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G98
G98-V2
G98-V2.5
TZ30
ZN016
ZN016-V2
XiaBao II
IT97K-499-35
G323
G323-V1.5
CB5_2
Sanzi
Suvita2
UCR779
A147
T2T
JBrowse
G98
G98-V2
G98-V2.5
TZ30
ZN016
ZN016-V2
XiaBao II
IT97K-499-35
G323
G323-V1.5
CB5-2
Sanzi
Suvita2
UCR779
A147
T2T
Search
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Tools
BLAST Search
Sequences Fetch
Multiple Sequences Fetch
Pairwise Sequence Alignment
Multiple Sequence Alignment
Clustal Omega
GO Enrichment
KEGG Enrichment
Primer designer
Synteny
SNP Data
Genotype
Summary
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About
Pairwise Sequence Alignment
Enter type :
PROTEIN
DNA
Sequences A:
Sequences B:
e.g.,
Example
Output format:
EMBOSS multiple
FASTA multiple
MSF multiple
SRS multiple
EMBOSS pairwise
FASTA pairwise
FASTA pairwise marking differences
FASTA pairwise differences only
FASTA pairwise simple
FASTA pairwise simple with comments
SRS pairwise
Pairwise scores only
Matrix:
End Gap Penalty:
true
false
Gap open:
100
50
25
20
15
10
5
1
End Gap Open:
100
50
25
20
15
10
5
1
Gap Extend:
0.0005
0.001
0.05
0.1
0.2
0.4
0.5
0.6
0.8
1.0
5.0
10.0
End Gap Extend:
0.0005
0.001
0.05
0.1
0.2
0.4
0.5
0.6
0.8
1.0
5.0
10.0
Run
Reset
Result:
1