38504447 38505482 - 1036 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=VN1R48P NA 0.012 90-100% Testis 2.23747865 CRC NA NA boxplot AC007879.2 NA chr2 207186717 207236066 - 49350 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC007879.2 NA 0.353 40-50% Testis 2.068089668 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CTD-2047H16.5 NA chr17 80333841 80334366 - 526 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2047H16.5 NA 0.188 70-80% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP5-1092A3.4 NA chr1 28239509 28241453 - 1945 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-1092A3.4 NA 0.165 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot TNPO1P1 transportin 1 pseudogene 1 chr10 84390908 84392045 + 1138 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TNPO1P1 NA 0.141 30-40% Testis 1.024543932 CRC,HCC,Normal,PAAD NA NA boxplot SLC25A5-AS1 SLC25A5 antisense RNA 1 chrX 119466034 119469098 - 3065 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SLC25A5-AS1 NA 0.588 20-30% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-229O3.1 NA chr16 64981123 64983227 - 2105 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-229O3.1 NA 0.012 70-80% NA NA HCC NA NA boxplot CTC-467M3.1 NA chr5 88676218 88722831 + 46614 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-467M3.1 NA 0.259 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot ZBED5-AS1 ZBED5 antisense RNA 1 chr11 10858259 10906802 + 48544 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ZBED5-AS1 NA 0.988 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-681B3.4 NA chr18 14225224 14342505 + 117282 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-681B3.4 NA 0.271 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-8P13.5 NA chr12 32820142 32820567 - 426 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-8P13.5 NA 0.012 40-50% NA NA Normal NA NA boxplot EEF1A1P12 eukaryotic translation elongation factor 1 alpha 1 pseudogene 12 chr2 106697331 106698676 - 1346 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=EEF1A1P12 NA 0.753 70-80% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-550F7.1 NA chr3 76434018 76435428 + 1411 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-550F7.1 NA 0.329 90-100% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CENPUP1 centromere protein U pseudogene 1 chr11 13756027 13757560 + 1534 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CENPUP1 NA 0.024 10-20% NA NA Breast_cancer,PAAD NA NA boxplot RP11-404K5.2 NA chr5 7299774 7306592 - 6819 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-404K5.2 NA 0.012 90-100% Testis 4.904212598 Breast_cancer,CRC NA NA boxplot AC007000.10 NA chr7 77071751 77072237 - 487 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC007000.10 NA 0.071 80-90% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-849N15.3 NA chr17 15260513 15261841 + 1329 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-849N15.3 NA 0.047 60-70% NA NA Breast_cancer,HCC,Normal NA NA boxplot CTB-193M12.5 NA chr16 15701237 15702118 + 882 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTB-193M12.5 NA 0.871 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down) NA boxplot LINC01127 long intergenic non-protein coding RNA 1127 chr2 101962056 101987167 + 25112 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01127 NA 0.518 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up) NA boxplot HNRNPLP2 heterogeneous nuclear ribonucleoprotein L pseudogene 2 chr15 34489002 34490571 - 1570 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HNRNPLP2 NA 1 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down) NA boxplot ABCA11P ATP binding cassette subfamily A member 11, pseudogene chr4 425435 474129 - 48695 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ABCA11P NA 0.953 10-20% NA NA CHD,CRC,HCC,Normal,PAAD CHD(up) NA boxplot RPL7AP66 ribosomal protein L7a pseudogene 66 chr18 39334872 39335672 - 801 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL7AP66 exo_circ_057757,exo_circ_005557,exo_circ_057758,exo_circ_021260,exo_circ_057759,exo_circ_052032,exo_circ_046780,exo_circ_052029,exo_circ_052030 1 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up),CRC(up),HCC(up),PAAD(up) NA boxplot RP11-572M11.4 NA chr3 113019532 113183301 + 163770 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-572M11.4 NA 0.494 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-621H8.2 NA chr15 79559256 79560304 - 1049 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-621H8.2 NA 0.047 70-80% NA NA Breast_cancer,CRC,Normal,PAAD NA NA boxplot LINC01315 long intergenic non-protein coding RNA 1315 chr22 42364400 42369236 - 4837 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01315 NA 0.118 70-80% NA NA CRC,HCC,Normal,PAAD NA NA boxplot AGAP10P ArfGAP with GTPase domain, ankyrin repeat and PH domain 10 pseudogene chr10 45678692 45700532 + 21841 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AGAP10P NA 0.565 50-60% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot LINC01117 long intergenic non-protein coding RNA 1117 chr2 176637710 176655958 + 18249 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01117 NA 0.176 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot LINC00654 long intergenic non-protein coding RNA 654 chr20 5496067 5504613 - 8547 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00654 NA 0.788 10-20% Testis 1.232147932 Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP13-884E18.2 NA chr4 137645265 137655174 - 9910 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP13-884E18.2 NA 0.024 80-90% NA NA CRC,HCC NA NA boxplot LL22NC03-86G7.1 NA chr22 21938293 21977632 + 39340 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LL22NC03-86G7.1 NA 0.835 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot RP11-486F17.1 NA chr2 199325310 199329362 + 4053 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-486F17.1 NA 0.035 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-342I1.2 NA chr4 139556799 139557643 + 845 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-342I1.2 NA 0.106 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC098820.2 NA chr2 216385288 216412696 - 27409 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC098820.2 NA 0.012 20-30% Testis 4.191044133 HCC NA NA boxplot RP11-867G23.2 NA chr11 66267635 66268129 - 495 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-867G23.2 NA 0.012 90-100% Testis 4.906892038 CRC,HCC,Normal NA NA boxplot FAM133CP family with sequence similarity 133, member A pseudogene chr10 58715554 58716257 + 704 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FAM133CP NA 0.882 20-30% NA NA CHD,CRC,HCC,Normal,PAAD PAAD(up) NA boxplot RP11-499P1.2 NA chr2 230924567 230929919 + 5353 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-499P1.2 NA 0.576 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),HCC(down) NA boxplot RP11-478K15.7 NA chr13 44196006 44197298 + 1293 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-478K15.7 NA 0.012 70-80% NA NA Breast_cancer NA NA boxplot RP11-54C4.3 NA chr5 151770242 151771508 - 1267 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-54C4.3 NA 0.624 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-848G14.5 NA chr5 69631963 69636399 + 4437 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-848G14.5 NA 0.788 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(up),PAAD(up) NA boxplot RP11-762H8.4 NA chr15 78280950 78282190 - 1241 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-762H8.4 NA 0.188 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-578F21.4 NA chr15 28553638 28561379 + 7742 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-578F21.4 NA 0.047 40-50% Testis 4.906892038 Breast_cancer,HCC,PAAD NA NA boxplot RP11-977G19.5 NA chr12 56162359 56190284 - 27926 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-977G19.5 NA 0.847 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot AC093642.3 NA chr2 241970683 241977276 + 6594 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC093642.3 NA 0.188 20-30% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot RP11-1260E13.1 NA chr17 321392 322453 + 1062 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1260E13.1 NA 0.059 60-70% Pituitary 1.668315413 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot ARRDC1-AS1 ARRDC1 antisense RNA 1 chr9 137615332 137618906 - 3575 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ARRDC1-AS1 NA 0.847 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-474C8.8 NA chr12 48152817 48153128 + 312 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-474C8.8 NA 0.012 80-90% NA NA PAAD NA NA boxplot RP11-252I14.1 NA chr5 180226378 180227000 - 623 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-252I14.1 NA 0.035 60-70% NA NA HCC,Normal,PAAD NA NA boxplot SSR4P1 signal sequence receptor, delta pseudogene 1 chr21 45070952 45074165 - 3214 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SSR4P1 NA 0.388 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC004947.2 NA chr7 26551822 26557200 + 5379 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC004947.2 NA 0.271 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC079753.5 NA chr2 112932625 112933171 + 547 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC079753.5 NA 0.012 80-90% Skin 4.481063644 NA NA NA boxplot NACAP1 nascent polypeptide associated complex alpha subunit pseudogene 1 chr8 101361794 101372707 + 10914 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NACAP1 NA 0.012 70-80% Testis 3.722988664 Breast_cancer,PAAD NA NA boxplot KB-1125A3.12 NA chr22 23865248 23873277 - 8030 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KB-1125A3.12 NA 0.024 70-80% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot RP11-96C23.13 NA chr10 86992406 87010203 + 17798 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-96C23.13 NA 0.388 70-80% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CYCSP10 cytochrome c, somatic pseudogene 10 chr3 10000647 10000940 - 294 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CYCSP10 NA 0.071 70-80% NA NA CRC,Normal NA NA boxplot LAMA5-AS1 LAMA5 antisense RNA 1 chr20 62352995 62356480 + 3486 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LAMA5-AS1 NA 0.071 90-100% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot RP11-128L5.1 NA chr8 141055290 141060596 + 5307 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-128L5.1 NA 0.024 30-40% NA NA Breast_cancer,CRC,HCC NA NA boxplot RP11-314N2.2 NA chr1 147840962 147842359 + 1398 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-314N2.2 NA 0.024 0-10% Kidney 3.836510606 Breast_cancer,Normal NA NA boxplot LRRC37A9P leucine-rich repeat containing 37 member A9, pseudogene chr17 35912635 35918010 - 5376 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LRRC37A9P NA 0.153 20-30% Testis 4.66422635 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CTD-2331H12.7 NA chr19 52923382 52924075 + 694 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2331H12.7 NA 0.106 80-90% NA NA HCC,Normal,PAAD NA NA boxplot TUBA3FP tubulin alpha 3f pseudogene chr22 21002895 21014292 - 11398 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TUBA3FP NA 0.282 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-62G11.1 NA chr3 69535664 69536693 - 1030 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-62G11.1 NA 0.035 70-80% Thyroid 4.906892038 Breast_cancer,CRC,Normal NA NA boxplot SBDSP1 Shwachman-Bodian-Diamond syndrome pseudogene 1 chr7 72829425 72836701 + 7277 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SBDSP1 exo_circ_041594,exo_circ_010414,exo_circ_019518 0.988 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down) NA boxplot AC068831.6 NA chr15 90952239 90955225 - 2987 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC068831.6 NA 0.271 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot PTPRD-AS1 PTPRD antisense RNA 1 chr9 8858130 8862255 + 4126 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PTPRD-AS1 NA 0.082 0-10% NA NA Breast_cancer,CHD,HCC,Normal CHD(up) NA boxplot AC147651.4 NA chr7 603185 608482 + 5298 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC147651.4 NA 0.918 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down) NA boxplot CTD-2095E4.5 NA chr17 32127595 32128454 + 860 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2095E4.5 NA 0.129 70-80% NA NA CRC,Normal,PAAD NA NA boxplot VLDLR-AS1 VLDLR antisense RNA 1 chr9 2422702 2643359 - 220658 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=VLDLR-AS1 exo_circ_050405 0.082 10-20% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot CRAT37 cervical cancer-associated transcript 37 chr15 91408708 91605211 + 196504 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CRAT37 NA 0.212 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CTD-3092A11.2 NA chr15 30487963 30490313 + 2351 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-3092A11.2 NA 0.929 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-781M16.1 NA chr4 158469586 158470702 + 1117 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-781M16.1 NA 0.012 0-10% NA NA PAAD NA NA boxplot RP11-479O16.1 NA chr5 58741581 58817099 - 75519 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-479O16.1 NA 0.318 20-30% Testis 3.906979869 Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-296O14.3 NA chr1 173417793 173461362 - 43570 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-296O14.3 exo_circ_052565,exo_circ_003089 0.718 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot L34079.4 NA chr19 43574638 43575618 + 981 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=L34079.4 NA 0.212 50-60% Pituitary 2.66295534 HCC,Normal,PAAD NA NA boxplot RP11-547D23.1 NA chr14 53153354 53157528 + 4175 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-547D23.1 exo_circ_013728 0.812 10-20% Testis 4.626498965 CRC,HCC,Normal,PAAD CHD(down) NA boxplot TCEAL3-AS1 TCEAL3 antisense RNA 1 chrX 103626076 103626492 - 417 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TCEAL3-AS1 NA 0.024 80-90% NA NA PAAD NA NA boxplot CTC-366B18.2 NA chr5 75598482 75599380 - 899 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-366B18.2 NA 0.176 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-440L14.4 NA chr4 757022 757740 - 719 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-440L14.4 NA 0.059 70-80% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot AC007364.1 NA chr2 149767506 149859191 - 91686 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC007364.1 NA 0.012 90-100% Testis 4.55330154 NA NA NA boxplot RP11-626G11.1 NA chr16 19065991 19066694 + 704 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-626G11.1 NA 0.012 50-60% NA NA PAAD NA NA boxplot KRT18P17 keratin 18 pseudogene 17 chr3 12787393 12788671 - 1279 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KRT18P17 NA 0.059 70-80% Testis 2.90638418 Breast_cancer,HCC,PAAD NA NA boxplot RP11-10J21.3 NA chr8 141254565 141256817 + 2253 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-10J21.3 NA 0.529 10-20% NA NA CRC,HCC,Normal,PAAD CHD(down),HCC(up) NA boxplot ARPC3P5 actin related protein 2/3 complex subunit 3 pseudogene 5 chr6 15934782 15935315 + 534 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ARPC3P5 exo_circ_025802,exo_circ_052731,exo_circ_049757 0.976 0-10% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot LINC01578 long intergenic non-protein coding RNA 1578 chr15 92882707 92899701 + 16995 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01578 NA 1 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up) NA boxplot RP11-255G12.2 NA chr14 51344914 51385603 - 40690 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-255G12.2 NA 0.012 20-30% Skin 1.990445693 Breast_cancer,HCC NA NA boxplot RP1-209B5.2 NA chr6 131184325 131185486 - 1162 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-209B5.2 NA 0.047 50-60% Lung 4.906892038 Breast_cancer,HCC,Normal NA NA boxplot RP11-1110J8.1 NA chr12 29658376 29658798 - 423 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1110J8.1 NA 0.012 90-100% NA NA Breast_cancer,CRC NA NA boxplot CTC-453G23.7 NA chr19 48198107 48199720 - 1614 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-453G23.7 NA 0.035 40-50% NA NA Breast_cancer,Normal,PAAD NA NA boxplot RP11-332L8.1 NA chr1 197222222 197223255 + 1034 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-332L8.1 NA 0.012 50-60% Testis 1.184204898 NA NA NA boxplot PSMD10P2 proteasome 26S subunit, non-ATPase, 10 pseudogene 2 chr3 186760693 186762050 + 1358 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PSMD10P2 NA 0.024 40-50% Testis 4.322908943 Breast_cancer,PAAD NA NA boxplot RP4-683M8.2 NA chr1 48050659 48091736 + 41078 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-683M8.2 exo_circ_009579 0.071 10-20% Testis 3.846600874 Breast_cancer,CRC,HCC,Normal NA NA boxplot RP11-229P13.22 NA chr9 137057663 137062461 + 4799 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-229P13.22 NA 0.035 90-100% NA NA HCC NA NA boxplot ZSCAN16-AS1 ZSCAN16 antisense RNA 1 chr6 28121795 28137293 - 15499 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ZSCAN16-AS1 NA 0.965 0-10% NA NA CHD,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-115C21.2 NA chr8 6403551 6407142 - 3592 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-115C21.2 NA 0.471 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-65L3.2 NA chr2 178548884 178550681 + 1798 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-65L3.2 exo_circ_038243,exo_circ_048565 0.271 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot PNRC2P1 proline rich nuclear receptor coactivator 2 pseudogene 1 chr1 117778087 117778506 - 420 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PNRC2P1 NA 0.824 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot ZEB1-AS1 ZEB1 antisense RNA 1 chr10 31206278 31320447 - 114170 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ZEB1-AS1 NA 0.729 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up) NA boxplot AC074212.6 NA chr19 45767796 45772504 + 4709 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC074212.6 NA 0.176 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-384C4.2 NA chr1 212357418 212358353 + 936 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-384C4.2 NA 0.047 80-90% NA NA CRC,Normal NA NA boxplot RP11-1017G21.3 NA chr14 101969364 101969601 - 238 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1017G21.3 NA 0.012 10-20% Brain 4.906892038 HCC NA NA boxplot AC011380.9 NA chr5 140562443 140592123 - 29681 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC011380.9 NA 0.318 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot AKR1B1P2 aldo-keto reductase family 1, member B1 pseudogene 2 chr3 74135959 74136892 + 934 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AKR1B1P2 NA 0.012 70-80% NA NA CRC NA NA boxplot RP11-290D2.5 NA chr13 45263690 45263915 + 226 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-290D2.5 NA 0.047 60-70% NA NA CRC,PAAD NA NA boxplot RP11-230C9.4 NA chr6 156774217 156774662 - 446 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-230C9.4 NA 0.012 40-50% NA NA NA NA NA boxplot RP11-329N22.1 NA chr1 38474875 38496034 + 21160 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-329N22.1 NA 0.059 60-70% Testis 4.481712254 Breast_cancer,CRC,Normal NA NA boxplot TMEM5-AS1 TMEM5 antisense RNA 1 chr12 63808845 63822156 - 13312 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TMEM5-AS1 NA 0.071 0-10% Testis 1.722886011 Normal,PAAD NA NA boxplot RP11-14D22.1 NA chr3 64445231 64454832 + 9602 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-14D22.1 NA 0.012 0-10% Testis 4.906892038 Normal NA NA boxplot RP11-192N10.2 NA chr10 29697935 29698174 + 240 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-192N10.2 exo_circ_045109 0.388 70-80% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-220I1.5 NA chr9 37078813 37079776 - 964 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-220I1.5 NA 0.012 80-90% NA NA Breast_cancer,Normal NA NA boxplot RP11-230C9.2 NA chr6 156776360 156778422 - 2063 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-230C9.2 NA 0.376 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP4-564F22.5 NA chr20 38406011 38416797 - 10787 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-564F22.5 NA 0.106 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-553K23.2 NA chr3 139582928 139583593 - 666 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-553K23.2 NA 0.306 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot XXbac-BPG157A10.21 NA chr6 33246075 33246856 - 782 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=XXbac-BPG157A10.21 NA 0.071 40-50% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot RP11-219B4.3 NA chr8 85177522 85178150 - 629 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-219B4.3 NA 0.024 60-70% NA NA Breast_cancer,Normal NA NA boxplot LINC01423 long intergenic non-protein coding RNA 1423 chr21 38323635 38333421 - 9787 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01423 NA 0.082 80-90% NA NA CRC,HCC,Normal,PAAD NA NA boxplot DCAF13P1 DDB1 and CUL4 associated factor 13 pseudogene 1 chr7 106125371 106126700 + 1330 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DCAF13P1 NA 0.024 60-70% NA NA HCC,Normal NA NA boxplot RP4-597J3.1 NA chr1 63788721 63789304 - 584 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP4-597J3.1 NA 0.012 90-100% NA NA Normal,PAAD NA NA boxplot RP11-37N22.1 NA chr8 124192671 124247398 - 54728 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-37N22.1 NA 0.106 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot AC073326.3 NA chr7 110724159 110725825 - 1667 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC073326.3 exo_circ_033526,exo_circ_033528 0.047 50-60% NA NA HCC,Normal,PAAD NA NA boxplot CTC-321K16.4 NA chr5 135648584 135653935 - 5352 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-321K16.4 NA 0.012 20-30% Testis 4.235539481 Breast_cancer,Normal NA NA boxplot ADAM5 ADAM metallopeptidase domain 5 (pseudogene) chr8 39314591 39417378 + 102788 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ADAM5 NA 0.059 50-60% Testis 4.906892038 HCC,Normal NA NA boxplot RP11-1C8.6 NA chr8 103383078 103383854 - 777 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1C8.6 NA 0.024 40-50% NA NA CRC NA NA boxplot AC093484.4 NA chr17 16427474 16428719 + 1246 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC093484.4 NA 0.341 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RBM26-AS1 RBM26 antisense RNA 1 chr13 79406309 79424328 + 18020 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RBM26-AS1 NA 0.659 10-20% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(down) NA boxplot AC010894.3 NA chr2 174487389 174488386 + 998 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC010894.3 NA 0.106 60-70% Testis 1.516801343 CRC,HCC,Normal,PAAD NA NA boxplot CTC-518B2.12 NA chr19 51014374 51014734 + 361 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-518B2.12 NA 0.024 60-70% NA NA Normal,PAAD NA NA boxplot RP11-884K10.7 NA chr3 53858994 53861576 - 2583 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-884K10.7 NA 0.729 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),PAAD(down) NA boxplot EIF4A1P2 eukaryotic translation initiation factor 4A1 pseudogene 2 chrY 5337745 5338964 - 1220 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=EIF4A1P2 NA 0.871 40-50% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot CTD-2373N4.5 NA chr8 30596914 30597532 + 619 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2373N4.5 NA 0.035 60-70% Testis 1.225111846 Breast_cancer,HCC,Normal NA NA boxplot TNRC18P3 trinucleotide repeat containing 18 pseudogene 3 chr7 56991888 57009149 + 17262 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TNRC18P3 NA 0.224 90-100% Testis 4.848687066 Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot FAM172BP family with sequence similarity 172, member B pseudogene chr3 101521891 101522979 + 1089 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FAM172BP NA 0.129 20-30% Testis 3.083872087 CRC,HCC,Normal NA NA boxplot RP11-347I19.7 NA chr12 121800797 121803403 + 2607 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-347I19.7 NA 0.4 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot PTPN20CP protein tyrosine phosphatase, non-receptor type 20C, pseudogene chr10 48064308 48119455 - 55148 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PTPN20CP NA 0.2 40-50% Testis 1.320201349 CRC,HCC,Normal,PAAD NA NA boxplot RP11-77H9.8 NA chr16 8962706 8966990 + 4285 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-77H9.8 NA 0.341 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot TPRG1-AS1 TPRG1 antisense RNA 1 chr3 188941715 188947639 - 5925 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TPRG1-AS1 NA 0.365 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot UNC93B8 unc-93 homolog B8 pseudogene (C. elegans) chr4 8959628 8963981 + 4354 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=UNC93B8 NA 0.012 90-100% NA NA Breast_cancer,CRC NA NA boxplot RP11-212I21.3 NA chr16 55486618 55488777 + 2160 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-212I21.3 NA 0.035 90-100% NA NA HCC,PAAD NA NA boxplot AC079199.2 NA chr17 39839369 39839524 - 156 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC079199.2 NA 0.012 40-50% NA NA CRC NA NA boxplot RP11-27I1.4 NA chr9 120793551 120799570 + 6020 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-27I1.4 NA 0.706 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),HCC(down) NA boxplot AC012360.4 NA chr2 105324210 105330529 + 6320 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC012360.4 NA 0.035 40-50% NA NA HCC,Normal NA NA boxplot AC097724.3 NA chr2 28708953 28736205 - 27253 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC097724.3 NA 0.153 70-80% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot TERF1P2 telomeric repeat binding factor (NIMA-interacting) 1 pseudogene 2 chr18 14377546 14378757 - 1212 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TERF1P2 NA 0.318 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-439I14.1 NA chr16 64736788 64737280 + 493 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-439I14.1 NA 0.012 90-100% Testis 3.69621516 Normal NA NA boxplot RP11-486O12.2 NA chr12 123575891 123585115 - 9225 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-486O12.2 NA 0.306 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-439L18.1 NA chr6 142950211 142956646 + 6436 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-439L18.1 exo_circ_033407 0.165 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-77P16.4 NA chr3 130112550 130120579 + 8030 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-77P16.4 NA 0.365 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot PDXDC2P pyridoxal-dependent decarboxylase domain containing 2, pseudogene chr16 70010751 70065945 - 55195 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PDXDC2P NA 0.988 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up),CRC(up),PAAD(up) NA boxplot RP11-132M7.2 NA chr6 84689292 84689429 - 138 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-132M7.2 NA 0.012 70-80% Artery 2.269528054 NA NA NA boxplot HMGN1P18 high mobility group nucleosome binding domain 1 pseudogene 18 chr7 121050927 121051203 + 277 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HMGN1P18 NA 0.435 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP1-193H18.2 NA chr17 69551358 69553861 + 2504 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-193H18.2 NA 0.624 10-20% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(down),PAAD(down) NA boxplot CTC-435M10.12 NA chr19 41373971 41374419 + 449 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-435M10.12 NA 0.059 50-60% NA NA Breast_cancer,CRC,PAAD NA NA boxplot SZT2-AS1 SZT2 antisense RNA 1 chr1 43447776 43448644 - 869 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SZT2-AS1 NA 0.176 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CTD-2302E22.4 NA chr14 63543569 63544664 + 1096 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2302E22.4 NA 0.035 60-70% Testis 1.172746806 HCC,Normal NA NA boxplot RP11-556O5.6 NA chr8 8188535 8189195 - 661 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-556O5.6 NA 0.024 40-50% NA NA Normal NA NA boxplot RP11-305O4.2 NA chr3 136055184 136055764 + 581 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-305O4.2 NA 0.024 40-50% NA NA CRC NA NA boxplot RP11-834C11.6 NA chr12 54082118 54102693 + 20576 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-834C11.6 NA 0.059 10-20% NA NA Breast_cancer,CRC,Normal,PAAD NA NA boxplot AF121898.3 NA chr8 87540835 87755718 - 214884 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AF121898.3 NA 0.012 50-60% Testis 4.906892038 Breast_cancer NA NA boxplot FAM13A-AS1 FAM13A antisense RNA 1 chr4 88709789 88730103 + 20315 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FAM13A-AS1 NA 0.506 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CRC(up) NA boxplot RP5-867C24.1 NA chr17 47159191 47159993 - 803 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-867C24.1 NA 0.141 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-629G13.1 NA chr11 112959279 112963460 - 4182 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-629G13.1 NA 0.141 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-45M22.3 NA chr17 17167946 17185554 - 17609 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-45M22.3 NA 0.024 90-100% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot PSAT1P3 phosphoserine aminotransferase 1 pseudogene 3 chr1 79054945 79056055 - 1111 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PSAT1P3 NA 0.035 10-20% NA NA CRC,Normal,PAAD NA NA boxplot TRAF3IP2-AS1 TRAF3IP2 antisense RNA 1 chr6 111483511 111598302 + 114792 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TRAF3IP2-AS1 NA 0.918 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down) NA boxplot ALDH7A1P1 aldehyde dehydrogenase 7 family member A1 pseudogene 1 chr5 77290268 77291800 + 1533 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ALDH7A1P1 NA 0.2 20-30% NA NA Breast_cancer,HCC,Normal,PAAD NA NA boxplot RP11-568J23.4 NA chr16 85743287 85744225 + 939 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-568J23.4 NA 0.012 70-80% Testis 4.906892038 NA NA NA boxplot RP11-780K2.1 NA chr12 113932569 113937255 + 4687 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-780K2.1 NA 0.059 60-70% Brain 4.906892038 CRC,HCC,Normal NA NA boxplot AC108448.2 NA chr11 3084393 3085443 - 1051 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC108448.2 NA 0.082 50-60% NA NA Breast_cancer,CRC,HCC,PAAD NA NA boxplot RP3-431P23.5 NA chr6 167795530 167798248 + 2719 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-431P23.5 NA 0.212 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP5-1185I7.1 NA chr7 77990384 77995171 + 4788 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-1185I7.1 NA 0.047 10-20% Vagina 2.479851573 Breast_cancer,Normal,PAAD NA NA boxplot PPP1R2P1 protein phosphatase 1 regulatory inhibitor subunit 2 pseudogene 1 chr6 32879171 32879848 - 678 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PPP1R2P1 NA 0.094 30-40% NA NA Breast_cancer,Normal NA NA boxplot RP11-456P18.2 NA chr1 161890833 161892196 + 1364 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-456P18.2 exo_circ_036115 0.259 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-857B24.5 NA chr14 44898908 44911863 - 12956 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-857B24.5 NA 0.024 20-30% Testis 1.548712985 HCC,Normal,PAAD NA NA boxplot RP11-377K22.2 NA chr1 56619409 56619549 - 141 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-377K22.2 NA 0.224 90-100% NA NA CRC,HCC,Normal,PAAD NA NA boxplot SEC62-AS1 SEC62 antisense RNA 1 chr3 169978536 169985715 - 7180 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=SEC62-AS1 exo_circ_031627 0.024 80-90% NA NA Breast_cancer,CRC,Normal NA NA boxplot OR2I1P olfactory receptor family 2 subfamily I member 1 pseudogene chr6 29553219 29554166 + 948 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=OR2I1P NA 0.212 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot HNRNPCP1 heterogeneous nuclear ribonucleoprotein C pseudogene 1 chr14 58521223 58521988 + 766 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HNRNPCP1 NA 0.624 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CRC(up),PAAD(up) NA boxplot RP11-79P5.3 NA chr5 73382384 73410509 + 28126 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-79P5.3 NA 0.012 90-100% Testis 4.505811271 HCC,Normal NA NA boxplot AC008280.1 NA chr2 54029552 54030682 - 1131 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC008280.1 NA 0.012 70-80% NA NA Normal NA NA boxplot BCRP8 breakpoint cluster region pseudogene 8 chr22 23179918 23180172 - 255 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=BCRP8 NA 0.024 60-70% NA NA Breast_cancer,CRC,Normal NA NA boxplot RP11-1033H12.1 NA chr14 52111122 52129625 - 18504 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1033H12.1 NA 0.129 30-40% Testis 4.906892038 Breast_cancer,HCC,Normal,PAAD NA NA boxplot MYO16-AS1 MYO16 antisense RNA 1 chr13 109163902 109201483 - 37582 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MYO16-AS1 NA 0.035 50-60% Lung 3.21602625 Breast_cancer,HCC,PAAD NA NA boxplot RP3-486I3.5 NA chr6 116244187 116244728 - 542 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP3-486I3.5 NA 0.141 60-70% NA NA HCC,Normal,PAAD NA NA boxplot RP11-332O19.2 NA chr10 103125017 103125416 - 400 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-332O19.2 NA 0.141 20-30% NA NA CRC,Normal,PAAD NA NA boxplot LINC00555 long intergenic non-protein coding RNA 555 chr13 102589372 102589813 - 442 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00555 NA 0.012 90-100% NA NA Breast_cancer,Normal NA NA boxplot RP11-1267H10.4 NA chr4 68704600 68712498 - 7899 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1267H10.4 NA 0.012 80-90% NA NA HCC NA NA boxplot RP11-977G19.14 NA chr12 56267793 56270104 - 2312 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-977G19.14 NA 0.012 60-70% NA NA Normal NA NA boxplot RP11-463H12.2 NA chr4 54943630 54956818 + 13189 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-463H12.2 NA 0.012 20-30% Testis 4.906892038 HCC NA NA boxplot RP11-799D4.1 NA chr17 35190961 35191702 + 742 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-799D4.1 NA 0.047 50-60% Testis 3.193197863 Normal NA NA boxplot PCAT2 prostate cancer associated transcript 2 (non-protein coding) chr8 127072694 127082221 - 9528 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PCAT2 NA 0.012 10-20% Testis 4.906892038 NA NA NA boxplot KMT2E-AS1 KMT2E antisense RNA 1 (head to head) chr7 105013425 105014321 - 897 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=KMT2E-AS1 NA 0.553 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CTD-2021H9.2 NA chr12 71034122 71104526 - 70405 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2021H9.2 NA 0.035 80-90% Testis 4.906892038 HCC NA NA boxplot HID1-AS1 HID1 antisense RNA 1 chr17 74970704 74975728 + 5025 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HID1-AS1 NA 0.282 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot AC007163.6 NA chr2 200780495 200812170 - 31676 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC007163.6 NA 0.576 20-30% Testis 4.215174528 CRC,HCC,Normal,PAAD NA NA boxplot RP11-64K12.8 NA chr15 40464193 40466726 - 2534 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-64K12.8 NA 0.118 70-80% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot AC021218.2 NA chr7 155962632 155966343 + 3712 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC021218.2 NA 0.059 40-50% Small Intestine 2.62788868 Breast_cancer,HCC,PAAD NA NA boxplot RP11-348F1.3 NA chrX 51356944 51396462 - 39519 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-348F1.3 NA 0.2 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot TSSC1-IT1 TSSC1 intronic transcript 1 chr2 3298341 3301465 - 3125 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TSSC1-IT1 exo_circ_036893 0.059 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RPS20P21 ribosomal protein S20 pseudogene 21 chr8 73982125 73982467 + 343 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPS20P21 NA 0.188 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-298I3.6 NA chr14 23023083 23024217 - 1135 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-298I3.6 NA 0.294 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-166B2.3 NA chr16 11881075 11882569 - 1495 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-166B2.3 NA 0.047 50-60% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot HMGN1P32 high mobility group nucleosome binding domain 1 pseudogene 32 chr19 53767971 53768553 - 583 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HMGN1P32 NA 0.012 0-10% NA NA Normal NA NA boxplot CYP2T1P cytochrome P450 family 2 subfamily T member 1, pseudogene chr19 40808525 40811390 - 2866 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CYP2T1P NA 0.482 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-637O11.2 NA chr3 168288553 168291228 + 2676 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-637O11.2 NA 0.012 30-40% NA NA PAAD NA NA boxplot LINC01600 long intergenic non-protein coding RNA 1600 chr6 2621913 2634603 - 12691 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01600 exo_circ_055188 0.071 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP5-1142A6.9 NA chr16 88718615 88720459 + 1845 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-1142A6.9 NA 0.4 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-431K24.3 NA chr1 8202429 8215210 + 12782 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-431K24.3 NA 0.024 80-90% Liver 3.204775366 Breast_cancer,PAAD NA NA boxplot IFIT1P1 interferon induced protein with tetratricopeptide repeats 1 pseudogene 1 chr13 32384660 32386108 + 1449 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=IFIT1P1 NA 0.035 40-50% NA NA Breast_cancer,Normal NA NA boxplot LL22NC03-N95F10.1 NA chr22 24691122 24696003 - 4882 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LL22NC03-N95F10.1 NA 0.141 60-70% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot TPTE2P5 transmembrane phosphoinositide 3-phosphatase and tensin homolog 2 pseudogene 5 chr13 40822296 40921749 - 99454 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TPTE2P5 NA 0.929 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down) NA boxplot RP1-71H19.2 NA chr6 57493855 57497691 + 3837 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-71H19.2 NA 0.024 30-40% Prostate 4.906892038 PAAD NA NA boxplot RP11-80H5.5 NA chr10 89644603 89645223 - 621 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-80H5.5 NA 0.212 80-90% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot CTC-436K13.1 NA chr5 158175396 158200016 + 24621 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTC-436K13.1 NA 0.012 50-60% NA NA PAAD NA NA boxplot RP11-702B10.2 NA chr11 128180427 128183554 + 3128 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-702B10.2 NA 0.106 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot NBPF8 neuroblastoma breakpoint family member 8 chr1 120436353 120467739 + 31387 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NBPF8 NA 1 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up),CRC(up),HCC(up),PAAD(up) NA boxplot CTD-2410N18.3 NA chr5 134226410 134227827 + 1418 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2410N18.3 NA 0.153 50-60% NA NA Breast_cancer,CRC,Normal,PAAD NA NA boxplot RPS20P20 ribosomal protein S20 pseudogene 20 chr8 71895991 71896330 + 340 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPS20P20 NA 0.035 50-60% NA NA CRC,PAAD NA NA boxplot RP11-564A8.8 NA chr1 206905928 206906393 + 466 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-564A8.8 NA 0.012 80-90% Spleen 2.617183099 NA NA NA boxplot RP11-465B22.3 NA chr1 1059734 1069355 + 9622 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-465B22.3 NA 0.094 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot LINC01082 long intergenic non-protein coding RNA 1082 chr16 86196181 86199720 + 3540 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01082 NA 0.141 50-60% Testis 2.493318688 HCC,Normal,PAAD NA NA boxplot RP11-566K19.11 NA chr15 22360639 22360918 + 280 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-566K19.11 NA 0.059 10-20% NA NA CRC,Normal,PAAD NA NA boxplot RP11-500C12.1 NA chr15 77484275 77485606 - 1332 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-500C12.1 exo_circ_037619,exo_circ_009261 0.353 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-22N19.2 NA chr7 106285480 106286326 + 847 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-22N19.2 NA 0.282 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-434P11.1 NA chr2 73761269 73761781 - 513 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-434P11.1 NA 0.106 20-30% NA NA CRC,HCC,Normal NA NA boxplot RP11-1399P15.1 NA chr2 87477495 87478034 - 540 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1399P15.1 NA 0.553 10-20% NA NA CRC,HCC,Normal,PAAD CHD(down),CRC(down) NA boxplot RP5-1056L3.1 NA chr1 19591802 19596832 - 5031 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-1056L3.1 NA 0.012 90-100% Testis 4.602353331 Breast_cancer,CRC NA NA boxplot RP5-1021I20.6 NA chr14 73905267 73905636 + 370 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-1021I20.6 NA 0.047 40-50% NA NA Normal NA NA boxplot RP11-472M19.2 NA chr6 56844002 56864078 + 20077 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-472M19.2 NA 0.012 80-90% Testis 1.547505692 NA NA NA boxplot RPL24P8 ribosomal protein L24 pseudogene 8 chr9 70217195 70217668 + 474 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL24P8 NA 1 0-10% NA NA CHD,CRC,HCC,Normal,PAAD CHD(down),CRC(down),PAAD(down) NA boxplot PPP4R1L protein phosphatase 4 regulatory subunit 1 like (pseudogene) chr20 58228940 58309439 - 80500 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PPP4R1L exo_circ_040675,exo_circ_058059,exo_circ_006618,exo_circ_031385,exo_circ_052266 0.941 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(down) NA boxplot AC005534.8 NA chr7 156654185 156657693 - 3509 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC005534.8 exo_circ_039153,exo_circ_041218 0.047 60-70% NA NA Normal,PAAD NA NA boxplot RP13-270P17.1 NA chr18 3255436 3261850 - 6415 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP13-270P17.1 NA 0.929 0-10% Testis 2.481247371 CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP1-274L7.4 NA chrX 130445085 130524257 - 79173 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-274L7.4 NA 0.035 80-90% NA NA Breast_cancer,CRC,Normal NA NA boxplot COLCA1 colorectal cancer associated 1 chr11 111290787 111305045 - 14259 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=COLCA1 NA 0.188 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-474P2.2 NA chr12 46371463 46373778 + 2316 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-474P2.2 exo_circ_051058 0.071 40-50% Testis 3.161528387 Breast_cancer,HCC,Normal,PAAD NA NA boxplot RP11-159H10.3 NA chr8 69834111 69854971 + 20861 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-159H10.3 NA 0.176 50-60% NA NA CRC,HCC,Normal,PAAD NA NA boxplot LINC01123 long intergenic non-protein coding RNA 1123 chr2 109987063 109996140 + 9078 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01123 NA 0.729 10-20% NA NA CHD,CRC,HCC,Normal,PAAD CHD(up),CRC(up),HCC(up),PAAD(up) NA boxplot RP11-12D24.10 NA chr9 5351796 5352410 - 615 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-12D24.10 NA 0.035 20-30% NA NA HCC,Normal,PAAD NA NA boxplot ECEL1P1 endothelin converting enzyme-like 1, pseudogene 1 chr2 232415818 232419816 - 3999 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ECEL1P1 NA 0.012 70-80% NA NA Breast_cancer NA NA boxplot MTOR-AS1 MTOR antisense RNA 1 chr1 11143898 11149537 + 5640 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=MTOR-AS1 NA 0.035 30-40% NA NA HCC,PAAD NA NA boxplot AC093690.1 NA chr2 28307691 28310459 - 2769 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC093690.1 NA 0.059 40-50% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot RP11-275I4.2 NA chr15 38671847 38689191 + 17345 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-275I4.2 NA 0.165 30-40% NA NA Breast_cancer,CRC,HCC,Normal NA NA boxplot RP13-895J2.4 NA chr12 132279256 132280900 - 1645 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP13-895J2.4 NA 0.012 10-20% NA NA Breast_cancer,Normal NA NA boxplot RP11-383B24.3 NA chr10 74744386 74744707 - 322 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-383B24.3 NA 0.012 30-40% NA NA Breast_cancer,HCC NA NA boxplot AC087501.1 NA chr17 9452197 9470014 + 17818 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC087501.1 NA 0.012 90-100% Testis 2.422743598 Breast_cancer,HCC,Normal NA NA boxplot CTB-73N10.1 NA chr5 145429868 145451099 + 21232 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTB-73N10.1 NA 0.047 70-80% Testis 4.113549618 HCC,Normal NA NA boxplot RP11-230B22.1 NA chr1 62688482 62710694 + 22213 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-230B22.1 NA 0.153 30-40% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP11-650L12.2 NA chr15 78589123 78591276 - 2154 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-650L12.2 NA 0.059 80-90% NA NA CRC,HCC,PAAD NA NA boxplot RP11-389C8.2 NA chr5 72439903 72442387 - 2485 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-389C8.2 NA 0.929 0-10% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot LINC01220 long intergenic non-protein coding RNA 1220 chr14 75294404 75296638 + 2235 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC01220 NA 0.141 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot CTD-2288O8.1 NA chr5 52675193 52788026 - 112834 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2288O8.1 NA 0.235 40-50% Testis 3.523074987 CRC,HCC,Normal,PAAD NA NA boxplot RP11-390P2.2 NA chr6 138650226 138650973 - 748 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-390P2.2 NA 0.047 40-50% Skin 2.757469235 Breast_cancer,CRC,Normal,PAAD NA NA boxplot RP11-688I9.4 NA chr11 126920188 126940659 - 20472 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-688I9.4 NA 0.024 40-50% Testis 4.68500804 PAAD NA NA boxplot HOXB-AS3 HOXB cluster antisense RNA 3 chr17 48549630 48606414 + 56785 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HOXB-AS3 NA 0.353 20-30% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot AC093627.7 NA chr7 70972 95683 - 24712 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC093627.7 NA 0.012 80-90% NA NA CRC,Normal NA NA boxplot AC011893.3 NA chr2 135820191 135823087 + 2897 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC011893.3 NA 0.388 10-20% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-458D21.1 NA chr1 146052566 146061948 + 9383 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-458D21.1 NA 0.141 20-30% NA NA CRC,HCC,Normal,PAAD NA NA boxplot OR51K1P olfactory receptor family 51 subfamily K member 1 pseudogene chr11 5430653 5431602 - 950 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=OR51K1P NA 0.024 10-20% NA NA CRC,PAAD NA NA boxplot RP11-348J12.2 NA chr10 93059663 93060426 - 764 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-348J12.2 NA 0.012 60-70% Testis 4.721938229 HCC NA NA boxplot RP11-973D8.4 NA chr12 55966838 55967474 - 637 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-973D8.4 NA 0.329 10-20% NA NA Breast_cancer,CRC,HCC,Normal,PAAD CHD(down),CRC(down),HCC(down),PAAD(down) NA boxplot RPL23AP74 ribosomal protein L23a pseudogene 74 chr17 61069871 61070341 + 471 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPL23AP74 exo_circ_057614 1 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up),HCC(up) NA boxplot GAS5-AS1 GAS5 antisense RNA 1 chr1 173863248 173863941 + 694 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GAS5-AS1 NA 0.188 50-60% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot PLEKHA3P1 pleckstrin homology domain containing A3 pseudogene 1 chr19 41521043 41521989 - 947 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=PLEKHA3P1 NA 0.541 20-30% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot TMSB4XP2 thymosin beta 4, X-linked pseudogene 2 chr2 3617548 3617757 - 210 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TMSB4XP2 NA 0.012 80-90% Cervix 4.906892038 CHD,CRC,Normal NA NA boxplot RP11-468O2.1 NA chr8 123288355 123290503 + 2149 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-468O2.1 NA 0.012 80-90% NA NA CRC NA NA boxplot RP11-1415C14.3 NA chr5 70219918 70258930 - 39013 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1415C14.3 NA 0.906 0-10% NA NA CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-74M13.5 NA chr12 56981211 56985960 - 4750 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-74M13.5 exo_circ_004987 0.165 40-50% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-470P21.2 NA chr9 69472466 69494513 + 22048 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-470P21.2 NA 0.012 80-90% Breast 3.316867378 CRC NA NA boxplot HIGD1AP17 HIG1 hypoxia inducible domain family member 1A pseudogene 17 chr14 30964347 30964622 + 276 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HIGD1AP17 NA 0.024 90-100% NA NA HCC,PAAD NA NA boxplot CH17-262A2.1 NA chr4 149738 150317 + 580 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CH17-262A2.1 NA 0.012 90-100% NA NA PAAD NA NA boxplot RP5-1039K5.17 NA chr22 37950965 37951778 + 814 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP5-1039K5.17 NA 0.024 50-60% NA NA Breast_cancer,Normal,PAAD NA NA boxplot TOP1P1 topoisomerase (DNA) I pseudogene 1 chr1 171345105 171345307 - 203 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=TOP1P1 NA 0.047 60-70% NA NA CHD NA NA boxplot HAGLR HOXD antisense growth-associated long non-coding RNA chr2 176173195 176188958 - 15764 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=HAGLR NA 0.718 10-20% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CRC(down) NA boxplot RP11-618N24.1 NA chr15 36613474 36614198 + 725 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-618N24.1 NA 0.094 50-60% Heart 4.906892038 Breast_cancer,HCC,Normal,PAAD NA NA boxplot RP11-49K24.4 NA chr18 47077361 47091280 - 13920 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-49K24.4 exo_circ_034696,exo_circ_005561 0.235 30-40% NA NA CRC,HCC,Normal,PAAD NA NA boxplot RP11-600F24.7 NA chr14 103525010 103529072 - 4063 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-600F24.7 NA 0.2 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot ZNF833P zinc finger protein 833, pseudogene chr19 11680944 11686259 + 5316 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=ZNF833P NA 0.306 40-50% NA NA CHD,CRC,HCC,Normal,PAAD NA NA boxplot UPF3AP1 UPF3A pseudogene 1 chr17 16745636 16746761 - 1126 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=UPF3AP1 NA 0.988 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD CHD(up) NA boxplot POLR2J4 polymerase (RNA) II (DNA directed) polypeptide J4, pseudogene chr7 44013562 44019170 - 5609 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=POLR2J4 exo_circ_033596 0.988 0-10% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-244O19.1 NA chr9 121815674 121819452 - 3779 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-244O19.1 NA 0.635 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RP13-714J12.1 NA chr12 132424504 132425208 - 705 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP13-714J12.1 NA 0.035 30-40% NA NA Normal,PAAD NA NA boxplot RP11-587D21.4 NA chr11 27696312 27877648 - 181337 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-587D21.4 NA 0.024 10-20% Brain 4.906892038 PAAD NA NA boxplot GS1-293C5.1 NA chr7 95416108 95416462 + 355 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=GS1-293C5.1 NA 0.012 90-100% NA NA NA NA NA boxplot LINC00609 long intergenic non-protein coding RNA 609 chr14 36070427 36165288 + 94862 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=LINC00609 NA 0.012 30-40% NA NA NA NA NA boxplot RP11-1026M7.3 NA chr5 177801204 177803344 - 2141 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1026M7.3 NA 0.012 40-50% Testis 4.906892038 CRC,Normal NA NA boxplot RP13-895J2.7 NA chr12 132329850 132331575 + 1726 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP13-895J2.7 NA 0.012 90-100% Brain 3.187503789 Breast_cancer NA NA boxplot RP11-1018J11.1 NA chr12 16989126 16989936 + 811 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-1018J11.1 NA 0.141 70-80% NA NA HCC,Normal,PAAD NA NA boxplot RBM17P4 RNA binding motif protein 17 pseudogene 4 chr15 35298249 35299440 - 1192 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RBM17P4 exo_circ_034361,exo_circ_057102,exo_circ_057103 0.071 80-90% NA NA CRC,Normal NA NA boxplot RP11-46F15.2 NA chr1 3623190 3624743 - 1554 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-46F15.2 NA 0.071 80-90% NA NA Breast_cancer,CRC,Normal NA NA boxplot B4GALT4-AS1 B4GALT4 antisense RNA 1 chr3 119226486 119290666 + 64181 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=B4GALT4-AS1 NA 0.035 60-70% Testis 4.571779345 HCC,Normal NA NA boxplot RPSAP4 ribosomal protein SA pseudogene 4 chr14 94726288 94727175 + 888 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPSAP4 NA 0.176 70-80% NA NA Breast_cancer,CHD,CRC,HCC,Normal,PAAD NA NA boxplot RP11-632K20.6 NA chr15 32489267 32491586 - 2320 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-632K20.6 NA 0.471 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot OR52H2P olfactory receptor family 52 subfamily H member 2 pseudogene chr11 5551662 5552563 - 902 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=OR52H2P NA 0.012 60-70% NA NA CRC NA NA boxplot RP11-175K6.1 NA chr5 159100483 159117478 + 16996 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-175K6.1 NA 0.353 50-60% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot RPS10P16 ribosomal protein S10 pseudogene 16 chr8 117523271 117524061 - 791 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RPS10P16 NA 0.059 80-90% NA NA Breast_cancer,CRC,Normal,PAAD NA NA boxplot AC004158.3 NA chr16 72425948 72533892 + 107945 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC004158.3 NA 0.024 40-50% Brain 4.699554663 Breast_cancer,Normal NA NA boxplot DUXB double homeobox B chr16 75694434 75700152 - 5719 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=DUXB NA 0.035 50-60% NA NA CRC,HCC,PAAD NA NA boxplot RP11-401O9.4 NA chr17 10291820 10317926 + 26107 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-401O9.4 NA 0.059 60-70% NA NA HCC,Normal,PAAD NA NA boxplot RP11-147L13.13 NA chr17 68133201 68135935 + 2735 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-147L13.13 NA 0.682 20-30% NA NA Breast_cancer,CRC,HCC,Normal,PAAD PAAD(up) NA boxplot RP11-435O5.7 NA chr9 95406990 95407662 - 673 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-435O5.7 NA 0.012 30-40% NA NA NA NA NA boxplot RP11-820I16.1 NA chr18 11910634 11914344 - 3711 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-820I16.1 NA 0.035 40-50% Testis 1.67402664 Normal,PAAD NA NA boxplot C20orf78 chromosome 20 open reading frame 78 chr20 18809728 18830153 - 20426 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=C20orf78 NA 0.012 30-40% Testis 4.906892038 HCC NA NA boxplot AC015849.14 NA chr17 35861093 35861566 - 474 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=AC015849.14 NA 0.059 90-100% NA NA CRC,HCC,Normal NA NA boxplot CTD-2517O10.6 NA chr5 34837549 34839278 - 1730 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTD-2517O10.6 NA 0.176 60-70% NA NA CRC,HCC,Normal,PAAD NA NA boxplot FEM1AP2 fem-1 homolog a (C. elegans) pseudogene 2 chr18 14391913 14393909 - 1997 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=FEM1AP2 NA 0.012 90-100% Thyroid 4.017492344 Breast_cancer,Normal NA NA boxplot RP1-69D17.4 NA chr6 129526626 129552587 - 25962 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP1-69D17.4 exo_circ_055082,exo_circ_027804,exo_circ_035560,exo_circ_049707,exo_circ_020857,exo_circ_006397 0.894 0-10% Testis 1.996715529 Breast_cancer,CRC,HCC,Normal,PAAD CHD(down) NA boxplot RP11-230F18.5 NA chr13 113527260 113530621 + 3362 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=RP11-230F18.5 NA 0.224 40-50% NA NA Breast_cancer,CRC,HCC,Normal,PAAD NA NA boxplot NT5C3AP1 5'-nucleotidase, cytosolic IIIA pseudogene 1 chr4 117574512 117576174 - 1663 long noncoding RNA http://www.genecards.org/cgi-bin/carddisp.pl?gene=NT5C3AP1 exo_circ_049192 0.918 10-20% NA NA CHD,CRC,HCC,Normal,PAAD CHD(down),HCC(up) NA boxplot